Structure

Physi-Chem Properties

Molecular Weight:  464.1
Volume:  421.937
LogP:  1.137
LogD:  0.144
LogS:  -4.243
# Rotatable Bonds:  3
TPSA:  210.51
# H-Bond Aceptor:  12
# H-Bond Donor:  8
# Rings:  4
# Heavy Atoms:  12

MedChem Properties

QED Drug-Likeness Score:  0.244
Synthetic Accessibility Score:  4.149
Fsp3:  0.286
Lipinski Rule-of-5:  Rejected
Pfizer Rule:  Accepted
GSK Rule:  Rejected
BMS Rule:  1
Golden Triangle Rule:  Accepted
Chelating Alert:  1
PAINS Alert:  1

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

Caco-2 Permeability:  -6.36
MDCK Permeability:  7.632563210790977e-06
Pgp-inhibitor:  0.027
Pgp-substrate:  0.978
Human Intestinal Absorption (HIA):  0.582
20% Bioavailability (F20%):  0.016
30% Bioavailability (F30%):  0.997

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):  0.008
Plasma Protein Binding (PPB):  89.61616516113281%
Volume Distribution (VD):  0.876
Pgp-substrate:  14.864483833312988%

ADMET: Metabolism

CYP1A2-inhibitor:  0.33
CYP1A2-substrate:  0.073
CYP2C19-inhibitor:  0.024
CYP2C19-substrate:  0.046
CYP2C9-inhibitor:  0.222
CYP2C9-substrate:  0.261
CYP2D6-inhibitor:  0.086
CYP2D6-substrate:  0.149
CYP3A4-inhibitor:  0.089
CYP3A4-substrate:  0.007

ADMET: Excretion

Clearance (CL):  5.033
Half-life (T1/2):  0.894

ADMET: Toxicity

hERG Blockers:  0.036
Human Hepatotoxicity (H-HT):  0.2
Drug-inuced Liver Injury (DILI):  0.982
AMES Toxicity:  0.738
Rat Oral Acute Toxicity:  0.059
Maximum Recommended Daily Dose:  0.15
Skin Sensitization:  0.943
Carcinogencity:  0.022
Eye Corrosion:  0.003
Eye Irritation:  0.848
Respiratory Toxicity:  0.073

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs  

  Natural Product: NPC73855

Natural Product ID:  NPC73855
Common Name*:   Myricitrin
IUPAC Name:   5,7-dihydroxy-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy-2-(3,4,5-trihydroxyphenyl)chromen-4-one
Synonyms:   NSC-19803
Standard InCHIKey:  DCYOADKBABEMIQ-OWMUPTOHSA-N
Standard InCHI:  InChI=1S/C21H20O12/c1-6-14(26)17(29)18(30)21(31-6)33-20-16(28)13-9(23)4-8(22)5-12(13)32-19(20)7-2-10(24)15(27)11(25)3-7/h2-6,14,17-18,21-27,29-30H,1H3/t6-,14-,17+,18+,21-/m0/s1
SMILES:  C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)Oc1c(=O)c2c(cc(cc2oc1c1cc(c(c(c1)O)O)O)O)O)O)O)O
Synthetic Gene Cluster:   n.a.
ChEMBL Identifier:   CHEMBL522983
PubChem CID:   5281673
Chemical Classification**:  
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0000261] Phenylpropanoids and polyketides
      • [CHEMONTID:0000334] Flavonoids
        • [CHEMONTID:0001111] Flavonoid glycosides
          • [CHEMONTID:0001583] Flavonoid O-glycosides
            • [CHEMONTID:0003531] Flavonoid-3-O-glycosides

