Structure

Physi-Chem Properties

Molecular Weight:  708.25
Volume:  681.361
LogP:  5.571
LogD:  4.554
LogS:  -4.353
# Rotatable Bonds:  3
TPSA:  140.83
# H-Bond Aceptor:  10
# H-Bond Donor:  4
# Rings:  4
# Heavy Atoms:  11

MedChem Properties

QED Drug-Likeness Score:  0.203
Synthetic Accessibility Score:  5.212
Fsp3:  0.444
Lipinski Rule-of-5:  Rejected
Pfizer Rule:  Accepted
GSK Rule:  Rejected
BMS Rule:  0
Golden Triangle Rule:  Rejected
Chelating Alert:  0
PAINS Alert:  0

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

Caco-2 Permeability:  -4.809
MDCK Permeability:  1.3110925465298351e-05
Pgp-inhibitor:  0.999
Pgp-substrate:  0.066
Human Intestinal Absorption (HIA):  0.025
20% Bioavailability (F20%):  0.004
30% Bioavailability (F30%):  0.871

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):  0.021
Plasma Protein Binding (PPB):  98.08868408203125%
Volume Distribution (VD):  0.359
Pgp-substrate:  2.317056179046631%

ADMET: Metabolism

CYP1A2-inhibitor:  0.031
CYP1A2-substrate:  0.081
CYP2C19-inhibitor:  0.862
CYP2C19-substrate:  0.081
CYP2C9-inhibitor:  0.911
CYP2C9-substrate:  0.951
CYP2D6-inhibitor:  0.143
CYP2D6-substrate:  0.393
CYP3A4-inhibitor:  0.969
CYP3A4-substrate:  0.526

ADMET: Excretion

Clearance (CL):  3.134
Half-life (T1/2):  0.468

ADMET: Toxicity

hERG Blockers:  0.106
Human Hepatotoxicity (H-HT):  0.962
Drug-inuced Liver Injury (DILI):  0.968
AMES Toxicity:  0.007
Rat Oral Acute Toxicity:  0.754
Maximum Recommended Daily Dose:  0.962
Skin Sensitization:  0.189
Carcinogencity:  0.102
Eye Corrosion:  0.003
Eye Irritation:  0.006
Respiratory Toxicity:  0.138

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs  

  Natural Product: NPC118559

Natural Product ID:  NPC118559
Common Name*:   Jaspamide
IUPAC Name:   (4R,7R,10S,13S,15E,17R,19S)-7-[(2-bromo-1H-indol-3-yl)methyl]-4-(4-hydroxyphenyl)-8,10,13,15,17,19-hexamethyl-1-oxa-5,8,11-triazacyclononadec-15-ene-2,6,9,12-tetrone
Synonyms:   Jaspamide; Jasplakinolide
Standard InCHIKey:  GQWYWHOHRVVHAP-DHKPLNAMSA-N
Standard InCHI:  InChI=1S/C36H45BrN4O6/c1-20-15-21(2)17-23(4)47-32(43)19-30(25-11-13-26(42)14-12-25)40-35(45)31(18-28-27-9-7-8-10-29(27)39-33(28)37)41(6)36(46)24(5)38-34(44)22(3)16-20/h7-15,21-24,30-31,39,42H,16-19H2,1-6H3,(H,38,44)(H,40,45)/b20-15+/t21-,22-,23-,24-,30+,31+/m0/s1
SMILES:  C[C@@H]1OC(=O)C[C@@H](N=C(O)[C@@H](Cc2c(Br)[nH]c3c2cccc3)N(C)C(=O)[C@@H](N=C([C@H](C/C(=C/[C@@H](C1)C)/C)C)O)C)c1ccc(cc1)O
Synthetic Gene Cluster:   n.a.
ChEMBL Identifier:   CHEMBL257166
PubChem CID:   9831636
Chemical Classification**:  
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0000264] Organic acids and derivatives
      • [CHEMONTID:0001813] Peptidomimetics
        • [CHEMONTID:0002010] Hybrid peptides

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO11484 Jaspis splendens Species Ancorinidae Eukaryota n.a. n.a. n.a. DOI[10.1016/j.tet.2007.03.162]
NPO11484 Jaspis splendens Species Ancorinidae Eukaryota n.a. n.a. n.a. DOI[10.1016/j.tet.2008.05.037]
NPO11484 Jaspis splendens Species Ancorinidae Eukaryota n.a. n.a. n.a. DOI[10.1016/j.tet.2008.10.076]
NPO11484 Jaspis splendens Species Ancorinidae Eukaryota n.a. n.a. n.a. PMID[10075778]
NPO32842 jaspis spp. Species Ancorinidae Eukaryota n.a. east coast of Malaysia 1994 PMID[18327911]
NPO11484 Jaspis splendens Species Ancorinidae Eukaryota n.a. Fiji (S 1822.28', E 17758.87') 2000-FEB PMID[21241058]
NPO11484 Jaspis splendens Species Ancorinidae Eukaryota n.a. n.a. n.a. PMID[21241058]
NPO33106 pipestela candelabra Species n.a. n.a. n.a. Pacific n.a. PMID[22364566]
NPO33669 Jaspis johnstoni Species Ancorinidae Eukaryota n.a. n.a. n.a. PMID[24020843]
NPO11484 Jaspis splendens Species Ancorinidae Eukaryota n.a. n.a. n.a. PMID[26883470]
NPO33669 Jaspis johnstoni Species Ancorinidae Eukaryota n.a. n.a. n.a. PMID[2693614]
NPO11484 Jaspis splendens Species Ancorinidae Eukaryota n.a. n.a. n.a. Database[UNPD]

☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  NP Quantity Composition/Concentration

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference

☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT168 Cell Line P388 Mus musculus Activity = 0.008 ug ml-1 PMID[518928]
NPT1917 Cell Line CA46 Homo sapiens IC50 = 30.0 nM PMID[518931]
NPT393 Cell Line HCT-116 Homo sapiens GI50 = 100.0 nM PMID[518933]
NPT379 Cell Line HOP-62 Homo sapiens GI50 = 150.0 nM PMID[518933]
NPT148 Cell Line HCT-15 Homo sapiens GI50 = 690.0 nM PMID[518933]
NPT374 Cell Line SF-539 Homo sapiens GI50 = 300.0 nM PMID[518933]
NPT387 Cell Line M14 Homo sapiens GI50 = 56.0 nM PMID[518933]
NPT377 Cell Line OVCAR-3 Homo sapiens GI50 = 40.0 nM PMID[518933]
NPT401 Cell Line 786-0 Homo sapiens GI50 = 20.0 nM PMID[518933]
NPT1917 Cell Line CA46 Homo sapiens IC50 = 10.0 nM PMID[518934]
NPT306 Cell Line PC-3 Homo sapiens GI50 = 65000.0 nM PMID[518935]
NPT858 Cell Line LNCaP Homo sapiens GI50 = 41000.0 nM PMID[518935]
NPT393 Cell Line HCT-116 Homo sapiens GI50 = 40.0 nM PMID[518935]
NPT82 Cell Line MDA-MB-231 Homo sapiens GI50 = 10.0 nM PMID[518935]
NPT458 Cell Line IGROV-1 Homo sapiens GI50 = 20.0 nM PMID[518935]
NPT380 Cell Line U-251 Homo sapiens GI50 = 70.0 nM PMID[518935]
NPT455 Cell Line NCI-H522 Homo sapiens GI50 = 30.0 nM PMID[518935]
NPT90 Cell Line DU-145 Homo sapiens GI50 = 30.0 nM PMID[518935]
NPT376 Cell Line A498 Homo sapiens GI50 = 30.0 nM PMID[518935]
NPT390 Cell Line LOX IMVI Homo sapiens GI50 = 10.0 nM PMID[518935]
NPT393 Cell Line HCT-116 Homo sapiens TIME = 2.0 hr PMID[518935]
NPT393 Cell Line HCT-116 Homo sapiens TIME = 24.0 hr PMID[518935]
NPT393 Cell Line HCT-116 Homo sapiens TIME = 168.0 hr PMID[518935]
NPT367 Cell Line MDA-N Homo sapiens GI50 n.a. 83.37 nM PMID[518936]
NPT368 Cell Line SN12C Homo sapiens GI50 n.a. 360.58 nM PMID[518936]
NPT369 Cell Line ACHN Homo sapiens GI50 n.a. 199.07 nM PMID[518936]
NPT370 Cell Line NCI-H23 Homo sapiens GI50 n.a. 466.66 nM PMID[518936]
NPT371 Cell Line UO-31 Homo sapiens GI50 n.a. 191.87 nM PMID[518936]
NPT372 Cell Line HOP-92 Homo sapiens GI50 n.a. 236.59 nM PMID[518936]
NPT116 Cell Line HL-60 Homo sapiens GI50 n.a. 131.52 nM PMID[518936]
NPT90 Cell Line DU-145 Homo sapiens GI50 n.a. 59.43 nM PMID[518936]
NPT373 Cell Line SK-MEL-5 Homo sapiens GI50 n.a. 158.12 nM PMID[518936]
NPT374 Cell Line SF-539 Homo sapiens GI50 n.a. 24.95 nM PMID[518936]
NPT375 Cell Line Malme-3M Homo sapiens GI50 n.a. 147.91 nM PMID[518936]
NPT111 Cell Line K562 Homo sapiens GI50 n.a. 666.81 nM PMID[518936]
NPT376 Cell Line A498 Homo sapiens GI50 n.a. 22.44 nM PMID[518936]
NPT377 Cell Line OVCAR-3 Homo sapiens GI50 n.a. 139.0 nM PMID[518936]
NPT112 Cell Line MOLT-4 Homo sapiens GI50 n.a. 682.34 nM PMID[518936]
NPT379 Cell Line HOP-62 Homo sapiens GI50 n.a. 328.85 nM PMID[518936]
NPT378 Cell Line NCI/ADR-RES Homo sapiens GI50 n.a. 367.28 nM PMID[518936]
NPT381 Cell Line OVCAR-8 Homo sapiens GI50 n.a. 381.07 nM PMID[518936]
NPT380 Cell Line U-251 Homo sapiens GI50 n.a. 243.22 nM PMID[518936]
NPT382 Cell Line OVCAR-5 Homo sapiens GI50 n.a. 457.09 nM PMID[518936]
NPT383 Cell Line SNB-19 Homo sapiens GI50 n.a. 212.81 nM PMID[518936]
NPT572 Cell Line DMS-273 Homo sapiens GI50 n.a. 307.61 nM PMID[518936]
NPT82 Cell Line MDA-MB-231 Homo sapiens GI50 n.a. 28.71 nM PMID[518936]
NPT385 Cell Line SR Homo sapiens GI50 n.a. 57.81 nM PMID[518936]
NPT384 Cell Line TK-10 Homo sapiens GI50 n.a. 293.76 nM PMID[518936]
NPT573 Cell Line M19-MEL Homo sapiens GI50 n.a. 788.86 nM PMID[518936]
NPT323 Cell Line SW-620 Homo sapiens GI50 n.a. 152.41 nM PMID[518936]
NPT386 Cell Line KM12 Homo sapiens GI50 n.a. 263.63 nM PMID[518936]
NPT455 Cell Line NCI-H522 Homo sapiens GI50 n.a. 203.24 nM PMID[518936]
NPT387 Cell Line M14 Homo sapiens GI50 n.a. 210.86 nM PMID[518936]
NPT388 Cell Line NCI-H322M Homo sapiens GI50 n.a. 833.68 nM PMID[518936]
