Structure

Physi-Chem Properties

Molecular Weight:  447.22
Volume:  448.053
LogP:  4.14
LogD:  3.78
LogS:  -3.804
# Rotatable Bonds:  0
TPSA:  94.66
# H-Bond Aceptor:  7
# H-Bond Donor:  3
# Rings:  8
# Heavy Atoms:  7

MedChem Properties

QED Drug-Likeness Score:  0.579
Synthetic Accessibility Score:  6.362
Fsp3:  0.538
Lipinski Rule-of-5:  Accepted
Pfizer Rule:  Accepted
GSK Rule:  Rejected
BMS Rule:  0
Golden Triangle Rule:  Accepted
Chelating Alert:  0
PAINS Alert:  0

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

Caco-2 Permeability:  -4.964
MDCK Permeability:  1.944706673384644e-05
Pgp-inhibitor:  0.989
Pgp-substrate:  0.018
Human Intestinal Absorption (HIA):  0.503
20% Bioavailability (F20%):  0.5
30% Bioavailability (F30%):  0.907

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):  0.539
Plasma Protein Binding (PPB):  89.36385345458984%
Volume Distribution (VD):  1.005
Pgp-substrate:  6.007584095001221%

ADMET: Metabolism

CYP1A2-inhibitor:  0.095
CYP1A2-substrate:  0.516
CYP2C19-inhibitor:  0.604
CYP2C19-substrate:  0.829
CYP2C9-inhibitor:  0.892
CYP2C9-substrate:  0.47
CYP2D6-inhibitor:  0.679
CYP2D6-substrate:  0.194
CYP3A4-inhibitor:  0.949
CYP3A4-substrate:  0.916

ADMET: Excretion

Clearance (CL):  7.573
Half-life (T1/2):  0.129

ADMET: Toxicity

hERG Blockers:  0.1
Human Hepatotoxicity (H-HT):  0.97
Drug-inuced Liver Injury (DILI):  0.949
AMES Toxicity:  0.205
Rat Oral Acute Toxicity:  0.997
Maximum Recommended Daily Dose:  0.988
Skin Sensitization:  0.704
Carcinogencity:  0.966
Eye Corrosion:  0.003
Eye Irritation:  0.007
Respiratory Toxicity:  0.969

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs  

  Natural Product: NPC189079

Natural Product ID:  NPC189079
Common Name*:   Notoamide R
IUPAC Name:   n.a.
Synonyms:   Notoamide R
Standard InCHIKey:  BKNDRWLBSMZASB-MRNHWPAESA-N
Standard InCHI:  InChI=1S/C26H29N3O4/c1-23(2)10-8-13-15(33-23)7-6-14-17-19(27-18(13)14)24(3,4)16-12-25-9-5-11-29(25)22(32)26(16,20(17)30)28-21(25)31/h6-8,10,16,20,27,30H,5,9,11-12H2,1-4H3,(H,28,31)/t16-,20-,25-,26+/m0/s1
SMILES:  CC1(C)C=Cc2c(ccc3c4c(C(C)(C)[C@@H]5C[C@@]67CCCN7C(=O)[C@@]5([C@H]4O)N=C6O)[nH]c23)O1
Synthetic Gene Cluster:   n.a.
ChEMBL Identifier:   CHEMBL2042023
PubChem CID:   46919488
Chemical Classification**:  
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0000002] Organoheterocyclic compounds
      • [CHEMONTID:0001253] Quinolines and derivatives
        • [CHEMONTID:0001734] Pyrroloquinolines

