Structure

Physi-Chem Properties

Molecular Weight:  2005.17
Volume:  2015.049
LogP:  1.077
LogD:  3.68
LogS:  -0.986
# Rotatable Bonds:  61
TPSA:  781.27
# H-Bond Aceptor:  48
# H-Bond Donor:  26
# Rings:  3
# Heavy Atoms:  48

MedChem Properties

QED Drug-Likeness Score:  0.016
Synthetic Accessibility Score:  8.464
Fsp3:  0.691
Lipinski Rule-of-5:  Rejected
Pfizer Rule:  Accepted
GSK Rule:  Rejected
BMS Rule:  1
Golden Triangle Rule:  Rejected
Chelating Alert:  0
PAINS Alert:  0

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

Caco-2 Permeability:  0.995
MDCK Permeability:  0.053685806691646576
Pgp-inhibitor:  0.021
Pgp-substrate:  1.0
Human Intestinal Absorption (HIA):  1.0
20% Bioavailability (F20%):  0.913
30% Bioavailability (F30%):  0.937

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):  1.0
Plasma Protein Binding (PPB):  28.579605102539062%
Volume Distribution (VD):  -0.265
Pgp-substrate:  33.18336486816406%

ADMET: Metabolism

CYP1A2-inhibitor:  0.0
CYP1A2-substrate:  0.0
CYP2C19-inhibitor:  0.0
CYP2C19-substrate:  0.017
CYP2C9-inhibitor:  0.0
CYP2C9-substrate:  0.0
CYP2D6-inhibitor:  0.0
CYP2D6-substrate:  0.002
CYP3A4-inhibitor:  0.002
CYP3A4-substrate:  0.0

ADMET: Excretion

Clearance (CL):  -1.8
Half-life (T1/2):  0.113

ADMET: Toxicity

hERG Blockers:  0.0
Human Hepatotoxicity (H-HT):  1.0
Drug-inuced Liver Injury (DILI):  0.997
AMES Toxicity:  0.001
Rat Oral Acute Toxicity:  0.0
Maximum Recommended Daily Dose:  0.635
Skin Sensitization:  0.966
Carcinogencity:  0.343
Eye Corrosion:  0.003
Eye Irritation:  0.024
Respiratory Toxicity:  0.825

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs  

  Natural Product: NPC141050

Natural Product ID:  NPC141050
Common Name*:   Septocylindrin B
IUPAC Name:   n.a.
Synonyms:   septocylindrin B
Standard InCHIKey:  CRWYZHLCSZFGGI-FJZKTHDKSA-N
Standard InCHI:  InChI=1S/C94H156N24O24/c1-49(2)45-60(74(130)112-94(24,25)86(142)117-42-29-33-61(117)75(131)107-67(50(3)4)77(133)115-92(20,21)84(140)116-91(18,19)82(138)106-58(36-39-64(96)122)72(128)105-57(35-38-63(95)121)71(127)102-56(47-98-41-44-119)46-55-31-27-26-28-32-55)103-66(124)48-99-79(135)87(10,11)114-78(134)68(51(5)6)108-83(139)90(16,17)111-73(129)59(37-40-65(97)123)104-69(125)52(7)100-80(136)88(12,13)110-70(126)53(8)101-81(137)89(14,15)113-76(132)62-34-30-43-118(62)85(141)93(22,23)109-54(9)120/h26-28,31-32,49-53,56-62,67-68,98,119H,29-30,33-48H2,1-25H3,(H2,95,121)(H2,96,122)(H2,97,123)(H,99,135)(H,100,136)(H,101,137)(H,102,127)(H,103,124)(H,104,125)(H,105,128)(H,106,138)(H,107,131)(H,108,139)(H,109,120)(H,110,126)(H,111,129)(H,112,130)(H,113,132)(H,114,134)(H,115,133)(H,116,140)/t52-,53-,56-,57-,58-,59-,60-,61-,62-,67-,68-/m0/s1
SMILES:  OCCNC[C@@H](N=C([C@@H](N=C([C@@H](N=C(C(N=C(C(N=C([C@H](C(C)C)N=C([C@@H]1CCCN1C(=O)C(N=C([C@@H](N=C(CN=C(C(N=C([C@H](C(C)C)N=C(C(N=C([C@@H](N=C([C@@H](N=C(C(N=C([C@@H](N=C(C(N=C([C@@H]1CCCN1C(=O)C(N=C(O)C)(C)C)O)(C)C)O)C)O)(C)C)O)C)O)CCC(=N)O)O)(C)C)O)O)(C)C)O)O)CC(C)C)O)(C)C)O)O)(C)C)O)(C)C)O)CCC(=N)O)O)CCC(=N)O)O)Cc1ccccc1
Synthetic Gene Cluster:   n.a.
ChEMBL Identifier:   CHEMBL2372610
PubChem CID:   73347201
Chemical Classification**:  
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0003297] Organic Polymers
      • [CHEMONTID:0003298] Polypeptides