NPT574 Cell Line XF498 Homo sapiens GI50 n.a. 225.94 nM PMID[518936]
NPT389 Cell Line RPMI-8226 Homo sapiens GI50 n.a. 217.77 nM PMID[518936]
NPT456 Cell Line OVCAR-4 Homo sapiens GI50 n.a. 173.38 nM PMID[518936]
NPT390 Cell Line LOX IMVI Homo sapiens GI50 n.a. 121.62 nM PMID[518936]
NPT457 Cell Line BT-549 Homo sapiens GI50 n.a. 29.24 nM PMID[518936]
NPT147 Cell Line SK-MEL-2 Homo sapiens GI50 n.a. 25.82 nM PMID[518936]
NPT575 Cell Line KM-20L2 Homo sapiens GI50 n.a. 339.63 nM PMID[518936]
NPT391 Cell Line HCC 2998 Homo sapiens GI50 n.a. 49.89 nM PMID[518936]
NPT81 Cell Line A549 Homo sapiens GI50 n.a. 171.79 nM PMID[518936]
NPT392 Cell Line SNB-75 Homo sapiens GI50 n.a. 83.95 nM PMID[518936]
NPT148 Cell Line HCT-15 Homo sapiens GI50 n.a. 833.68 nM PMID[518936]
NPT393 Cell Line HCT-116 Homo sapiens GI50 n.a. 195.88 nM PMID[518936]
NPT395 Cell Line SF-268 Homo sapiens GI50 n.a. 138.68 nM PMID[518936]
NPT394 Cell Line EKVX Homo sapiens GI50 n.a. 274.79 nM PMID[518936]
NPT83 Cell Line MCF7 Homo sapiens GI50 n.a. 89.54 nM PMID[518936]
NPT306 Cell Line PC-3 Homo sapiens GI50 n.a. 66.68 nM PMID[518936]
NPT146 Cell Line SK-OV-3 Homo sapiens GI50 n.a. 184.93 nM PMID[518936]
NPT731 Cell Line LXFL 529 Homo sapiens GI50 n.a. 293.09 nM PMID[518936]
NPT576 Cell Line DMS-114 Homo sapiens GI50 n.a. 516.42 nM PMID[518936]
NPT396 Cell Line T47D Homo sapiens GI50 n.a. 51.17 nM PMID[518936]
NPT397 Cell Line NCI-H460 Homo sapiens GI50 n.a. 232.81 nM PMID[518936]
NPT398 Cell Line UACC-62 Homo sapiens GI50 n.a. 218.78 nM PMID[518936]
NPT308 Cell Line CAKI-1 Homo sapiens GI50 n.a. 92.04 nM PMID[518936]
NPT399 Cell Line SF-295 Homo sapiens GI50 n.a. 258.82 nM PMID[518936]
NPT400 Cell Line MDA-MB-435 Homo sapiens GI50 n.a. 62.95 nM PMID[518936]
NPT458 Cell Line IGROV-1 Homo sapiens GI50 n.a. 113.76 nM PMID[518936]
NPT402 Cell Line Hs-578T Homo sapiens GI50 n.a. 61.09 nM PMID[518936]
NPT401 Cell Line 786-0 Homo sapiens GI50 n.a. 127.94 nM PMID[518936]
NPT577 Cell Line RXF 631 Homo sapiens GI50 n.a. 297.85 nM PMID[518936]
NPT403 Cell Line UACC-257 Homo sapiens GI50 n.a. 110.15 nM PMID[518936]
NPT578 Cell Line SNB-78 Homo sapiens GI50 n.a. 374.11 nM PMID[518936]
NPT404 Cell Line CCRF-CEM Homo sapiens GI50 n.a. 20.89 nM PMID[518936]
NPT579 Cell Line DLD-1 Homo sapiens GI50 n.a. 843.33 nM PMID[518936]
NPT139 Cell Line HT-29 Homo sapiens GI50 n.a. 172.58 nM PMID[518936]
NPT405 Cell Line NCI-H226 Homo sapiens GI50 n.a. 245.47 nM PMID[518936]
NPT170 Cell Line SK-MEL-28 Homo sapiens GI50 n.a. 124.17 nM PMID[518936]
NPT406 Cell Line RXF 393 Homo sapiens GI50 n.a. 36.9 nM PMID[518936]
NPT407 Cell Line COLO 205 Homo sapiens GI50 n.a. 207.01 nM PMID[518936]
NPT732 Cell Line HOP-18 Homo sapiens GI50 n.a. 209.41 nM PMID[518936]
NPT91 Cell Line KB Homo sapiens Inhibition = 100.0 % PMID[518937]
NPT91 Cell Line KB Homo sapiens Inhibition = 99.0 % PMID[518937]
NPT91 Cell Line KB Homo sapiens IC50 = 13.0 nM PMID[518937]
NPT419 Organism Oryctolagus cuniculus Oryctolagus cuniculus IC50 > 500000.0 nM PMID[518927]
NPT20 Organism Candida albicans Candida albicans Activity = 50.0 % PMID[518929]
NPT27 Others Unspecified IC50 = 300.0 nM PMID[518931]
NPT2 Others Unspecified EC50 = 1900.0 nM PMID[518931]
NPT2 Others Unspecified EC50 = 6500.0 nM PMID[518931]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. IC50 = 0.36 ug.mL-1 PMID[518932]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. GI50 = 31.0 nM PMID[518933]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. GI50 = 170000.0 nM PMID[518935]
NPT486 Organism Toxoplasma gondii Toxoplasma gondii FC = 1.5 n.a. PMID[518938]
NPT486 Organism Toxoplasma gondii Toxoplasma gondii EC50 = 340.0 nM PMID[518938]
NPT20 Organism Candida albicans Candida albicans MIC = 25.0 ug.mL-1 PMID[518939]
NPT486 Organism Toxoplasma gondii Toxoplasma gondii EC50 = 30.0 nM PMID[518941]

☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

  Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC118559 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC124920
1.0 High Similarity NPC304307
1.0 High Similarity NPC34580
0.995 High Similarity NPC100547
0.9901 High Similarity NPC261251
0.9901 High Similarity NPC322135
0.9901 High Similarity NPC223409
0.9901 High Similarity NPC95240
0.9853 High Similarity NPC14288
0.9851 High Similarity NPC214142
0.9805 High Similarity NPC321592
0.9805 High Similarity NPC54803
0.9757 High Similarity NPC284888
0.971 High Similarity NPC245055
0.971 High Similarity NPC33064
0.9571 High Similarity NPC82472
0.9502 High Similarity NPC74969
0.9187 High Similarity NPC319232
0.9187 High Similarity NPC24370
0.9023 High Similarity NPC272549
0.893 High Similarity NPC323198
0.893 High Similarity NPC323752
0.8879 High Similarity NPC181081
0.8317 Intermediate Similarity NPC243716
0.8198 Intermediate Similarity NPC326363
0.8077 Intermediate Similarity NPC314882
0.8077 Intermediate Similarity NPC306376
0.8073 Intermediate Similarity NPC303658
0.8065 Intermediate Similarity NPC330009
0.8053 Intermediate Similarity NPC325976
0.8018 Intermediate Similarity NPC125597
0.7972 Intermediate Similarity NPC476098
0.7964 Intermediate Similarity NPC473317
0.7953 Intermediate Similarity NPC478158
0.7936 Intermediate Similarity NPC478157
0.793 Intermediate Similarity NPC220852
0.7904 Intermediate Similarity NPC28945
0.79 Intermediate Similarity NPC469928
0.7893 Intermediate Similarity NPC315467
0.7866 Intermediate Similarity NPC478006
0.7832 Intermediate Similarity NPC194740
0.7826 Intermediate Similarity NPC285343
0.7792 Intermediate Similarity NPC470784
0.7787 Intermediate Similarity NPC478009
0.7762 Intermediate Similarity NPC276517
0.7753 Intermediate Similarity NPC33949
0.7749 Intermediate Similarity NPC184680
0.7748 Intermediate Similarity NPC281049
0.7731 Intermediate Similarity NPC153400
0.7716 Intermediate Similarity NPC470785
0.7705 Intermediate Similarity NPC314056
0.7703 Intermediate Similarity NPC305984
0.7682 Intermediate Similarity NPC207020
0.7642 Intermediate Similarity NPC478010
0.7631 Intermediate Similarity NPC478011
0.7621 Intermediate Similarity NPC21638
0.7615 Intermediate Similarity NPC270918
0.7611 Intermediate Similarity NPC478013
0.7607 Intermediate Similarity NPC475816
0.7602 Intermediate Similarity NPC75634
0.76 Intermediate Similarity NPC314176
0.7597 Intermediate Similarity NPC184225
0.7593 Intermediate Similarity NPC476874
0.7589 Intermediate Similarity NPC473041
0.7581 Intermediate Similarity NPC45459
0.7581 Intermediate Similarity NPC315491
0.7581 Intermediate Similarity NPC249040
0.758 Intermediate Similarity NPC39679
0.7578 Intermediate Similarity NPC148183
0.7578 Intermediate Similarity NPC322064
0.7578 Intermediate Similarity NPC152768
0.7568 Intermediate Similarity NPC54744
0.756 Intermediate Similarity NPC321939
0.7556 Intermediate Similarity NPC313804
0.7556 Intermediate Similarity NPC315804
0.7545 Intermediate Similarity NPC162860
0.7543 Intermediate Similarity NPC473105
0.7533 Intermediate Similarity NPC220851
0.75 Intermediate Similarity NPC474192
0.75 Intermediate Similarity NPC475720
0.749 Intermediate Similarity NPC478012
0.7489 Intermediate Similarity NPC471080
0.7489 Intermediate Similarity NPC469592
0.7476 Intermediate Similarity NPC72980
0.7465 Intermediate Similarity NPC471944
0.7465 Intermediate Similarity NPC475506
0.7456 Intermediate Similarity NPC470501
0.7455 Intermediate Similarity NPC88008
0.7455 Intermediate Similarity NPC54420
0.7454 Intermediate Similarity NPC293917
0.7446 Intermediate Similarity NPC311906
0.7434 Intermediate Similarity NPC469594
0.7434 Intermediate Similarity NPC96321
0.7431 Intermediate Similarity NPC193761
0.7431 Intermediate Similarity NPC155143
0.7429 Intermediate Similarity NPC216369
0.7429 Intermediate Similarity NPC94752
0.7427 Intermediate Similarity NPC477630
0.7427 Intermediate Similarity NPC477635
0.7425 Intermediate Similarity NPC89987
