Natural Product: NPC134810

Natural Product IDNPC134810
Common Name
?
The InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
WJQOMUVKRDJBGZ-JQALBYGBSA-N
IUPAC Name n.a.
Synonyms
Synthetic Gene Cluster n.a.
ChEMBL Identifier n.a.
PubChem CID 101923141
Chemical Classification
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0000012] Lipids and lipid-like molecules
      • [CHEMONTID:0000259] Prenol lipids
        • [CHEMONTID:0002049] Terpene glycosides
          • [CHEMONTID:0001580] Triterpene glycosides
            • [CHEMONTID:0002358] Triterpene saponins

The Chemical Classification was calculated by Classyfire, a software for chemical taxonomy calculation. Reference: DOI:10.1186/s13321-016-0174-y.

  Chemical Representations

Standard InCHIKey WJQOMUVKRDJBGZ-JQALBYGBSA-N
Standard InCHI InChI=1S/C42H66O14/c1-37(2)14-16-42(36(51)52)17-15-40(6)20(21(42)18-37)8-9-24-39(5)12-11-25(38(3,4)23(39)10-13-41(24,40)7)54-35-32(29(47)28(46)31(55-35)33(49)50)56-34-30(48)27(45)26(44)22(19-43)53-34/h8,21-32,34-35,43-48H,9-19H2,1-7H3,(H,49,50)(H,51,52)/t21-,22+,23-,24+,25-,26-,27-,28-,29-,30+,31-,32+,34-,35+,39-,40+,41+,42-/m0/s1
SMILES CC1(C)CC[C@@]2(CC[C@]3(C)C(=CC[C@@H]4[C@@]5(C)CC[C@@H](C(C)(C)[C@@H]5CC[C@@]34C)O[C@H]3[C@@H]([C@H]([C@@H]([C@@H](C(=O)O)O3)O)O)O[C@H]3[C@@H]([C@H]([C@H]([C@@H](CO)O3)O)O)O)[C@@H]2C1)C(=O)O

  Calculated Properties

Physi-Chem Properties

Molecular Weight:   794.45 Volume:   790.246
?
Van der Waals volume.
Dense:   1.005 LogP:   2.207
?
The logarithm of the n-octanol/water distribution coefficients.
logD7.4:   2.576
?
The logarithm of the n-octanol/water distribution coefficient at pH=7.4.
LogS:   -3.829
?
The logarithm of aqueous solubility value.
Rotatable Bonds:   7.0 Rigid Bonds:   40.0
TPSA:   232.9
?
Topological Polar Surface Area.
H-Bond Acceptor:   14.0
H-Bond Donor:   8.0 Rings:   7.0
Heavy Atoms:   14.0

MedChem Properties

QED Drug-Likeness Score:   0.137 GASA:   1.0
?
GASA represents the probability of being difficult to synthesize, ranging from 0 to 1.
Synthetic Accessibility Score:   5.763 Fsp3:   0.905
MCE-18:   154.0
?
MCE-18 stands for medicinal chemistry evolution.MCE-18≥45 is considered a suitable value.
Lipinski Rule-of-5:   Accepted
Pfizer Rule:   Rejected GSK Rule:   Accepted
Golden Triangle Rule:   Accepted BMS Rule:   1
Chelating Alert:   0 PAINS Alert:   0
Colloidal aggregators:   0.938 Fluc inhibitor:   0.0
?
The fluc inhibitor value is the probability of being fLuc inhibitors, within the range of 0 to 1.
Blue fluorescence:   0.008
?
The blue fluorescence value is the probability of being blue fluorescence, within the range of 0 to 1
Green fluorescence:   0.001
?
The green fluorescence value is the probability of being green fluorescence, within the range of 0 to 1
Reactive compounds:   0.213 Promiscuous compounds:   0.134

ADMET Properties (ADMETlab3.0)

