Structure

Physi-Chem Properties

Molecular Weight:  284.21
Volume:  327.051
LogP:  5.934
LogD:  4.771
LogS:  -5.909
# Rotatable Bonds:  1
TPSA:  20.23
# H-Bond Aceptor:  1
# H-Bond Donor:  1
# Rings:  3
# Heavy Atoms:  1

MedChem Properties

QED Drug-Likeness Score:  0.709
Synthetic Accessibility Score:  3.789
Fsp3:  0.6
Lipinski Rule-of-5:  Accepted
Pfizer Rule:  Rejected
GSK Rule:  Rejected
BMS Rule:  0
Golden Triangle Rule:  Accepted
Chelating Alert:  0
PAINS Alert:  0

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

Caco-2 Permeability:  -4.994
MDCK Permeability:  1.6616664652246982e-05
Pgp-inhibitor:  0.993
Pgp-substrate:  0.003
Human Intestinal Absorption (HIA):  0.009
20% Bioavailability (F20%):  0.891
30% Bioavailability (F30%):  0.988

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):  0.097
Plasma Protein Binding (PPB):  98.30628204345703%
Volume Distribution (VD):  4.413
Pgp-substrate:  2.664381742477417%

ADMET: Metabolism

CYP1A2-inhibitor:  0.589
CYP1A2-substrate:  0.764
CYP2C19-inhibitor:  0.582
CYP2C19-substrate:  0.882
CYP2C9-inhibitor:  0.365
CYP2C9-substrate:  0.872
CYP2D6-inhibitor:  0.796
CYP2D6-substrate:  0.807
CYP3A4-inhibitor:  0.753
CYP3A4-substrate:  0.613

ADMET: Excretion

Clearance (CL):  10.089
Half-life (T1/2):  0.072

ADMET: Toxicity

hERG Blockers:  0.524
Human Hepatotoxicity (H-HT):  0.215
Drug-inuced Liver Injury (DILI):  0.09
AMES Toxicity:  0.028
Rat Oral Acute Toxicity:  0.477
Maximum Recommended Daily Dose:  0.951
Skin Sensitization:  0.918
Carcinogencity:  0.474
Eye Corrosion:  0.014
Eye Irritation:  0.903
Respiratory Toxicity:  0.961

Download Data

Data Type Select
General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs  

  Natural Product: NPC250323

Natural Product ID:  NPC250323
Common Name*:   6,7-Dehydroferruginol
IUPAC Name:   (4bS,8aS)-4b,8,8-trimethyl-2-propan-2-yl-5,6,7,8a-tetrahydrophenanthren-3-ol
Synonyms:  
Standard InCHIKey:  NCHINJPZLGMLCY-AZUAARDMSA-N
Standard InCHI:  InChI=1S/C20H28O/c1-13(2)15-11-14-7-8-18-19(3,4)9-6-10-20(18,5)16(14)12-17(15)21/h7-8,11-13,18,21H,6,9-10H2,1-5H3/t18-,20+/m0/s1
SMILES:  CC(c1cc2C=C[C@@H]3[C@](c2cc1O)(C)CCCC3(C)C)C
Synthetic Gene Cluster:   n.a.
ChEMBL Identifier:   CHEMBL3093126
PubChem CID:   10978982
Chemical Classification**:  
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0000012] Lipids and lipid-like molecules
      • [CHEMONTID:0000259] Prenol lipids
        • [CHEMONTID:0001551] Diterpenoids

