Structure

Physi-Chem Properties

Molecular Weight:  575.31
Volume:  579.976
LogP:  3.991
LogD:  3.34
LogS:  -3.45
# Rotatable Bonds:  6
TPSA:  118.21
# H-Bond Aceptor:  10
# H-Bond Donor:  3
# Rings:  7
# Heavy Atoms:  10

MedChem Properties

QED Drug-Likeness Score:  0.504
Synthetic Accessibility Score:  5.025
Fsp3:  0.594
Lipinski Rule-of-5:  Accepted
Pfizer Rule:  Accepted
GSK Rule:  Rejected
BMS Rule:  0
Golden Triangle Rule:  Rejected
Chelating Alert:  0
PAINS Alert:  0

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

Caco-2 Permeability:  -5.015
MDCK Permeability:  1.1624017133726738e-05
Pgp-inhibitor:  0.998
Pgp-substrate:  0.079
Human Intestinal Absorption (HIA):  0.059
20% Bioavailability (F20%):  0.007
30% Bioavailability (F30%):  0.983

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):  0.409
Plasma Protein Binding (PPB):  88.26892852783203%
Volume Distribution (VD):  2.809
Pgp-substrate:  6.308772563934326%

ADMET: Metabolism

CYP1A2-inhibitor:  0.009
CYP1A2-substrate:  0.116
CYP2C19-inhibitor:  0.729
CYP2C19-substrate:  0.921
CYP2C9-inhibitor:  0.947
CYP2C9-substrate:  0.093
CYP2D6-inhibitor:  0.013
CYP2D6-substrate:  0.157
CYP3A4-inhibitor:  0.939
CYP3A4-substrate:  0.952

ADMET: Excretion

Clearance (CL):  14.426
Half-life (T1/2):  0.536

ADMET: Toxicity

hERG Blockers:  0.068
Human Hepatotoxicity (H-HT):  0.533
Drug-inuced Liver Injury (DILI):  0.97
AMES Toxicity:  0.015
Rat Oral Acute Toxicity:  0.771
Maximum Recommended Daily Dose:  0.958
Skin Sensitization:  0.313
Carcinogencity:  0.965
Eye Corrosion:  0.003
Eye Irritation:  0.004
Respiratory Toxicity:  0.16

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General Info & Identifiers & Properties  
Structure MOL file  
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Biological Activities  
Similar NPs/Drugs  

  Natural Product: NPC155444

Natural Product ID:  NPC155444
Common Name*:   Ergocryptine
IUPAC Name:   n.a.
Synonyms:   Alpha-Ergocryptine
Standard InCHIKey:  YDOTUXAWKBPQJW-NSLWYYNWSA-N
Standard InCHI:  InChI=1S/C32H41N5O5/c1-17(2)12-25-29(39)36-11-7-10-26(36)32(41)37(25)30(40)31(42-32,18(3)4)34-28(38)20-13-22-21-8-6-9-23-27(21)19(15-33-23)14-24(22)35(5)16-20/h6,8-9,13,15,17-18,20,24-26,33,41H,7,10-12,14,16H2,1-5H3,(H,34,38)/t20-,24-,25+,26+,31-,32+/m1/s1
SMILES:  CC(C)C[C@H]1C(=O)N2CCC[C@H]2[C@]2(N1C(=O)[C@](C(C)C)(N=C([C@@H]1C=C3c4cccc5c4c(C[C@H]3N(C)C1)c[nH]5)O)O2)O
Synthetic Gene Cluster:   n.a.
ChEMBL Identifier:   CHEMBL1403281
PubChem CID:   134551
Chemical Classification**:  
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0000279] Alkaloids and derivatives
      • [CHEMONTID:0002679] Ergoline and derivatives
        • [CHEMONTID:0002680] Lysergic acids and derivatives
          • [CHEMONTID:0002746] Lysergamides

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO24009 Claviceps purpurea Species Clavicipitaceae Eukaryota n.a. n.a. n.a. PMID[17841110]
NPO24009 Claviceps purpurea Species Clavicipitaceae Eukaryota n.a. n.a. n.a. PMID[20778930]
NPO24009 Claviceps purpurea Species Clavicipitaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO24009 Claviceps purpurea Species Clavicipitaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO24009 Claviceps purpurea Species Clavicipitaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO24009 Claviceps purpurea Species Clavicipitaceae Eukaryota n.a. n.a. n.a. Database[UNPD]

☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  NP Quantity Composition/Concentration

