Structure

Physi-Chem Properties

Molecular Weight:  280.2
Volume:  306.573
LogP:  3.327
LogD:  2.33
LogS:  -3.539
# Rotatable Bonds:  3
TPSA:  46.53
# H-Bond Aceptor:  3
# H-Bond Donor:  1
# Rings:  2
# Heavy Atoms:  3

MedChem Properties

QED Drug-Likeness Score:  0.622
Synthetic Accessibility Score:  4.368
Fsp3:  0.824
Lipinski Rule-of-5:  Accepted
Pfizer Rule:  Rejected
GSK Rule:  Accepted
BMS Rule:  0
Golden Triangle Rule:  Accepted
Chelating Alert:  0
PAINS Alert:  0

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

Caco-2 Permeability:  -4.636
MDCK Permeability:  1.8949776858789846e-05
Pgp-inhibitor:  0.694
Pgp-substrate:  0.192
Human Intestinal Absorption (HIA):  0.005
20% Bioavailability (F20%):  0.737
30% Bioavailability (F30%):  0.411

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):  0.273
Plasma Protein Binding (PPB):  89.58720397949219%
Volume Distribution (VD):  1.554
Pgp-substrate:  15.954669952392578%

ADMET: Metabolism

CYP1A2-inhibitor:  0.075
CYP1A2-substrate:  0.153
CYP2C19-inhibitor:  0.064
CYP2C19-substrate:  0.837
CYP2C9-inhibitor:  0.122
CYP2C9-substrate:  0.515
CYP2D6-inhibitor:  0.016
CYP2D6-substrate:  0.259
CYP3A4-inhibitor:  0.153
CYP3A4-substrate:  0.356

ADMET: Excretion

Clearance (CL):  5.968
Half-life (T1/2):  0.527

ADMET: Toxicity

hERG Blockers:  0.03
Human Hepatotoxicity (H-HT):  0.457
Drug-inuced Liver Injury (DILI):  0.121
AMES Toxicity:  0.051
Rat Oral Acute Toxicity:  0.958
Maximum Recommended Daily Dose:  0.903
Skin Sensitization:  0.263
Carcinogencity:  0.135
Eye Corrosion:  0.139
Eye Irritation:  0.693
Respiratory Toxicity:  0.966

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs  

  Natural Product: NPC283619

Natural Product ID:  NPC283619
Common Name*:   Junceol A
IUPAC Name:   2-[(2R,4aR,5R,8S)-5-hydroxy-4a,8-dimethyl-3,4,5,6,7,8-hexahydro-2H-naphthalen-2-yl]propan-2-yl acetate
Synonyms:  
Standard InCHIKey:  FORUHHDUOITCNL-BYMSMCERSA-N
Standard InCHI:  InChI=1S/C17H28O3/c1-11-6-7-15(19)17(5)9-8-13(10-14(11)17)16(3,4)20-12(2)18/h10-11,13,15,19H,6-9H2,1-5H3/t11-,13+,15+,17+/m0/s1
SMILES:  C[C@H]1CC[C@H]([C@]2(C)CC[C@H](C=C12)C(C)(C)OC(=O)C)O
Synthetic Gene Cluster:   n.a.
ChEMBL Identifier:   CHEMBL459235
PubChem CID:   10016534
Chemical Classification**:  
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0000012] Lipids and lipid-like molecules
      • [CHEMONTID:0000259] Prenol lipids
        • [CHEMONTID:0001550] Sesquiterpenoids
          • [CHEMONTID:0000101] Eudesmane, isoeudesmane or cycloeudesmane sesquiterpenoids

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO3452 Virgularia juncea Species Virgulariidae Eukaryota n.a. n.a. n.a. PMID[11575967]
NPO1207 Microtropis triflora Species Celastraceae Eukaryota n.a. n.a. n.a. PMID[17972583]
NPO3452 Virgularia juncea Species Virgulariidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20113 Tetraphis pellucida Species Tetraphidaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO7249 Euphorbia copiapina Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO2897 Corbicula japonica Species Corbiculidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO5505 Piptolepis ericoides Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO1207 Microtropis triflora Species Celastraceae Eukaryota n.a. n.a. n.a. Database[UNPD]

☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  NP Quantity Composition/Concentration

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference

☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT168 Cell Line P388 Mus musculus ED50 = 5.1 ug ml-1 PMID[485125]

☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

  Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC283619 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9211 High Similarity NPC142163
0.8947 High Similarity NPC100906
0.8734 High Similarity NPC470948
0.8718 High Similarity NPC473420
0.8642 High Similarity NPC474970
0.8533 High Similarity NPC71152
0.8519 High Similarity NPC476602
0.8519 High Similarity NPC191965
0.85 High Similarity NPC52108
0.85 High Similarity NPC474789
0.8481 Intermediate Similarity NPC159148
0.8462 Intermediate Similarity NPC242767
0.8415 Intermediate Similarity NPC137306
0.8415 Intermediate Similarity NPC73038
0.8415 Intermediate Similarity NPC84121
0.8415 Intermediate Similarity NPC6979
0.8415 Intermediate Similarity NPC325594
0.8378 Intermediate Similarity NPC92801
0.8375 Intermediate Similarity NPC256112
0.8356 Intermediate Similarity NPC208999
0.8354 Intermediate Similarity NPC281880
0.8313 Intermediate Similarity NPC245004
0.8312 Intermediate Similarity NPC265588
0.8293 Intermediate Similarity NPC35933
0.8289 Intermediate Similarity NPC243342
0.8289 Intermediate Similarity NPC477138
0.8272 Intermediate Similarity NPC23748
0.8272 Intermediate Similarity NPC476927
0.8267 Intermediate Similarity NPC167706
0.8267 Intermediate Similarity NPC164022
0.825 Intermediate Similarity NPC170303
0.825 Intermediate Similarity NPC327002
0.825 Intermediate Similarity NPC108476
0.8235 Intermediate Similarity NPC221111
0.8235 Intermediate Similarity NPC280149
0.8228 Intermediate Similarity NPC44083
0.8228 Intermediate Similarity NPC153987
0.8193 Intermediate Similarity NPC473226
0.8193 Intermediate Similarity NPC329692
0.8193 Intermediate Similarity NPC131813
0.8182 Intermediate Similarity NPC477923
0.8182 Intermediate Similarity NPC66566
0.8182 Intermediate Similarity NPC291503
0.8171 Intermediate Similarity NPC306951
0.8171 Intermediate Similarity NPC102048
0.8158 Intermediate Similarity NPC471799
0.8148 Intermediate Similarity NPC2524
0.8148 Intermediate Similarity NPC73882
0.8118 Intermediate Similarity NPC246028
0.8118 Intermediate Similarity NPC20946
0.8118 Intermediate Similarity NPC470588
0.8118 Intermediate Similarity NPC473647
0.8101 Intermediate Similarity NPC321514
0.8101 Intermediate Similarity NPC35574
0.8095 Intermediate Similarity NPC473097
0.8095 Intermediate Similarity NPC71507
0.8095 Intermediate Similarity NPC166857
0.8095 Intermediate Similarity NPC131329
0.8077 Intermediate Similarity NPC1973
0.8077 Intermediate Similarity NPC167873
0.8072 Intermediate Similarity NPC109528
0.8072 Intermediate Similarity NPC52628
0.8068 Intermediate Similarity NPC134067
0.8056 Intermediate Similarity NPC290367
0.8052 Intermediate Similarity NPC91858
0.8052 Intermediate Similarity NPC104644
0.8052 Intermediate Similarity NPC471797
0.8049 Intermediate Similarity NPC49208
0.8049 Intermediate Similarity NPC79945
0.8049 Intermediate Similarity NPC132386
0.8049 Intermediate Similarity NPC57370
0.8049 Intermediate Similarity NPC311070
0.8026 Intermediate Similarity NPC242992
0.8026 Intermediate Similarity NPC242001
0.8025 Intermediate Similarity NPC195334
0.8025 Intermediate Similarity NPC25554
0.8025 Intermediate Similarity NPC290495
0.8023 Intermediate Similarity NPC474728
0.8023 Intermediate Similarity NPC310479
0.8023 Intermediate Similarity NPC78973
0.8 Intermediate Similarity NPC327674
0.8 Intermediate Similarity NPC473242
0.8 Intermediate Similarity NPC290690
0.8 Intermediate Similarity NPC246708
0.8 Intermediate Similarity NPC181225
0.8 Intermediate Similarity NPC473229
0.8 Intermediate Similarity NPC40552
0.8 Intermediate Similarity NPC474512
0.8 Intermediate Similarity NPC291379
0.8 Intermediate Similarity NPC17733
0.8 Intermediate Similarity NPC470429
0.8 Intermediate Similarity NPC470629
0.7978 Intermediate Similarity NPC327179
0.7976 Intermediate Similarity NPC82979
0.7976 Intermediate Similarity NPC155011
0.7976 Intermediate Similarity NPC471219
0.7976 Intermediate Similarity NPC475069
0.7976 Intermediate Similarity NPC175145
0.7975 Intermediate Similarity NPC318495
0.7975 Intermediate Similarity NPC471798