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO25701 Amentotaxus yunnanensis Species Taxaceae Eukaryota n.a. n.a. n.a. PMID[12880325]
NPO25779 Vicia sativa Species Fabaceae Eukaryota n.a. n.a. n.a. PMID[1567426]
NPO25813 Salvia przewalskii Species Lamiaceae Eukaryota n.a. whole plant n.a. PMID[17217287]
NPO13135 Campylotropis hirtella Species Fabaceae Eukaryota n.a. n.a. n.a. PMID[19481938]
NPO11100 Artemisia capillaris Species Asteraceae Eukaryota n.a. whole plant n.a. PMID[21428416]
NPO17318 Streptomyces cyaneus Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21462031]
NPO11100 Artemisia capillaris Species Asteraceae Eukaryota n.a. n.a. n.a. PMID[22870812]
NPO11100 Artemisia capillaris Species Asteraceae Eukaryota n.a. n.a. n.a. PMID[23435948]
NPO18892 Salvinia molesta Species Salviniaceae Eukaryota whole plants east Texas, USA 2009-2011 PMID[24210499]
NPO18892 Salvinia molesta Species Salviniaceae Eukaryota n.a. n.a. n.a. PMID[24210499]
NPO10219 Juniperus communis Species Cupressaceae Eukaryota n.a. n.a. n.a. PMID[24913660]
NPO11100 Artemisia capillaris Species Asteraceae Eukaryota n.a. n.a. n.a. PMID[25737008]
NPO12796 Periploca sepium Species Apocynaceae Eukaryota n.a. n.a. n.a. PMID[28294615]
NPO865 Dendrobium loddigesii Species Orchidaceae Eukaryota n.a. n.a. n.a. PMID[31291099]
NPO10219 Juniperus communis Species Cupressaceae Eukaryota n.a. n.a. Database[FooDB]
NPO25813 Salvia przewalskii Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO25701 Amentotaxus yunnanensis Species Taxaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO865 Dendrobium loddigesii Species Orchidaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO13135 Campylotropis hirtella Species Fabaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO6731 Ononis spinosa Species Fabaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO11100 Artemisia capillaris Species Asteraceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO24390 Juniperus rigida Species Cupressaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO12796 Periploca sepium Species Apocynaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO25779 Vicia sativa Species Fabaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO10219 Juniperus communis Species Cupressaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO15612 Glaucium oxylobum Species Papaveraceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO7773 Crinum moorei Species Amaryllidaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO24740 Uvaria klaineana Species Annonaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO25813 Salvia przewalskii Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO10219 Juniperus communis Species Cupressaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO13135 Campylotropis hirtella Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO25779 Vicia sativa Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO11100 Artemisia capillaris Species Asteraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO6731 Ononis spinosa Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO7773 Crinum moorei Species Amaryllidaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO28257 Dioscorea communis Species Dioscoreaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO15612 Glaucium oxylobum Species Papaveraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO12796 Periploca sepium Species Apocynaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO25701 Amentotaxus yunnanensis Species Taxaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO2267 Liatris tenuifolia Species Asteraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO865 Dendrobium loddigesii Species Orchidaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO24390 Juniperus rigida Species Cupressaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO24390 Juniperus rigida Species Cupressaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO865 Dendrobium loddigesii Species Orchidaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO6731 Ononis spinosa Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO12796 Periploca sepium Species Apocynaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO25779 Vicia sativa Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO10219 Juniperus communis Species Cupressaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO11100 Artemisia capillaris Species Asteraceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO15612 Glaucium oxylobum Species Papaveraceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO2267 Liatris tenuifolia Species Asteraceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO865 Dendrobium loddigesii Species Orchidaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO12796 Periploca sepium Species Apocynaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO11100 Artemisia capillaris Species Asteraceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO5456 Juniperus drupacea Species Cupressaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13361 Clerodendrum tomentosum Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25974 Streptomyces lateritius Species Streptomycetaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO6731 Ononis spinosa Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24740 Uvaria klaineana Species Annonaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO415 Deguelia hatschbachii Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18892 Salvinia molesta Species Salviniaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12205 Eucalyptus apodophylla