ADMET: Absorption

Caco-2 Permeability:   -5.951 MDCK Permeability:   -5.169
Pgp-inhibitor:   0.0 Pgp-substrate:   0.002
PAMPA:   1.0
?
The experimental data for Peff was logarithmically transformed (logPeff). Molecules with log Peff values below 2.0 were classified as low-permeability (Category 0), while those with log Peff values exceeding 2.5 were classified as high-permeability (Category 1).
Human Intestinal Absorption (HIA):   0.433
20% Bioavailability (F20%):   0.613 30% Bioavailability (F30%):   0.431
50% Bioavailability (F50%):   0.988

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):   0.0 MRP1:   0.997
Plasma Protein Binding (PPB):   79.898% Volume Distribution (VD):   -0.61
Fu: 14.857%
?
The fraction unbound in plasms.
OATP1B1 inhibitor:   0.999
OATP1B3 inhibitor:   0.275 BCRP inhibitor:   0.0
BSEP inhibitor:   0.0

ADMET: Metabolism

CYP1A2-inhibitor:   0.0 CYP1A2-substrate:   0.0
CYP2C19-inhibitor:   0.0 CYP2C19-substrate:   0.0
CYP2C9-inhibitor:   0.0 CYP2C9-substrate:   0.0
CYP2D6-inhibitor:   0.0 CYP2D6-substrate:   0.0
CYP3A4-inhibitor:   0.0 CYP3A4-substrate:   0.0
CYP2B6-substrate:   0.0 CYP2C8-inhibitor:   0.001
HLM stability:   0.002
?
Human liver microsomal (HLM) stability. Category 0: stable+ (HLM > 30 min); Category 1: unstable- (HLM ≤ 30 min). The output value is the probability of human liver microsomal instability, where a value closer to 1 indicates a higher likelihood of instability.

ADMET: Excretion

Clearance (CL):  0.291 Half-life (T1/2):  2.455

ADMET: Toxicity

hERG Blockers:  0.002 hERG Blockers (10um):  0.002
Human Hepatotoxicity (H-HT):  0.821 Drug-induced Liver Injury (DILI):  0.978
AMES Toxicity:  0.703 Rat Oral Acute Toxicity:  0.043
Maximum Recommended Daily Dose:  0.011 Skin Sensitization:  1.0
Carcinogencity:  0.416 Eye Corrosion:  0.0
Eye Irritation:  0.023 Respiratory Toxicity:  0.135
Drug-induced Neurotoxicity:  0.003 Ototoxicity:  0.99
Hematotoxicity:  0.825 Drug-induced Nephrotoxicity:  0.996
Genotoxicity:  0.875 RPMI-8226 Immunitoxicity:  0.051
A549 Cytotoxicity:  0.33 Hek293 Cytotoxicity:  0.078
BCF:   0.499
?
Bioconcentration factors are used for considering secondary poisoning potential and assessing risks to human health via the food chain. The unit is -log10[(mg/L)/(1000*MW)].
IGC50:   3.481
?
48 hour Tetrahymena pyriformis IGC50. The unit of IGC50 is -log10[(mg/L)/(1000*MW)].
LC50DM:   5.064
?
48 hour Daphnia magna LC50. The unit of LC50DM is -log10[(mg/L)/(1000*MW)].
LC50FM:   4.171
?
96 hour fathead minnow LC50. The unit of LC50FM is -log10[(mg/L)/(1000*MW)].