0.7975 Intermediate Similarity NPC155986
0.7975 Intermediate Similarity NPC477924
0.7975 Intermediate Similarity NPC198968
0.7975 Intermediate Similarity NPC470428
0.7955 Intermediate Similarity NPC215700
0.7955 Intermediate Similarity NPC474922
0.7952 Intermediate Similarity NPC46320
0.7952 Intermediate Similarity NPC302360
0.7949 Intermediate Similarity NPC113639
0.7931 Intermediate Similarity NPC285184
0.7931 Intermediate Similarity NPC234335
0.7931 Intermediate Similarity NPC177641
0.7931 Intermediate Similarity NPC186363
0.7931 Intermediate Similarity NPC472811
0.7931 Intermediate Similarity NPC233345
0.7931 Intermediate Similarity NPC470590
0.7931 Intermediate Similarity NPC26888
0.7931 Intermediate Similarity NPC77099
0.7931 Intermediate Similarity NPC60755
0.7931 Intermediate Similarity NPC477574
0.7931 Intermediate Similarity NPC72845
0.7927 Intermediate Similarity NPC286786
0.7922 Intermediate Similarity NPC182717
0.7922 Intermediate Similarity NPC220939
0.7922 Intermediate Similarity NPC265485
0.7907 Intermediate Similarity NPC261320
0.7907 Intermediate Similarity NPC474396
0.7907 Intermediate Similarity NPC314727
0.7907 Intermediate Similarity NPC50488
0.7907 Intermediate Similarity NPC16265
0.7907 Intermediate Similarity NPC198664
0.7907 Intermediate Similarity NPC274330
0.7907 Intermediate Similarity NPC146554
0.7907 Intermediate Similarity NPC143232
0.7901 Intermediate Similarity NPC269791
0.7901 Intermediate Similarity NPC206735
0.7901 Intermediate Similarity NPC233332
0.7895 Intermediate Similarity NPC34834
0.7895 Intermediate Similarity NPC145498
0.7889 Intermediate Similarity NPC285513
0.7889 Intermediate Similarity NPC254496
0.7882 Intermediate Similarity NPC187376
0.7882 Intermediate Similarity NPC18064
0.7882 Intermediate Similarity NPC293564
0.7882 Intermediate Similarity NPC98442
0.7882 Intermediate Similarity NPC142415
0.7882 Intermediate Similarity NPC477926
0.7882 Intermediate Similarity NPC102683
0.7882 Intermediate Similarity NPC474684
0.7882 Intermediate Similarity NPC88716
0.7882 Intermediate Similarity NPC51700
0.7882 Intermediate Similarity NPC171203
0.7882 Intermediate Similarity NPC68160
0.7882 Intermediate Similarity NPC142361
0.7882 Intermediate Similarity NPC233836
0.7882 Intermediate Similarity NPC242468
0.7882 Intermediate Similarity NPC130577
0.7882 Intermediate Similarity NPC307426
0.7882 Intermediate Similarity NPC159046
0.7875 Intermediate Similarity NPC474989
0.7875 Intermediate Similarity NPC476949
0.7875 Intermediate Similarity NPC22955
0.7875 Intermediate Similarity NPC275910
0.7875 Intermediate Similarity NPC476314
0.7875 Intermediate Similarity NPC99168
0.7875 Intermediate Similarity NPC470396
0.7865 Intermediate Similarity NPC276110
0.7857 Intermediate Similarity NPC164424
0.7857 Intermediate Similarity NPC329738
0.7857 Intermediate Similarity NPC471795
0.7857 Intermediate Similarity NPC290731
0.7848 Intermediate Similarity NPC106364
0.7848 Intermediate Similarity NPC300324
0.7848 Intermediate Similarity NPC477925
0.7848 Intermediate Similarity NPC96319
0.7848 Intermediate Similarity NPC321016
0.7848 Intermediate Similarity NPC274079
0.7848 Intermediate Similarity NPC240604
0.7848 Intermediate Similarity NPC321381
0.7848 Intermediate Similarity NPC107059
0.7841 Intermediate Similarity NPC202728
0.7841 Intermediate Similarity NPC474436
0.7841 Intermediate Similarity NPC49776
0.7841 Intermediate Similarity NPC63118
0.7841 Intermediate Similarity NPC162615
0.7841 Intermediate Similarity NPC472812
0.7841 Intermediate Similarity NPC53555
0.7841 Intermediate Similarity NPC118519
0.7841 Intermediate Similarity NPC470224
0.7841 Intermediate Similarity NPC158059
0.7841 Intermediate Similarity NPC152778
0.7841 Intermediate Similarity NPC86368
0.7841 Intermediate Similarity NPC205034
0.7831 Intermediate Similarity NPC312480
0.7831 Intermediate Similarity NPC473592
0.7831 Intermediate Similarity NPC472377
0.7821 Intermediate Similarity NPC201048
0.7821 Intermediate Similarity NPC476366
0.7821 Intermediate Similarity NPC78527
0.7821 Intermediate Similarity NPC100334

  Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC283619 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.7848 Intermediate Similarity NPD3701 Clinical (unspecified phase)
0.7778 Intermediate Similarity NPD7645 Phase 2
0.7722 Intermediate Similarity NPD6942 Approved
0.7722 Intermediate Similarity NPD7339 Approved
0.7711 Intermediate Similarity NPD3667 Approved
0.764 Intermediate Similarity NPD6399 Phase 3
0.7595 Intermediate Similarity NPD6926 Approved
0.7595 Intermediate Similarity NPD6924 Approved
0.7556 Intermediate Similarity NPD7748 Approved
0.7529 Intermediate Similarity NPD4786 Approved
0.7528 Intermediate Similarity NPD7515 Phase 2
0.747 Intermediate Similarity NPD7525 Registered
0.7419 Intermediate Similarity NPD4225 Approved
0.7407 Intermediate Similarity NPD6933 Approved
0.7356 Intermediate Similarity NPD3618 Phase 1
0.7333 Intermediate Similarity NPD6411 Approved
0.7312 Intermediate Similarity NPD7902 Approved
0.7284 Intermediate Similarity NPD8264 Approved
0.7234 Intermediate Similarity NPD7638 Approved
0.7209 Intermediate Similarity NPD6695 Phase 3
0.7159 Intermediate Similarity NPD7146 Approved
0.7159 Intermediate Similarity NPD7334 Approved
0.7159 Intermediate Similarity NPD7521 Approved
0.7159 Intermediate Similarity NPD6409 Approved
0.7159 Intermediate Similarity NPD6684 Approved
0.7159 Intermediate Similarity NPD5330 Approved
0.7158 Intermediate Similarity NPD7640 Approved
0.7158 Intermediate Similarity NPD7639 Approved
0.7143 Intermediate Similarity NPD7128 Approved
0.7143 Intermediate Similarity NPD5739 Approved
0.7143 Intermediate Similarity NPD6402 Approved
0.7143 Intermediate Similarity NPD6675 Approved
0.7128 Intermediate Similarity NPD6084 Phase 2
0.7128 Intermediate Similarity NPD6083 Phase 2
0.7126 Intermediate Similarity NPD7338 Clinical (unspecified phase)
0.7126 Intermediate Similarity NPD3665 Phase 1
0.7126 Intermediate Similarity NPD3666 Approved
0.7126 Intermediate Similarity NPD3133 Approved
0.7125 Intermediate Similarity NPD7150 Approved
0.7125 Intermediate Similarity NPD7151 Approved
0.7125 Intermediate Similarity NPD7152 Approved
0.7111 Intermediate Similarity NPD5328 Approved
0.7111 Intermediate Similarity NPD5764 Clinical (unspecified phase)
0.7111 Intermediate Similarity NPD6051 Approved
0.7111 Intermediate Similarity NPD6101 Approved
0.7097 Intermediate Similarity NPD5695 Phase 3
0.7089 Intermediate Similarity NPD6923 Approved
0.7089 Intermediate Similarity NPD6922 Approved
0.7079 Intermediate Similarity NPD3573 Approved
0.7079 Intermediate Similarity NPD4751 Clinical (unspecified phase)
0.7071 Intermediate Similarity NPD5697 Approved
0.7071 Intermediate Similarity NPD5701 Approved
0.7065 Intermediate Similarity NPD4202 Approved
0.7059 Intermediate Similarity NPD7509 Discontinued
0.7059 Intermediate Similarity NPD6930 Phase 2
0.7059 Intermediate Similarity NPD6931 Approved
0.7059 Intermediate Similarity NPD4748 Discontinued
0.7045 Intermediate Similarity NPD7520 Clinical (unspecified phase)
0.7 Intermediate Similarity NPD7144 Approved
0.7 Intermediate Similarity NPD7143 Approved
0.7 Intermediate Similarity NPD6899 Approved