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO3347 Vaccinium corymbosum Species Ericaceae Eukaryota Fruit n.a. n.a. DOI[10.1016/S0963-9969(99)00095-2]
NPO3057 Polygonum aviculare Species Polygonaceae Eukaryota n.a. whole plant n.a. DOI[10.1016/S1572-557X(05)02007-6]
NPO16098 Boronia pinnata Species Rutaceae Eukaryota n.a. n.a. n.a. PMID[11076549]
NPO19472 Thymus vulgaris Species Lamiaceae Eukaryota Leaves n.a. n.a. PMID[12088434]
NPO15866 Goniothalamus amuyon Species Annonaceae Eukaryota n.a. n.a. n.a. PMID[12713398]
NPO7485 Nymphaea odorata Species Nymphaeaceae Eukaryota n.a. n.a. n.a. PMID[12713413]
NPO2449 Alangium grisolleoides Species Cornaceae Eukaryota n.a. n.a. n.a. PMID[16124751]
NPO14224 Haloxylon recurvum Species Chenopodiaceae Eukaryota n.a. n.a. n.a. PMID[16274989]
NPO22423 Microtropis fokienensis Species Celastraceae Eukaryota stem n.a. n.a. PMID[16643054]
NPO14224 Haloxylon recurvum Species Chenopodiaceae Eukaryota n.a. whole plant n.a. PMID[16651755]
NPO22423 Microtropis fokienensis Species Celastraceae Eukaryota leaves n.a. n.a. PMID[17125218]
NPO22423 Microtropis fokienensis Species Celastraceae Eukaryota n.a. root n.a. PMID[17315960]
NPO22423 Microtropis fokienensis Species Celastraceae Eukaryota roots n.a. n.a. PMID[17315960]
NPO22142 Hippocratea excelsa Species n.a. n.a. n.a. root n.a. PMID[17385912]
NPO22142 Hippocratea excelsa Species n.a. n.a. root bark n.a. n.a. PMID[17385912]
NPO138 Daphniphyllum paxianum Species Daphniphyllaceae Eukaryota n.a. n.a. n.a. PMID[17887722]
NPO15866 Goniothalamus amuyon Species Annonaceae Eukaryota n.a. n.a. n.a. PMID[1791473]
NPO12631 Corylus avellana Species Betulaceae Eukaryota Shells; Leaves n.a. n.a. PMID[18163585]
NPO22423 Microtropis fokienensis Species Celastraceae Eukaryota n.a. n.a. n.a. PMID[18590313]
NPO22791 Astraeus pteridis Species Astraeaceae Eukaryota n.a. n.a. n.a. PMID[19067555]
NPO21036 Celaenodendron mexicanum Species n.a. n.a. n.a. n.a. n.a. PMID[19299148]
NPO1894 Amyris texana Species Rutaceae Eukaryota Leaves n.a. n.a. PMID[20695429]
NPO6364 Pongamiopsis pervilleana Species Fabaceae Eukaryota n.a. Madagascar Dry Forest n.a. PMID[20804165]
NPO28265 Morus alba Species Moraceae Eukaryota n.a. n.a. n.a. PMID[20815207]
NPO29759 Myrica cerifera Species Myricaceae Eukaryota n.a. root n.a. PMID[21141876]
NPO28265 Morus alba Species Moraceae Eukaryota n.a. root n.a. PMID[21319773]
NPO28265 Morus alba Species Moraceae Eukaryota n.a. leaf n.a. PMID[21319773]
NPO28265 Morus alba Species Moraceae Eukaryota n.a. bark n.a. PMID[21319773]
NPO28125 Ephedra equisetina Species Ephedraceae Eukaryota n.a. n.a. n.a. PMID[21465337]
NPO3347 Vaccinium corymbosum Species Ericaceae Eukaryota n.a. fruit n.a. PMID[21648406]
NPO19472 Thymus vulgaris Species Lamiaceae Eukaryota n.a. n.a. n.a. PMID[21707257]
NPO9164 Catunaregam spinosa Species Rubiaceae Eukaryota stem bark n.a. n.a. PMID[21861991]
NPO10149 Lespedeza bicolor Species Fabaceae Eukaryota roots n.a. n.a. PMID[21911291]
NPO28265 Morus alba Species Moraceae Eukaryota n.a. leaf n.a. PMID[22207282]
NPO1346 Nerine bowdenii Species Amaryllidaceae Eukaryota n.a. n.a. n.a. PMID[22312717]
NPO22142 Hippocratea excelsa Species n.a. n.a. n.a. n.a. n.a. PMID[2292687]
NPO7890 Cleistanthus indochinensis Species Phyllanthaceae Eukaryota fruits n.a. n.a. PMID[22938151]
NPO28265 Morus alba Species Moraceae Eukaryota n.a. root n.a. PMID[23806866]
NPO28265 Morus alba Species Moraceae Eukaryota n.a. Konya, Turkey 2007-APR PMID[24901948]
NPO28265 Morus alba Species Moraceae Eukaryota root bark University of Veterinary and Pharmaceutical Sciences Brno (UVPS Brno), Brno, Czech Republic 2011-APR PMID[24901948]
NPO12631 Corylus avellana Species Betulaceae Eukaryota n.a. n.a. n.a. PMID[25420236]
NPO7986 Austrocedrus chilensis Species Cupressaceae Eukaryota n.a. n.a. n.a. PMID[25420758]
NPO28265 Morus alba Species Moraceae Eukaryota leaves Chungbuk, Korea n.a. PMID[25935644]
NPO28265 Morus alba Species Moraceae Eukaryota n.a. root n.a. PMID[25981820]
NPO12631 Corylus avellana Species Betulaceae Eukaryota Leaves n.a. n.a. PMID[26606246]
NPO11877 Penicillium herquei Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[26848504]
NPO28265 Morus alba Species Moraceae Eukaryota n.a. latex n.a. PMID[27294120]
NPO41077 Xanthoceras sorbifolia Bunge Strain Sapindaceae Eukaryota Leaves n.a. n.a. PMID[27623545]
NPO23736 Myrsine africana Species Primulaceae Eukaryota root n.a. n.a. PMID[2778455]
NPO17083 Atraphaxis frutescens Species Polygonaceae Eukaryota n.a. n.a. n.a. PMID[28006914]
NPO12631 Corylus avellana Species Betulaceae Eukaryota Green Leafy Covers n.a. n.a. PMID[28520428]
NPO8752 Xylaria cubensis Species Xylariaceae Eukaryota n.a. n.a. n.a. PMID[28802670]
NPO23736 Myrsine africana Species Primulaceae Eukaryota n.a. n.a. n.a. PMID[29300477]
NPO28265 Morus alba Species Moraceae Eukaryota Root barks n.a. n.a. PMID[3097265]
NPO10149 Lespedeza bicolor Species Fabaceae Eukaryota n.a. n.a. n.a. PMID[31675225]
NPO26277 Euphorbia hirta Species Euphorbiaceae Eukaryota n.a. n.a. n.a. PMID[32141299]
NPO1831 Pseudodistoma arborescens Species Pseudodistomidae Eukaryota n.a. n.a. n.a. PMID[8450325]
NPO11877 Penicillium herquei Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[8609085]
NPO23736 Myrsine africana Species Primulaceae Eukaryota n.a. fruit n.a. Database[Article]
NPO3057 Polygonum aviculare Species Polygonaceae Eukaryota n.a. n.a. n.a. Database[Article]
NPO3347 Vaccinium corymbosum Species Ericaceae Eukaryota Fruit Juice n.a. n.a. Database[FooDB]
NPO19472 Thymus vulgaris Species Lamiaceae Eukaryota Leaf n.a. n.a. Database[FooDB]