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO25976 Dendronephthya gigantea Species Nephtheidae Eukaryota n.a. n.a. n.a. PMID[10843584]
NPO27252 Iochroma australe Species Solanaceae Eukaryota n.a. n.a. n.a. PMID[12027740]
NPO26782 Dendrilla membranosa Species Darwinellidae Eukaryota n.a. antarctic n.a. PMID[15270575]
NPO25976 Dendronephthya gigantea Species Nephtheidae Eukaryota n.a. n.a. n.a. PMID[15497934]
NPO25976 Dendronephthya gigantea Species Nephtheidae Eukaryota n.a. n.a. n.a. PMID[30407007]
NPO26453 Prunus lusitanica Species Rosaceae Eukaryota n.a. n.a. n.a. PMID[37240175]
NPO25793 Gremmeniella abietina Species Helotiaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO25717 Maytenus hookeri Species Celastraceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO14466 Penicillium olsonii Species Aspergillaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO3346 Piper sanctum Species Piperaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO26109 Pilocarpus spicatus Species Rutaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO25926 Tephrosia pumila Species Fabaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO26903 Plectranthus purpuratus Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO29051 Ranunculus acris Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO26213 Tephrosia vogelii Species Fabaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO26625 Stichopus chloronotus Species Stichopodidae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO24378 Osmanthus heterophyllus Species Oleaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO25821 Delphinium cashmerianum Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO26782 Dendrilla membranosa Species Darwinellidae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO26078 Mussaenda parviflora Species Rubiaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO25976 Dendronephthya gigantea Species Nephtheidae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO26163 Anisodus tanguticus Species Solanaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO18292 Guarea trichilioides Species Meliaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO26952 Cineraria geifolia Species Asteraceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO26352 Heuchera cylindrica Species Saxifragaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO2344 Carlina acanthifolia Species Asteraceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO25821 Delphinium cashmerianum Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO26163 Anisodus tanguticus Species Solanaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO25717 Maytenus hookeri Species Celastraceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO29051 Ranunculus acris Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO2039 Callerya cinerea Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO25717 Maytenus hookeri Species Celastraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO25821 Delphinium cashmerianum Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO26163 Anisodus tanguticus Species Solanaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO25717 Maytenus hookeri Species Celastraceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO26135 Walsura tubulata Species Meliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26078 Mussaenda parviflora Species Rubiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26163 Anisodus tanguticus Species Solanaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25821 Delphinium cashmerianum Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26952 Cineraria geifolia Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26289 Lecidella chodati Species Lecanoraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26109 Pilocarpus spicatus Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11845 Petrorhagia dubia Species Caryophyllaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26678 Calea pilosa Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25873 Thaminophyllum multiflorum Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25717 Maytenus hookeri Species Celastraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13781 Eremostachys moluccelloides Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26026 Vitis silvestris Species Vitaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26563 Alectoria japonica Species Parmeliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26453 Prunus lusitanica Species Rosaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO29051 Ranunculus acris Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18292 Guarea trichilioides Species Meliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26535 Balanus glandula Species Balanidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26352 Heuchera cylindrica Species Saxifragaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26625 Stichopus chloronotus Species Stichopodidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26754 Stevia connata Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25952 Lastrea thelypteris n.a. n.a. n.a. n.a. n.a. n.a. Database[UNPD]
NPO14466 Penicillium olsonii Species Aspergillaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26213 Tephrosia vogelii Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO2344 Carlina acanthifolia Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO27252 Iochroma australe Species Solanaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26430 Aplysina laevis Species Aplysinidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25741 Aster ageratoides Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26884 Helichrysum davenportii Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO27377 Diaporthe helianthi Species Diaporthaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25793 Gremmeniella abietina Species Helotiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26053 Pluchea suaveolens Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26980 Halocarpus biformis Species Podocarpaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26903 Plectranthus purpuratus Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO2039 Callerya cinerea Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26782 Dendrilla membranosa Species Darwinellidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO7214 Bufotes viridis Species Bufonidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25976 Dendronephthya gigantea Species Nephtheidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26186 Stereocaulon leprocauloides Species Stereocaulaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26377 Amelanchier vulgaris Species Rosaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24378 Osmanthus heterophyllus Species Oleaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25849 Streptomyces lomondensis Species Streptomycetaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO3346 Piper sanctum Species Piperaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26408 Melanophryniscus moreirae Species Bufonidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26727 Eremocarpus setiger n.a. n.a. n.a. n.a. n.a. n.a. Database[UNPD]
NPO25926 Tephrosia pumila Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19823 Vicia benghalensis Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25997 Senecio rupestris Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO137 Nepeta multifida Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26244 Panax papyrifer Species Araliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]

Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].