Species Myrtaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8215 Crepis zacintha Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO7773 Crinum moorei Species Amaryllidaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24988 Viburnum sieboldi Species Adoxaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11576 Glycosmis macrophylla Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO14653 Haliotis diversicolor Species Haliotidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO22691 Mentha cardiaca Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17158 Trichocereus bridgesii Species Cactaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO10922 Pentaclethra macrophylla Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15612 Glaucium oxylobum Species Papaveraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO1815 Breonia chinensis Species Rubiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO1257 Distephanus angulifolius Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO28257 Dioscorea communis Species Dioscoreaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17318 Streptomyces cyaneus Species Streptomycetaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO10605 Tristania conferta Species Myrtaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO23960 Artemisia siversiana Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9704 Sonneratia caseolaris Species Lythraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25868 Decachaeta ovatifolia n.a. n.a. n.a. n.a. n.a. n.a. Database[UNPD]
NPO25701 Amentotaxus yunnanensis Species Taxaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25779 Vicia sativa Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24390 Juniperus rigida Species Cupressaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO23384 Rhodiola semenovii Species Crassulaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO10219 Juniperus communis Species Cupressaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26223 Cladonia bellidiflora Species Cladoniaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26087 Euphorbia retusa Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12476 Delphinium cyphoplectrum Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO7646 Edgeworthia chrysantha Species Thymelaeaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO5043 Eria japonica Species Orchidaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO865 Dendrobium loddigesii Species Orchidaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12796 Periploca sepium Species Apocynaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25813 Salvia przewalskii Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO2267 Liatris tenuifolia Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO23417 Rhabdia lycioides n.a. n.a. n.a. n.a. n.a. n.a. Database[UNPD]
NPO9319 Pterocaulon virgatum Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO10497 Hydrolithon reinboldii Species Corallinaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO4009 Allochromatium minutissimum Species Chromatiaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO27437 Camptothecium lutescens Species Brachytheciaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO10638 Plectranthus myrianthus Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21720 Talaromyces variabilis Species Trichocomaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17251 Aniba firmula Species Lauraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO5124 Aconitum ibukiense Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8934 Gypsophila perfoliata Species Caryophyllaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO3873 Crotalaria candicans Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO7822.1 Eucalyptus globulus subsp. bicostata Subspecies Myrtaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO22016 0tholaena dealbata Species Pteridaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25212 Ritterella rubra n.a. n.a. n.a. n.a. n.a. n.a. Database[UNPD]
NPO6346 Phallusia fumigata Species Ascidiidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO14339 Fevillea trilobata Species Cucurbitaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9532 Vernonia cistifolia Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO10155 Stauntonia obovatifoliola Species Lardizabalaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11843 Stephania zippeliana Species Menispermaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11100 Artemisia capillaris Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26054 Palmaria palmata Species Palmariaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO3705 Anacardium humile Species Anacardiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12565 Hypericum polyanthemum Species Hypericaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12091 Martensia denticulata Species Delesseriaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13135 Campylotropis hirtella Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25141 Mycetinis alliaceus Species Omphalotaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12311 Graphis handelii Species Graphidaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26316 Pleurophycus gardneri Species Alariaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11190 Veronica polita Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO526 Salvia sessei Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO6289 Ceropegia dichotoma Species Apocynaceae Eukaryota n.a. n.a. n.a. Database[UNPD]

☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  NP Quantity Composition/Concentration

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference

☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT171 Cell Line MRC5 Homo sapiens GI50 = 59250.0 nM PMID[527970]
NPT116 Cell Line HL-60 Homo sapiens GI50 = 66520.0 nM PMID[527970]
NPT306 Cell Line PC-3 Homo sapiens GI50 = 58120.0 nM PMID[527970]
NPT81 Cell Line A549 Homo sapiens GI50 = 53790.0 nM PMID[527970]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. GI50 = 37500.0 nM PMID[527970]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. GI50 = 46710.0 nM PMID[527970]

☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

  Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC250323 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9808 High Similarity NPC13482
0.9714 High Similarity NPC176279
0.9714 High Similarity NPC260323
0.9626 High Similarity NPC195922
0.9619 High Similarity NPC141782
0.9541 High Similarity NPC477136
0.9519 High Similarity NPC151477
0.945 High Similarity NPC471668
0.9423 High Similarity NPC21594
0.9358 High Similarity NPC35797
0.9358 High Similarity NPC192948
0.9352 High Similarity NPC715
0.934 High Similarity NPC58865
0.9327 High Similarity NPC117115
0.9273 High Similarity NPC477137
0.9273 High Similarity NPC219112
0.9273 High Similarity NPC308311
0.9273 High Similarity NPC38893
0.9266 High Similarity NPC268160
0.9259 High Similarity NPC46940
0.9204 High Similarity NPC32322
0.9204 High Similarity NPC259703
0.9196 High Similarity NPC93071
0.9189 High Similarity NPC304510
0.9189 High Similarity NPC172219
0.9182 High Similarity NPC147179
0.9167 High Similarity NPC95716
0.9167 High Similarity NPC266937
0.9167 High Similarity NPC470770
0.9167 High Similarity NPC322753
0.9107 High Similarity NPC471671
0.9107 High Similarity NPC154030
0.9099 High Similarity NPC469663
0.9099 High Similarity NPC92
0.9099 High Similarity NPC308828
0.9083 High Similarity NPC177962
0.9083 High Similarity NPC62867
0.9065 High Similarity NPC11554
0.9027 High Similarity NPC126002
0.9027 High Similarity NPC469644
0.9018 High Similarity NPC16030
0.9009 High Similarity NPC469719
0.8991 High Similarity NPC151537
0.8991 High Similarity NPC77772
0.8981 High Similarity NPC314187
0.8957 High Similarity NPC154696
0.8942 High Similarity NPC211885
0.8942 High Similarity NPC225506
0.8938 High Similarity NPC469609
0.8909 High Similarity NPC228425
0.8899 High Similarity NPC296683
0.8899 High Similarity NPC132720
0.8879 High Similarity NPC271274
0.887 High Similarity NPC241001
0.8868 High Similarity NPC238696
0.8857 High Similarity NPC252105
0.8846 High Similarity NPC122005
0.8846 High Similarity NPC252821
0.8846 High Similarity NPC33675
0.8846 High Similarity NPC299762
0.8829 High Similarity NPC322239
0.8796 High Similarity NPC320439
0.8793 High Similarity NPC249340
0.8793 High Similarity NPC162935
0.8783 High Similarity NPC135467
0.8783 High Similarity NPC260832
0.8761 High Similarity NPC312105
0.8761 High Similarity NPC141001
0.875 High Similarity NPC77492
0.875 High Similarity NPC6597
0.875 High Similarity NPC79241
0.875 High Similarity NPC471534
0.8739 High Similarity NPC471179
0.8718 High Similarity NPC121168
0.8718 High Similarity NPC11250
0.8718 High Similarity NPC176208
0.8718 High Similarity NPC152946
0.8696 High Similarity NPC151197
0.8684 High Similarity NPC299180
0.8661 High Similarity NPC317869
0.8655 High Similarity NPC76119
0.8655 High Similarity NPC4286
0.8654 High Similarity NPC312132
0.8654 High Similarity NPC259512
0.8644 High Similarity NPC471187
0.8632 High Similarity NPC253627
0.8611 High Similarity NPC138942
0.8611 High Similarity NPC47284
0.8609 High Similarity NPC48342
0.8609 High Similarity NPC164649
0.8609 High Similarity NPC206
0.8598 High Similarity NPC168829
0.8596 High Similarity NPC137496
0.8596 High Similarity NPC474387
0.8596 High Similarity NPC154511
0.8596 High Similarity NPC257540
0.8596 High Similarity NPC247858
