Structure

Physi-Chem Properties

Molecular Weight:  1591.8
Volume:  1583.21
LogP:  0.993
LogD:  0.794
LogS:  -2.175
# Rotatable Bonds:  37
TPSA:  605.9
# H-Bond Aceptor:  37
# H-Bond Donor:  21
# Rings:  6
# Heavy Atoms:  37

MedChem Properties

QED Drug-Likeness Score:  0.017
Synthetic Accessibility Score:  7.401
Fsp3:  0.532
Lipinski Rule-of-5:  Rejected
Pfizer Rule:  Accepted
GSK Rule:  Rejected
BMS Rule:  1
Golden Triangle Rule:  Rejected
Chelating Alert:  0
PAINS Alert:  0

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

Caco-2 Permeability:  -1.623
MDCK Permeability:  0.0005523570580407977
Pgp-inhibitor:  0.05
Pgp-substrate:  1.0
Human Intestinal Absorption (HIA):  0.993
20% Bioavailability (F20%):  0.994
30% Bioavailability (F30%):  0.995

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):  0.905
Plasma Protein Binding (PPB):  34.20088195800781%
Volume Distribution (VD):  -0.026
Pgp-substrate:  30.363611221313477%

ADMET: Metabolism

CYP1A2-inhibitor:  0.0
CYP1A2-substrate:  0.0
CYP2C19-inhibitor:  0.001
CYP2C19-substrate:  0.013
CYP2C9-inhibitor:  0.001
CYP2C9-substrate:  0.014
CYP2D6-inhibitor:  0.0
CYP2D6-substrate:  0.011
CYP3A4-inhibitor:  0.009
CYP3A4-substrate:  0.0

ADMET: Excretion

Clearance (CL):  0.302
Half-life (T1/2):  0.712

ADMET: Toxicity

hERG Blockers:  0.0
Human Hepatotoxicity (H-HT):  1.0
Drug-inuced Liver Injury (DILI):  0.974
AMES Toxicity:  0.001
Rat Oral Acute Toxicity:  0.012
Maximum Recommended Daily Dose:  0.139
Skin Sensitization:  0.81
Carcinogencity:  0.031
Eye Corrosion:  0.003
Eye Irritation:  0.008
Respiratory Toxicity:  0.978

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  Natural Product: NPC75634

Natural Product ID:  NPC75634
Common Name*:   Sungsanpin
IUPAC Name:   (2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[2-[[(2S)-2-[[(2S)-2-[[(3S,6S,12S,19S,22S,25S)-3-(4-aminobutyl)-12-benzyl-22-[(2S)-butan-2-yl]-6-(hydroxymethyl)-2,5,8,11,14,17,21,24-octaoxo-1,4,7,10,13,16,20,23-octazabicyclo[23.3.0]octacosane-19-carbonyl]amino]-3-hydroxypropanoyl]amino]-3-phenylpropanoyl]amino]acetyl]amino]-4-methylpentanoyl]amino]-3-hydroxypropanoyl]amino]-3-(1H-indol-3-yl)propanoyl]amino]-4-methylpentanoic acid
Synonyms:  
Standard InCHIKey:  YXOZCEQVMZPWOG-YZZULCRUSA-N
Standard InCHI:  InChI=1S/C77H109N17O20/c1-7-44(6)65-75(111)89-55(34-61(98)80-36-62(99)84-52(31-45-19-10-8-11-20-45)66(102)81-38-64(101)85-57(39-95)71(107)86-50(25-16-17-27-78)76(112)94-28-18-26-60(94)74(110)93-65)70(106)92-58(40-96)72(108)87-53(32-46-21-12-9-13-22-46)67(103)82-37-63(100)83-51(29-42(2)3)68(104)91-59(41-97)73(109)88-54(69(105)90-56(77(113)114)30-43(4)5)33-47-35-79-49-24-15-14-23-48(47)49/h8-15,19-24,35,42-44,50-60,65,79,95-97H,7,16-18,25-34,36-41,78H2,1-6H3,(H,80,98)(H,81,102)(H,82,103)(H,83,100)(H,84,99)(H,85,101)(H,86,107)(H,87,108)(H,88,109)(H,89,111)(H,90,105)(H,91,104)(H,92,106)(H,93,110)(H,113,114)/t44-,50-,51-,52-,53-,54-,55-,56-,57-,58-,59-,60-,65-/m0/s1
SMILES:  NCCCC[C@@H]1N=C(O)[C@H](CO)N=C(O)CN=C(O)[C@@H](N=C(O)CN=C(C[C@H](N=C([C@@H](N=C([C@H]2N(C1=O)CCC2)O)[C@H](CC)C)O)C(=N[C@H](C(=N[C@H](C(=NCC(=N[C@H](C(=N[C@H](C(=N[C@H](C(=N[C@H](C(=O)O)CC(C)C)O)Cc1c[nH]c2c1cccc2)O)CO)O)CC(C)C)O)O)Cc1ccccc1)O)CO)O)O)Cc1ccccc1
Synthetic Gene Cluster:   n.a.
ChEMBL Identifier:   CHEMBL2381503
PubChem CID:   71713252
Chemical Classification**:  
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0003297] Organic Polymers
      • [CHEMONTID:0003298] Polypeptides

