Structure

Physi-Chem Properties

Molecular Weight:  708.44
Volume:  752.781
LogP:  0.955
LogD:  2.013
LogS:  -4.543
# Rotatable Bonds:  1
TPSA:  208.37
# H-Bond Aceptor:  11
# H-Bond Donor:  9
# Rings:  1
# Heavy Atoms:  11

MedChem Properties

QED Drug-Likeness Score:  0.181
Synthetic Accessibility Score:  5.824
Fsp3:  0.667
Lipinski Rule-of-5:  Rejected
Pfizer Rule:  Accepted
GSK Rule:  Rejected
BMS Rule:  1
Golden Triangle Rule:  Rejected
Chelating Alert:  0
PAINS Alert:  0

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

Caco-2 Permeability:  -5.427
MDCK Permeability:  7.174939673859626e-05
Pgp-inhibitor:  0.0
Pgp-substrate:  1.0
Human Intestinal Absorption (HIA):  0.464
20% Bioavailability (F20%):  0.999
30% Bioavailability (F30%):  1.0

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):  0.079
Plasma Protein Binding (PPB):  31.363534927368164%
Volume Distribution (VD):  0.446
Pgp-substrate:  5.266349792480469%

ADMET: Metabolism

CYP1A2-inhibitor:  0.197
CYP1A2-substrate:  0.02
CYP2C19-inhibitor:  0.082
CYP2C19-substrate:  0.806
CYP2C9-inhibitor:  0.035
CYP2C9-substrate:  0.95
CYP2D6-inhibitor:  0.021
CYP2D6-substrate:  0.736
CYP3A4-inhibitor:  0.768
CYP3A4-substrate:  0.554

ADMET: Excretion

Clearance (CL):  2.649
Half-life (T1/2):  0.432

ADMET: Toxicity

hERG Blockers:  0.692
Human Hepatotoxicity (H-HT):  0.599
Drug-inuced Liver Injury (DILI):  0.0
AMES Toxicity:  0.014
Rat Oral Acute Toxicity:  0.001
Maximum Recommended Daily Dose:  1.0
Skin Sensitization:  0.984
Carcinogencity:  0.65
Eye Corrosion:  0.08
Eye Irritation:  0.159
Respiratory Toxicity:  0.987

Download Data

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Similar NPs/Drugs  

  Natural Product: NPC184208

Natural Product ID:  NPC184208
Common Name*:   Bahamaolide B
IUPAC Name:   (3E,5E,7E,9E,11E,13Z,16R,18S,20S,22S,24S,26R,28S,30S,32S,35S,36S)-16,18,20,22,24,26,28,30,32-nonahydroxy-35-methyl-36-propan-2-yl-1-oxacyclohexatriaconta-3,5,7,9,11,13-hexaen-2-one
Synonyms:   Bahamaolide B
Standard InCHIKey:  OLPMWTXTIALTJI-OIJGFXDKSA-N
Standard InCHI:  InChI=1S/C39H64O11/c1-27(2)39-28(3)17-18-30(41)20-32(43)22-34(45)24-36(47)26-37(48)25-35(46)23-33(44)21-31(42)19-29(40)15-13-11-9-7-5-4-6-8-10-12-14-16-38(49)50-39/h4-14,16,27-37,39-48H,15,17-26H2,1-3H3/b5-4+,8-6+,9-7+,12-10+,13-11-,16-14+/t28-,29+,30-,31-,32-,33-,34-,35-,36+,37+,39-/m0/s1
SMILES:  O[C@H]1CC[C@H](C)[C@@H](OC(=O)/C=C/C=C/C=C/C=C/C=C/C=CC[C@H](C[C@@H](C[C@@H](C[C@@H](C[C@H](C[C@@H](C[C@H](C[C@H](C1)O)O)O)O)O)O)O)O)C(C)C
Synthetic Gene Cluster:   n.a.
ChEMBL Identifier:   CHEMBL2047352
PubChem CID:   59052875
Chemical Classification**:  
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0000261] Phenylpropanoids and polyketides
      • [CHEMONTID:0000147] Macrolides and analogues