0.8596 High Similarity NPC474358
0.8585 High Similarity NPC72729
0.8584 High Similarity NPC107240
0.8571 High Similarity NPC225464
0.8571 High Similarity NPC181334
0.8559 High Similarity NPC471794
0.8559 High Similarity NPC478058
0.8559 High Similarity NPC297057
0.8558 High Similarity NPC144682
0.8558 High Similarity NPC8392
0.8558 High Similarity NPC222146
0.8547 High Similarity NPC328504
0.8545 High Similarity NPC64586
0.8534 High Similarity NPC42657
0.8532 High Similarity NPC53740
0.8532 High Similarity NPC155072
0.8519 High Similarity NPC288411
0.8519 High Similarity NPC272029
0.8512 High Similarity NPC72667
0.8509 High Similarity NPC84999
0.8509 High Similarity NPC246760
0.8505 High Similarity NPC51015
0.85 High Similarity NPC137750
0.85 High Similarity NPC124030
0.8496 Intermediate Similarity NPC117846
0.8496 Intermediate Similarity NPC321589
0.8496 Intermediate Similarity NPC263753
0.8491 Intermediate Similarity NPC92730
0.8487 Intermediate Similarity NPC198014
0.8482 Intermediate Similarity NPC469912
0.8462 Intermediate Similarity NPC325544
0.8462 Intermediate Similarity NPC99734
0.8462 Intermediate Similarity NPC478121
0.8462 Intermediate Similarity NPC27323
0.8462 Intermediate Similarity NPC318581
0.8462 Intermediate Similarity NPC245187
0.8462 Intermediate Similarity NPC318552
0.8462 Intermediate Similarity NPC477037
0.8462 Intermediate Similarity NPC316301
0.8462 Intermediate Similarity NPC289769
0.8462 Intermediate Similarity NPC152415
0.8462 Intermediate Similarity NPC190501
0.8455 Intermediate Similarity NPC472980
0.844 Intermediate Similarity NPC99557
0.844 Intermediate Similarity NPC219286
0.844 Intermediate Similarity NPC243601
0.843 Intermediate Similarity NPC100414
0.843 Intermediate Similarity NPC43000
0.843 Intermediate Similarity NPC254492
0.843 Intermediate Similarity NPC325294
0.843 Intermediate Similarity NPC321822
0.843 Intermediate Similarity NPC71610
0.8426 Intermediate Similarity NPC269212
0.8421 Intermediate Similarity NPC249270
0.8417 Intermediate Similarity NPC199273
0.8407 Intermediate Similarity NPC302371
0.8396 Intermediate Similarity NPC32674
0.8396 Intermediate Similarity NPC156313
0.8393 Intermediate Similarity NPC224870
0.839 Intermediate Similarity NPC129176
0.8376 Intermediate Similarity NPC176893
0.8374 Intermediate Similarity NPC171460
0.8374 Intermediate Similarity NPC276238
0.8365 Intermediate Similarity NPC55903
0.8364 Intermediate Similarity NPC54765
0.8364 Intermediate Similarity NPC310456
0.8361 Intermediate Similarity NPC84672
0.8361 Intermediate Similarity NPC108164
0.8361 Intermediate Similarity NPC69424
0.8361 Intermediate Similarity NPC176130
0.8361 Intermediate Similarity NPC78364
0.8361 Intermediate Similarity NPC471077
0.8349 Intermediate Similarity NPC475225
0.8347 Intermediate Similarity NPC87985
0.8319 Intermediate Similarity NPC476632
0.8319 Intermediate Similarity NPC165770
0.8319 Intermediate Similarity NPC470723
0.8319 Intermediate Similarity NPC225679
0.8319 Intermediate Similarity NPC142198
0.8319 Intermediate Similarity NPC224527
0.8319 Intermediate Similarity NPC474115
0.8319 Intermediate Similarity NPC4493
0.8319 Intermediate Similarity NPC77569
0.8305 Intermediate Similarity NPC68339
0.8305 Intermediate Similarity NPC103916
0.8304 Intermediate Similarity NPC186385
0.8304 Intermediate Similarity NPC299568
0.8302 Intermediate Similarity NPC216520
0.8302 Intermediate Similarity NPC292730
0.8302 Intermediate Similarity NPC132271
0.8302 Intermediate Similarity NPC473388
0.8302 Intermediate Similarity NPC82664
0.8293 Intermediate Similarity NPC96024
0.8288 Intermediate Similarity NPC472979
0.8288 Intermediate Similarity NPC27252
0.8286 Intermediate Similarity NPC76938
0.8276 Intermediate Similarity NPC261973
0.8269 Intermediate Similarity NPC231150
0.8269 Intermediate Similarity NPC155908
0.8269 Intermediate Similarity NPC304541
0.8269 Intermediate Similarity NPC306074
0.8269 Intermediate Similarity NPC204210
0.8257 Intermediate Similarity NPC235762

  Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC250323 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8796 High Similarity NPD2342 Discontinued
0.8739 High Similarity NPD7635 Approved
0.8654 High Similarity NPD288 Approved
0.8621 High Similarity NPD2932 Approved
0.8609 High Similarity NPD3091 Approved
0.8558 High Similarity NPD844 Approved
0.8558 High Similarity NPD1809 Phase 2
0.8491 Intermediate Similarity NPD3020 Approved
0.8462 Intermediate Similarity NPD3019 Approved
0.8462 Intermediate Similarity NPD1432 Clinical (unspecified phase)
0.8462 Intermediate Similarity NPD4059 Approved
0.8365 Intermediate Similarity NPD845 Approved
0.8319 Intermediate Similarity NPD3092 Approved
0.8304 Intermediate Similarity NPD4750 Phase 3
0.8241 Intermediate Similarity NPD289 Clinical (unspecified phase)
0.8208 Intermediate Similarity NPD2860 Approved
0.8208 Intermediate Similarity NPD2859 Approved
0.8151 Intermediate Similarity NPD3095 Discontinued
0.8151 Intermediate Similarity NPD1751 Approved
0.8142 Intermediate Similarity NPD3021 Approved
0.8142 Intermediate Similarity NPD3022 Approved
0.8113 Intermediate Similarity NPD2934 Approved
0.8113 Intermediate Similarity NPD2933 Approved
0.8067 Intermediate Similarity NPD4093 Discontinued
0.8049 Intermediate Similarity NPD3094 Phase 2
0.8033 Intermediate Similarity NPD3600 Clinical (unspecified phase)
0.8 Intermediate Similarity NPD2286 Discontinued
0.792 Intermediate Similarity NPD3635 Approved
0.792 Intermediate Similarity NPD5736 Approved
0.792 Intermediate Similarity NPD3636 Approved
0.792 Intermediate Similarity NPD3637 Approved
0.7907 Intermediate Similarity NPD4097 Suspended
0.7857 Intermediate Similarity NPD2605 Approved
0.7857 Intermediate Similarity NPD2606 Approved
0.7851 Intermediate Similarity NPD4589 Approved
0.7851 Intermediate Similarity NPD4626 Approved
0.784 Intermediate Similarity NPD2194 Approved
0.784 Intermediate Similarity NPD2195 Approved
0.7826 Intermediate Similarity NPD1792 Phase 2
0.7815 Intermediate Similarity NPD7325 Clinical (unspecified phase)
0.7795 Intermediate Similarity NPD5155 Approved
0.7795 Intermediate Similarity NPD5156 Approved
0.7787 Intermediate Similarity NPD3023 Approved
0.7787 Intermediate Similarity NPD3026 Approved
0.7769 Intermediate Similarity NPD3025 Approved
0.7769 Intermediate Similarity NPD3024 Approved
0.7717 Intermediate Similarity NPD3595 Approved
0.7717 Intermediate Similarity NPD3594 Approved
0.7698 Intermediate Similarity NPD4624 Approved
0.7692 Intermediate Similarity NPD6124 Clinical (unspecified phase)
0.7686 Intermediate Similarity NPD5304 Approved
0.7686 Intermediate Similarity NPD5303 Approved
0.7679 Intermediate Similarity NPD940 Approved
0.7679 Intermediate Similarity NPD846 Approved
0.7674 Intermediate Similarity NPD6663 Approved
0.7656 Intermediate Similarity NPD4625 Phase 3
0.7647 Intermediate Similarity NPD497 Approved
0.7611 Intermediate Similarity NPD5700 Clinical (unspecified phase)
0.7596 Intermediate Similarity NPD111 Approved
0.7565 Intermediate Similarity NPD1445 Approved
0.7565 Intermediate Similarity NPD1444 Approved
0.7563 Intermediate Similarity NPD495 Approved
0.7563 Intermediate Similarity NPD496 Approved
0.7563 Intermediate Similarity NPD2234 Approved
0.7563 Intermediate Similarity NPD2229 Approved
0.7563 Intermediate Similarity NPD498 Approved
0.7563 Intermediate Similarity NPD7159 Clinical (unspecified phase)