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO21005 Baphia nitida Species Fabaceae Eukaryota n.a. n.a. n.a. DOI[10.1016/0031-9422(92)80059-N]
NPO20931 Simaba multiflora Species Simaroubaceae Eukaryota n.a. xylem n.a. DOI[10.1016/S0040-4039(00)86970-1]
NPO4343 Guanomyces polythrix Species n.a. Eukaryota n.a. n.a. n.a. PMID[10869195]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota rhizosphere Sonoran desert n.a. PMID[15620238]
NPO17256 Kobresia nepalensis Species Cyperaceae Eukaryota n.a. stem n.a. PMID[16508191]
NPO20931 Simaba multiflora Species Simaroubaceae Eukaryota n.a. n.a. n.a. PMID[17340534]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[17542490]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[17564467]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[19053517]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[21366228]
NPO19192 Sinocalamus affinis Species n.a. n.a. skin-removed stems Pingle Town, Sichuang Province, China 2008-AUG PMID[21469695]
NPO19192 Sinocalamus affinis Species n.a. n.a. n.a. stem n.a. PMID[21469695]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[21718031]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[21854017]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota healthy leaf of Ginkgo biloba campus of Nanjing University, Nanjing, China 2008-OCT PMID[22196792]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota isolated from the sponge Xestospongia testudinaria n.a. n.a. PMID[22225637]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota Isolated from a sandy-loam soil sample 50 m inland from Waikiki Beach, Honolulu, Hawaii 2010-JUL PMID[22400916]
NPO19192 Sinocalamus affinis Species n.a. n.a. n.a. n.a. n.a. PMID[22690646]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[22703109]
NPO19901 Emilia sonchifolia Species Asteraceae Eukaryota n.a. aerial part n.a. PMID[23397723]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[23527875]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[24050204]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[25001296]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[25581396]
NPO20739 Jungermannia hyalina Species Jungermanniaceae Eukaryota n.a. Guangxi Zhuang Autonomous Region, China n.a. PMID[25856683]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[26273902]
NPO21618 Ircinia oros Species Irciniidae Eukaryota n.a. n.a. n.a. PMID[28840725]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[31012585]
NPO21679 Nuphar lutea Species Nymphaeaceae Eukaryota n.a. n.a. n.a. PMID[31182315]
NPO20212 Callistemon viminalis Species Myrtaceae Eukaryota n.a. n.a. n.a. PMID[31276403]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[33305943]
NPO20931 Simaba multiflora Species Simaroubaceae Eukaryota Fruits n.a. n.a. PMID[3760884]
NPO20931 Simaba multiflora Species Simaroubaceae Eukaryota n.a. n.a. n.a. PMID[6736970]
NPO20931 Simaba multiflora Species Simaroubaceae Eukaryota n.a. n.a. n.a. PMID[6875576]
NPO20931 Simaba multiflora Species Simaroubaceae Eukaryota n.a. n.a. n.a. PMID[6875577]
NPO20931 Simaba multiflora Species Simaroubaceae Eukaryota n.a. xylem n.a. PMID[6875577]
NPO20671 Selliguea feei Species Polypodiaceae Eukaryota Rhizomes n.a. n.a. PMID[8254348]
NPO21679 Nuphar lutea Species Nymphaeaceae Eukaryota n.a. n.a. Database[FooDB]
NPO19901 Emilia sonchifolia Species Asteraceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO8650.1 Perilla frutescens var. arguta Varieties Lamiaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO19488 Trifolium subterraneum Species Fabaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO19017 Prangos pabularia Species Apiaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO19017 Prangos pabularia Species Apiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO11966 Euphorbia kamerunica Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO8678 Trillium camschatcense Species Melanthiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO19488 Trifolium subterraneum Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO19901 Emilia sonchifolia Species Asteraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO17256 Kobresia nepalensis Species Cyperaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO21679 Nuphar lutea Species Nymphaeaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO8650.1 Perilla frutescens var. arguta Varieties Lamiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO19017 Prangos pabularia Species Apiaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO19901 Emilia sonchifolia Species Asteraceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO3777 Stevia chamaedrys Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20546 Cissus pallidiflorus Species Vitaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21679 Nuphar lutea Species Nymphaeaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17515 Pronephrium triphyllum Species Thelypteridaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19986 Crataegus davisii Species Rosaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21289 Teucrium oxylepis Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11622.1 Shuteria involucrata var. vestita Varieties Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21618 Ircinia oros Species Irciniidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8650.1 Perilla frutescens var. arguta Varieties Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO16907 Pentzia incana Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19017 Prangos pabularia Species Apiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO4343 Guanomyces polythrix Species n.a. Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20051 Gardenia collinsae Species Rubiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO14136 Acherontia atropus Species Sphingidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO3237 Mytilus edulis Species Mytilidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO16454 Crinum erubescens Species Amaryllidaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18620 Grindelia acutifolia Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15216 Encephalartos altensteinii Species Zamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO16044 Cupressus lawsoniana Species Cupressaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20612 Ursinia abrotanifolia Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO14330 Agave aurea Species Asparagaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11966 Euphorbia kamerunica Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20212 Callistemon viminalis Species Myrtaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19488 Trifolium subterraneum Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19773 Xenorhabdus bovienii Species Morganellaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO13260 Eria foetida Species Orchidaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21550 Achillea macrophylla Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21005 Baphia nitida Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20739 Jungermannia hyalina Species Jungermanniaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20340 Pausinystalia mayumbensis Species Rubiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8678 Trillium camschatcense Species Melanthiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20872 Melampodium heterophyllum Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17256 Kobresia nepalensis Species Cyperaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21426 Alstroemeria revoluta Species Alstroemeriaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20408 Ajuga spectabilis Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO14466 Penicillium olsonii Species Aspergillaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO22510 Eupatorium havanense Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21231 Astragalus tragacantha Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18096 Excoecaria oppositifolia Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21486 Marrubium alysson Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26840 Litsea aciculata Species Lauraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19622 Euphorbia marginata Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19901 Emilia sonchifolia Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20931 Simaba multiflora Species Simaroubaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20671 Selliguea feei Species Polypodiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21088 Litsea pulchella Species Lauraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19192 Sinocalamus affinis Species n.a. n.a. n.a. n.a. n.a. Database[UNPD]
NPO21365 Ligularia muliensis Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20813 Myrmica sabuleti Species Formicidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO2854 Gymnosporia senegalensis Species Celastraceae Eukaryota n.a. n.a. n.a. Database[UNPD]

☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  NP Quantity Composition/Concentration

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference

☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT20 Organism Candida albicans Candida albicans MIC > 200000.0 nM PMID[523949]
NPT20 Organism Candida albicans Candida albicans IC50 = 97300.0 nM PMID[523949]

☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

  Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC189079 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9865 High Similarity NPC133609
0.9327 High Similarity NPC131486
0.9095 High Similarity NPC244543
0.8419 Intermediate Similarity NPC470784
0.8263 Intermediate Similarity NPC470785
0.8238 Intermediate Similarity NPC303658
0.822 Intermediate Similarity NPC184680
0.8023 Intermediate Similarity NPC260909
0.8 Intermediate Similarity NPC194740
0.7958 Intermediate Similarity NPC474183
0.7957 Intermediate Similarity NPC305984
0.7938 Intermediate Similarity NPC195788
0.7938 Intermediate Similarity NPC237901
0.7773 Intermediate Similarity NPC476651
0.7768 Intermediate Similarity NPC469594
0.7749 Intermediate Similarity NPC469592
0.7749 Intermediate Similarity NPC471080
0.7735 Intermediate Similarity NPC37957
0.7695 Intermediate Similarity NPC6786
0.7669 Intermediate Similarity NPC477532
0.7635 Intermediate Similarity NPC477531
0.7633 Intermediate Similarity NPC475816
0.7627 Intermediate Similarity NPC128115
0.7627 Intermediate Similarity NPC477533
0.7625 Intermediate Similarity NPC252251
0.7619 Intermediate Similarity NPC478080
0.7607 Intermediate Similarity NPC148183
0.7607 Intermediate Similarity NPC152768
0.7598 Intermediate Similarity NPC476106
0.7595 Intermediate Similarity NPC198503
0.7593 Intermediate Similarity NPC209174
0.7585 Intermediate Similarity NPC153923
0.7581 Intermediate Similarity NPC81939
0.7576 Intermediate Similarity NPC209769
0.7573 Intermediate Similarity NPC21638
0.7572 Intermediate Similarity NPC473105
0.7562 Intermediate Similarity NPC475253
0.755 Intermediate Similarity NPC475666
0.7542 Intermediate Similarity NPC473041
0.7532 Intermediate Similarity NPC470931
0.751 Intermediate Similarity NPC473185
0.751 Intermediate Similarity NPC473187
0.75 Intermediate Similarity NPC473449
0.7479 Intermediate Similarity NPC48353
0.7479 Intermediate Similarity NPC150239
0.7478 Intermediate Similarity NPC470930
0.7469 Intermediate Similarity NPC202503
0.7467 Intermediate Similarity NPC475085
0.7467 Intermediate Similarity NPC291535
0.7467 Intermediate Similarity NPC475112
0.7459 Intermediate Similarity NPC474192
0.7459 Intermediate Similarity NPC475720
0.7457 Intermediate Similarity NPC205926
0.7452 Intermediate Similarity NPC471303
0.7431 Intermediate Similarity NPC473188
0.7425 Intermediate Similarity NPC469589
0.7425 Intermediate Similarity NPC201697
0.7424 Intermediate Similarity NPC267423
0.741 Intermediate Similarity NPC469734
0.7407 Intermediate Similarity NPC471762
0.7407 Intermediate Similarity NPC311906
0.7404 Intermediate Similarity NPC264176
0.7398 Intermediate Similarity NPC277351
0.7395 Intermediate Similarity NPC247803
0.7393 Intermediate Similarity NPC284685
0.7384 Intermediate Similarity NPC330009
0.7382 Intermediate Similarity NPC475910
0.7368 Intermediate Similarity NPC72211
0.7364 Intermediate Similarity NPC219397
0.7364 Intermediate Similarity NPC473179
0.7362 Intermediate Similarity NPC67401
0.736 Intermediate Similarity NPC473540
0.7359 Intermediate Similarity NPC162484
0.7356 Intermediate Similarity NPC315467
0.7347 Intermediate Similarity NPC14288
0.7333 Intermediate Similarity NPC174760
0.7322 Intermediate Similarity NPC96321
0.7312 Intermediate Similarity NPC17437
0.7304 Intermediate Similarity NPC11017
0.7297 Intermediate Similarity NPC89549
0.7281 Intermediate Similarity NPC70259
0.7269 Intermediate Similarity NPC473183
0.7265 Intermediate Similarity NPC100547
0.7265 Intermediate Similarity NPC193777
0.7265 Intermediate Similarity NPC66777
0.7262 Intermediate Similarity NPC478009
0.7262 Intermediate Similarity NPC478010
0.7261 Intermediate Similarity NPC132642
0.7257 Intermediate Similarity NPC308137
0.7257 Intermediate Similarity NPC310211
0.7254 Intermediate Similarity NPC319232
0.7254 Intermediate Similarity NPC24370
0.7252 Intermediate Similarity NPC88923
0.7252 Intermediate Similarity NPC100734