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10344559]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10344578]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10348041]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10604756]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10695669]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10724004]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10994816]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[11099231]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[11132958]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[11374972]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[11473415]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[14738393]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. Australian n.a. PMID[15497950]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[15813185]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[15844966]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[15974616]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[16180833]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[1666120]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[16724845]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[16830891]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[16872146]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17125235]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17315965]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17551212]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17608531]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17844998]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17887721]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17917237]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18044841]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18081255]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. Indonesian n.a. PMID[18081255]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18205372]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18327911]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. Northwest Territories, Canada 1995 PMID[18327911]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18666798]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18776684]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[19007176]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[19129624]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[19191549]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[19856955]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[19883065]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[20092333]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[20545334]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[20836523]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21028889]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21028891]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. mycelium n.a. PMID[21090727]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21314175]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. mycelium n.a. PMID[21639131]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21728289]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. latex n.a. PMID[21751787]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21807523]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21873059]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. latex n.a. PMID[21879726]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. mycelium n.a. PMID[22145663]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[22574670]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[22583058]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[22591466]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[22758660]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[22775474]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[23387796]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[23662937]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[24592993]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[24754815]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[24878306]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[24964393]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25211234]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25455147]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25495422]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25537064]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25918793]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25934225]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[26035239]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[26465675]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[26798949]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[26905826]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[31013087]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[31298537]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[31894983]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[32298122]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[8501018]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. mycelium n.a. PMID[8784423]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[8931733]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[8982334]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9031666]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9031676]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9066767]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9066768]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9186568]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9531983]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. mycelium n.a. PMID[9711246]

☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  NP Quantity Composition/Concentration

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference

☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT2 Others Unspecified IC50 = 127000.0 nM PMID[473689]

☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

  Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC184208 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC8538
0.9737 High Similarity NPC315731
0.9221 High Similarity NPC139712
0.9079 High Similarity NPC469880
0.9024 High Similarity NPC199382
0.8933 High Similarity NPC329914
0.8824 High Similarity NPC114172
0.8824 High Similarity NPC471324
0.8824 High Similarity NPC206679
0.8824 High Similarity NPC476084
0.8824 High Similarity NPC476075
0.8721 High Similarity NPC159092
0.8721 High Similarity NPC109406
0.8718 High Similarity NPC477203
0.8701 High Similarity NPC285840
0.8701 High Similarity NPC327041
0.8684 High Similarity NPC329890
0.8667 High Similarity NPC476012
0.859 High Similarity NPC188860
0.859 High Similarity NPC477202
0.8571 High Similarity NPC316138
0.8571 High Similarity NPC313658
0.8523 High Similarity NPC300710
0.8481 Intermediate Similarity NPC233071
0.8452 Intermediate Similarity NPC61527
0.8442 Intermediate Similarity NPC185186
0.8442 Intermediate Similarity NPC327383
0.8442 Intermediate Similarity NPC477085
0.8427 Intermediate Similarity NPC255410
0.8427 Intermediate Similarity NPC288350
0.8427 Intermediate Similarity NPC173329
0.8421 Intermediate Similarity NPC476037
0.8333 Intermediate Similarity NPC475332
0.8333 Intermediate Similarity NPC120299
0.8312 Intermediate Similarity NPC316185
0.8312 Intermediate Similarity NPC477087
0.8312 Intermediate Similarity NPC477086
0.8289 Intermediate Similarity NPC101622
0.8276 Intermediate Similarity NPC177668
0.825 Intermediate Similarity NPC84360
0.8242 Intermediate Similarity NPC475653
0.8235 Intermediate Similarity NPC47220
0.8235 Intermediate Similarity NPC186332
0.8214 Intermediate Similarity NPC160517
0.8214 Intermediate Similarity NPC78673
0.8214 Intermediate Similarity NPC186155
0.8182 Intermediate Similarity NPC4299
0.8171 Intermediate Similarity NPC470147
0.8171 Intermediate Similarity NPC133226
0.8161 Intermediate Similarity NPC133450
0.814 Intermediate Similarity NPC477959
0.8118 Intermediate Similarity NPC471494
0.8101 Intermediate Similarity NPC477204
0.8101 Intermediate Similarity NPC107654
0.8101 Intermediate Similarity NPC315843
0.809 Intermediate Similarity NPC472195
0.809 Intermediate Similarity NPC472196
0.809 Intermediate Similarity NPC238090
0.8068 Intermediate Similarity NPC3952
0.8065 Intermediate Similarity NPC475157
0.8065 Intermediate Similarity NPC2313
0.8065 Intermediate Similarity NPC57586
0.8065 Intermediate Similarity NPC471637
0.8065 Intermediate Similarity NPC154132
0.8065 Intermediate Similarity NPC475655
0.8049 Intermediate Similarity NPC470149
0.8049 Intermediate Similarity NPC470148
0.8049 Intermediate Similarity NPC477088
0.8049 Intermediate Similarity NPC55304
0.8049 Intermediate Similarity NPC1180
0.8049 Intermediate Similarity NPC471537
0.8049 Intermediate Similarity NPC226226
0.8049 Intermediate Similarity NPC180725
0.8043 Intermediate Similarity NPC203627
0.8043 Intermediate Similarity NPC161855
0.8025 Intermediate Similarity NPC474026
0.8023 Intermediate Similarity NPC164393
0.8022 Intermediate Similarity NPC473291
0.8 Intermediate Similarity NPC469491
0.8 Intermediate Similarity NPC256368
0.8 Intermediate Similarity NPC159698
0.7979 Intermediate Similarity NPC473596
0.7927 Intermediate Similarity NPC248775
0.7907 Intermediate Similarity NPC242233
0.7895 Intermediate Similarity NPC197736
0.7895 Intermediate Similarity NPC146811
0.7889 Intermediate Similarity NPC476049
0.7882 Intermediate Similarity NPC16488
0.7865 Intermediate Similarity NPC313670
0.7857 Intermediate Similarity NPC112868
0.7857 Intermediate Similarity NPC474894
0.7848 Intermediate Similarity NPC477084
0.7831 Intermediate Similarity NPC86971
0.7816 Intermediate Similarity NPC122502
0.7816 Intermediate Similarity NPC208473
0.7816 Intermediate Similarity NPC316426
0.7816 Intermediate Similarity NPC311163
0.7816 Intermediate Similarity NPC315395
0.7805 Intermediate Similarity NPC315394
0.7765 Intermediate Similarity NPC10080