0.7424 Intermediate Similarity NPC64216
0.7422 Intermediate Similarity NPC183407
0.7419 Intermediate Similarity NPC79129
0.7419 Intermediate Similarity NPC249150
0.7419 Intermediate Similarity NPC49196
0.7419 Intermediate Similarity NPC313985
0.7419 Intermediate Similarity NPC195461
0.7419 Intermediate Similarity NPC81654
0.7412 Intermediate Similarity NPC470502
0.7412 Intermediate Similarity NPC60621
0.7409 Intermediate Similarity NPC277350
0.7404 Intermediate Similarity NPC477549
0.7403 Intermediate Similarity NPC186351
0.7399 Intermediate Similarity NPC87413
0.7399 Intermediate Similarity NPC23294
0.7397 Intermediate Similarity NPC165599
0.7391 Intermediate Similarity NPC219336
0.7389 Intermediate Similarity NPC312645
0.7381 Intermediate Similarity NPC94943
0.738 Intermediate Similarity NPC478141
0.7378 Intermediate Similarity NPC477979
0.7378 Intermediate Similarity NPC50562
0.7376 Intermediate Similarity NPC53344
0.7371 Intermediate Similarity NPC471762
0.7364 Intermediate Similarity NPC470500
0.7364 Intermediate Similarity NPC473376
0.7361 Intermediate Similarity NPC262898
0.7361 Intermediate Similarity NPC156704
0.7358 Intermediate Similarity NPC213629
0.7358 Intermediate Similarity NPC175474
0.7357 Intermediate Similarity NPC264285
0.7356 Intermediate Similarity NPC91179
0.7356 Intermediate Similarity NPC469896
0.7354 Intermediate Similarity NPC303951
0.7354 Intermediate Similarity NPC5145
0.7354 Intermediate Similarity NPC471304
0.735 Intermediate Similarity NPC279189
0.735 Intermediate Similarity NPC200553
0.7348 Intermediate Similarity NPC470503
0.7348 Intermediate Similarity NPC51388
0.7345 Intermediate Similarity NPC3207
0.7345 Intermediate Similarity NPC67658
0.7343 Intermediate Similarity NPC183662
0.7343 Intermediate Similarity NPC15573
0.7343 Intermediate Similarity NPC217372
0.7342 Intermediate Similarity NPC474183
0.7339 Intermediate Similarity NPC213308
0.7336 Intermediate Similarity NPC99666
0.7336 Intermediate Similarity NPC55493
0.7333 Intermediate Similarity NPC190007
0.7333 Intermediate Similarity NPC477610
0.7327 Intermediate Similarity NPC473640
0.7327 Intermediate Similarity NPC52557
0.7327 Intermediate Similarity NPC50503
0.7317 Intermediate Similarity NPC475746
0.7315 Intermediate Similarity NPC179701
0.7309 Intermediate Similarity NPC223791
0.7309 Intermediate Similarity NPC476116
0.7309 Intermediate Similarity NPC107077
0.7308 Intermediate Similarity NPC474701
0.7303 Intermediate Similarity NPC469734
0.7301 Intermediate Similarity NPC118228
0.73 Intermediate Similarity NPC15801
0.7297 Intermediate Similarity NPC244741
0.7294 Intermediate Similarity NPC241024
0.7293 Intermediate Similarity NPC472099
0.729 Intermediate Similarity NPC473763
0.729 Intermediate Similarity NPC117244
0.7288 Intermediate Similarity NPC97902
0.7286 Intermediate Similarity NPC212535
0.7281 Intermediate Similarity NPC70956
0.7281 Intermediate Similarity NPC243834
0.728 Intermediate Similarity NPC242872
0.728 Intermediate Similarity NPC263117
0.728 Intermediate Similarity NPC125181
0.7277 Intermediate Similarity NPC196251
0.7277 Intermediate Similarity NPC63199
0.7277 Intermediate Similarity NPC111602
0.7277 Intermediate Similarity NPC102338
0.7265 Intermediate Similarity NPC86834
0.7265 Intermediate Similarity NPC210828
0.7265 Intermediate Similarity NPC475910
0.7261 Intermediate Similarity NPC81939
0.7261 Intermediate Similarity NPC474896
0.7257 Intermediate Similarity NPC162002
0.7257 Intermediate Similarity NPC151781
0.7257 Intermediate Similarity NPC316181
0.7257 Intermediate Similarity NPC89508
0.7257 Intermediate Similarity NPC74562
0.7248 Intermediate Similarity NPC102008
0.7248 Intermediate Similarity NPC171317
0.7243 Intermediate Similarity NPC329858
0.724 Intermediate Similarity NPC223427
0.7237 Intermediate Similarity NPC293151
0.7234 Intermediate Similarity NPC260434
0.7231 Intermediate Similarity NPC475666
0.723 Intermediate Similarity NPC46580
0.7229 Intermediate Similarity NPC31097
0.7229 Intermediate Similarity NPC16352
0.7229 Intermediate Similarity NPC280272

  Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC118559 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8498 Intermediate Similarity NPD8405 Clinical (unspecified phase)
0.8091 Intermediate Similarity NPD6824 Clinical (unspecified phase)
0.788 Intermediate Similarity NPD7470 Discontinued
0.7822 Intermediate Similarity NPD7603 Discontinued
0.7689 Intermediate Similarity NPD7948 Phase 1
0.7581 Intermediate Similarity NPD484 Approved
0.7577 Intermediate Similarity NPD7717 Approved
0.7577 Intermediate Similarity NPD7716 Approved
0.756 Intermediate Similarity NPD6141 Clinical (unspecified phase)
0.7523 Intermediate Similarity NPD5003 Discontinued
0.75 Intermediate Similarity NPD4885 Approved
0.7467 Intermediate Similarity NPD7823 Clinical (unspecified phase)
0.7456 Intermediate Similarity NPD8356 Approved
0.7454 Intermediate Similarity NPD7621 Clinical (unspecified phase)
0.7421 Intermediate Similarity NPD2916 Discontinued
0.7419 Intermediate Similarity NPD4601 Approved
0.7419 Intermediate Similarity NPD4600 Approved
0.7411 Intermediate Similarity NPD3243 Approved
0.7403 Intermediate Similarity NPD8430 Approved
0.7371 Intermediate Similarity NPD7710 Clinical (unspecified phase)
0.7357 Intermediate Similarity NPD5632 Approved
0.7349 Intermediate Similarity NPD7944 Discontinued
0.7347 Intermediate Similarity NPD8255 Phase 2
0.7342 Intermediate Similarity NPD6376 Discontinued
0.7336 Intermediate Similarity NPD8463 Approved
0.7331 Intermediate Similarity NPD7853 Phase 2
0.733 Intermediate Similarity NPD4862 Clinical (unspecified phase)
0.733 Intermediate Similarity NPD3003 Approved
0.7318 Intermediate Similarity NPD6176 Phase 1
0.7313 Intermediate Similarity NPD8406 Clinical (unspecified phase)
0.7311 Intermediate Similarity NPD8017 Clinical (unspecified phase)
0.7311 Intermediate Similarity NPD8016 Phase 3
0.7301 Intermediate Similarity NPD4897 Phase 2
0.7301 Intermediate Similarity NPD8112 Clinical (unspecified phase)
0.7299 Intermediate Similarity NPD6344 Clinical (unspecified phase)
0.7297 Intermediate Similarity NPD8322 Phase 2
0.7297 Intermediate Similarity NPD6838 Clinical (unspecified phase)
0.7289 Intermediate Similarity NPD8093 Discontinued
0.7281 Intermediate Similarity NPD7878 Phase 2
0.7269 Intermediate Similarity NPD5612 Discontinued
0.7265 Intermediate Similarity NPD7947 Clinical (unspecified phase)
0.7253 Intermediate Similarity NPD7268 Clinical (unspecified phase)
0.7252 Intermediate Similarity NPD7958 Clinical (unspecified phase)
0.7252 Intermediate Similarity NPD7957 Phase 1
0.7248 Intermediate Similarity NPD7778 Approved
0.7248 Intermediate Similarity NPD7777 Approved
0.7248 Intermediate Similarity NPD53 Approved
0.7244 Intermediate Similarity NPD8013 Clinical (unspecified phase)
0.7235 Intermediate Similarity NPD6449 Clinical (unspecified phase)
0.7235 Intermediate Similarity NPD5512 Phase 3
0.722 Intermediate Similarity NPD8493 Clinical (unspecified phase)
0.7212 Intermediate Similarity NPD7594 Clinical (unspecified phase)
0.7207 Intermediate Similarity NPD8272 Phase 2
0.7204 Intermediate Similarity NPD5728 Clinical (unspecified phase)
0.72 Intermediate Similarity NPD7998 Clinical (unspecified phase)
0.7194 Intermediate Similarity NPD8364 Approved
0.7194 Intermediate Similarity NPD8363 Approved
0.7191 Intermediate Similarity NPD7589 Clinical (unspecified phase)
0.7182 Intermediate Similarity NPD4500 Approved
0.7182 Intermediate Similarity NPD4501 Approved
0.7181 Intermediate Similarity NPD8460 Approved