NPO19472 Thymus vulgaris Species Lamiaceae Eukaryota Plant n.a. n.a. Database[FooDB]
NPO12631 Corylus avellana Species Betulaceae Eukaryota Seed n.a. n.a. Database[FooDB]
NPO22782 Lens culinaris Species Fabaceae Eukaryota Seed n.a. n.a. Database[FooDB]
NPO19472 Thymus vulgaris Species Lamiaceae Eukaryota Shoot n.a. n.a. Database[FooDB]
NPO22782 Lens culinaris Species Fabaceae Eukaryota Sprout Seedling n.a. n.a. Database[FooDB]
NPO19472 Thymus vulgaris Species Lamiaceae Eukaryota n.a. n.a. Database[FooDB]
NPO12631 Corylus avellana Species Betulaceae Eukaryota n.a. n.a. Database[FooDB]
NPO3347 Vaccinium corymbosum Species Ericaceae Eukaryota n.a. n.a. Database[FooDB]
NPO4594 Vitellaria paradoxa Species Sapotaceae Eukaryota n.a. n.a. Database[FooDB]
NPO4969 Sesbania bispinosa Species Fabaceae Eukaryota n.a. n.a. Database[FooDB]
NPO19472 Thymus vulgaris Species Lamiaceae Eukaryota n.a. n.a. Database[FooDB]
NPO22782 Lens culinaris Species Fabaceae Eukaryota n.a. n.a. Database[FooDB]
NPO22782 Lens culinaris Species Fabaceae Eukaryota n.a. n.a. Database[FooDB]
NPO4594 Vitellaria paradoxa Species Sapotaceae Eukaryota n.a. n.a. Database[FooDB]
NPO19472 Thymus vulgaris Species Lamiaceae Eukaryota Essential Oil n.a. n.a. Database[FooDB]
NPO3347 Vaccinium corymbosum Species Ericaceae Eukaryota Fruit n.a. n.a. Database[FooDB]
NPO22782 Lens culinaris Species Fabaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO8127 Veronica arvensis Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO5054 Limonium gmelinii Species Plumbaginaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO9153 Sorbaria sorbifolia Species Rosaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO11771 Strophanthus kombe Species Apocynaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO19472 Thymus vulgaris Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO10149 Lespedeza bicolor Species Fabaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO28125 Ephedra equisetina Species Ephedraceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO23736 Myrsine africana Species Primulaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO14048 Cryptotaenia japonica Species Apiaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO20715 Astragalus cibarius Species Fabaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO28265 Morus alba Species Moraceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO3057 Polygonum aviculare Species Polygonaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO26277 Euphorbia hirta Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO4702 Trichosanthes rosthornii Species Cucurbitaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO24652 Toxicodendron succedaneum Species Anacardiaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO15866 Goniothalamus amuyon Species Annonaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO22782 Lens culinaris Species Fabaceae Eukaryota Seeds n.a. Database[Phenol-Explorer]
NPO3347 Vaccinium corymbosum Species Ericaceae Eukaryota Fruits n.a. Database[Phenol-Explorer]
NPO19472 Thymus vulgaris Species Lamiaceae Eukaryota n.a. n.a. Database[Phenol-Explorer]
NPO15319 Glochidion sphaerogynum Species Phyllanthaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO10149 Lespedeza bicolor Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO8127 Veronica arvensis Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO19472 Thymus vulgaris Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO20715 Astragalus cibarius Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO11771 Strophanthus kombe Species Apocynaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO28125 Ephedra equisetina Species Ephedraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO14048 Cryptotaenia japonica Species Apiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO22782 Lens culinaris Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO24652 Toxicodendron succedaneum Species Anacardiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO26277 Euphorbia hirta Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO6622 Artemisia klotzchiana Species Asteraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO28265 Morus alba Species Moraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO25716 Persicaria orientalis Species Polygonaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO11018 Acanthospermum glabratum Species Asteraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO5054 Limonium gmelinii Species Plumbaginaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO23736 Myrsine africana Species Primulaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO3057 Polygonum aviculare Species Polygonaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO15866 Goniothalamus amuyon Species Annonaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO4702 Trichosanthes rosthornii Species Cucurbitaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO5637 Globularia davisiana Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO28816 Capnoides sempervirens Species Papaveraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO9153 Sorbaria sorbifolia Species Rosaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO24652 Toxicodendron succedaneum Species Anacardiaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO11771 Strophanthus kombe Species Apocynaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO4702 Trichosanthes rosthornii Species Cucurbitaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO19472 Thymus vulgaris Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO5054 