0.7765 Intermediate Similarity NPC123908
0.7732 Intermediate Similarity NPC315070
0.7727 Intermediate Similarity NPC86005
0.7722 Intermediate Similarity NPC329904
0.7722 Intermediate Similarity NPC469660
0.7722 Intermediate Similarity NPC473361
0.7717 Intermediate Similarity NPC272050
0.7674 Intermediate Similarity NPC170377
0.7674 Intermediate Similarity NPC474809
0.7674 Intermediate Similarity NPC116543
0.7667 Intermediate Similarity NPC475855
0.7667 Intermediate Similarity NPC473448
0.766 Intermediate Similarity NPC65700
0.7653 Intermediate Similarity NPC109376
0.7647 Intermediate Similarity NPC475944
0.764 Intermediate Similarity NPC260343
0.7634 Intermediate Similarity NPC472995
0.7625 Intermediate Similarity NPC293114
0.7625 Intermediate Similarity NPC475762
0.7625 Intermediate Similarity NPC472254
0.7609 Intermediate Similarity NPC474247
0.7595 Intermediate Similarity NPC269841
0.7595 Intermediate Similarity NPC151481
0.7595 Intermediate Similarity NPC475004
0.759 Intermediate Similarity NPC475711
0.7586 Intermediate Similarity NPC266718
0.7586 Intermediate Similarity NPC473308
0.7582 Intermediate Similarity NPC158061
0.7579 Intermediate Similarity NPC475053
0.7576 Intermediate Similarity NPC470024
0.7576 Intermediate Similarity NPC224660
0.7564 Intermediate Similarity NPC472266
0.7561 Intermediate Similarity NPC260396
0.7558 Intermediate Similarity NPC251026
0.7558 Intermediate Similarity NPC224455
0.7556 Intermediate Similarity NPC295312
0.7556 Intermediate Similarity NPC212598
0.7553 Intermediate Similarity NPC40812
0.7551 Intermediate Similarity NPC172867
0.7531 Intermediate Similarity NPC284006
0.7529 Intermediate Similarity NPC474510
0.7528 Intermediate Similarity NPC160138
0.7527 Intermediate Similarity NPC36954
0.7527 Intermediate Similarity NPC304886
0.75 Intermediate Similarity NPC209135
0.75 Intermediate Similarity NPC162615
0.75 Intermediate Similarity NPC205034
0.75 Intermediate Similarity NPC182292
0.75 Intermediate Similarity NPC228451
0.75 Intermediate Similarity NPC474816
0.75 Intermediate Similarity NPC152778
0.75 Intermediate Similarity NPC99395
0.75 Intermediate Similarity NPC137033
0.75 Intermediate Similarity NPC133625
0.75 Intermediate Similarity NPC197903
0.75 Intermediate Similarity NPC475838
0.75 Intermediate Similarity NPC476300
0.75 Intermediate Similarity NPC11804
0.75 Intermediate Similarity NPC125674
0.7474 Intermediate Similarity NPC255592
0.7474 Intermediate Similarity NPC261377
0.7474 Intermediate Similarity NPC308567
0.7473 Intermediate Similarity NPC478003
0.7473 Intermediate Similarity NPC158388
0.7473 Intermediate Similarity NPC179394
0.7473 Intermediate Similarity NPC474761
0.7473 Intermediate Similarity NPC144133
0.7473 Intermediate Similarity NPC478004
0.7473 Intermediate Similarity NPC476004
0.7471 Intermediate Similarity NPC161045
0.7471 Intermediate Similarity NPC2379
0.7471 Intermediate Similarity NPC231601
0.7471 Intermediate Similarity NPC31019
0.7471 Intermediate Similarity NPC263087
0.7471 Intermediate Similarity NPC142111
0.7471 Intermediate Similarity NPC106912
0.7471 Intermediate Similarity NPC11620
0.7471 Intermediate Similarity NPC473315
0.7471 Intermediate Similarity NPC250315
0.7471 Intermediate Similarity NPC27314
0.7471 Intermediate Similarity NPC44261
0.747 Intermediate Similarity NPC301525
0.7468 Intermediate Similarity NPC474823
0.7447 Intermediate Similarity NPC230800
0.7447 Intermediate Similarity NPC472996
0.7447 Intermediate Similarity NPC476315
0.7447 Intermediate Similarity NPC16967
0.7447 Intermediate Similarity NPC279621
0.7447 Intermediate Similarity NPC472997
0.7444 Intermediate Similarity NPC48338
0.7444 Intermediate Similarity NPC40376
0.7444 Intermediate Similarity NPC474471
0.7444 Intermediate Similarity NPC21208
0.7444 Intermediate Similarity NPC280621
0.7444 Intermediate Similarity NPC233551
0.7444 Intermediate Similarity NPC20339
0.7444 Intermediate Similarity NPC227379
0.7442 Intermediate Similarity NPC469469
0.7439 Intermediate Similarity NPC470686
0.7426 Intermediate Similarity NPC316708

  Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC184208 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8929 High Similarity NPD7838 Discovery
0.8043 Intermediate Similarity NPD8029 Clinical (unspecified phase)
0.7865 Intermediate Similarity NPD6698 Approved
0.7865 Intermediate Similarity NPD46 Approved
0.7778 Intermediate Similarity NPD7983 Approved
0.7396 Intermediate Similarity NPD6648 Approved
0.732 Intermediate Similarity NPD5344 Discontinued
0.7263 Intermediate Similarity NPD7839 Suspended
0.7143 Intermediate Similarity NPD4250 Approved
0.7143 Intermediate Similarity NPD4251 Approved
0.7128 Intermediate Similarity NPD5779 Approved
0.7128 Intermediate Similarity NPD5778 Approved
0.7126 Intermediate Similarity NPD5790 Clinical (unspecified phase)
0.7097 Intermediate Similarity NPD5785 Approved
0.7089 Intermediate Similarity NPD2685 Clinical (unspecified phase)
0.7079 Intermediate Similarity NPD7154 Phase 3
0.7033 Intermediate Similarity NPD4249 Approved
0.7021 Intermediate Similarity NPD7637 Suspended
0.7 Intermediate Similarity NPD6400 Clinical (unspecified phase)
0.6961 Remote Similarity NPD7899 Clinical (unspecified phase)
0.6932 Remote Similarity NPD4821 Approved
0.6932 Remote Similarity NPD4820 Approved
0.6932 Remote Similarity NPD4822 Approved
0.6932 Remote Similarity NPD4819 Approved
0.6923 Remote Similarity NPD5363 Approved
0.6897 Remote Similarity NPD4268 Approved
0.6897 Remote Similarity NPD4271 Approved
0.6778 Remote Similarity NPD5209 Approved
0.6768 Remote Similarity NPD7638 Approved
0.6744 Remote Similarity NPD8039 Approved
0.6739 Remote Similarity NPD6082 Clinical (unspecified phase)
0.6731 Remote Similarity NPD6686 Approved
0.6707 Remote Similarity NPD4247 Clinical (unspecified phase)
0.6703 Remote Similarity NPD5362 Discontinued
0.67 Remote Similarity NPD7640 Approved
0.67 Remote Similarity NPD7639 Approved
0.6637 Remote Similarity NPD7829 Approved
0.6637 Remote Similarity NPD7830 Approved
0.6633 Remote Similarity NPD1698 Clinical (unspecified phase)
0.6632 Remote Similarity NPD5764 Clinical (unspecified phase)
0.6632 Remote Similarity NPD6101 Approved
0.6604 Remote Similarity NPD6371 Approved
0.66 Remote Similarity NPD4225 Approved
0.6593 Remote Similarity NPD6435 Approved
0.6593 Remote Similarity NPD4269 Approved
0.6593 Remote Similarity NPD4270 Approved
0.6582 Remote Similarity NPD4246 Clinical (unspecified phase)
0.6559 Remote Similarity NPD1733 Clinical (unspecified phase)
0.6543 Remote Similarity NPD5325 Clinical (unspecified phase)
0.6542 Remote Similarity NPD8413 Clinical (unspecified phase)
0.6522 Remote Similarity NPD5332 Approved
0.6522 Remote Similarity NPD5331 Approved
0.6522 Remote Similarity NPD6695 Phase 3
0.6517 Remote Similarity NPD5784 Clinical (unspecified phase)
0.6495 Remote Similarity NPD6411 Approved
0.6489 Remote Similarity NPD5786 Approved
0.6484 Remote Similarity NPD4790 Discontinued
0.6484 Remote Similarity NPD5369 Approved
0.646 Remote Similarity NPD7503 Approved
0.6452 Remote Similarity NPD7338 Clinical (unspecified phase)
0.6421 Remote Similarity NPD7750 Discontinued
0.6374 Remote Similarity NPD4252 Approved
0.6374 Remote Similarity NPD5368 Approved
0.6374 Remote Similarity NPD7332 Phase 2
0.6374 Remote Similarity NPD7514 Phase 3
0.6364 Remote Similarity NPD8264 Approved
0.6333 Remote Similarity NPD7145 Approved
0.633 Remote Similarity NPD6053 Discontinued
0.6316 Remote Similarity NPD8515 Approved
0.6316 Remote Similarity NPD8513 Phase 3
0.6316 Remote Similarity NPD8444 Approved
0.6316 Remote Similarity NPD8516 Approved
0.6316 Remote Similarity NPD8517 Approved
0.6304 Remote Similarity NPD6902 Approved
0.6289 Remote Similarity NPD1695 Approved
0.6264 Remote Similarity NPD6929 Approved
0.625 Remote Similarity NPD7505 Discontinued
0.625 Remote Similarity NPD7524 Approved
0.6238 Remote Similarity NPD4792 Clinical (unspecified phase)
0.6237 Remote Similarity NPD4752 Clinical (unspecified phase)
0.6222 Remote Similarity NPD6925 Approved
0.6222 Remote Similarity NPD6932 Approved
0.6222 Remote Similarity NPD5776 Phase 2
0.6222 Remote Similarity NPD4756 Discovery
0.6196 Remote Similarity NPD6931 Approved
0.6196 Remote Similarity NPD6930 Phase 2