  NP Quantity Composition/Concentration

Organism ID Organism Name Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference

Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].



 Biological Activity

Molecular-level activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference

In vitro activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference

In vivo activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference





 Experimental ADME

Experiment Model Experiment Tissue ADME Type ADME Relation ADME Value ADME Unit Reference





 Experimental Toxicity

Quantitative toxicity

Experiment Model Experiment Organism Toxicity Type Toxicity Relation Toxicity Value Toxicity Unit Reference

Common Abbreviations:
LC: Lethal Concentration; LD: Lethal Dose; LT:Lethal Time; NOAEL: No-observed-adverse-effect Level; BMDL: Benchmark Dose Lower Confidence Limit; BMD: Benchmark Dose; BMC:Benchmark Concentration; LOAEL: Lowest Observed Adverse Effect Level; RfD:Reference Dose; RfC:Reference Concentration; MRL: Minimal Risk Level; MEG: Maximum Exposure Guideline; PAC: Protective Action Criteria

Categorical toxicity labels

Hepatotoxicity Carcinogenicity Mutagenicity Cardiotoxicity Respiratory Toxicity Eye Irritation Endocrine Disruption
Hepatotoxicity Carcinogenicity Mutagenicity Cardiotoxicity Respiratory Toxicity Eye Irritation Endocrine Disruption

Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP toxicity records from domain-specific databases. These databases include:
ToxValDB: a curated database that compiles quantitative toxicity values for chemicals from diverse public sources to support toxicological research and risk assessment.
TOXRIC: a comprehensive, free-to-access, online database providing toxicological/feature data. The toxicity labels are retrieved from this database. [PMID: 36400569]


  Chemically structural similarity

Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes approximately 50,000 NPs with experimentally-derived bioactivity available in NPASS)

Similarity is measured using the Tanimoto coefficient (Tc) , which compares the binary fingerprints of two molecules. Tc is calculated as the intersection divided by the union of '1' bits in the fingerprints, ranging from 0 to 1, with 1 indicating highest similarity.