0.7 Intermediate Similarity NPD6903 Approved
0.7 Intermediate Similarity NPD6011 Approved
0.7 Intermediate Similarity NPD7513 Clinical (unspecified phase)
0.7 Intermediate Similarity NPD6881 Approved
0.7 Intermediate Similarity NPD7320 Approved
0.6989 Remote Similarity NPD7900 Approved
0.6989 Remote Similarity NPD7901 Clinical (unspecified phase)
0.6966 Remote Similarity NPD5279 Phase 3
0.6957 Remote Similarity NPD7637 Suspended
0.6957 Remote Similarity NPD6079 Approved
0.6951 Remote Similarity NPD4785 Approved
0.6951 Remote Similarity NPD4784 Approved
0.6941 Remote Similarity NPD6929 Approved
0.6941 Remote Similarity NPD4195 Approved
0.6932 Remote Similarity NPD3668 Phase 3
0.6932 Remote Similarity NPD6400 Clinical (unspecified phase)
0.6931 Remote Similarity NPD6012 Approved
0.6931 Remote Similarity NPD6373 Approved
0.6931 Remote Similarity NPD6372 Approved
0.6931 Remote Similarity NPD6013 Approved
0.6931 Remote Similarity NPD6014 Approved
0.6914 Remote Similarity NPD4243 Approved
0.6905 Remote Similarity NPD6932 Approved
0.6897 Remote Similarity NPD4752 Clinical (unspecified phase)
0.6889 Remote Similarity NPD7524 Approved
0.6889 Remote Similarity NPD7750 Discontinued
0.6882 Remote Similarity NPD5778 Approved
0.6882 Remote Similarity NPD5779 Approved
0.6875 Remote Similarity NPD5696 Approved
0.6863 Remote Similarity NPD7102 Approved
0.6863 Remote Similarity NPD7290 Approved
0.6863 Remote Similarity NPD6883 Approved
0.686 Remote Similarity NPD4695 Discontinued
0.6842 Remote Similarity NPD368 Approved
0.6824 Remote Similarity NPD7322 Clinical (unspecified phase)
0.6813 Remote Similarity NPD6672 Approved
0.6813 Remote Similarity NPD5737 Approved
0.6796 Remote Similarity NPD6649 Approved
0.6796 Remote Similarity NPD6847 Approved
0.6796 Remote Similarity NPD6617 Approved
0.6796 Remote Similarity NPD6650 Approved
0.6796 Remote Similarity NPD6869 Approved
0.6796 Remote Similarity NPD8130 Phase 1
0.6796 Remote Similarity NPD6401 Clinical (unspecified phase)
0.6778 Remote Similarity NPD6098 Approved
0.6774 Remote Similarity NPD8035 Phase 2
0.6774 Remote Similarity NPD8034 Phase 2
0.6771 Remote Similarity NPD4755 Approved
0.6744 Remote Similarity NPD6683 Phase 2
0.6739 Remote Similarity NPD4753 Phase 2
0.6735 Remote Similarity NPD5344 Discontinued
0.6731 Remote Similarity NPD8297 Approved
0.6731 Remote Similarity NPD6882 Approved
0.6706 Remote Similarity NPD6925 Approved
0.6706 Remote Similarity NPD5776 Phase 2
0.6705 Remote Similarity NPD4221 Approved
0.6705 Remote Similarity NPD4223 Phase 3
0.6667 Remote Similarity NPD6893 Approved
0.6667 Remote Similarity NPD5220 Clinical (unspecified phase)
0.6667 Remote Similarity NPD7514 Phase 3
0.6667 Remote Similarity NPD1694 Approved
0.6667 Remote Similarity NPD4190 Phase 3
0.6667 Remote Similarity NPD7332 Phase 2
0.6667 Remote Similarity NPD4697 Phase 3
0.6667 Remote Similarity NPD5275 Approved
0.6667 Remote Similarity NPD5222 Approved
0.6667 Remote Similarity NPD5221 Approved
0.6636 Remote Similarity NPD7115 Discovery
0.6634 Remote Similarity NPD6008 Approved
0.6633 Remote Similarity NPD4696 Approved