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO33032 septocylindrium sp. ll-z1518 Species n.a. n.a. n.a. n.a. n.a. PMID[17288478]

☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  NP Quantity Composition/Concentration

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference

☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT16 Organism Staphylococcus aureus Staphylococcus aureus MIC = 8.0 ug.mL-1 PMID[493192]
NPT16 Organism Staphylococcus aureus Staphylococcus aureus MIC = 16.0 ug.mL-1 PMID[493192]
NPT1531 Organism Enterococcus faecium Enterococcus faecium MIC = 8.0 ug.mL-1 PMID[493192]
NPT19 Organism Escherichia coli Escherichia coli MIC = 8.0 ug.mL-1 PMID[493192]
NPT19 Organism Escherichia coli Escherichia coli MIC > 128.0 ug.mL-1 PMID[493192]
NPT20 Organism Candida albicans Candida albicans MIC = 16.0 ug.mL-1 PMID[493192]

☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

  Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC141050 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9248 High Similarity NPC77905
0.8722 High Similarity NPC287401
0.8712 High Similarity NPC130309
0.8594 High Similarity NPC202521
0.8516 High Similarity NPC476990
0.8462 Intermediate Similarity NPC46427
0.8462 Intermediate Similarity NPC6975
0.8385 Intermediate Similarity NPC252878
0.8372 Intermediate Similarity NPC200964
0.8298 Intermediate Similarity NPC315266
0.8227 Intermediate Similarity NPC476978
0.8227 Intermediate Similarity NPC52748
0.8222 Intermediate Similarity NPC200589
0.8188 Intermediate Similarity NPC469901
0.8138 Intermediate Similarity NPC7817
0.8138 Intermediate Similarity NPC475168
0.8121 Intermediate Similarity NPC469898
0.8095 Intermediate Similarity NPC470902
0.8088 Intermediate Similarity NPC300315
0.8074 Intermediate Similarity NPC319766
0.8069 Intermediate Similarity NPC2501
0.8029 Intermediate Similarity NPC255447
0.8 Intermediate Similarity NPC471821
0.8 Intermediate Similarity NPC471820
0.7987 Intermediate Similarity NPC473000
0.7986 Intermediate Similarity NPC314358
0.7973 Intermediate Similarity NPC473002
0.7933 Intermediate Similarity NPC324850
0.7919 Intermediate Similarity NPC469903
0.7917 Intermediate Similarity NPC316008
0.7917 Intermediate Similarity NPC313867
0.7905 Intermediate Similarity NPC122590
0.7895 Intermediate Similarity NPC71684
0.7847 Intermediate Similarity NPC315283
0.7847 Intermediate Similarity NPC314388
0.7817 Intermediate Similarity NPC89489
0.7803 Intermediate Similarity NPC470546
0.78 Intermediate Similarity NPC244509
0.7786 Intermediate Similarity NPC470544
0.7785 Intermediate Similarity NPC56685
0.7754 Intermediate Similarity NPC111428
0.7746 Intermediate Similarity NPC471264
0.7746 Intermediate Similarity NPC471265
0.774 Intermediate Similarity NPC262077
0.7736 Intermediate Similarity NPC469900
0.7727 Intermediate Similarity NPC470545
0.7712 Intermediate Similarity NPC469902
0.7712 Intermediate Similarity NPC473003