0.7563 Intermediate Similarity NPD2228 Approved
0.7559 Intermediate Similarity NPD6917 Clinical (unspecified phase)
0.7541 Intermediate Similarity NPD2226 Clinical (unspecified phase)
0.754 Intermediate Similarity NPD6696 Suspended
0.7481 Intermediate Similarity NPD4060 Phase 1
0.7481 Intermediate Similarity NPD3620 Phase 2
0.7481 Intermediate Similarity NPD3619 Clinical (unspecified phase)
0.748 Intermediate Similarity NPD5691 Approved
0.7462 Intermediate Similarity NPD6410 Clinical (unspecified phase)
0.746 Intermediate Similarity NPD4749 Approved
0.746 Intermediate Similarity NPD5327 Phase 3
0.744 Intermediate Similarity NPD5351 Clinical (unspecified phase)
0.744 Intermediate Similarity NPD5350 Clinical (unspecified phase)
0.744 Intermediate Similarity NPD1201 Approved
0.7434 Intermediate Similarity NPD1242 Phase 1
0.7417 Intermediate Similarity NPD4869 Clinical (unspecified phase)
0.7402 Intermediate Similarity NPD1283 Approved
0.7388 Intermediate Similarity NPD7742 Approved
0.7388 Intermediate Similarity NPD7743 Approved
0.7377 Intermediate Similarity NPD7340 Approved
0.7348 Intermediate Similarity NPD4140 Approved
0.7344 Intermediate Similarity NPD4339 Clinical (unspecified phase)
0.7339 Intermediate Similarity NPD1651 Approved
0.7295 Intermediate Similarity NPD6671 Approved
0.7293 Intermediate Similarity NPD5735 Approved
0.7279 Intermediate Similarity NPD4725 Approved
0.7279 Intermediate Similarity NPD4726 Approved
0.7279 Intermediate Similarity NPD4721 Approved
0.7273 Intermediate Similarity NPD1398 Phase 1
0.7259 Intermediate Similarity NPD3299 Clinical (unspecified phase)
0.7258 Intermediate Similarity NPD7330 Discontinued
0.7246 Intermediate Similarity NPD7003 Approved
0.7239 Intermediate Similarity NPD6353 Approved
0.7231 Intermediate Similarity NPD2861 Phase 2
0.7213 Intermediate Similarity NPD1791 Approved
0.7213 Intermediate Similarity NPD1793 Approved
0.7209 Intermediate Similarity NPD1470 Approved
0.7206 Intermediate Similarity NPD5406 Approved
0.7206 Intermediate Similarity NPD5408 Approved
0.7206 Intermediate Similarity NPD5405 Approved
0.7206 Intermediate Similarity NPD5404 Approved
0.72 Intermediate Similarity NPD4235 Clinical (unspecified phase)
0.72 Intermediate Similarity NPD4196 Clinical (unspecified phase)
0.7197 Intermediate Similarity NPD4907 Clinical (unspecified phase)
0.7185 Intermediate Similarity NPD7718 Clinical (unspecified phase)
0.7174 Intermediate Similarity NPD3638 Discontinued
0.7165 Intermediate Similarity NPD1281 Approved
0.7155 Intermediate Similarity NPD9500 Approved
0.7132 Intermediate Similarity NPD1509 Clinical (unspecified phase)
0.7131 Intermediate Similarity NPD5283 Phase 1
0.713 Intermediate Similarity NPD3028 Approved
0.7122 Intermediate Similarity NPD8166 Discontinued
0.7109 Intermediate Similarity NPD2230 Approved
0.7109 Intermediate Similarity NPD2233 Approved
0.7109 Intermediate Similarity NPD2232 Approved
0.7097 Intermediate Similarity NPD7636 Approved
0.7097 Intermediate Similarity NPD405 Clinical (unspecified phase)
0.7087 Intermediate Similarity NPD3143 Discontinued
0.7087 Intermediate Similarity NPD2688 Clinical (unspecified phase)
0.708 Intermediate Similarity NPD6100 Approved
0.708 Intermediate Similarity NPD6099 Approved
0.7073 Intermediate Similarity NPD5951 Approved
0.7071 Intermediate Similarity NPD7910 Clinical (unspecified phase)