0.7181 Intermediate Similarity NPD8459 Approved
0.7179 Intermediate Similarity NPD7994 Phase 2
0.7178 Intermediate Similarity NPD6517 Phase 3
0.7173 Intermediate Similarity NPD5040 Clinical (unspecified phase)
0.7167 Intermediate Similarity NPD2921 Clinical (unspecified phase)
0.7163 Intermediate Similarity NPD4499 Approved
0.7163 Intermediate Similarity NPD2564 Approved
0.7163 Intermediate Similarity NPD2565 Phase 2
0.7162 Intermediate Similarity NPD8072 Approved
0.715 Intermediate Similarity NPD2383 Phase 1
0.7149 Intermediate Similarity NPD7955 Approved
0.7149 Intermediate Similarity NPD7956 Approved
0.7143 Intermediate Similarity NPD7452 Approved
0.7143 Intermediate Similarity NPD5575 Clinical (unspecified phase)
0.7143 Intermediate Similarity NPD7453 Approved
0.7143 Intermediate Similarity NPD7222 Phase 2
0.7137 Intermediate Similarity NPD8365 Clinical (unspecified phase)
0.713 Intermediate Similarity NPD8115 Approved
0.713 Intermediate Similarity NPD8114 Approved
0.713 Intermediate Similarity NPD7712 Clinical (unspecified phase)
0.713 Intermediate Similarity NPD8109 Clinical (unspecified phase)
0.7124 Intermediate Similarity NPD4900 Clinical (unspecified phase)
0.7124 Intermediate Similarity NPD7547 Clinical (unspecified phase)
0.7124 Intermediate Similarity NPD7809 Clinical (unspecified phase)
0.7119 Intermediate Similarity NPD5483 Clinical (unspecified phase)
0.7112 Intermediate Similarity NPD5507 Approved
0.7112 Intermediate Similarity NPD5506 Approved
0.7111 Intermediate Similarity NPD5658 Approved
0.711 Intermediate Similarity NPD4418 Discontinued
0.7107 Intermediate Similarity NPD6716 Phase 1
0.7106 Intermediate Similarity NPD3259 Approved
0.7105 Intermediate Similarity NPD8094 Discontinued
0.7101 Intermediate Similarity NPD7951 Approved
0.7101 Intermediate Similarity NPD7953 Approved
0.7101 Intermediate Similarity NPD7790 Approved
0.7101 Intermediate Similarity NPD7952 Approved
0.7101 Intermediate Similarity NPD4373 Phase 2
0.7101 Intermediate Similarity NPD7950 Approved
0.7101 Intermediate Similarity NPD7791 Approved
0.7101 Intermediate Similarity NPD7789 Approved
0.71 Intermediate Similarity NPD7194 Discontinued
0.7097 Intermediate Similarity NPD6665 Discontinued
0.7093 Intermediate Similarity NPD8429 Approved
0.7093 Intermediate Similarity NPD8466 Approved
0.7093 Intermediate Similarity NPD8467 Approved
0.7093 Intermediate Similarity NPD8427 Approved
0.7093 Intermediate Similarity NPD8428 Approved
0.7093 Intermediate Similarity NPD8465 Approved
0.709 Intermediate Similarity NPD8359 Phase 2
0.7089 Intermediate Similarity NPD8106 Phase 2
0.7089 Intermediate Similarity NPD7688 Phase 1
0.7082 Intermediate Similarity NPD6160 Clinical (unspecified phase)
0.7074 Intermediate Similarity NPD5417 Clinical (unspecified phase)
0.7074 Intermediate Similarity NPD5902 Approved
0.7074 Intermediate Similarity NPD5903 Approved
0.7072 Intermediate Similarity NPD7727 Phase 2
0.7072 Intermediate Similarity NPD7903 Clinical (unspecified phase)
0.7072 Intermediate Similarity NPD4511 Phase 1
0.7072 Intermediate Similarity NPD7817 Phase 1
0.707 Intermediate Similarity NPD4948 Discontinued
0.7061 Intermediate Similarity NPD8358 Approved
0.7059 Intermediate Similarity NPD7797 Approved
0.7059 Intermediate Similarity NPD2175 Phase 3
0.7059 Intermediate Similarity NPD2177 Approved
0.7059 Intermediate Similarity NPD7796 Approved
0.7059 Intermediate Similarity NPD1768 Approved
0.7059 Intermediate Similarity NPD3814 Phase 1
0.7059 Intermediate Similarity NPD2176 Approved