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference

☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT4741 Individual Protein Cholecystokinin A receptor Mus musculus IC50 > 80000.0 nM PMID[528351]
NPT4742 Individual Protein Cholecystokinin B receptor Mus musculus IC50 > 80000.0 nM PMID[528351]
NPT45 Individual Protein Ubiquitin carboxyl-terminal hydrolase 2 Homo sapiens Potency = 11220.2 nM PMID[528352]
NPT149 Individual Protein Endoplasmic reticulum-associated amyloid beta-peptide-binding protein Homo sapiens Potency = 7943.3 nM PMID[528353]
NPT48 Individual Protein Lysine-specific demethylase 4D-like Homo sapiens Potency = 15848.9 nM PMID[528353]
NPT1226 Individual Protein Caspase-7 Homo sapiens Potency = 25118.9 nM PMID[528353]
NPT51 Individual Protein Microtubule-associated protein tau Homo sapiens Potency = 15848.9 nM PMID[528354]
NPT51 Individual Protein Microtubule-associated protein tau Homo sapiens Potency = 15848.9 nM PMID[528353]
NPT51 Individual Protein Microtubule-associated protein tau Homo sapiens Potency = 12589.3 nM PMID[528353]
NPT51 Individual Protein Microtubule-associated protein tau Homo sapiens Potency = 14125.4 nM PMID[528354]
NPT3 Individual Protein Thioredoxin glutathione reductase Schistosoma mansoni Potency = 5623.4 nM PMID[528352]
NPT51 Individual Protein Microtubule-associated protein tau Homo sapiens Potency = 35481.3 nM PMID[528353]
NPT51 Individual Protein Microtubule-associated protein tau Homo sapiens Potency = 44668.4 nM PMID[528354]
NPT151 Individual Protein 15-hydroxyprostaglandin dehydrogenase [NAD+] Homo sapiens Potency = 35481.3 nM PMID[528353]
NPT277 Individual Protein Caspase-1 Homo sapiens Potency = 25118.9 nM PMID[528353]
NPT109 Individual Protein Cytochrome P450 3A4 Homo sapiens Potency = 1000.0 nM PMID[528353]
NPT532 Individual Protein Lysine-specific demethylase 4A Homo sapiens Potency n.a. 50118.7 nM PMID[528352]
NPT152 Individual Protein Nuclear factor erythroid 2-related factor 2 Homo sapiens Potency n.a. 12995.3 nM PMID[528352]
NPT1005 Individual Protein Tumor susceptibility gene 101 protein Homo sapiens Potency n.a. 50118.7 nM PMID[528352]
NPT5 Individual Protein Histone-lysine N-methyltransferase, H3 lysine-9 specific 3 Homo sapiens Potency n.a. 6309.6 nM PMID[528352]
NPT198 Individual Protein Vitamin D receptor Homo sapiens Potency n.a. 79432.8 nM PMID[528352]
NPT477 Individual Protein DNA dC->dU-editing enzyme APOBEC-3G Homo sapiens Potency n.a. 26608.6 nM PMID[528355]
NPT199 Individual Protein DNA polymerase kappa Homo sapiens Potency n.a. 891.3 nM PMID[528355]
NPT219 Individual Protein Alpha-1a adrenergic receptor Rattus norvegicus IC50 = 11.0 nM PMID[528356]
NPT219 Individual Protein Alpha-1a adrenergic receptor Rattus norvegicus Ki = 4.279 nM PMID[528356]
NPT220 Individual Protein Alpha-1b adrenergic receptor Rattus norvegicus IC50 = 14.0 nM PMID[528356]
NPT220 Individual Protein Alpha-1b adrenergic receptor Rattus norvegicus Ki = 7.938 nM PMID[528356]
NPT221 Individual Protein Alpha-1d adrenergic receptor Homo sapiens IC50 = 48.0 nM PMID[528356]
NPT221 Individual Protein Alpha-1d adrenergic receptor Homo sapiens Ki = 24.0 nM PMID[528356]
NPT222 Individual Protein Alpha-2a adrenergic receptor Homo sapiens IC50 = 7.946 nM PMID[528356]
NPT222 Individual Protein Alpha-2a adrenergic receptor Homo sapiens Ki = 2.98 nM PMID[528356]
NPT223 Individual Protein Alpha-2b adrenergic receptor Homo sapiens IC50 = 26.0 nM PMID[528356]
NPT223 Individual Protein Alpha-2b adrenergic receptor Homo sapiens Ki = 12.0 nM PMID[528356]
NPT224 Individual Protein Alpha-2c adrenergic receptor Homo sapiens IC50 = 38.0 nM PMID[528356]
NPT224 Individual Protein Alpha-2c adrenergic receptor Homo sapiens Ki = 5.484 nM PMID[528356]
NPT227 Individual Protein Beta-3 adrenergic receptor Homo sapiens IC50 = 2496.0 nM PMID[528356]