●  The left chart: Distribution of similarity level between NPC134810 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.5 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC472949
0.8523 High Similarity NPC164194
0.8235 Intermediate Similarity NPC606107
0.8172 Intermediate Similarity NPC22956
0.8152 Intermediate Similarity NPC127056
0.8043 Intermediate Similarity NPC25605
0.7812 Intermediate Similarity NPC114304
0.7684 Intermediate Similarity NPC488561
0.764 Intermediate Similarity NPC286347
0.7579 Intermediate Similarity NPC109079
0.7576 Intermediate Similarity NPC257468
0.75 Intermediate Similarity NPC204407
0.7474 Intermediate Similarity NPC59804
0.7368 Intermediate Similarity NPC12288
0.7353 Intermediate Similarity NPC324875
0.7353 Intermediate Similarity NPC292677
0.7292 Intermediate Similarity NPC56713
0.7282 Intermediate Similarity NPC488564
0.72 Intermediate Similarity NPC251768
0.7157 Intermediate Similarity NPC79718
0.7157 Intermediate Similarity NPC119794
0.7041 Intermediate Similarity NPC114441
0.703 Intermediate Similarity NPC180550
0.703 Intermediate Similarity NPC35405
0.701 Intermediate Similarity NPC136877
0.6979 Remote Similarity NPC270667
0.6972 Remote Similarity NPC166422
0.6972 Remote Similarity NPC219180
0.6961 Remote Similarity NPC139044
0.69 Remote Similarity NPC80843
0.6882 Remote Similarity NPC31839
0.6863 Remote Similarity NPC104400
0.6863 Remote Similarity NPC10320
0.6848 Remote Similarity NPC283849
0.6832 Remote Similarity NPC469945
0.6827 Remote Similarity NPC64715
0.6822 Remote Similarity NPC480939
0.6818 Remote Similarity NPC251263
0.6771 Remote Similarity NPC191410
0.6768 Remote Similarity NPC174679
0.6768 Remote Similarity NPC279554
0.6762 Remote Similarity NPC276093
0.6698 Remote Similarity NPC301449
0.6698 Remote Similarity NPC323359
0.6698 Remote Similarity NPC601290
0.6696 Remote Similarity NPC54636
0.6667 Remote Similarity NPC294112
0.6667 Remote Similarity NPC62725
0.6634 Remote Similarity NPC6377
0.6634 Remote Similarity NPC208381
0.66 Remote Similarity NPC309780
0.6571 Remote Similarity NPC481082
0.6571 Remote Similarity NPC164419
0.6476 Remote Similarity NPC118440
0.6429 Remote Similarity NPC323341
0.6364 Remote Similarity NPC475472
0.6346 Remote Similarity NPC192791
0.6321 Remote Similarity NPC471383
0.6316 Remote Similarity NPC28198
0.6316 Remote Similarity NPC476123
0.6306 Remote Similarity NPC288205
0.6306 Remote Similarity NPC51465
0.6296 Remote Similarity NPC114692
0.6283 Remote Similarity NPC133818
0.6273 Remote Similarity NPC475486
0.6262 Remote Similarity NPC131469
0.6216 Remote Similarity NPC280941
0.6216 Remote Similarity NPC235772
0.6214 Remote Similarity NPC482748
0.6204 Remote Similarity NPC95437
0.6204 Remote Similarity NPC302887
0.62 Remote Similarity NPC480938
0.6182 Remote Similarity NPC187618
0.6147 Remote Similarity NPC236657
0.6134 Remote Similarity NPC161717
0.6111 Remote Similarity NPC73829
0.605 Remote Similarity NPC258617
0.6036 Remote Similarity NPC120116
0.6036 Remote Similarity NPC160452
0.6 Remote Similarity NPC471385
0.6 Remote Similarity NPC284807
0.6 Remote Similarity NPC157868
0.5979 Remote Similarity NPC57362
0.596 Remote Similarity NPC100383
0.5946 Remote Similarity NPC23275
0.5926 Remote Similarity NPC44716
0.5909 Remote Similarity NPC488515
0.5893 Remote Similarity NPC488209
0.5882 Remote Similarity NPC470518
0.5877 Remote Similarity NPC476992
0.5872 Remote Similarity NPC475591
0.5872 Remote Similarity NPC236870
0.5862 Remote Similarity NPC471384
0.5842 Remote Similarity NPC475633
0.5841 Remote Similarity NPC469947
0.5841 Remote Similarity NPC480948
0.5826 Remote Similarity NPC313110
0.5804 Remote Similarity NPC482737
0.5804 Remote Similarity NPC477075
0.58 Remote Similarity NPC242611
0.5798 Remote Similarity NPC329923
0.5798 Remote Similarity NPC475281