Limonium gmelinii Species Plumbaginaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO28125 Ephedra equisetina Species Ephedraceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO10149 Lespedeza bicolor Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO28265 Morus alba Species Moraceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO14048 Cryptotaenia japonica Species Apiaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO3057 Polygonum aviculare Species Polygonaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO9153 Sorbaria sorbifolia Species Rosaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO25716 Persicaria orientalis Species Polygonaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO28265 Morus alba Species Moraceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO3057 Polygonum aviculare Species Polygonaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO26277 Euphorbia hirta Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO19472 Thymus vulgaris Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO4702 Trichosanthes rosthornii Species Cucurbitaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO28125 Ephedra equisetina Species Ephedraceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO14564 Oophaga pumilio Species Dendrobatidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO4594 Vitellaria paradoxa Species Sapotaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17130 Hylotelephium telephium Species Crassulaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO5054 Limonium gmelinii Species Plumbaginaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO23879 Serratula inermis Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO1580 Heliotropium ternatum Species Heliotropiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11018 Acanthospermum glabratum Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO14939 Piptocarpha oblonga Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO23954 Tridachia crispata n.a. n.a. n.a. n.a. n.a. n.a. Database[UNPD]
NPO15866 Goniothalamus amuyon Species Annonaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21255 Hymenoxys insignis Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO22423 Microtropis fokienensis Species Celastraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO23663 Psoroma pallidum Species Pannariaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO28033 Trididemnum cyclops Species Didemnidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9697 Araliopsis soyauxii n.a. n.a. n.a. n.a. n.a. n.a. Database[UNPD]
NPO9252 Adina sessilifolia Species Rubiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24327 Machilus macrantha Species Lauraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO27769 Annona ambotay Species Annonaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24376 Macrothele gigas Species Hexathelidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21542 Vernonia menthaefolia Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21956 Alyxia reinwardtii Species Apocynaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8679 Streptomyces sparsogenes Species Streptomycetaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO2484 Litsea triflora Species Lauraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21164 Veratrum dahuricum Species Melanthiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11877 Penicillium herquei Species Aspergillaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15005 Sargassum muticum Species Sargassaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO7890 Cleistanthus indochinensis Species Phyllanthaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO6569 Ranunculus fluitans Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12861 Holomelina lamae n.a. n.a. n.a. n.a. n.a. n.a. Database[UNPD]
NPO7485 Nymphaea odorata Species Nymphaeaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12987 Rhododendron farrerae Species Ericaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO22142 Hippocratea excelsa Species n.a. n.a. n.a. n.a. n.a. Database[UNPD]
NPO18859 Carica pennata Species Caricaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18054 Curvularia coicis Species Pleosporaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO1894 Amyris texana Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO28630 Myrocarpus frondosus Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25848 Oscillochloris trichoides Species Oscillochloridaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO16866 Rhododendron luteum Species Ericaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12631 Corylus avellana Species Betulaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21036 Celaenodendron mexicanum Species n.a. n.a. n.a. n.a. n.a. Database[UNPD]