NPT227 Individual Protein Beta-3 adrenergic receptor Homo sapiens Ki = 1872.0 nM PMID[528356]
NPT212 Individual Protein Cytochrome P450 2C9 Homo sapiens IC50 = 6000.0 nM PMID[528356]
NPT109 Individual Protein Cytochrome P450 3A4 Homo sapiens IC50 = 600.0 nM PMID[528356]
NPT242 Individual Protein Dopamine D1 receptor Homo sapiens IC50 = 403.0 nM PMID[528356]
NPT242 Individual Protein Dopamine D1 receptor Homo sapiens Ki = 202.0 nM PMID[528356]
NPT243 Individual Protein Dopamine D2 receptor Homo sapiens IC50 = 1.95 nM PMID[528356]
NPT243 Individual Protein Dopamine D2 receptor Homo sapiens Ki = 0.65 nM PMID[528356]
NPT244 Individual Protein Dopamine D3 receptor Homo sapiens IC50 = 0.589 nM PMID[528356]
NPT244 Individual Protein Dopamine D3 receptor Homo sapiens Ki = 0.2 nM PMID[528356]
NPT145 Individual Protein Mu opioid receptor Homo sapiens IC50 = 2427.0 nM PMID[528356]
NPT145 Individual Protein Mu opioid receptor Homo sapiens Ki = 985.0 nM PMID[528356]
NPT288 Individual Protein Serotonin 1a (5-HT1a) receptor Rattus norvegicus IC50 = 2.631 nM PMID[528356]
NPT288 Individual Protein Serotonin 1a (5-HT1a) receptor Rattus norvegicus Ki = 1.503 nM PMID[528356]
NPT289 Individual Protein Serotonin 1b (5-HT1b) receptor Rattus norvegicus IC50 = 8.199 nM PMID[528356]
NPT289 Individual Protein Serotonin 1b (5-HT1b) receptor Rattus norvegicus Ki = 5.021 nM PMID[528356]
NPT290 Individual Protein Serotonin 2a (5-HT2a) receptor Homo sapiens IC50 = 47.0 nM PMID[528356]
NPT290 Individual Protein Serotonin 2a (5-HT2a) receptor Homo sapiens Ki = 14.0 nM PMID[528356]
NPT291 Individual Protein Serotonin 2b (5-HT2b) receptor Homo sapiens IC50 = 13.0 nM PMID[528356]
NPT291 Individual Protein Serotonin 2b (5-HT2b) receptor Homo sapiens Ki = 8.217 nM PMID[528356]
NPT292 Individual Protein Serotonin 2c (5-HT2c) receptor Homo sapiens IC50 = 147.0 nM PMID[528356]
NPT292 Individual Protein Serotonin 2c (5-HT2c) receptor Homo sapiens Ki = 77.0 nM PMID[528356]
NPT294 Individual Protein Serotonin 6 (5-HT6) receptor Homo sapiens IC50 = 16.0 nM PMID[528356]
NPT294 Individual Protein Serotonin 6 (5-HT6) receptor Homo sapiens Ki = 7.559 nM PMID[528356]
NPT2971 Individual Protein DNA dC->dU-editing enzyme APOBEC-3F Homo sapiens Potency n.a. 17782.8 nM PMID[528352]
NPT1456 Individual Protein P-glycoprotein 1 Mus musculus Ki = 26900.0 nM PMID[528358]
NPT1455 Individual Protein P-glycoprotein 3 Mus musculus Ki = 43500.0 nM PMID[528358]
NPT156 Individual Protein Sphingomyelin phosphodiesterase Homo sapiens Potency n.a. 31622.8 nM PMID[528352]
NPT10 Individual Protein Geminin Homo sapiens Potency n.a. 65.1 nM PMID[528352]
NPT1005 Individual Protein Tumor susceptibility gene 101 protein Homo sapiens Potency n.a. 365.9 nM PMID[528352]
NPT50 Individual Protein Tyrosyl-DNA phosphodiesterase 1 Homo sapiens Potency n.a. 16360.1 nM PMID[528352]
NPT50 Individual Protein Tyrosyl-DNA phosphodiesterase 1 Homo sapiens Potency n.a. 16360.1 nM PMID[528359]
NPT50 Individual Protein Tyrosyl-DNA phosphodiesterase 1 Homo sapiens Potency n.a. 26608.6 nM PMID[528355]
NPT50 Individual Protein Tyrosyl-DNA phosphodiesterase 1 Homo sapiens Potency n.a. 20596.2 nM PMID[528359]
NPT50 Individual Protein Tyrosyl-DNA phosphodiesterase 1 Homo sapiens Potency n.a. 18837.5 nM PMID[528355]
NPT50 Individual Protein Tyrosyl-DNA phosphodiesterase 1 Homo sapiens Potency n.a. 20596.2 nM PMID[528352]
NPT444 Individual Protein Ubiquitin carboxyl-terminal hydrolase 1 Homo sapiens Potency n.a. 17782.8 nM PMID[528352]
NPT244 Individual Protein Dopamine D3 receptor Homo sapiens Potency n.a. 199.5 nM PMID[528352]
NPT49 Individual Protein DNA-(apurinic or apyrimidinic site) lyase Homo sapiens Potency n.a. 10000.0 nM PMID[528354]