0.7697 Intermediate Similarity NPC297145
0.7697 Intermediate Similarity NPC197743
0.7692 Intermediate Similarity NPC476133
0.7692 Intermediate Similarity NPC92784
0.7692 Intermediate Similarity NPC470884
0.7692 Intermediate Similarity NPC98424
0.7692 Intermediate Similarity NPC178662
0.7667 Intermediate Similarity NPC473341
0.7667 Intermediate Similarity NPC262166
0.7664 Intermediate Similarity NPC101719
0.7652 Intermediate Similarity NPC285926
0.7652 Intermediate Similarity NPC14672
0.7652 Intermediate Similarity NPC315276
0.7652 Intermediate Similarity NPC239357
0.7647 Intermediate Similarity NPC175726
0.7647 Intermediate Similarity NPC244336
0.7647 Intermediate Similarity NPC474082
0.7639 Intermediate Similarity NPC239762
0.7639 Intermediate Similarity NPC163392
0.7635 Intermediate Similarity NPC240848
0.7626 Intermediate Similarity NPC473322
0.7606 Intermediate Similarity NPC248283
0.7591 Intermediate Similarity NPC22746
0.7591 Intermediate Similarity NPC222466
0.7582 Intermediate Similarity NPC326349
0.7582 Intermediate Similarity NPC323336
0.7569 Intermediate Similarity NPC132636
0.7562 Intermediate Similarity NPC477462
0.7551 Intermediate Similarity NPC5620
0.7547 Intermediate Similarity NPC328494
0.7532 Intermediate Similarity NPC1390
0.7532 Intermediate Similarity NPC62104
0.7517 Intermediate Similarity NPC476259
0.7434 Intermediate Similarity NPC261934
0.7434 Intermediate Similarity NPC5194
0.7434 Intermediate Similarity NPC202198
0.7432 Intermediate Similarity NPC209509
0.7432 Intermediate Similarity NPC322878
0.7421 Intermediate Similarity NPC469904
0.7417 Intermediate Similarity NPC473491
0.7378 Intermediate Similarity NPC472999
0.7372 Intermediate Similarity NPC471527
0.7368 Intermediate Similarity NPC300443
0.7358 Intermediate Similarity NPC63040
0.7351 Intermediate Similarity NPC129666
0.7351 Intermediate Similarity NPC283783
0.7347 Intermediate Similarity NPC269398
0.7347 Intermediate Similarity NPC263493
0.7342 Intermediate Similarity NPC210377
0.7342 Intermediate Similarity NPC5719
0.7342 Intermediate Similarity NPC22883
0.7342 Intermediate Similarity NPC217804
0.7333 Intermediate Similarity NPC311658
0.7325 Intermediate Similarity NPC241794
0.7325 Intermediate Similarity NPC73655
0.7297 Intermediate Similarity NPC176226
0.7297 Intermediate Similarity NPC161069
0.7296 Intermediate Similarity NPC61004
0.7296 Intermediate Similarity NPC15068
0.7279 Intermediate Similarity NPC46098
0.7279 Intermediate Similarity NPC268841
0.7279 Intermediate Similarity NPC307357
0.7256 Intermediate Similarity NPC473001
0.7255 Intermediate Similarity NPC162104
0.725 Intermediate Similarity NPC328649
0.725 Intermediate Similarity NPC302597
0.7239 Intermediate Similarity NPC33742
0.723 Intermediate Similarity NPC476989
0.723 Intermediate Similarity NPC168113
0.7222 Intermediate Similarity NPC246079
0.7181 Intermediate Similarity NPC197682
0.7168 Intermediate Similarity NPC477638