0.7252 Intermediate Similarity NPC315634
0.7251 Intermediate Similarity NPC477066
0.725 Intermediate Similarity NPC46561
0.7249 Intermediate Similarity NPC243834
0.7249 Intermediate Similarity NPC70956
0.7246 Intermediate Similarity NPC471304
0.7246 Intermediate Similarity NPC234999
0.7246 Intermediate Similarity NPC11464
0.7237 Intermediate Similarity NPC329982
0.7237 Intermediate Similarity NPC43787
0.7237 Intermediate Similarity NPC205934
0.7236 Intermediate Similarity NPC95240
0.7236 Intermediate Similarity NPC322135
0.7236 Intermediate Similarity NPC223409
0.7233 Intermediate Similarity NPC78609
0.7231 Intermediate Similarity NPC60621
0.7231 Intermediate Similarity NPC280799
0.7229 Intermediate Similarity NPC67904
0.7229 Intermediate Similarity NPC329747
0.7227 Intermediate Similarity NPC478074
0.7224 Intermediate Similarity NPC124920
0.7224 Intermediate Similarity NPC304307
0.7224 Intermediate Similarity NPC34580
0.7224 Intermediate Similarity NPC118559
0.7224 Intermediate Similarity NPC261251
0.7222 Intermediate Similarity NPC477067
0.7222 Intermediate Similarity NPC478081
0.7222 Intermediate Similarity NPC478082
0.7215 Intermediate Similarity NPC87413
0.7213 Intermediate Similarity NPC179287
0.7208 Intermediate Similarity NPC314552
0.7208 Intermediate Similarity NPC169402
0.7198 Intermediate Similarity NPC476044
0.7189 Intermediate Similarity NPC39370
0.7189 Intermediate Similarity NPC473184
0.7185 Intermediate Similarity NPC472098
0.7185 Intermediate Similarity NPC475778
0.7184 Intermediate Similarity NPC214142
0.7183 Intermediate Similarity NPC475844
0.7177 Intermediate Similarity NPC473186
0.7177 Intermediate Similarity NPC54803
0.7177 Intermediate Similarity NPC321592
0.7167 Intermediate Similarity NPC469928
0.7167 Intermediate Similarity NPC295898
0.7166 Intermediate Similarity NPC326363
0.7154 Intermediate Similarity NPC470126
0.7154 Intermediate Similarity NPC157931
0.7149 Intermediate Similarity NPC222046
0.7149 Intermediate Similarity NPC288110
0.7149 Intermediate Similarity NPC473182
0.7148 Intermediate Similarity NPC63971
0.7148 Intermediate Similarity NPC91868
0.7143 Intermediate Similarity NPC306376
0.7143 Intermediate Similarity NPC49583
0.7143 Intermediate Similarity NPC23294
0.7143 Intermediate Similarity NPC303374
0.7126 Intermediate Similarity NPC274640
0.7125 Intermediate Similarity NPC116238
0.7121 Intermediate Similarity NPC26543
0.7119 Intermediate Similarity NPC10653
0.7119 Intermediate Similarity NPC318525
0.7119 Intermediate Similarity NPC472099
0.7119 Intermediate Similarity NPC249583
0.7115 Intermediate Similarity NPC478083
0.7103 Intermediate Similarity NPC82472
0.7101 Intermediate Similarity NPC303951
0.71 Intermediate Similarity NPC314176
0.7099 Intermediate Similarity NPC191489
0.7095 Intermediate Similarity NPC3207
0.7095 Intermediate Similarity NPC183407
0.7083 Intermediate Similarity NPC316181
0.7083 Intermediate Similarity NPC74562
0.7083 Intermediate Similarity NPC151781
0.7082 Intermediate Similarity NPC79129
0.7082 Intermediate Similarity NPC249150
0.7082 Intermediate Similarity NPC49196
0.7082 Intermediate Similarity NPC195461
0.7082 Intermediate Similarity NPC313985
0.7082 Intermediate Similarity NPC81654
0.708 Intermediate Similarity NPC323198
0.708 Intermediate Similarity NPC284888
0.708 Intermediate Similarity NPC323752
0.7078 Intermediate Similarity NPC208084
0.7076 Intermediate Similarity NPC277350
0.7068 Intermediate Similarity NPC474688
0.7063 Intermediate Similarity NPC478012
0.7063 Intermediate Similarity NPC478011
0.7061 Intermediate Similarity NPC280272
0.7061 Intermediate Similarity NPC478006
0.7052 Intermediate Similarity NPC325976
0.7052 Intermediate Similarity NPC245055
0.7052 Intermediate Similarity NPC33064
0.705 Intermediate Similarity NPC472589
0.7046 Intermediate Similarity NPC4687
0.7042 Intermediate Similarity NPC127996
0.7042 Intermediate Similarity NPC94157
0.7042 Intermediate Similarity NPC159815
0.704 Intermediate Similarity NPC132329
0.7038 Intermediate Similarity NPC314882
0.7038 Intermediate Similarity NPC472588
0.7034 Intermediate Similarity NPC285558
0.7027 Intermediate Similarity NPC14812
0.7025 Intermediate Similarity NPC170114
0.7017 Intermediate Similarity NPC86834
0.7017 Intermediate Similarity NPC39679
0.7017 Intermediate Similarity NPC210828

  Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC189079 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8023 Intermediate Similarity NPD8459 Approved
0.8023 Intermediate Similarity NPD8460 Approved
0.7938 Intermediate Similarity NPD8466 Approved
0.7938 Intermediate Similarity NPD8467 Approved
0.7938 Intermediate Similarity NPD8465 Approved
0.7913 Intermediate Similarity NPD8363 Approved
0.7913 Intermediate Similarity NPD8364 Approved
0.7868 Intermediate Similarity NPD8429 Approved
0.7868 Intermediate Similarity NPD8427 Approved
0.7868 Intermediate Similarity NPD8428 Approved
0.7852 Intermediate Similarity NPD8365 Clinical (unspecified phase)
0.7816 Intermediate Similarity NPD8426 Approved
0.7816 Intermediate Similarity NPD8425 Approved
0.7787 Intermediate Similarity NPD6824 Clinical (unspecified phase)
0.7561 Intermediate Similarity NPD7025 Clinical (unspecified phase)
0.7532 Intermediate Similarity NPD2916 Discontinued
0.7531 Intermediate Similarity NPD4885 Approved
0.75 Intermediate Similarity NPD8489 Phase 1
0.75 Intermediate Similarity NPD6503 Clinical (unspecified phase)
0.749 Intermediate Similarity NPD8016 Phase 3
0.749 Intermediate Similarity NPD8017 Clinical (unspecified phase)
0.7469 Intermediate Similarity NPD7426 Phase 1
0.7449 Intermediate Similarity NPD7589 Clinical (unspecified phase)
0.7393 Intermediate Similarity NPD7956 Approved
0.7393 Intermediate Similarity NPD7955 Approved
0.7371 Intermediate Similarity NPD3003 Approved
0.7364 Intermediate Similarity NPD7194 Discontinued
0.7358 Intermediate Similarity NPD7558 Phase 2
0.7312 Intermediate Similarity NPD8358 Approved
0.7308 Intermediate Similarity NPD6376 Discontinued
0.7291 Intermediate Similarity NPD6716 Phase 1
0.728 Intermediate Similarity NPD2921 Clinical (unspecified phase)
0.7269 Intermediate Similarity NPD5902 Approved
0.7269 Intermediate Similarity NPD5903 Approved
0.7252 Intermediate Similarity NPD7803 Approved
0.7251 Intermediate Similarity NPD6790 Phase 1
0.725 Intermediate Similarity NPD5632 Approved
0.7231 Intermediate Similarity NPD5507 Approved
0.7231 Intermediate Similarity NPD5506 Approved
0.7224 Intermediate Similarity NPD6773 Clinical (unspecified phase)
0.7208 Intermediate Similarity NPD5164 Discontinued
0.7205 Intermediate Similarity NPD8359 Phase 2
0.7205 Intermediate Similarity NPD5488 Discontinued
0.7188 Intermediate Similarity NPD5482 Discontinued
0.7186 Intermediate Similarity NPD1768 Approved
0.7181 Intermediate Similarity NPD8255 Phase 2
0.7166 Intermediate Similarity NPD5479 Discontinued
0.7161 Intermediate Similarity NPD5658 Approved
0.7154 Intermediate Similarity NPD6517 Phase 3
0.7148 Intermediate Similarity NPD6456 Discontinued
0.7125 Intermediate Similarity NPD4897 Phase 2
0.7119 Intermediate Similarity NPD7222 Phase 2
0.7114 Intermediate Similarity NPD3263 Phase 3
0.7108 Intermediate Similarity NPD7797 Approved
0.7108 Intermediate Similarity NPD7796 Approved
0.7106 Intermediate Similarity NPD3946 Clinical (unspecified phase)
0.7099 Intermediate Similarity NPD7708 Approved
0.7085 Intermediate Similarity NPD7268 Clinical (unspecified phase)
0.7085 Intermediate Similarity NPD7181 Phase 3
0.7082 Intermediate Similarity NPD4601 Approved
0.7082 Intermediate Similarity NPD4600 Approved
0.708 Intermediate Similarity NPD4373 Phase 2