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10344559]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10344578]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10348041]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10604756]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10695669]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10724004]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10994816]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[11099231]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[11132958]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[11374972]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[11473415]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[14738393]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. Australian n.a. PMID[15497950]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[15813185]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[15844966]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[15974616]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[16180833]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[1666120]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[16724845]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[16830891]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[16872146]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17125235]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17315965]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17551212]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17608531]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17844998]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17887721]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17917237]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18044841]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. Indonesian n.a. PMID[18081255]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18081255]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18205372]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. Northwest Territories, Canada 1995 PMID[18327911]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18327911]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18666798]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18776684]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[19007176]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[19129624]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[19191549]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[19856955]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[19883065]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[20092333]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[20545334]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[20836523]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21028889]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21028891]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. mycelium n.a. PMID[21090727]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21314175]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. mycelium n.a. PMID[21639131]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21728289]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. latex n.a. PMID[21751787]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21807523]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21873059]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. latex n.a. PMID[21879726]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. mycelium n.a. PMID[22145663]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[22574670]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[22583058]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[22591466]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[22758660]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[22775474]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[23387796]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[23662937]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[24592993]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[24754815]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[24878306]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[24964393]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25211234]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25455147]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25495422]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25537064]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25918793]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25934225]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[26035239]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[26465675]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[26798949]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[26905826]
NPO40220 Streptomyces sp. KCB13F003 Strain Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[29083895]
NPO40220 Streptomyces sp. KCB13F003 Strain Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[30251851]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[31013087]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[31298537]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[31894983]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[32298122]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[8501018]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. mycelium n.a. PMID[8784423]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[8931733]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[8982334]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9031666]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9031676]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9066767]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9066768]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9186568]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9531983]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. mycelium n.a. PMID[9711246]

☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  NP Quantity Composition/Concentration

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference

☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT81 Cell Line A549 Homo sapiens Activity = 47.0 % PMID[452119]
NPT81 Cell Line A549 Homo sapiens Activity = 25.0 % PMID[452119]
NPT81 Cell Line A549 Homo sapiens Inhibition = 53.0 % PMID[452120]

☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

  Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC75634 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9223 High Similarity NPC54420
0.9188 High Similarity NPC478157
0.9128 High Similarity NPC162860
0.9128 High Similarity NPC478158
0.9115 High Similarity NPC155143
0.9105 High Similarity NPC473640
0.9062 High Similarity NPC475506
0.9058 High Similarity NPC100321
0.8955 High Similarity NPC281049
0.8947 High Similarity NPC478028
0.8883 High Similarity NPC213629
0.8863 High Similarity NPC478029
0.886 High Similarity NPC293917
0.8844 High Similarity NPC320968
0.8838 High Similarity NPC107077
0.8838 High Similarity NPC223791
0.8808 High Similarity NPC171317
0.88 High Similarity NPC110602
0.88 High Similarity NPC31385
0.88 High Similarity NPC75726
0.8737 High Similarity NPC323927
0.8731 High Similarity NPC473376
0.8724 High Similarity NPC476874
0.8677 High Similarity NPC94752
0.8663 High Similarity NPC54744
0.8629 High Similarity NPC193761
0.8586 High Similarity NPC321708
0.8585 High Similarity NPC477714
0.8558 High Similarity NPC64216
0.8531 High Similarity NPC326363
0.8447 Intermediate Similarity NPC477715
0.8438 Intermediate Similarity NPC17059
0.838 Intermediate Similarity NPC28945
0.8372 Intermediate Similarity NPC325976
0.8364 Intermediate Similarity NPC89987
0.8302 Intermediate Similarity NPC24370
0.8302 Intermediate Similarity NPC319232
0.8281 Intermediate Similarity NPC228835
0.8245 Intermediate Similarity NPC314603
0.8214 Intermediate Similarity NPC473763
0.8214 Intermediate Similarity NPC117244
0.8201 Intermediate Similarity NPC469938
0.8168 Intermediate Similarity NPC126709
0.8168 Intermediate Similarity NPC248041
0.8168 Intermediate Similarity NPC283219
0.8158 Intermediate Similarity NPC267885
0.8115 Intermediate Similarity NPC59269
0.8115 Intermediate Similarity NPC14113
0.8115 Intermediate Similarity NPC145885
0.8115 Intermediate Similarity NPC84827
0.8105 Intermediate Similarity NPC203468
0.8105 Intermediate Similarity NPC149155
0.8105 Intermediate Similarity NPC110500
0.8103 Intermediate Similarity NPC235684
0.8097 Intermediate Similarity NPC153400
0.8073 Intermediate Similarity NPC11126
0.8073 Intermediate Similarity NPC323752
0.8056 Intermediate Similarity NPC56109
0.8056 Intermediate Similarity NPC191382
0.8045 Intermediate Similarity NPC285343
0.8032 Intermediate Similarity NPC160105
0.8031 Intermediate Similarity NPC91179
0.8018 Intermediate Similarity NPC69843
0.8 Intermediate Similarity NPC165495
0.8 Intermediate Similarity NPC478006
0.7991 Intermediate Similarity NPC155444
0.7982 Intermediate Similarity NPC314882
0.798 Intermediate Similarity NPC470497
0.7979 Intermediate Similarity NPC213468
0.7962 Intermediate Similarity NPC471192
0.7959 Intermediate Similarity NPC15102
0.7952 Intermediate Similarity NPC229348
0.7944 Intermediate Similarity NPC473317
0.794 Intermediate Similarity NPC243716
0.7926 Intermediate Similarity NPC476491
0.7915 Intermediate Similarity NPC313640
0.791 Intermediate Similarity NPC294693
0.7909 Intermediate Similarity NPC220852
0.7905 Intermediate Similarity NPC6865
0.7905 Intermediate Similarity NPC153980
0.79 Intermediate Similarity NPC475969
0.79 Intermediate Similarity NPC475859
0.79 Intermediate Similarity NPC474877
0.7895 Intermediate Similarity NPC63751
0.7895 Intermediate Similarity NPC78020
0.7868 Intermediate Similarity NPC99939
0.7868 Intermediate Similarity NPC308931
0.7857 Intermediate Similarity NPC72956
0.7854 Intermediate Similarity NPC470730
0.7854 Intermediate Similarity NPC477175
0.7854 Intermediate Similarity NPC300183
0.7854 Intermediate Similarity NPC470729
0.7854 Intermediate Similarity NPC477176
0.7842 Intermediate Similarity NPC49954
0.7842 Intermediate Similarity NPC474561
0.7842 Intermediate Similarity NPC54988
0.7839 Intermediate Similarity NPC175474
0.7834 Intermediate Similarity NPC125597
0.7833 Intermediate Similarity NPC227582
0.783 Intermediate Similarity NPC125181
0.783 Intermediate Similarity NPC263117