0.7168 Intermediate Similarity NPC477632
0.7164 Intermediate Similarity NPC35850
0.7164 Intermediate Similarity NPC276949
0.716 Intermediate Similarity NPC475123
0.716 Intermediate Similarity NPC46009
0.716 Intermediate Similarity NPC475204
0.7143 Intermediate Similarity NPC68865
0.7143 Intermediate Similarity NPC127741
0.7135 Intermediate Similarity NPC477636
0.7134 Intermediate Similarity NPC471165
0.7114 Intermediate Similarity NPC469426
0.7114 Intermediate Similarity NPC469427
0.7105 Intermediate Similarity NPC138775
0.7105 Intermediate Similarity NPC16188
0.7105 Intermediate Similarity NPC329761
0.7105 Intermediate Similarity NPC225648
0.7102 Intermediate Similarity NPC100321
0.7099 Intermediate Similarity NPC129486
0.709 Intermediate Similarity NPC474584
0.7086 Intermediate Similarity NPC201244
0.7086 Intermediate Similarity NPC477217
0.7075 Intermediate Similarity NPC314835
0.7067 Intermediate Similarity NPC139326
0.7052 Intermediate Similarity NPC477631
0.703 Intermediate Similarity NPC136797
0.7024 Intermediate Similarity NPC477637
0.7019 Intermediate Similarity NPC63931
0.7006 Intermediate Similarity NPC476268
0.7 Intermediate Similarity NPC68650
0.6994 Remote Similarity NPC280022
0.6993 Remote Similarity NPC145113
0.6993 Remote Similarity NPC135121
0.6981 Remote Similarity NPC24617
0.697 Remote Similarity NPC475532
0.6954 Remote Similarity NPC468984
0.6937 Remote Similarity NPC114806
0.6933 Remote Similarity NPC141957
0.6932 Remote Similarity NPC329295
0.6932 Remote Similarity NPC477639
0.6929 Remote Similarity NPC473501
0.6929 Remote Similarity NPC475439
0.6928 Remote Similarity NPC165285
0.6928 Remote Similarity NPC17698
0.6923 Remote Similarity NPC473404
0.6914 Remote Similarity NPC472923
0.6906 Remote Similarity NPC314992
0.6897 Remote Similarity NPC469666
0.6894 Remote Similarity NPC327481
0.6884 Remote Similarity NPC2265
0.6875 Remote Similarity NPC477937
0.687 Remote Similarity NPC194390
0.687 Remote Similarity NPC88267
0.687 Remote Similarity NPC113326
0.687 Remote Similarity NPC224610
0.6867 Remote Similarity NPC306804
0.6867 Remote Similarity NPC137627
0.6863 Remote Similarity NPC471680
0.685 Remote Similarity NPC25565
0.6839 Remote Similarity NPC105717
0.6826 Remote Similarity NPC26108
0.6818 Remote Similarity NPC314114
0.6815 Remote Similarity NPC233702
0.6812 Remote Similarity NPC101139
0.6809 Remote Similarity NPC477061
0.6809 Remote Similarity NPC478015
0.6809 Remote Similarity NPC45777
0.6809 Remote Similarity NPC478014
0.6809 Remote Similarity NPC478016
0.6805 Remote Similarity NPC97526
0.6805 Remote Similarity NPC119652
0.6792 Remote Similarity NPC473580
0.6767 Remote Similarity NPC474804
0.6767 Remote Similarity NPC130898
0.6767 Remote Similarity NPC474973
0.6766 Remote Similarity NPC273755
0.676 Remote Similarity NPC473640
0.6757 Remote Similarity NPC325479
0.6748 Remote Similarity NPC471052
0.6748 Remote Similarity NPC471053
0.6748 Remote Similarity NPC471051

  Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC141050 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8358 Intermediate Similarity NPD7979 Clinical (unspecified phase)
0.8346 Intermediate Similarity NPD5339 Clinical (unspecified phase)
0.8014 Intermediate Similarity NPD7728 Clinical (unspecified phase)
0.8 Intermediate Similarity NPD4782 Clinical (unspecified phase)
0.7986 Intermediate Similarity NPD4791 Clinical (unspecified phase)
0.7872 Intermediate Similarity NPD8173 Phase 2
0.7872 Intermediate Similarity NPD8172 Phase 2
0.7778 Intermediate Similarity NPD8076 Discontinued
0.7714 Intermediate Similarity NPD3632 Clinical (unspecified phase)
0.7692 Intermediate Similarity NPD6901 Phase 3
0.7676 Intermediate Similarity NPD7113 Clinical (unspecified phase)
0.7647 Intermediate Similarity NPD2584 Suspended
0.7606 Intermediate Similarity NPD8416 Discontinued
0.7603 Intermediate Similarity NPD5341 Clinical (unspecified phase)
0.7518 Intermediate Similarity NPD3071 Approved
0.7518 Intermediate Similarity NPD3072 Approved
0.7518 Intermediate Similarity NPD3073 Approved
0.7517 Intermediate Similarity NPD8290 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD4175 Approved
0.75 Intermediate Similarity NPD4177 Approved
0.75 Intermediate Similarity NPD5725 Approved
0.7468 Intermediate Similarity NPD7118 Clinical (unspecified phase)
0.7447 Intermediate Similarity NPD4676 Approved
0.7445 Intermediate Similarity NPD4761 Approved
0.7445 Intermediate Similarity NPD4762 Approved
0.7394 Intermediate Similarity NPD6919 Clinical (unspecified phase)
0.7379 Intermediate Similarity NPD6073 Approved
0.7357 Intermediate Similarity NPD2585 Clinical (unspecified phase)
0.7351 Intermediate Similarity NPD6631 Clinical (unspecified phase)
0.7351 Intermediate Similarity NPD7892 Clinical (unspecified phase)
0.7324 Intermediate Similarity NPD5263 Approved
0.7299 Intermediate Similarity NPD7342 Discontinued
0.7292 Intermediate Similarity NPD7634 Clinical (unspecified phase)
0.729 Intermediate Similarity NPD7267 Clinical (unspecified phase)
0.7203 Intermediate Similarity NPD4125 Approved
0.72 Intermediate Similarity NPD6860 Clinical (unspecified phase)
0.7192 Intermediate Similarity NPD8643 Discontinued
0.7188 Intermediate Similarity NPD8303 Discontinued
0.7172 Intermediate Similarity NPD5747 Discontinued
0.7163 Intermediate Similarity NPD5367 Discontinued
0.7154 Intermediate Similarity NPD7130 Phase 3
0.7124 Intermediate Similarity NPD6088 Approved
0.7103 Intermediate Similarity NPD1330 Phase 2
0.7103 Intermediate Similarity NPD1329 Clinical (unspecified phase)
0.7095 Intermediate Similarity NPD4126 Approved
0.7086 Intermediate Similarity NPD5265 Approved
0.7086 Intermediate Similarity NPD5264 Approved
0.7071 Intermediate Similarity NPD4706 Clinical (unspecified phase)
0.7063 Intermediate Similarity NPD3588 Discontinued
0.7047 Intermediate Similarity NPD5301 Clinical (unspecified phase)
0.7034 Intermediate Similarity NPD4794 Discontinued
0.7032 Intermediate Similarity NPD7613 Discontinued
0.7014 Intermediate Similarity NPD3626 Phase 3
0.7014 Intermediate Similarity NPD3040 Approved
0.7007 Intermediate Similarity NPD5323 Approved
0.7007 Intermediate Similarity NPD4153 Approved
0.6993 Remote Similarity NPD8323 Discontinued
0.6972 Remote Similarity NPD4677 Discontinued
0.697 Remote Similarity NPD8124 Phase 3