0.7071 Intermediate Similarity NPD6567 Clinical (unspecified phase)
0.7066 Intermediate Similarity NPD7823 Clinical (unspecified phase)
0.7061 Intermediate Similarity NPD6995 Phase 1
0.7056 Intermediate Similarity NPD7710 Clinical (unspecified phase)
0.7046 Intermediate Similarity NPD5429 Discontinued
0.7042 Intermediate Similarity NPD7069 Discontinued
0.7037 Intermediate Similarity NPD6985 Discontinued
0.7037 Intermediate Similarity NPD6568 Discontinued
0.7037 Intermediate Similarity NPD7395 Discontinued
0.7037 Intermediate Similarity NPD8405 Clinical (unspecified phase)
0.7036 Intermediate Similarity NPD8524 Approved
0.7031 Intermediate Similarity NPD5483 Clinical (unspecified phase)
0.7029 Intermediate Similarity NPD4900 Clinical (unspecified phase)
0.7028 Intermediate Similarity NPD4952 Phase 3
0.7012 Intermediate Similarity NPD6741 Clinical (unspecified phase)
0.7004 Intermediate Similarity NPD4901 Clinical (unspecified phase)
0.7 Intermediate Similarity NPD7284 Clinical (unspecified phase)
0.6992 Remote Similarity NPD6160 Clinical (unspecified phase)
0.6988 Remote Similarity NPD6525 Clinical (unspecified phase)
0.6988 Remote Similarity NPD5559 Phase 2
0.6987 Remote Similarity NPD2564 Approved
0.6987 Remote Similarity NPD2565 Phase 2
0.698 Remote Similarity NPD7417 Discontinued
0.6976 Remote Similarity NPD7603 Discontinued
0.6975 Remote Similarity NPD1392 Approved
0.6973 Remote Similarity NPD8463 Approved
0.6966 Remote Similarity NPD4118 Clinical (unspecified phase)
0.6963 Remote Similarity NPD7682 Approved
0.6963 Remote Similarity NPD7684 Approved
0.6955 Remote Similarity NPD8279 Clinical (unspecified phase)
0.694 Remote Similarity NPD7393 Clinical (unspecified phase)
0.694 Remote Similarity NPD6861 Clinical (unspecified phase)
0.6935 Remote Similarity NPD6247 Clinical (unspecified phase)
0.6935 Remote Similarity NPD7859 Phase 2
0.6929 Remote Similarity NPD4502 Phase 2
0.6929 Remote Similarity NPD5450 Discontinued
0.692 Remote Similarity NPD2920 Discontinued
0.6914 Remote Similarity NPD5417 Clinical (unspecified phase)
0.6914 Remote Similarity NPD5293 Phase 2
0.691 Remote Similarity NPD5512 Phase 3
0.6906 Remote Similarity NPD6531 Approved
0.6906 Remote Similarity NPD6530 Approved
0.6905 Remote Similarity NPD3746 Discontinued
0.6904 Remote Similarity NPD7453 Approved
0.6904 Remote Similarity NPD7452 Approved
0.6882 Remote Similarity NPD8247 Approved
0.6882 Remote Similarity NPD8246 Approved
0.688 Remote Similarity NPD5003 Discontinued
0.6877 Remote Similarity NPD7925 Phase 2
0.6877 Remote Similarity NPD6494 Phase 2
0.6877 Remote Similarity NPD7924 Phase 2
0.6867 Remote Similarity NPD3925 Approved
0.6865 Remote Similarity NPD7688 Phase 1
0.6862 Remote Similarity NPD3507 Phase 2
0.6862 Remote Similarity NPD5530 Phase 1
0.686 Remote Similarity NPD6220 Phase 3
0.686 Remote Similarity NPD7470 Discontinued
0.685 Remote Similarity NPD2951 Discontinued
0.6844 Remote Similarity NPD4926 Clinical (unspecified phase)
0.6836 Remote Similarity NPD8107 Approved
0.6828 Remote Similarity NPD4203 Approved
0.6828 Remote Similarity NPD4204 Approved
0.6825 Remote Similarity NPD8108 Approved
0.6824 Remote Similarity NPD3006 Discontinued
0.6816 Remote Similarity NPD5612 Discontinued
0.6811 Remote Similarity NPD5040 Clinical (unspecified phase)
0.681 Remote Similarity NPD8525 Approved