NPO1458 Burkholderia gladioli Species Burkholderiaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO1831 Pseudodistoma arborescens Species Pseudodistomidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO23736 Myrsine africana Species Primulaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO6845 Mimusops caffra Species Sapotaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9164 Catunaregam spinosa Species Rubiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO4702 Trichosanthes rosthornii Species Cucurbitaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO23494 Centaurea linifolia Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO6667 Zephyranthes sulphurea Species Amaryllidaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO5637 Globularia davisiana Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO7398 Zanthoxylum fagara Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO138 Daphniphyllum paxianum Species Daphniphyllaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24652 Toxicodendron succedaneum Species Anacardiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17282 Pinguicula vulgaris Species Lentibulariaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17083 Atraphaxis frutescens Species Polygonaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO28687 Cladosiphon decipiens Species Chordariaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20604 Cneoridium dumosum Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21918 Aconitum heterophylloides Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO164 Senecio carthamoides Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11657 Angelica lucida Species Apiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18373 Chromodoris lochi Species Chromodorididae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO4969 Sesbania bispinosa Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO1346 Nerine bowdenii Species Amaryllidaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO16720 Gardenia turgida Species Rubiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9153 Sorbaria sorbifolia Species Rosaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO14048 Cryptotaenia japonica Species Apiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO14224 Haloxylon recurvum Species Chenopodiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15319 Glochidion sphaerogynum Species Phyllanthaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO22782 Lens culinaris Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8127 Veronica arvensis Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20994 Cryptocarya alba Species Lauraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13472 Cotula cinerea Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8752 Xylaria cubensis Species Xylariaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26277 Euphorbia hirta Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13326 Micarea austroternaria Species Micareaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO28265 Morus alba Species Moraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO3347 Vaccinium corymbosum Species Ericaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11823 Marine actinobacterium n.a. n.a. n.a. n.a. n.a. n.a. Database[UNPD]
NPO28816 Capnoides sempervirens Species Papaveraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO1332 Inula salicifolia Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19969 Dermocybe canaria Species Cortinariaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19472 Thymus vulgaris Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12887 Brevibacterium linens Species Brevibacteriaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO1697 Bitis gabonica Species Viperidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO3788 Bunias orientalis Species Brassicaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO1118 Elymus repens Species Poaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO5735 Solidago serotina Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO16729 Annella reticulata Species Subergorgiidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18208 Streptomyces thermoviolaceus Species Streptomycetaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO20715 Astragalus cibarius Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO4375 Rhododendron ellipticum Species Ericaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO16098 Boronia pinnata Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO28125 Ephedra equisetina Species Ephedraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO28349 Eria pubescens Species Orchidaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26958 Uvaria griffithii Species Annonaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO22791 Astraeus pteridis Species Astraeaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11771 Strophanthus kombe Species Apocynaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20659 Aplysia parvula Species Aplysiidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8323 Ilex lepta Species Aquifoliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO2449 Alangium grisolleoides Species Cornaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO6622 Artemisia klotzchiana Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO10149 Lespedeza bicolor Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO6364 Pongamiopsis pervilleana Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12835 Cyrtomium falcatum Species Dryopteridaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21958 Stereospermum cylindricum Species Bignoniaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11444 Arum alpinum Species Araceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21904 Tarenaya spinosa Species Cleomaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO3995 Limonium sinense Species Plumbaginaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO28084 Aspergillus panamensis Species Aspergillaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO7986 Austrocedrus chilensis Species Cupressaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12101 Ajuga genevensis Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11934 Castanea vesca Species Fagaceae Eukaryota n.a. n.a. n.a. Database[UNPD]

☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  NP Quantity Composition/Concentration

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference
NPO3347 NPC73855 n.a. Fruits 1.035 n.a. n.a. mg/100g of FW Database [Phenol-Explorer]
NPO22782 NPC73855 n.a. Seeds 0.57 n.a. n.a. mg/100g of FW Database [Phenol-Explorer]

☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT91 Cell Line KB Homo sapiens ED50 = 8.3 ug ml-1 PMID[515964]
NPT3835 Individual Protein Mannose-6-phosphate isomerase Homo sapiens IC50 = 30965.0 nM PMID[515965]
NPT47 Individual Protein ATP-dependent DNA helicase Q1 Homo sapiens Potency = 28183.8 nM PMID[515965]
NPT48 Individual Protein Lysine-specific demethylase 4D-like Homo sapiens Potency = 2238.7 nM PMID[515965]
NPT50 Individual Protein Tyrosyl-DNA phosphodiesterase 1 Homo sapiens Potency = 891.3 nM PMID[515965]
NPT51 Individual Protein Microtubule-associated protein tau Homo sapiens Potency = 15848.9 nM PMID[515965]
NPT51 Individual Protein Microtubule-associated protein tau Homo sapiens Potency = 17782.8 nM PMID[515965]
NPT53 Individual Protein 4'-phosphopantetheinyl transferase ffp Bacillus subtilis Potency = 56234.1 nM PMID[515966]
NPT53 Individual Protein 4'-phosphopantetheinyl transferase ffp Bacillus subtilis Potency = 31622.8 nM PMID[515965]
NPT51 Individual Protein Microtubule-associated protein tau Homo sapiens Potency = 3548.1 nM PMID[515965]
NPT55 Individual Protein Putative fructose-1,6-bisphosphate aldolase Giardia intestinalis Potency = 5000.0 nM PMID[515965]
NPT55 Individual Protein Putative fructose-1,6-bisphosphate aldolase Giardia intestinalis Potency = 15811.4 nM PMID[515966]
NPT60 Individual Protein Lysosomal alpha-glucosidase Homo sapiens Potency = 3162.3 nM PMID[515965]
NPT59 Individual Protein DNA polymerase beta Homo sapiens Potency = 10000.0 nM PMID[515965]
NPT532 Individual Protein Lysine-specific demethylase 4A Homo sapiens Potency n.a. 31622.8 nM PMID[515965]
NPT5 Individual Protein Histone-lysine N-methyltransferase, H3 lysine-9 specific 3 Homo sapiens Potency n.a. 44668.4 nM PMID[515965]
NPT63 Individual Protein Bromodomain adjacent to zinc finger domain protein 2B Homo sapiens Potency n.a. 50118.7 nM PMID[515965]
NPT135 Individual Protein Chromobox protein homolog 1 Homo sapiens Potency n.a. 8912.5 nM PMID[515965]
NPT199 Individual Protein DNA polymerase kappa Homo sapiens Potency n.a. 1683.4 nM PMID[515966]
NPT199 Individual Protein DNA polymerase kappa Homo sapiens Potency n.a. 25118.9 nM PMID[515965]
NPT1356 Individual Protein Protein disulfide-isomerase Homo sapiens AC50 = 9800.0 nM PMID[515965]