0.7054 Intermediate Similarity NPD5901 Discontinued
0.7054 Intermediate Similarity NPD3946 Clinical (unspecified phase)
0.7053 Intermediate Similarity NPD2844 Phase 3
0.7052 Intermediate Similarity NPD7708 Approved
0.7046 Intermediate Similarity NPD4952 Phase 3
0.7042 Intermediate Similarity NPD2092 Phase 2
0.7042 Intermediate Similarity NPD5596 Phase 2
0.7042 Intermediate Similarity NPD2095 Phase 2
0.7042 Intermediate Similarity NPD2094 Phase 2
0.704 Intermediate Similarity NPD8073 Approved
0.7037 Intermediate Similarity NPD6965 Clinical (unspecified phase)
0.7034 Intermediate Similarity NPD7731 Approved
0.7034 Intermediate Similarity NPD7730 Approved
0.7032 Intermediate Similarity NPD3324 Clinical (unspecified phase)
0.7029 Intermediate Similarity NPD7558 Phase 2
0.7028 Intermediate Similarity NPD8246 Approved
0.7028 Intermediate Similarity NPD6452 Discontinued
0.7028 Intermediate Similarity NPD8247 Approved
0.7026 Intermediate Similarity NPD6770 Approved
0.7022 Intermediate Similarity NPD8403 Phase 1
0.7022 Intermediate Similarity NPD7001 Phase 3
0.7022 Intermediate Similarity NPD4901 Clinical (unspecified phase)
0.7019 Intermediate Similarity NPD1326 Approved
0.7019 Intermediate Similarity NPD1325 Approved
0.7017 Intermediate Similarity NPD7284 Clinical (unspecified phase)
0.7014 Intermediate Similarity NPD7946 Pre-registration
0.7014 Intermediate Similarity NPD7889 Clinical (unspecified phase)
0.7009 Intermediate Similarity NPD2096 Phase 2
0.7009 Intermediate Similarity NPD2091 Phase 2
0.7008 Intermediate Similarity NPD7803 Approved
0.7004 Intermediate Similarity NPD4520 Approved
0.7004 Intermediate Similarity NPD7781 Approved
0.7004 Intermediate Similarity NPD5482 Discontinued
0.7004 Intermediate Similarity NPD7780 Approved
0.7004 Intermediate Similarity NPD5559 Phase 2
0.7 Intermediate Similarity NPD7971 Clinical (unspecified phase)
0.7 Intermediate Similarity NPD482 Approved
0.7 Intermediate Similarity NPD7970 Approved
0.6992 Remote Similarity NPD8289 Discontinued
0.6992 Remote Similarity NPD3263 Phase 3
0.6992 Remote Similarity NPD7426 Phase 1
0.6992 Remote Similarity NPD7711 Discontinued
0.6991 Remote Similarity NPD6290 Phase 2
0.6987 Remote Similarity NPD6657 Clinical (unspecified phase)
0.6985 Remote Similarity NPD8425 Approved
0.6985 Remote Similarity NPD8426 Approved
0.6982 Remote Similarity NPD8395 Approved
0.6982 Remote Similarity NPD6248 Phase 2
0.6982 Remote Similarity NPD4118 Clinical (unspecified phase)
0.6982 Remote Similarity NPD6249 Phase 2
0.6982 Remote Similarity NPD8396 Approved
0.6978 Remote Similarity NPD8098 Approved
0.6975 Remote Similarity NPD7824 Approved
0.6973 Remote Similarity NPD7181 Phase 3
0.6967 Remote Similarity NPD749 Clinical (unspecified phase)
0.6966 Remote Similarity NPD7726 Phase 1
0.6962 Remote Similarity NPD4086 Phase 1
0.696 Remote Similarity NPD2509 Approved
0.696 Remote Similarity NPD2510 Approved
0.6959 Remote Similarity NPD4334 Discontinued
0.6955 Remote Similarity NPD7619 Phase 3
0.6955 Remote Similarity NPD7618 Phase 3
0.6949 Remote Similarity NPD7271 Approved
0.6948 Remote Similarity NPD5445 Approved
0.6943 Remote Similarity NPD5936 Approved
0.6943 Remote Similarity NPD5939 Approved
0.6943 Remote Similarity NPD4502 Phase 2
0.6943 Remote Similarity NPD5416 Discontinued
0.694 Remote Similarity NPD5164 Discontinued
0.6933 Remote Similarity NPD2121 Clinical (unspecified phase)
0.6933 Remote Similarity NPD6991 Approved

  Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data