0.783 Intermediate Similarity NPC242872
0.7828 Intermediate Similarity NPC63279
0.782 Intermediate Similarity NPC471194
0.782 Intermediate Similarity NPC471193
0.7818 Intermediate Similarity NPC477177
0.7806 Intermediate Similarity NPC233936
0.7805 Intermediate Similarity NPC252338
0.7799 Intermediate Similarity NPC314957
0.7795 Intermediate Similarity NPC219336
0.7793 Intermediate Similarity NPC470732
0.7793 Intermediate Similarity NPC297642
0.7793 Intermediate Similarity NPC470731
0.7783 Intermediate Similarity NPC165743
0.7773 Intermediate Similarity NPC477635
0.7773 Intermediate Similarity NPC477630
0.7764 Intermediate Similarity NPC478010
0.7764 Intermediate Similarity NPC478009
0.7745 Intermediate Similarity NPC262898
0.7744 Intermediate Similarity NPC15573
0.7744 Intermediate Similarity NPC183662
0.7744 Intermediate Similarity NPC217372
0.7727 Intermediate Similarity NPC33949
0.7722 Intermediate Similarity NPC315467
0.7717 Intermediate Similarity NPC214142
0.7716 Intermediate Similarity NPC71037
0.7713 Intermediate Similarity NPC469762
0.7708 Intermediate Similarity NPC201700
0.7707 Intermediate Similarity NPC470499
0.7707 Intermediate Similarity NPC52557
0.7703 Intermediate Similarity NPC63031
0.7696 Intermediate Similarity NPC179701
0.7692 Intermediate Similarity NPC95240
0.7692 Intermediate Similarity NPC322135
0.7689 Intermediate Similarity NPC82370
0.7688 Intermediate Similarity NPC280290
0.7684 Intermediate Similarity NPC282231
0.7682 Intermediate Similarity NPC261251
0.7679 Intermediate Similarity NPC314056
0.7674 Intermediate Similarity NPC79386
0.767 Intermediate Similarity NPC74413
0.7665 Intermediate Similarity NPC469896
0.766 Intermediate Similarity NPC469785
0.765 Intermediate Similarity NPC62749
0.765 Intermediate Similarity NPC474707
0.765 Intermediate Similarity NPC315555
0.7647 Intermediate Similarity NPC100547
0.7644 Intermediate Similarity NPC476073
0.7633 Intermediate Similarity NPC249150
0.7633 Intermediate Similarity NPC81654
0.7633 Intermediate Similarity NPC49196
0.7633 Intermediate Similarity NPC313985
0.7633 Intermediate Similarity NPC79129
0.7633 Intermediate Similarity NPC195461
0.7632 Intermediate Similarity NPC279918
0.7624 Intermediate Similarity NPC95783
0.7623 Intermediate Similarity NPC321592
0.7623 Intermediate Similarity NPC54803
0.7621 Intermediate Similarity NPC131887
0.7621 Intermediate Similarity NPC50503
0.7614 Intermediate Similarity NPC55772
0.7613 Intermediate Similarity NPC223409
0.7606 Intermediate Similarity NPC70922
0.7606 Intermediate Similarity NPC80597
0.7606 Intermediate Similarity NPC211572
0.7606 Intermediate Similarity NPC212376
0.7606 Intermediate Similarity NPC75540
0.7603 Intermediate Similarity NPC321939
0.7602 Intermediate Similarity NPC304307
0.7602 Intermediate Similarity NPC118559
0.7602 Intermediate Similarity NPC124920
0.7602 Intermediate Similarity NPC34580
0.7593 Intermediate Similarity NPC238945
0.7588 Intermediate Similarity NPC163055
0.7583 Intermediate Similarity NPC477065
0.7583 Intermediate Similarity NPC478013
0.7578 Intermediate Similarity NPC14288
0.7576 Intermediate Similarity NPC300688
0.7574 Intermediate Similarity NPC173028
0.7574 Intermediate Similarity NPC65215
0.757 Intermediate Similarity NPC207020
0.7563 Intermediate Similarity NPC111275
0.7563 Intermediate Similarity NPC68354
0.7563 Intermediate Similarity NPC64436
0.756 Intermediate Similarity NPC260900
0.7558 Intermediate Similarity NPC473310
0.7555 Intermediate Similarity NPC477107
0.7555 Intermediate Similarity NPC477109
0.7555 Intermediate Similarity NPC477108
0.7553 Intermediate Similarity NPC469763
0.7553 Intermediate Similarity NPC73952
0.7553 Intermediate Similarity NPC469765
0.7553 Intermediate Similarity NPC469760
0.7553 Intermediate Similarity NPC469786
0.7553 Intermediate Similarity NPC25008
0.7553 Intermediate Similarity NPC259644
0.7552 Intermediate Similarity NPC194640
0.7552 Intermediate Similarity NPC311276
0.7546 Intermediate Similarity NPC36405
0.754 Intermediate Similarity NPC477633

  Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC75634 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8929 High Similarity NPD8493 Clinical (unspecified phase)
0.886 High Similarity NPD7621 Clinical (unspecified phase)
0.8731 High Similarity NPD8272 Phase 2
0.8657 High Similarity NPD8013 Clinical (unspecified phase)
0.8657 High Similarity NPD7470 Discontinued
0.8653 High Similarity NPD7944 Discontinued
0.8627 High Similarity NPD8406 Clinical (unspecified phase)
0.8515 High Similarity NPD7998 Clinical (unspecified phase)
0.8515 High Similarity NPD7809 Clinical (unspecified phase)
0.8439 Intermediate Similarity NPD7971 Clinical (unspecified phase)
0.8439 Intermediate Similarity NPD7970 Approved
0.8406 Intermediate Similarity NPD8405 Clinical (unspecified phase)
0.8325 Intermediate Similarity NPD5728 Clinical (unspecified phase)
0.8317 Intermediate Similarity NPD7957 Phase 1
0.8317 Intermediate Similarity NPD7958 Clinical (unspecified phase)
0.8308 Intermediate Similarity NPD8072 Approved
0.822 Intermediate Similarity NPD6595 Phase 3
0.8186 Intermediate Similarity NPD8322 Phase 2
0.8157 Intermediate Similarity NPD7789 Approved
0.8157 Intermediate Similarity NPD7953 Approved
0.8157 Intermediate Similarity NPD7951 Approved
0.8157 Intermediate Similarity NPD7790 Approved
0.8157 Intermediate Similarity NPD7791 Approved
0.8157 Intermediate Similarity NPD7950 Approved
0.8157 Intermediate Similarity NPD7952 Approved
0.8135 Intermediate Similarity NPD2094 Phase 2
0.8135 Intermediate Similarity NPD2092 Phase 2
0.8135 Intermediate Similarity NPD2095 Phase 2
0.8112 Intermediate Similarity NPD8110 Clinical (unspecified phase)
0.8105 Intermediate Similarity NPD482 Approved
0.8093 Intermediate Similarity NPD7731 Approved
0.8093 Intermediate Similarity NPD7730 Approved
0.8093 Intermediate Similarity NPD2091 Phase 2
0.8093 Intermediate Similarity NPD2096 Phase 2
0.8086 Intermediate Similarity NPD8112 Clinical (unspecified phase)
0.8079 Intermediate Similarity NPD8073 Approved
0.8077 Intermediate Similarity NPD7594 Clinical (unspecified phase)
0.8063 Intermediate Similarity NPD749 Clinical (unspecified phase)
0.8061 Intermediate Similarity NPD8431 Approved
0.8056 Intermediate Similarity NPD7780 Approved
0.8056 Intermediate Similarity NPD7781 Approved
0.8047 Intermediate Similarity NPD7711 Discontinued
0.803 Intermediate Similarity NPD7903 Clinical (unspecified phase)
0.8018 Intermediate Similarity NPD7824 Approved
0.8009 Intermediate Similarity NPD8000 Clinical (unspecified phase)
0.8 Intermediate Similarity NPD7618 Phase 3
0.8 Intermediate Similarity NPD7271 Approved
0.8 Intermediate Similarity NPD7619 Phase 3
0.799 Intermediate Similarity NPD8093 Discontinued
0.7981 Intermediate Similarity NPD7825 Clinical (unspecified phase)
0.7971 Intermediate Similarity NPD7947 Clinical (unspecified phase)
0.7959 Intermediate Similarity NPD6610 Clinical (unspecified phase)
0.7958 Intermediate Similarity NPD750 Phase 2
0.7947 Intermediate Similarity NPD4184 Clinical (unspecified phase)
0.7927 Intermediate Similarity NPD6203 Clinical (unspecified phase)
0.7846 Intermediate Similarity NPD8464 Clinical (unspecified phase)
0.7837 Intermediate Similarity NPD6838 Clinical (unspecified phase)
0.7826 Intermediate Similarity NPD5426 Phase 3
0.7826 Intermediate Similarity NPD7712 Clinical (unspecified phase)
0.7798 Intermediate Similarity NPD7603 Discontinued
0.7783 Intermediate Similarity NPD8094 Discontinued
0.774 Intermediate Similarity NPD8115 Approved
0.774 Intermediate Similarity NPD8114 Approved
0.7703 Intermediate Similarity NPD4862 Clinical (unspecified phase)
0.7696 Intermediate Similarity NPD7818 Clinical (unspecified phase)