NPT197 Protein-Protein Interaction Menin/Histone-lysine N-methyltransferase MLL Homo sapiens Potency = 35481.3 nM PMID[528353]
NPT2 Others Unspecified Potency = 25118.9 nM PMID[528353]
NPT791 Individual Protein Cruzipain Trypanosoma cruzi Potency = 39810.7 nM PMID[528353]
NPT94 Individual Protein Aldehyde dehydrogenase 1A1 Homo sapiens Potency = 31622.8 nM PMID[528353]
NPT94 Individual Protein Aldehyde dehydrogenase 1A1 Homo sapiens Potency = 25118.9 nM PMID[528354]
NPT197 Protein-Protein Interaction Menin/Histone-lysine N-methyltransferase MLL Homo sapiens Potency = 10000.0 nM PMID[528353]
NPT2 Others Unspecified Potency = 7943.3 nM PMID[528353]
NPT533 Protein-Protein Interaction Runt-related transcription factor 1/Core-binding factor subunit beta Homo sapiens Potency n.a. 7911.3 nM PMID[528353]
NPT533 Protein-Protein Interaction Runt-related transcription factor 1/Core-binding factor subunit beta Homo sapiens Potency n.a. 7051.0 nM PMID[528354]
NPT533 Protein-Protein Interaction Runt-related transcription factor 1/Core-binding factor subunit beta Homo sapiens Potency n.a. 35481.3 nM PMID[528353]
NPT533 Protein-Protein Interaction Runt-related transcription factor 1/Core-binding factor subunit beta Homo sapiens Potency n.a. 28183.8 nM PMID[528354]
NPT533 Protein-Protein Interaction Runt-related transcription factor 1/Core-binding factor subunit beta Homo sapiens Potency n.a. 11220.2 nM PMID[528354]
NPT533 Protein-Protein Interaction Runt-related transcription factor 1/Core-binding factor subunit beta Homo sapiens Potency n.a. 7079.5 nM PMID[528353]
NPT21702 PROTEIN-PROTEIN INTERACTION Importin subunit beta-1/Snurportin-1 Homo sapiens Potency n.a. 100000.0 nM PMID[528352]
NPT6 Organism Plasmodium falciparum Plasmodium falciparum Potency n.a. 3696.4 nM PMID[528352]
NPT20798 PROTEIN COMPLEX GTP-binding nuclear protein Ran/Importin subunit beta-1/Snurportin-1 Homo sapiens Potency n.a. 31622.8 nM PMID[528352]
NPT7 Individual Protein Thioredoxin reductase 1, cytoplasmic Rattus norvegicus Potency n.a. 15848.9 nM PMID[528352]
NPT8 Individual Protein DNA polymerase iota Homo sapiens Potency n.a. 11220.2 nM PMID[528352]
NPT803 Individual Protein Flap endonuclease 1 Homo sapiens Potency n.a. 12589.3 nM PMID[528352]
NPT698 Individual Protein Regulator of G-protein signaling 4 Homo sapiens Potency n.a. 56234.1 nM PMID[528352]
NPT6 Organism Plasmodium falciparum Plasmodium falciparum Potency n.a. 2936.2 nM PMID[528352]
NPT7 Individual Protein Thioredoxin reductase 1, cytoplasmic Rattus norvegicus Potency n.a. 44668.4 nM PMID[528352]
NPT2 Others Unspecified IC50 = 3.279 nM PMID[528356]
NPT2 Others Unspecified Ki = 2.186 nM PMID[528356]
NPT668 Individual Protein P-glycoprotein 1 Homo sapiens Ki = 12200.0 nM PMID[528357]
NPT668 Individual Protein P-glycoprotein 1 Homo sapiens Ki = 6430.0 nM PMID[528357]
NPT533 Protein-Protein Interaction Runt-related transcription factor 1/Core-binding factor subunit beta Homo sapiens Potency n.a. 65.1 nM PMID[528353]
NPT533 Protein-Protein Interaction Runt-related transcription factor 1/Core-binding factor subunit beta Homo sapiens Potency n.a. 6506.4 nM PMID[528354]
NPT2 Others Unspecified Potency n.a. 11220.2 nM PMID[528352]
NPT755 Individual Protein Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 Homo sapiens Potency n.a. 44668.4 nM PMID[528352]
NPT2 Others Unspecified Potency n.a. 1000.0 nM PMID[528352]
NPT831 Individual Protein Serine/threonine-protein kinase PLK1 Homo sapiens Potency n.a. 29934.9 nM PMID[528352]
NPT2 Others Unspecified Potency n.a. 14125.4 nM PMID[528355]
NPT2 Others Unspecified Potency n.a. 39810.7 nM PMID[528359]
NPT20555 ORGANISM SARS-CoV-2 Severe acute respiratory syndrome coronavirus 2 IC50 > 20000.0 nM PMID[528360]
NPT20555 ORGANISM SARS-CoV-2 Severe acute respiratory syndrome coronavirus 2 IC50 > 19952.62 nM PMID[528360]

☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

  Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC155444 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9752 High Similarity NPC56109
0.9752 High Similarity NPC191382
0.8416 Intermediate Similarity NPC171317
0.8224 Intermediate Similarity NPC477714
0.82 Intermediate Similarity NPC213629
0.819 Intermediate Similarity NPC478158
0.819 Intermediate Similarity NPC162860
0.8182 Intermediate Similarity NPC54420
0.8169 Intermediate Similarity NPC478157
0.815 Intermediate Similarity NPC17059
0.8104 Intermediate Similarity NPC107077
0.8104 Intermediate Similarity NPC223791
0.81 Intermediate Similarity NPC94752
0.8093 Intermediate Similarity NPC477715
0.8056 Intermediate Similarity NPC281049
0.8029 Intermediate Similarity NPC475506
0.8019 Intermediate Similarity NPC293917
0.8 Intermediate Similarity NPC228835
0.7991 Intermediate Similarity NPC75634
0.799 Intermediate Similarity NPC155143
0.7971 Intermediate Similarity NPC473640
0.787 Intermediate Similarity NPC54744
0.7847 Intermediate Similarity NPC100321
0.783 Intermediate Similarity NPC473376
0.78 Intermediate Similarity NPC11126
0.7793 Intermediate Similarity NPC64216
0.7766 Intermediate Similarity NPC194411
0.7761 Intermediate Similarity NPC91179
0.775 Intermediate Similarity NPC68354
0.7743 Intermediate Similarity NPC475859
0.7743 Intermediate Similarity NPC475969
0.7742 Intermediate Similarity NPC75726
0.7742 Intermediate Similarity NPC110602
0.7742 Intermediate Similarity NPC31385
0.7736 Intermediate Similarity NPC193761
0.7719 Intermediate Similarity NPC325976
0.7709 Intermediate Similarity NPC89987
0.7706 Intermediate Similarity NPC475602
0.7699 Intermediate Similarity NPC470730
0.7699 Intermediate Similarity NPC477175
0.7696 Intermediate Similarity NPC478029
0.7696 Intermediate Similarity NPC320968
0.7689 Intermediate Similarity NPC476491
0.7681 Intermediate Similarity NPC117244
0.7681 Intermediate Similarity NPC473763
0.7675 Intermediate Similarity NPC323752
0.7665 Intermediate Similarity NPC474877
0.765 Intermediate Similarity NPC275305
0.765 Intermediate Similarity NPC37423
0.7647 Intermediate Similarity NPC165495
0.7636 Intermediate Similarity NPC470731
0.7633 Intermediate Similarity NPC95783
0.7632 Intermediate Similarity NPC165743
0.7621 Intermediate Similarity NPC470729
0.7621 Intermediate Similarity NPC326363
0.7621 Intermediate Similarity NPC477176
0.7609 Intermediate Similarity NPC478028
0.7598 Intermediate Similarity NPC63279
0.7588 Intermediate Similarity NPC477177
0.7573 Intermediate Similarity NPC235684
0.757 Intermediate Similarity NPC476874
0.7566 Intermediate Similarity NPC24370
0.7566 Intermediate Similarity NPC319232
0.7566 Intermediate Similarity NPC475338
0.7566 Intermediate Similarity NPC909
0.7565 Intermediate Similarity NPC297642
0.7557 Intermediate Similarity NPC470732
0.7533 Intermediate Similarity NPC475258
0.7524 Intermediate Similarity NPC15102
0.75 Intermediate Similarity NPC321708
0.7489 Intermediate Similarity NPC473310
0.7488 Intermediate Similarity NPC59269
0.7477 Intermediate Similarity NPC472027
0.7477 Intermediate Similarity NPC470497
0.7476 Intermediate Similarity NPC47190
0.7467 Intermediate Similarity NPC69843
0.7466 Intermediate Similarity NPC473757
0.7465 Intermediate Similarity NPC470499
0.7451 Intermediate Similarity NPC215795
0.7451 Intermediate Similarity NPC176199
0.7449 Intermediate Similarity NPC472846
0.744 Intermediate Similarity NPC308931
0.744 Intermediate Similarity NPC99939
0.7439 Intermediate Similarity NPC315467
0.7426 Intermediate Similarity NPC314603
0.7421 Intermediate Similarity NPC471193
0.7421 Intermediate Similarity NPC6865
0.7421 Intermediate Similarity NPC153980
0.7421 Intermediate Similarity NPC471194
0.7412 Intermediate Similarity NPC472762
0.7409 Intermediate Similarity NPC475422
0.74 Intermediate Similarity NPC474561
0.74 Intermediate Similarity NPC49954
0.74 Intermediate Similarity NPC160105
0.7397 Intermediate Similarity NPC87755
0.7389 Intermediate Similarity NPC474896
0.7389 Intermediate Similarity NPC471506
0.7389 Intermediate Similarity NPC469938