0.7054 Intermediate Similarity NPD1669 Approved
0.705 Intermediate Similarity NPD5698 Clinical (unspecified phase)
0.7045 Intermediate Similarity NPD4908 Phase 1
0.7031 Intermediate Similarity NPD1611 Approved
0.7031 Intermediate Similarity NPD1610 Phase 2
0.7016 Intermediate Similarity NPD709 Approved
0.7015 Intermediate Similarity NPD8032 Phase 2
0.7008 Intermediate Similarity NPD5238 Clinical (unspecified phase)
0.7 Intermediate Similarity NPD8651 Approved
0.6978 Remote Similarity NPD4257 Approved
0.6978 Remote Similarity NPD4256 Phase 2
0.6977 Remote Similarity NPD3070 Discontinued
0.6972 Remote Similarity NPD2420 Approved
0.6972 Remote Similarity NPD7040 Clinical (unspecified phase)
0.6972 Remote Similarity NPD7041 Phase 2
0.6972 Remote Similarity NPD2421 Approved
0.6972 Remote Similarity NPD7390 Discontinued
0.6967 Remote Similarity NPD228 Approved
0.6963 Remote Similarity NPD3110 Approved
0.6963 Remote Similarity NPD3109 Approved
0.6953 Remote Similarity NPD1981 Approved
0.6953 Remote Similarity NPD1983 Approved
0.6953 Remote Similarity NPD1980 Approved
0.6949 Remote Similarity NPD9608 Approved
0.6949 Remote Similarity NPD9610 Approved
0.694 Remote Similarity NPD2028 Clinical (unspecified phase)
0.694 Remote Similarity NPD6812 Clinical (unspecified phase)
0.6935 Remote Similarity NPD1476 Clinical (unspecified phase)
0.6929 Remote Similarity NPD2209 Approved
0.6929 Remote Similarity NPD2211 Approved
0.6923 Remote Similarity NPD4160 Clinical (unspecified phase)
0.6923 Remote Similarity NPD7422 Clinical (unspecified phase)
0.6894 Remote Similarity NPD6584 Phase 3
0.688 Remote Similarity NPD7157 Approved
0.6879 Remote Similarity NPD6398 Clinical (unspecified phase)
0.6875 Remote Similarity NPD7163 Clinical (unspecified phase)
0.6875 Remote Similarity NPD2667 Approved
0.6875 Remote Similarity NPD2668 Approved
0.6866 Remote Similarity NPD7095 Approved
0.6861 Remote Similarity NPD4579 Clinical (unspecified phase)
0.6861 Remote Similarity NPD2157 Approved
0.6857 Remote Similarity NPD7037 Approved
0.6842 Remote Similarity NPD4208 Discontinued
0.6838 Remote Similarity NPD6346 Approved
0.6838 Remote Similarity NPD2979 Phase 3
0.6818 Remote Similarity NPD1164 Approved
0.6806 Remote Similarity NPD3645 Discontinued
0.6803 Remote Similarity NPD5451 Approved
0.6794 Remote Similarity NPD4659 Approved
0.6794 Remote Similarity NPD1755 Approved
0.6788 Remote Similarity NPD3657 Discovery
0.6786 Remote Similarity NPD2029 Clinical (unspecified phase)
0.6783 Remote Similarity NPD3300 Phase 2
0.6774 Remote Similarity NPD9379 Approved
0.6774 Remote Similarity NPD9377 Approved
0.6763 Remote Similarity NPD4108 Discontinued
0.6746 Remote Similarity NPD6387 Discontinued
0.6744 Remote Similarity NPD1778 Approved
0.6721 Remote Similarity NPD2684 Approved
0.6719 Remote Similarity NPD1548 Phase 1
0.6719 Remote Similarity NPD7741 Discontinued
0.6716 Remote Similarity NPD4212 Discontinued
0.6715 Remote Similarity NPD2238 Phase 2
0.6714 Remote Similarity NPD2935 Discontinued
0.6714 Remote Similarity NPD1632 Clinical (unspecified phase)
0.6713 Remote Similarity NPD8131 Suspended
0.6696 Remote Similarity NPD6048 Clinical (unspecified phase)
0.6696 Remote Similarity NPD6049 Phase 2
0.6695 Remote Similarity NPD1616 Discontinued
0.6692 Remote Similarity NPD4104 Clinical (unspecified phase)

  Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data