0.6196 Remote Similarity NPD8259 Clinical (unspecified phase)
0.6195 Remote Similarity NPD7641 Discontinued
0.619 Remote Similarity NPD6647 Phase 2
0.6174 Remote Similarity NPD8033 Approved
0.6136 Remote Similarity NPD4732 Discontinued
0.6122 Remote Similarity NPD5370 Suspended
0.6106 Remote Similarity NPD7500 Approved
0.6102 Remote Similarity NPD8273 Phase 1
0.6102 Remote Similarity NPD8451 Approved
0.6098 Remote Similarity NPD4193 Approved
0.6098 Remote Similarity NPD4191 Approved
0.6098 Remote Similarity NPD4194 Approved
0.6098 Remote Similarity NPD4192 Approved
0.6095 Remote Similarity NPD7632 Discontinued
0.6091 Remote Similarity NPD7116 Clinical (unspecified phase)
0.6087 Remote Similarity NPD8294 Approved
0.6087 Remote Similarity NPD8377 Approved
0.6075 Remote Similarity NPD4211 Phase 1
0.6068 Remote Similarity NPD7642 Approved
0.6053 Remote Similarity NPD7328 Approved
0.6053 Remote Similarity NPD7327 Approved
0.605 Remote Similarity NPD8448 Approved
0.605 Remote Similarity NPD8074 Phase 3
0.6042 Remote Similarity NPD1694 Approved
0.604 Remote Similarity NPD5282 Discontinued
0.6034 Remote Similarity NPD8378 Approved
0.6034 Remote Similarity NPD8379 Approved
0.6034 Remote Similarity NPD8296 Approved
0.6034 Remote Similarity NPD8335 Approved
0.6034 Remote Similarity NPD8380 Approved
0.6 Remote Similarity NPD7516 Approved
0.6 Remote Similarity NPD4810 Clinical (unspecified phase)
0.6 Remote Similarity NPD6110 Phase 1
0.6 Remote Similarity NPD7087 Discontinued
0.5978 Remote Similarity NPD7322 Clinical (unspecified phase)
0.5965 Remote Similarity NPD7115 Discovery
0.5957 Remote Similarity NPD6898 Phase 1
0.5952 Remote Similarity NPD3197 Phase 1
0.5914 Remote Similarity NPD6683 Phase 2
0.5909 Remote Similarity NPD7144 Approved
0.5909 Remote Similarity NPD7143 Approved
0.5902 Remote Similarity NPD8391 Approved
0.5902 Remote Similarity NPD8392 Approved
0.5902 Remote Similarity NPD8390 Approved
0.5889 Remote Similarity NPD6926 Approved
0.5889 Remote Similarity NPD6924 Approved
0.5882 Remote Similarity NPD7748 Approved
0.5882 Remote Similarity NPD8340 Approved
0.5882 Remote Similarity NPD8299 Approved
0.5882 Remote Similarity NPD8341 Approved
0.5882 Remote Similarity NPD8342 Approved
0.5876 Remote Similarity NPD6893 Approved
0.5873 Remote Similarity NPD7966 Clinical (unspecified phase)
0.5872 Remote Similarity NPD6685 Approved
0.5856 Remote Similarity NPD6421 Discontinued
0.5854 Remote Similarity NPD7260 Phase 2
0.5843 Remote Similarity NPD7151 Approved
0.5843 Remote Similarity NPD7152 Approved
0.5843 Remote Similarity NPD7150 Approved
0.58 Remote Similarity NPD6051 Approved
0.5795 Remote Similarity NPD6922 Approved
0.5795 Remote Similarity NPD6923 Approved
0.578 Remote Similarity NPD5048 Discontinued
0.578 Remote Similarity NPD6640 Phase 3
0.5766 Remote Similarity NPD4061 Clinical (unspecified phase)
0.5761 Remote Similarity NPD6933 Approved
0.5752 Remote Similarity NPD8297 Approved
0.5743 Remote Similarity NPD7136 Phase 2
0.5714 Remote Similarity NPD6083 Phase 2
0.5714 Remote Similarity NPD6084 Phase 2
0.5714 Remote Similarity NPD368 Approved
0.5714 Remote Similarity NPD7902 Approved
0.5714 Remote Similarity NPD5955 Clinical (unspecified phase)
0.5702 Remote Similarity NPD7507 Approved
0.5686 Remote Similarity NPD7515 Phase 2
0.5678 Remote Similarity NPD7299 Clinical (unspecified phase)
0.5676 Remote Similarity NPD6881 Approved
0.5676 Remote Similarity NPD6899 Approved
0.5664 Remote Similarity NPD8130 Phase 1
0.5664 Remote Similarity NPD6650 Approved
0.5664 Remote Similarity NPD6649 Approved
0.5657 Remote Similarity NPD6422 Discontinued
0.5641 Remote Similarity NPD6927 Phase 3
0.5638 Remote Similarity NPD3732 Approved
0.5632 Remote Similarity NPD7331 Phase 2
0.5631 Remote Similarity NPD6399 Phase 3
0.5625 Remote Similarity NPD3194 Approved
0.5625 Remote Similarity NPD3195 Phase 2
0.5625 Remote Similarity NPD3196 Approved
0.5625 Remote Similarity NPD4266 Approved
0.5614 Remote Similarity NPD6912 Phase 3
0.5614 Remote Similarity NPD6882 Approved
0.5612 Remote Similarity NPD5766 Clinical (unspecified phase)

  Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data