0.7386 Intermediate Similarity NPC314882
0.7376 Intermediate Similarity NPC72956
0.7368 Intermediate Similarity NPC19170
0.7366 Intermediate Similarity NPC126709
0.7366 Intermediate Similarity NPC248041
0.7366 Intermediate Similarity NPC283219
0.7363 Intermediate Similarity NPC63751
0.7361 Intermediate Similarity NPC300183
0.7357 Intermediate Similarity NPC31097
0.7352 Intermediate Similarity NPC166492
0.7352 Intermediate Similarity NPC473362
0.7345 Intermediate Similarity NPC272174
0.7344 Intermediate Similarity NPC153400
0.734 Intermediate Similarity NPC161861
0.7339 Intermediate Similarity NPC478009
0.7339 Intermediate Similarity NPC478010
0.7336 Intermediate Similarity NPC227582
0.7328 Intermediate Similarity NPC63031
0.7327 Intermediate Similarity NPC476073
0.7324 Intermediate Similarity NPC294693
0.7323 Intermediate Similarity NPC318065
0.7323 Intermediate Similarity NPC206819
0.7323 Intermediate Similarity NPC56765
0.7317 Intermediate Similarity NPC145885
0.7317 Intermediate Similarity NPC84827
0.7317 Intermediate Similarity NPC14113
0.7315 Intermediate Similarity NPC252338
0.7302 Intermediate Similarity NPC265576
0.7293 Intermediate Similarity NPC474196
0.7288 Intermediate Similarity NPC472207
0.7282 Intermediate Similarity NPC213468
0.7281 Intermediate Similarity NPC327095
0.7281 Intermediate Similarity NPC253987
0.7281 Intermediate Similarity NPC312942
0.7273 Intermediate Similarity NPC297862
0.7269 Intermediate Similarity NPC74413
0.7268 Intermediate Similarity NPC267885
0.7265 Intermediate Similarity NPC478006
0.7252 Intermediate Similarity NPC126066
0.725 Intermediate Similarity NPC282231
0.7249 Intermediate Similarity NPC40455
0.7244 Intermediate Similarity NPC471192
0.7244 Intermediate Similarity NPC251936
0.7232 Intermediate Similarity NPC229348
0.7225 Intermediate Similarity NPC472294
0.722 Intermediate Similarity NPC149155
0.722 Intermediate Similarity NPC110500
0.722 Intermediate Similarity NPC203468
0.7215 Intermediate Similarity NPC317701
0.7214 Intermediate Similarity NPC194640
0.7203 Intermediate Similarity NPC184225
0.72 Intermediate Similarity NPC250835
0.72 Intermediate Similarity NPC279918
0.7198 Intermediate Similarity NPC219336
0.7195 Intermediate Similarity NPC323927
0.7194 Intermediate Similarity NPC478012
0.7194 Intermediate Similarity NPC478011
0.7193 Intermediate Similarity NPC474195
0.719 Intermediate Similarity NPC280290
0.7183 Intermediate Similarity NPC243716
0.7181 Intermediate Similarity NPC475736
0.7177 Intermediate Similarity NPC19679
0.7177 Intermediate Similarity NPC470205
0.7176 Intermediate Similarity NPC232130
0.7174 Intermediate Similarity NPC476817
0.7169 Intermediate Similarity NPC260900
0.7165 Intermediate Similarity NPC314176
0.7163 Intermediate Similarity NPC195239
0.7163 Intermediate Similarity NPC469896
0.7163 Intermediate Similarity NPC157828
0.7162 Intermediate Similarity NPC314957
0.716 Intermediate Similarity NPC14812
0.7155 Intermediate Similarity NPC476492
0.715 Intermediate Similarity NPC15573
0.715 Intermediate Similarity NPC183662
0.715 Intermediate Similarity NPC217372
0.7149 Intermediate Similarity NPC475288
0.7143 Intermediate Similarity NPC54981
0.7143 Intermediate Similarity NPC82370
0.7131 Intermediate Similarity NPC28945
0.713 Intermediate Similarity NPC11445
0.7129 Intermediate Similarity NPC311276
0.7125 Intermediate Similarity NPC477108
0.7125 Intermediate Similarity NPC477109
0.7125 Intermediate Similarity NPC477107
0.7124 Intermediate Similarity NPC313640
0.7117 Intermediate Similarity NPC225821
0.7117 Intermediate Similarity NPC477065
0.7097 Intermediate Similarity NPC229332
0.7093 Intermediate Similarity NPC36405
0.7087 Intermediate Similarity NPC2395
0.7085 Intermediate Similarity NPC70922
0.7085 Intermediate Similarity NPC258062
0.7085 Intermediate Similarity NPC80597
0.7085 Intermediate Similarity NPC75540
0.7085 Intermediate Similarity NPC212376
0.7085 Intermediate Similarity NPC211572
0.7083 Intermediate Similarity NPC17487
0.7083 Intermediate Similarity NPC201831
0.7081 Intermediate Similarity NPC16659
0.7078 Intermediate Similarity NPC49196
0.7078 Intermediate Similarity NPC195461

  Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC155444 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.9752 High Similarity NPD7780 Approved
0.9752 High Similarity NPD7781 Approved
0.951 High Similarity NPD7730 Approved
0.951 High Similarity NPD7731 Approved
0.9417 High Similarity NPD7824 Approved
0.9412 High Similarity NPD7271 Approved
0.9282 High Similarity NPD7790 Approved
0.9282 High Similarity NPD7789 Approved
0.9282 High Similarity NPD7953 Approved
0.9282 High Similarity NPD7952 Approved
0.9282 High Similarity NPD7791 Approved
0.9282 High Similarity NPD7951 Approved
0.9282 High Similarity NPD7950 Approved
0.9175 High Similarity NPD7717 Approved
0.9175 High Similarity NPD7716 Approved
0.815 Intermediate Similarity NPD3961 Discontinued
0.8019 Intermediate Similarity NPD7621 Clinical (unspecified phase)
0.8009 Intermediate Similarity NPD8493 Clinical (unspecified phase)
0.7907 Intermediate Similarity NPD7594 Clinical (unspecified phase)
0.78 Intermediate Similarity NPD4079 Approved
0.78 Intermediate Similarity NPD4076 Approved
0.7794 Intermediate Similarity NPD3486 Clinical (unspecified phase)
0.7789 Intermediate Similarity NPD4075 Phase 2
0.7778 Intermediate Similarity NPD7470 Discontinued
0.7763 Intermediate Similarity NPD8406 Clinical (unspecified phase)
0.7751 Intermediate Similarity NPD6664 Approved
0.775 Intermediate Similarity NPD3506 Approved
0.775 Intermediate Similarity NPD3505 Approved
0.7656 Intermediate Similarity NPD7619 Phase 3
0.7656 Intermediate Similarity NPD7618 Phase 3
0.7628 Intermediate Similarity NPD7957 Phase 1
0.7628 Intermediate Similarity NPD7958 Clinical (unspecified phase)
0.7606 Intermediate Similarity NPD7903 Clinical (unspecified phase)
0.7598 Intermediate Similarity NPD5728 Clinical (unspecified phase)
0.7593 Intermediate Similarity NPD6838 Clinical (unspecified phase)
0.7581 Intermediate Similarity NPD8272 Phase 2
0.758 Intermediate Similarity NPD8093 Discontinued
0.7574 Intermediate Similarity NPD6203 Clinical (unspecified phase)
0.7569 Intermediate Similarity NPD7998 Clinical (unspecified phase)
0.7568 Intermediate Similarity NPD8405 Clinical (unspecified phase)
0.7534 Intermediate Similarity NPD8013 Clinical (unspecified phase)
0.7524 Intermediate Similarity NPD6610 Clinical (unspecified phase)
0.7511 Intermediate Similarity NPD7971 Clinical (unspecified phase)
0.7511 Intermediate Similarity NPD7970 Approved
0.7489 Intermediate Similarity NPD7809 Clinical (unspecified phase)
0.7489 Intermediate Similarity NPD7711 Discontinued
0.7488 Intermediate Similarity NPD4181 Approved
0.7475 Intermediate Similarity NPD4128 Approved
0.7452 Intermediate Similarity NPD8431 Approved
0.7444 Intermediate Similarity NPD8000 Clinical (unspecified phase)
0.7432 Intermediate Similarity NPD8112 Clinical (unspecified phase)
0.7431 Intermediate Similarity NPD8322 Phase 2
0.7419 Intermediate Similarity NPD5426 Phase 3
0.7407 Intermediate Similarity NPD8073 Approved
0.7406 Intermediate Similarity NPD7944 Discontinued
0.7397 Intermediate Similarity NPD7947 Clinical (unspecified phase)
0.7387 Intermediate Similarity NPD8094 Discontinued
0.7373 Intermediate Similarity NPD8072 Approved
0.7363 Intermediate Similarity NPD4640 Approved
0.7363 Intermediate Similarity NPD4639 Approved
0.7363 Intermediate Similarity NPD4638 Approved
0.7353 Intermediate Similarity NPD6375 Clinical (unspecified phase)
0.735 Intermediate Similarity NPD5744 Clinical (unspecified phase)
0.7327 Intermediate Similarity NPD5721 Clinical (unspecified phase)
0.7317 Intermediate Similarity NPD2144 Approved
0.73 Intermediate Similarity NPD3323 Discontinued
0.73 Intermediate Similarity NPD3583 Phase 2
0.7295 Intermediate Similarity NPD3038 Discontinued
0.7294 Intermediate Similarity NPD5487 Phase 1
0.7289 Intermediate Similarity NPD7823 Clinical (unspecified phase)
0.7284 Intermediate Similarity NPD8317 Phase 2
0.7284 Intermediate Similarity NPD8316 Phase 2
0.7277 Intermediate Similarity NPD4779 Clinical (unspecified phase)
0.7269 Intermediate Similarity NPD6248 Phase 2
0.7269 Intermediate Similarity NPD6249 Phase 2
0.7269 Intermediate Similarity NPD6661 Clinical (unspecified phase)
0.7264 Intermediate Similarity NPD6180 Clinical (unspecified phase)
0.7261 Intermediate Similarity NPD7603 Discontinued
0.726 Intermediate Similarity NPD2092 Phase 2
0.726 Intermediate Similarity NPD2094 Phase 2
0.726 Intermediate Similarity NPD2095 Phase 2
0.726 Intermediate Similarity NPD7712 Clinical (unspecified phase)
0.7257 Intermediate Similarity NPD6578 Clinical (unspecified phase)
0.7251 Intermediate Similarity NPD8110 Clinical (unspecified phase)
0.7246 Intermediate Similarity NPD6595 Phase 3
0.7241 Intermediate Similarity NPD4184 Clinical (unspecified phase)
0.7237 Intermediate Similarity NPD6615 Clinical (unspecified phase)
0.7225 Intermediate Similarity NPD2091 Phase 2
0.7225 Intermediate Similarity NPD2096 Phase 2
0.7225 Intermediate Similarity NPD7483 Phase 2
0.7225 Intermediate Similarity NPD7482 Phase 2
0.722 Intermediate Similarity NPD482 Approved
0.7207 Intermediate Similarity NPD5835 Phase 3
0.7207 Intermediate Similarity NPD5834 Phase 3
0.7184 Intermediate Similarity NPD749 Clinical (unspecified phase)
0.7163 Intermediate Similarity NPD8464 Clinical (unspecified phase)
0.7156 Intermediate Similarity NPD6217 Discontinued
0.7156 Intermediate Similarity NPD4426 Clinical (unspecified phase)