0.7653 Intermediate Similarity NPD8458 Clinical (unspecified phase)
0.7633 Intermediate Similarity NPD4601 Approved
0.7633 Intermediate Similarity NPD4600 Approved
0.7617 Intermediate Similarity NPD8488 Clinical (unspecified phase)
0.7614 Intermediate Similarity NPD4076 Approved
0.7614 Intermediate Similarity NPD4079 Approved
0.7612 Intermediate Similarity NPD3961 Discontinued
0.7612 Intermediate Similarity NPD6141 Clinical (unspecified phase)
0.7596 Intermediate Similarity NPD7817 Phase 1
0.7573 Intermediate Similarity NPD7948 Phase 1
0.7563 Intermediate Similarity NPD3506 Approved
0.7563 Intermediate Similarity NPD3505 Approved
0.7524 Intermediate Similarity NPD6449 Clinical (unspecified phase)
0.7512 Intermediate Similarity NPD7727 Phase 2
0.75 Intermediate Similarity NPD8372 Clinical (unspecified phase)
0.7488 Intermediate Similarity NPD6664 Approved
0.7488 Intermediate Similarity NPD5901 Discontinued
0.7477 Intermediate Similarity NPD8289 Discontinued
0.7476 Intermediate Similarity NPD5721 Clinical (unspecified phase)
0.7475 Intermediate Similarity NPD2144 Approved
0.7464 Intermediate Similarity NPD8248 Clinical (unspecified phase)
0.7463 Intermediate Similarity NPD6665 Discontinued
0.7453 Intermediate Similarity NPD7001 Phase 3
0.745 Intermediate Similarity NPD3038 Discontinued
0.7438 Intermediate Similarity NPD3486 Clinical (unspecified phase)
0.7436 Intermediate Similarity NPD5069 Clinical (unspecified phase)
0.7431 Intermediate Similarity NPD7823 Clinical (unspecified phase)
0.7424 Intermediate Similarity NPD4075 Phase 2
0.7416 Intermediate Similarity NPD7000 Clinical (unspecified phase)
0.7416 Intermediate Similarity NPD6999 Discontinued
0.7416 Intermediate Similarity NPD6661 Clinical (unspecified phase)
0.7415 Intermediate Similarity NPD6180 Clinical (unspecified phase)
0.7389 Intermediate Similarity NPD6217 Discontinued
0.7383 Intermediate Similarity NPD7666 Phase 3
0.7383 Intermediate Similarity NPD7665 Phase 2
0.7374 Intermediate Similarity NPD5065 Approved
0.7374 Intermediate Similarity NPD5322 Clinical (unspecified phase)
0.7368 Intermediate Similarity NPD53 Approved
0.7368 Intermediate Similarity NPD7778 Approved
0.7368 Intermediate Similarity NPD7777 Approved
0.7352 Intermediate Similarity NPD8258 Clinical (unspecified phase)
0.7352 Intermediate Similarity NPD5818 Discontinued
0.7352 Intermediate Similarity NPD8256 Approved
0.7352 Intermediate Similarity NPD8257 Approved
0.7336 Intermediate Similarity NPD8410 Clinical (unspecified phase)
0.7309 Intermediate Similarity NPD7717 Approved
0.7309 Intermediate Similarity NPD7716 Approved
0.7304 Intermediate Similarity NPD4426 Clinical (unspecified phase)
0.7302 Intermediate Similarity NPD2510 Approved
0.7302 Intermediate Similarity NPD2509 Approved
0.7299 Intermediate Similarity NPD484 Approved
0.7291 Intermediate Similarity NPD6178 Phase 3
0.729 Intermediate Similarity NPD6732 Clinical (unspecified phase)
0.7282 Intermediate Similarity NPD4499 Approved
0.7264 Intermediate Similarity NPD5017 Discontinued
0.725 Intermediate Similarity NPD6375 Clinical (unspecified phase)
0.7246 Intermediate Similarity NPD6630 Clinical (unspecified phase)
0.7243 Intermediate Similarity NPD8169 Discontinued
0.7241 Intermediate Similarity NPD7576 Discontinued
0.724 Intermediate Similarity NPD7878 Phase 2
0.724 Intermediate Similarity NPD6578 Clinical (unspecified phase)
0.7238 Intermediate Similarity NPD5003 Discontinued
0.7237 Intermediate Similarity NPD8119 Discontinued
0.7206 Intermediate Similarity NPD7564 Discontinued
0.7196 Intermediate Similarity NPD2121 Clinical (unspecified phase)
0.7193 Intermediate Similarity NPD7688 Phase 1