0.697 Remote Similarity NPD7964 Clinical (unspecified phase)
0.697 Remote Similarity NPD7965 Phase 2
0.697 Remote Similarity NPD8126 Clinical (unspecified phase)
0.6959 Remote Similarity NPD4757 Clinical (unspecified phase)
0.6954 Remote Similarity NPD7720 Phase 2
0.6954 Remote Similarity NPD2087 Approved
0.6954 Remote Similarity NPD2088 Approved
0.6944 Remote Similarity NPD3604 Clinical (unspecified phase)
0.6943 Remote Similarity NPD6670 Clinical (unspecified phase)
0.6923 Remote Similarity NPD6078 Clinical (unspecified phase)
0.6908 Remote Similarity NPD6681 Discovery
0.6906 Remote Similarity NPD2218 Phase 2
0.6906 Remote Similarity NPD2217 Approved
0.6892 Remote Similarity NPD6623 Phase 3
0.6871 Remote Similarity NPD2078 Clinical (unspecified phase)
0.6871 Remote Similarity NPD5299 Approved
0.6857 Remote Similarity NPD4504 Clinical (unspecified phase)
0.6846 Remote Similarity NPD3908 Approved
0.6835 Remote Similarity NPD8315 Phase 1
0.6828 Remote Similarity NPD3608 Clinical (unspecified phase)
0.6812 Remote Similarity NPD7508 Discontinued
0.6779 Remote Similarity NPD5296 Approved
0.6759 Remote Similarity NPD3029 Clinical (unspecified phase)
0.6755 Remote Similarity NPD6852 Discontinued
0.6746 Remote Similarity NPD1814 Approved
0.6746 Remote Similarity NPD1812 Approved
0.6735 Remote Similarity NPD6359 Clinical (unspecified phase)
0.6732 Remote Similarity NPD2022 Approved
0.673 Remote Similarity NPD4647 Approved
0.673 Remote Similarity NPD4646 Approved
0.673 Remote Similarity NPD4648 Approved
0.6728 Remote Similarity NPD4557 Approved
0.6714 Remote Similarity NPD7522 Discontinued
0.6712 Remote Similarity NPD4151 Approved
0.671 Remote Similarity NPD6676 Phase 2
0.6709 Remote Similarity NPD5230 Approved
0.6709 Remote Similarity NPD5229 Approved
0.6706 Remote Similarity NPD6368 Clinical (unspecified phase)
0.669 Remote Similarity NPD3125 Approved
0.669 Remote Similarity NPD6792 Phase 3
0.6689 Remote Similarity NPD2044 Approved
0.6689 Remote Similarity NPD2048 Approved
0.6689 Remote Similarity NPD2047 Approved
0.6689 Remote Similarity NPD21 Approved
0.6689 Remote Similarity NPD2046 Approved
0.6689 Remote Similarity NPD8125 Discontinued
0.6689 Remote Similarity NPD2045 Approved
0.6689 Remote Similarity NPD2043 Approved
0.6689 Remote Similarity NPD2051 Approved
0.6689 Remote Similarity NPD2049 Clinical (unspecified phase)
0.6689 Remote Similarity NPD2050 Clinical (unspecified phase)
0.6687 Remote Similarity NPD6304 Approved
0.6687 Remote Similarity NPD6303 Approved
0.6686 Remote Similarity NPD8022 Clinical (unspecified phase)
0.6667 Remote Similarity NPD7602 Clinical (unspecified phase)
0.6645 Remote Similarity NPD6294 Approved
0.6645 Remote Similarity NPD6295 Approved
0.6644 Remote Similarity NPD5581 Approved
0.6624 Remote Similarity NPD3510 Approved
0.6624 Remote Similarity NPD3509 Approved
0.66 Remote Similarity NPD941 Approved
0.6587 Remote Similarity NPD7484 Phase 3
0.6587 Remote Similarity NPD7485 Phase 3
0.6582 Remote Similarity NPD3988 Approved
0.6582 Remote Similarity NPD3987 Approved
0.6571 Remote Similarity NPD1348 Approved
0.6564 Remote Similarity NPD8630 Approved
0.6556 Remote Similarity NPD8265 Approved
0.6545 Remote Similarity NPD8351 Phase 2
0.6525 Remote Similarity NPD3123 Discovery
0.6524 Remote Similarity NPD4567 Approved
0.6524 Remote Similarity NPD4566 Approved