0.6633 Remote Similarity NPD5285 Approved
0.6633 Remote Similarity NPD5286 Approved
0.6633 Remote Similarity NPD4700 Approved
0.663 Remote Similarity NPD5208 Approved
0.6628 Remote Similarity NPD7145 Approved
0.6598 Remote Similarity NPD5173 Approved
0.6596 Remote Similarity NPD5284 Approved
0.6596 Remote Similarity NPD7087 Discontinued
0.6596 Remote Similarity NPD5281 Approved
0.6591 Remote Similarity NPD6898 Phase 1
0.6591 Remote Similarity NPD5369 Approved
0.6582 Remote Similarity NPD2685 Clinical (unspecified phase)
0.6566 Remote Similarity NPD5223 Approved
0.6562 Remote Similarity NPD6356 Clinical (unspecified phase)
0.6559 Remote Similarity NPD6904 Approved
0.6559 Remote Similarity NPD6673 Approved
0.6559 Remote Similarity NPD7285 Clinical (unspecified phase)
0.6559 Remote Similarity NPD6080 Approved
0.6556 Remote Similarity NPD4197 Approved
0.6542 Remote Similarity NPD6274 Approved
0.6531 Remote Similarity NPD5290 Discontinued
0.6509 Remote Similarity NPD4632 Approved
0.65 Remote Similarity NPD5225 Approved
0.65 Remote Similarity NPD5226 Approved
0.65 Remote Similarity NPD7632 Discontinued
0.65 Remote Similarity NPD4633 Approved
0.65 Remote Similarity NPD5224 Approved
0.65 Remote Similarity NPD5211 Phase 2
0.6489 Remote Similarity NPD5207 Approved
0.6489 Remote Similarity NPD5692 Phase 3
0.6484 Remote Similarity NPD5329 Approved
0.6481 Remote Similarity NPD6317 Approved
0.6477 Remote Similarity NPD4819 Approved
0.6477 Remote Similarity NPD4820 Approved
0.6477 Remote Similarity NPD4822 Approved
0.6477 Remote Similarity NPD8259 Clinical (unspecified phase)
0.6477 Remote Similarity NPD5790 Clinical (unspecified phase)
0.6477 Remote Similarity NPD4821 Approved
0.6471 Remote Similarity NPD8039 Approved
0.6465 Remote Similarity NPD6648 Approved
0.6458 Remote Similarity NPD5707 Approved
0.6458 Remote Similarity NPD6001 Approved
0.6456 Remote Similarity NPD5325 Clinical (unspecified phase)
0.6444 Remote Similarity NPD5362 Discontinued
0.6444 Remote Similarity NPD7154 Phase 3
0.6442 Remote Similarity NPD4061 Clinical (unspecified phase)
0.6437 Remote Similarity NPD5784 Clinical (unspecified phase)
0.6436 Remote Similarity NPD4754 Approved
0.6436 Remote Similarity NPD5174 Approved
0.6436 Remote Similarity NPD5175 Approved
0.6422 Remote Similarity NPD6335 Approved
0.6422 Remote Similarity NPD6313 Approved
0.6422 Remote Similarity NPD6314 Approved
0.6421 Remote Similarity NPD5694 Approved
0.6421 Remote Similarity NPD6050 Approved
0.6421 Remote Similarity NPD5693 Phase 1
0.6413 Remote Similarity NPD4138 Approved
0.6413 Remote Similarity NPD4693 Phase 3
0.6413 Remote Similarity NPD3574 Clinical (unspecified phase)
0.6413 Remote Similarity NPD4688 Approved
0.6413 Remote Similarity NPD4623 Approved
0.6413 Remote Similarity NPD4690 Approved
0.6413 Remote Similarity NPD5280 Approved
0.6413 Remote Similarity NPD4519 Discontinued
0.6413 Remote Similarity NPD5690 Phase 2
0.6413 Remote Similarity NPD5205 Approved
0.6413 Remote Similarity NPD4689 Approved
0.6413 Remote Similarity NPD6422 Discontinued
0.6413 Remote Similarity NPD4694 Approved

  Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data