0.6797 Remote Similarity NPD4368 Phase 2
0.6795 Remote Similarity NPD3324 Clinical (unspecified phase)
0.6794 Remote Similarity NPD3986 Discontinued
0.6792 Remote Similarity NPD7174 Clinical (unspecified phase)
0.679 Remote Similarity NPD5067 Phase 2
0.679 Remote Similarity NPD5066 Phase 2
0.6773 Remote Similarity NPD7676 Clinical (unspecified phase)
0.6773 Remote Similarity NPD7674 Phase 3
0.6773 Remote Similarity NPD7675 Phase 3
0.6767 Remote Similarity NPD8091 Phase 3
0.6767 Remote Similarity NPD8461 Discontinued
0.6756 Remote Similarity NPD8324 Phase 2
0.6751 Remote Similarity NPD5547 Clinical (unspecified phase)
0.6748 Remote Similarity NPD7690 Clinical (unspecified phase)
0.6741 Remote Similarity NPD8284 Discontinued
0.6734 Remote Similarity NPD3763 Approved
0.6723 Remote Similarity NPD4418 Discontinued
0.672 Remote Similarity NPD7219 Approved
0.672 Remote Similarity NPD7221 Approved
0.6707 Remote Similarity NPD7538 Clinical (unspecified phase)
0.6707 Remote Similarity NPD6242 Discontinued
0.6706 Remote Similarity NPD7031 Phase 1
0.6705 Remote Similarity NPD7729 Clinical (unspecified phase)
0.6696 Remote Similarity NPD5083 Clinical (unspecified phase)
0.6693 Remote Similarity NPD7853 Phase 2
0.6693 Remote Similarity NPD7824 Approved
0.6692 Remote Similarity NPD8116 Phase 3
0.6692 Remote Similarity NPD8102 Discontinued
0.6692 Remote Similarity NPD8117 Approved
0.6681 Remote Similarity NPD3837 Clinical (unspecified phase)
0.668 Remote Similarity NPD7951 Approved
0.668 Remote Similarity NPD8149 Discontinued
0.668 Remote Similarity NPD7789 Approved
0.668 Remote Similarity NPD7953 Approved
0.668 Remote Similarity NPD7950 Approved
0.668 Remote Similarity NPD7790 Approved
0.668 Remote Similarity NPD7791 Approved
0.668 Remote Similarity NPD7952 Approved
0.6667 Remote Similarity NPD4958 Clinical (unspecified phase)
0.6667 Remote Similarity NPD6961 Discontinued
0.6667 Remote Similarity NPD8244 Phase 2
0.6667 Remote Similarity NPD8101 Phase 3
0.6667 Remote Similarity NPD5913 Phase 3
0.6667 Remote Similarity NPD5912 Clinical (unspecified phase)
0.6654 Remote Similarity NPD7807 Clinical (unspecified phase)
0.6654 Remote Similarity NPD7781 Approved
0.6654 Remote Similarity NPD5014 Discontinued
0.6654 Remote Similarity NPD6963 Approved
0.6654 Remote Similarity NPD6964 Approved
0.6654 Remote Similarity NPD7780 Approved
0.6653 Remote Similarity NPD5939 Approved
0.6653 Remote Similarity NPD5936 Approved
0.6653 Remote Similarity NPD4501 Approved
0.6653 Remote Similarity NPD5416 Discontinued
0.6653 Remote Similarity NPD6491 Clinical (unspecified phase)
0.6653 Remote Similarity NPD4500 Approved
0.6653 Remote Similarity NPD8403 Phase 1
0.6641 Remote Similarity NPD7921 Approved
0.6641 Remote Similarity NPD7967 Discontinued
0.664 Remote Similarity NPD5930 Phase 3
0.664 Remote Similarity NPD7180 Phase 3
0.6639 Remote Similarity NPD5835 Phase 3
0.6639 Remote Similarity NPD5834 Phase 3
0.6628 Remote Similarity NPD6473 Phase 1
0.6627 Remote Similarity NPD5022 Discontinued
0.6627 Remote Similarity NPD4981 Phase 2
0.6627 Remote Similarity NPD7547 Clinical (unspecified phase)
0.6624 Remote Similarity NPD6550 Discontinued
0.6618 Remote Similarity NPD7689 Approved
0.6614 Remote Similarity NPD7730 Approved
0.6614 Remote Similarity NPD3259 Approved

  Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data