0.6516 Remote Similarity NPD7978 Discontinued
0.65 Remote Similarity NPD7303 Discontinued
0.65 Remote Similarity NPD747 Discontinued
0.6497 Remote Similarity NPD5298 Clinical (unspecified phase)
0.6494 Remote Similarity NPD4158 Clinical (unspecified phase)
0.6494 Remote Similarity NPD3480 Approved
0.6479 Remote Similarity NPD3806 Clinical (unspecified phase)
0.6478 Remote Similarity NPD5613 Approved
0.6478 Remote Similarity NPD5614 Approved
0.6474 Remote Similarity NPD6119 Clinical (unspecified phase)
0.6467 Remote Similarity NPD4497 Clinical (unspecified phase)
0.6463 Remote Similarity NPD2031 Discontinued
0.6444 Remote Similarity NPD999 Phase 2
0.6444 Remote Similarity NPD1040 Phase 2
0.6443 Remote Similarity NPD5759 Approved
0.6443 Remote Similarity NPD7828 Discontinued
0.6439 Remote Similarity NPD787 Suspended
0.6433 Remote Similarity NPD3508 Approved
0.6429 Remote Similarity NPD4214 Discontinued
0.642 Remote Similarity NPD6557 Phase 2
0.6415 Remote Similarity NPD6609 Clinical (unspecified phase)
0.6414 Remote Similarity NPD2956 Clinical (unspecified phase)
0.6412 Remote Similarity NPD528 Clinical (unspecified phase)
0.6408 Remote Similarity NPD1344 Phase 2
0.6405 Remote Similarity NPD5780 Phase 2
0.6392 Remote Similarity NPD1968 Approved
0.6392 Remote Similarity NPD1967 Approved
0.6391 Remote Similarity NPD4760 Clinical (unspecified phase)
0.6389 Remote Similarity NPD1922 Discontinued
0.6386 Remote Similarity NPD2097 Approved
0.6386 Remote Similarity NPD7080 Clinical (unspecified phase)
0.6382 Remote Similarity NPD3561 Clinical (unspecified phase)
0.6375 Remote Similarity NPD2014 Approved
0.6375 Remote Similarity NPD2016 Approved
0.6375 Remote Similarity NPD2013 Approved
0.6369 Remote Similarity NPD2436 Approved
0.6369 Remote Similarity NPD2437 Approved
0.6358 Remote Similarity NPD3136 Phase 2
0.6357 Remote Similarity NPD480 Approved
0.6353 Remote Similarity NPD4652 Approved
0.6348 Remote Similarity NPD8103 Clinical (unspecified phase)
0.6346 Remote Similarity NPD7512 Approved
0.6346 Remote Similarity NPD7511 Approved
0.6341 Remote Similarity NPD2891 Approved
0.6341 Remote Similarity NPD8417 Discontinued
0.6338 Remote Similarity NPD2622 Approved
0.6333 Remote Similarity NPD8240 Discontinued
0.6331 Remote Similarity NPD2583 Phase 2
0.6327 Remote Similarity NPD5335 Discontinued
0.6324 Remote Similarity NPD5717 Approved
0.6323 Remote Similarity NPD8154 Clinical (unspecified phase)
0.6319 Remote Similarity NPD6343 Approved
0.6319 Remote Similarity NPD6345 Approved
0.6312 Remote Similarity NPD3519 Discontinued
0.631 Remote Similarity NPD2098 Approved
0.6309 Remote Similarity NPD3606 Clinical (unspecified phase)
0.6306 Remote Similarity NPD2093 Discontinued
0.6296 Remote Similarity NPD5638 Approved
0.628 Remote Similarity NPD2603 Clinical (unspecified phase)
0.6277 Remote Similarity NPD8272 Phase 2
0.627 Remote Similarity NPD7621 Clinical (unspecified phase)
0.6265 Remote Similarity NPD7011 Discontinued
0.6264 Remote Similarity NPD8362 Clinical (unspecified phase)
0.626 Remote Similarity NPD4814 Discontinued
0.626 Remote Similarity NPD7841 Clinical (unspecified phase)
0.6259 Remote Similarity NPD1108 Approved
0.6259 Remote Similarity NPD1107 Approved
0.6258 Remote Similarity NPD7523 Phase 3
0.6257 Remote Similarity NPD7968 Clinical (unspecified phase)

  Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data