0.7192 Intermediate Similarity NPD8408 Discontinued
0.7178 Intermediate Similarity NPD8386 Phase 2
0.7172 Intermediate Similarity NPD4639 Approved
0.7172 Intermediate Similarity NPD5021 Discontinued
0.7172 Intermediate Similarity NPD4640 Approved
0.7172 Intermediate Similarity NPD4638 Approved
0.7163 Intermediate Similarity NPD8098 Approved
0.715 Intermediate Similarity NPD6965 Clinical (unspecified phase)
0.715 Intermediate Similarity NPD7234 Approved
0.715 Intermediate Similarity NPD7233 Approved
0.7149 Intermediate Similarity NPD8374 Phase 3
0.7143 Intermediate Similarity NPD5897 Approved
0.7143 Intermediate Similarity NPD6452 Discontinued
0.7143 Intermediate Similarity NPD5899 Approved
0.7143 Intermediate Similarity NPD5898 Approved
0.7137 Intermediate Similarity NPD6165 Phase 2
0.7137 Intermediate Similarity NPD6164 Phase 2
0.7136 Intermediate Similarity NPD4500 Approved
0.7136 Intermediate Similarity NPD4501 Approved
0.7129 Intermediate Similarity NPD4181 Approved
0.7129 Intermediate Similarity NPD5505 Discontinued
0.7118 Intermediate Similarity NPD8316 Phase 2
0.7118 Intermediate Similarity NPD8317 Phase 2
0.7117 Intermediate Similarity NPD8271 Discontinued
0.7116 Intermediate Similarity NPD6176 Phase 1
0.7114 Intermediate Similarity NPD4128 Approved
0.7101 Intermediate Similarity NPD8021 Approved
0.7101 Intermediate Similarity NPD8020 Approved
0.71 Intermediate Similarity NPD8329 Phase 3
0.7092 Intermediate Similarity NPD2511 Approved
0.7089 Intermediate Similarity NPD8250 Phase 2
0.7079 Intermediate Similarity NPD8022 Clinical (unspecified phase)
0.7072 Intermediate Similarity NPD3389 Approved
0.7072 Intermediate Similarity NPD3394 Approved
0.7072 Intermediate Similarity NPD3393 Approved
0.7067 Intermediate Similarity NPD6615 Clinical (unspecified phase)
0.7061 Intermediate Similarity NPD8430 Approved
0.7059 Intermediate Similarity NPD6277 Clinical (unspecified phase)
0.7056 Intermediate Similarity NPD8026 Phase 1
0.7056 Intermediate Similarity NPD8047 Clinical (unspecified phase)
0.7045 Intermediate Similarity NPD7070 Clinical (unspecified phase)
0.7044 Intermediate Similarity NPD7865 Approved
0.7044 Intermediate Similarity NPD8123 Approved
0.7044 Intermediate Similarity NPD8122 Approved
0.704 Intermediate Similarity NPD8326 Phase 3
0.704 Intermediate Similarity NPD8327 Clinical (unspecified phase)
0.704 Intermediate Similarity NPD8325 Phase 3
0.7037 Intermediate Similarity NPD5487 Phase 1
0.7035 Intermediate Similarity NPD4174 Clinical (unspecified phase)
0.7035 Intermediate Similarity NPD6995 Phase 1
0.7035 Intermediate Similarity NPD8356 Approved
0.7035 Intermediate Similarity NPD6824 Clinical (unspecified phase)
0.7033 Intermediate Similarity NPD8284 Discontinued
0.7031 Intermediate Similarity NPD4374 Clinical (unspecified phase)
0.7028 Intermediate Similarity NPD6226 Phase 3
0.7026 Intermediate Similarity NPD276 Clinical (unspecified phase)
0.702 Intermediate Similarity NPD3323 Discontinued
0.702 Intermediate Similarity NPD3583 Phase 2
0.7014 Intermediate Similarity NPD5575 Clinical (unspecified phase)
0.7009 Intermediate Similarity NPD6249 Phase 2
0.7009 Intermediate Similarity NPD6248 Phase 2
0.7005 Intermediate Similarity NPD5555 Phase 1
0.7004 Intermediate Similarity NPD6173 Approved
0.7 Intermediate Similarity NPD2844 Phase 3
0.7 Intermediate Similarity NPD8240 Discontinued
0.699 Remote Similarity NPD4326 Phase 2
0.6986 Remote Similarity NPD4334 Discontinued
0.6985 Remote Similarity NPD5744 Clinical (unspecified phase)
0.6983 Remote Similarity NPD5040 Clinical (unspecified phase)

  Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data