0.5778 Remote Similarity NPC120840
0.5763 Remote Similarity NPC470218
0.5702 Remote Similarity NPC187290
0.5701 Remote Similarity NPC488516
0.5691 Remote Similarity NPC111466
0.5688 Remote Similarity NPC605226
0.5673 Remote Similarity NPC76999
0.5664 Remote Similarity NPC218954
0.5664 Remote Similarity NPC291903
0.5664 Remote Similarity NPC477076
0.5664 Remote Similarity NPC477079
0.5652 Remote Similarity NPC480936
0.5636 Remote Similarity NPC159309
0.5636 Remote Similarity NPC473383
0.5636 Remote Similarity NPC86222
0.563 Remote Similarity NPC283417
0.563 Remote Similarity NPC200049
0.5614 Remote Similarity NPC477077
0.5614 Remote Similarity NPC477078
0.5603 Remote Similarity NPC475119
0.5596 Remote Similarity NPC75417
0.5577 Remote Similarity NPC473481
0.5565 Remote Similarity NPC329657
0.5556 Remote Similarity NPC473884
0.5556 Remote Similarity NPC473824
0.5556 Remote Similarity NPC603026
0.5534 Remote Similarity NPC473538
0.5534 Remote Similarity NPC480937
0.5495 Remote Similarity NPC40775
0.547 Remote Similarity NPC471962
0.5447 Remote Similarity NPC265841
0.5447 Remote Similarity NPC488308
0.5444 Remote Similarity NPC480946
0.5444 Remote Similarity NPC130577
0.5444 Remote Similarity NPC142415
0.5444 Remote Similarity NPC102683
0.5439 Remote Similarity NPC247315
0.5439 Remote Similarity NPC482728
0.5439 Remote Similarity NPC114484
0.541 Remote Similarity NPC181066
0.541 Remote Similarity NPC82380
0.541 Remote Similarity NPC244296
0.5403 Remote Similarity NPC312650
0.5385 Remote Similarity NPC270768
0.5385 Remote Similarity NPC59263
0.5385 Remote Similarity NPC210106
0.5378 Remote Similarity NPC151543
0.5372 Remote Similarity NPC475140
0.537 Remote Similarity NPC108748
0.5366 Remote Similarity NPC484061
0.5366 Remote Similarity NPC484062
0.5364 Remote Similarity NPC482747
0.5364 Remote Similarity NPC202666
0.5364 Remote Similarity NPC471961
0.5364 Remote Similarity NPC242015
0.5364 Remote Similarity NPC469946
0.5364 Remote Similarity NPC482717
0.5351 Remote Similarity NPC262199
0.5321 Remote Similarity NPC275343
0.5315 Remote Similarity NPC242840
0.5315 Remote Similarity NPC112352
0.5312 Remote Similarity NPC488309
0.531 Remote Similarity NPC63159
0.5304 Remote Similarity NPC281148
0.5289 Remote Similarity NPC482736
0.5289 Remote Similarity NPC482738
0.5285 Remote Similarity NPC4749
0.5285 Remote Similarity NPC71391
0.5285 Remote Similarity NPC488211
0.528 Remote Similarity NPC271610
0.5273 Remote Similarity NPC470512
0.5273 Remote Similarity NPC482751
0.5268 Remote Similarity NPC471965
0.5268 Remote Similarity NPC482749
0.5259 Remote Similarity NPC75318
0.5242 Remote Similarity NPC21691
0.5238 Remote Similarity NPC484059
0.5238 Remote Similarity NPC484060
0.5229 Remote Similarity NPC482750
0.5225 Remote Similarity NPC263756
0.5225 Remote Similarity NPC213674
0.5225 Remote Similarity NPC475171
0.5217 Remote Similarity NPC275809
0.521 Remote Similarity NPC25998
0.5203 Remote Similarity NPC47995
0.5203 Remote Similarity NPC277212
0.5203 Remote Similarity NPC30279
0.5194 Remote Similarity NPC484063
0.5194 Remote Similarity NPC484064
0.5189 Remote Similarity NPC480943
0.5185 Remote Similarity NPC48499
0.5182 Remote Similarity NPC480424
0.5182 Remote Similarity NPC40085
0.5175 Remote Similarity NPC258885
0.5175 Remote Similarity NPC482722
0.5175 Remote Similarity NPC471963
0.5167 Remote Similarity NPC609119
0.5161 Remote Similarity NPC158141

Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC134810 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.5 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.5364 Remote Similarity NPD8328 Phase 2

Bioactivity similarity

  Bioactivity similarity

Similar Natural Products in NPASS

Similarity level is defined by Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.
Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data