0.7143 Intermediate Similarity NPD3607 Clinical (unspecified phase)
0.7137 Intermediate Similarity NPD8271 Discontinued
0.7137 Intermediate Similarity NPD8258 Clinical (unspecified phase)
0.7137 Intermediate Similarity NPD8257 Approved
0.7137 Intermediate Similarity NPD8256 Approved
0.7123 Intermediate Similarity NPD7727 Phase 2
0.7112 Intermediate Similarity NPD8289 Discontinued
0.7104 Intermediate Similarity NPD8114 Approved
0.7104 Intermediate Similarity NPD8115 Approved
0.7098 Intermediate Similarity NPD4900 Clinical (unspecified phase)
0.7089 Intermediate Similarity NPD7233 Approved
0.7089 Intermediate Similarity NPD7234 Approved
0.7087 Intermediate Similarity NPD750 Phase 2
0.7085 Intermediate Similarity NPD7666 Phase 3
0.7085 Intermediate Similarity NPD7665 Phase 2
0.7081 Intermediate Similarity NPD6277 Clinical (unspecified phase)
0.7078 Intermediate Similarity NPD4601 Approved
0.7078 Intermediate Similarity NPD4600 Approved
0.7076 Intermediate Similarity NPD5040 Clinical (unspecified phase)
0.7072 Intermediate Similarity NPD4862 Clinical (unspecified phase)
0.7072 Intermediate Similarity NPD7001 Phase 3
0.707 Intermediate Similarity NPD6665 Discontinued
0.7064 Intermediate Similarity NPD7688 Phase 1
0.7064 Intermediate Similarity NPD8372 Clinical (unspecified phase)
0.7056 Intermediate Similarity NPD6281 Approved
0.7054 Intermediate Similarity NPD2125 Clinical (unspecified phase)
0.7053 Intermediate Similarity NPD5065 Approved
0.7045 Intermediate Similarity NPD5017 Discontinued
0.7039 Intermediate Similarity NPD3609 Approved
0.7039 Intermediate Similarity NPD3610 Approved
0.7035 Intermediate Similarity NPD8458 Clinical (unspecified phase)
0.7035 Intermediate Similarity NPD7573 Discontinued
0.7034 Intermediate Similarity NPD8119 Discontinued
0.7032 Intermediate Similarity NPD7000 Clinical (unspecified phase)
0.7032 Intermediate Similarity NPD6999 Discontinued
0.7027 Intermediate Similarity NPD5901 Discontinued
0.7023 Intermediate Similarity NPD6630 Clinical (unspecified phase)
0.7022 Intermediate Similarity NPD7825 Clinical (unspecified phase)
0.7018 Intermediate Similarity NPD6206 Phase 1
0.7005 Intermediate Similarity NPD4112 Clinical (unspecified phase)
0.7005 Intermediate Similarity NPD4427 Phase 2
0.7004 Intermediate Similarity NPD8488 Clinical (unspecified phase)
0.7 Intermediate Similarity NPD8248 Clinical (unspecified phase)
0.6996 Remote Similarity NPD7393 Clinical (unspecified phase)
0.6979 Remote Similarity NPD5559 Phase 2
0.6977 Remote Similarity NPD4499 Approved
0.6972 Remote Similarity NPD6449 Clinical (unspecified phase)
0.6972 Remote Similarity NPD7818 Clinical (unspecified phase)
0.6968 Remote Similarity NPD7817 Phase 1
0.6963 Remote Similarity NPD6141 Clinical (unspecified phase)
0.6955 Remote Similarity NPD3800 Clinical (unspecified phase)
0.6944 Remote Similarity NPD3785 Clinical (unspecified phase)
0.6941 Remote Similarity NPD7948 Phase 1
0.6936 Remote Similarity NPD6978 Phase 2
0.6936 Remote Similarity NPD6977 Clinical (unspecified phase)
0.6933 Remote Similarity NPD2509 Approved
0.6933 Remote Similarity NPD2510 Approved
0.693 Remote Similarity NPD4334 Discontinued
0.6927 Remote Similarity NPD4602 Approved
0.6923 Remote Similarity NPD6976 Clinical (unspecified phase)
0.6923 Remote Similarity NPD6479 Discontinued
0.6916 Remote Similarity NPD5820 Clinical (unspecified phase)
0.6916 Remote Similarity NPD5444 Phase 1
0.6904 Remote Similarity NPD8329 Phase 3
0.6901 Remote Similarity NPD7564 Discontinued
0.6885 Remote Similarity NPD7921 Approved
0.6884 Remote Similarity NPD3100 Discontinued
0.688 Remote Similarity NPD6849 Phase 2
0.688 Remote Similarity NPD6850 Phase 2
0.688 Remote Similarity NPD6173 Approved
0.6872 Remote Similarity NPD6204 Clinical (unspecified phase)
0.687 Remote Similarity NPD8523 Approved
0.687 Remote Similarity NPD7543 Phase 2
0.6861 Remote Similarity NPD6268 Phase 1
0.6861 Remote Similarity NPD6269 Clinical (unspecified phase)
0.6852 Remote Similarity NPD6965 Clinical (unspecified phase)
0.6849 Remote Similarity NPD7024 Clinical (unspecified phase)
0.6844 Remote Similarity NPD4901 Clinical (unspecified phase)
0.6838 Remote Similarity NPD6995 Phase 1
0.6837 Remote Similarity NPD7026 Phase 2
0.6833 Remote Similarity NPD6261 Phase 3
0.683 Remote Similarity NPD2121 Clinical (unspecified phase)
0.6829 Remote Similarity NPD6771 Discontinued
0.6829 Remote Similarity NPD8250 Phase 2
0.6823 Remote Similarity NPD8279 Clinical (unspecified phase)
0.6813 Remote Similarity NPD7772 Phase 3
0.6812 Remote Similarity NPD6749 Phase 1
0.6812 Remote Similarity NPD4174 Clinical (unspecified phase)
0.681 Remote Similarity NPD5322 Clinical (unspecified phase)
0.6807 Remote Similarity NPD8374 Phase 3
0.68 Remote Similarity NPD8247 Approved
0.68 Remote Similarity NPD8246 Approved
0.68 Remote Similarity NPD4374 Clinical (unspecified phase)
0.68 Remote Similarity NPD8169 Discontinued
0.6797 Remote Similarity NPD3394 Approved
0.6797 Remote Similarity NPD3393 Approved
0.6797 Remote Similarity NPD3389 Approved
0.6794 Remote Similarity NPD5934 Clinical (unspecified phase)
0.6793 Remote Similarity NPD6165 Phase 2
0.6793 Remote Similarity NPD6164 Phase 2
0.6779 Remote Similarity NPD5069 Clinical (unspecified phase)
0.6779 Remote Similarity NPD5021 Discontinued

  Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data