NPT100 Individual Protein Glutaminase kidney isoform, mitochondrial Homo sapiens Potency n.a. 15848.9 nM PMID[515965]
NPT478 Individual Protein Ataxin-2 Homo sapiens Potency n.a. 35481.3 nM PMID[515965]
NPT1356 Individual Protein Protein disulfide-isomerase Homo sapiens AC50 n.a. 9800.0 nM PMID[515965]
NPT1853 Individual Protein Putative uncharacterized protein Trypanosoma brucei brucei (strain 927/4 GUTat10.1) Potency n.a. 50118.7 nM PMID[515965]
NPT50 Individual Protein Tyrosyl-DNA phosphodiesterase 1 Homo sapiens Potency n.a. 23109.3 nM PMID[515965]
NPT50 Individual Protein Tyrosyl-DNA phosphodiesterase 1 Homo sapiens Potency n.a. 29092.9 nM PMID[515965]
NPT2677 Individual Protein Receptor-type tyrosine-protein phosphatase beta Homo sapiens Kis > 125.7 uM PMID[515968]
NPT105 Individual Protein Muscleblind-like protein 1 Homo sapiens Potency n.a. 12589.3 nM PMID[515965]
NPT49 Individual Protein DNA-(apurinic or apyrimidinic site) lyase Homo sapiens Potency n.a. 14125.4 nM PMID[515965]
NPT49 Individual Protein DNA-(apurinic or apyrimidinic site) lyase Homo sapiens Potency n.a. 10000.0 nM PMID[515966]
NPT446 Individual Protein Rap guanine nucleotide exchange factor 3 Homo sapiens Potency n.a. 89125.1 nM PMID[515965]
NPT43 Individual Protein Tyrosinase Agaricus bisporus IC50 = 320000.0 nM PMID[515972]
NPT43 Individual Protein Tyrosinase Agaricus bisporus IC50 = 120000.0 nM PMID[515972]
NPT1970 Cell Line THP-1 Homo sapiens Inhibition = 19.46 % PMID[515976]
NPT94 Individual Protein Aldehyde dehydrogenase 1A1 Homo sapiens Potency = 25118.9 nM PMID[515965]
NPT795 Individual Protein Zinc finger protein mex-5 Caenorhabditis elegans EC50 = 14047.0 nM PMID[515965]
NPT2 Others Unspecified EC50 > 110000.0 nM PMID[515965]
NPT797 Individual Protein Cytoplasmic zinc-finger protein Caenorhabditis elegans EC50 = 15805.0 nM PMID[515965]
NPT2 Others Unspecified Potency n.a. 25929.0 nM PMID[515965]
NPT533 Protein-Protein Interaction Runt-related transcription factor 1/Core-binding factor subunit beta Homo sapiens Potency n.a. 25118.9 nM PMID[515966]
NPT533 Protein-Protein Interaction Runt-related transcription factor 1/Core-binding factor subunit beta Homo sapiens Potency n.a. 28183.8 nM PMID[515965]
NPT6 Organism Plasmodium falciparum Plasmodium falciparum Potency n.a. 3696.4 nM PMID[515965]
NPT8 Individual Protein DNA polymerase iota Homo sapiens Potency n.a. 50118.7 nM PMID[515965]
NPT803 Individual Protein Flap endonuclease 1 Homo sapiens Potency n.a. 2238.7 nM PMID[515965]
NPT9 Individual Protein DNA polymerase eta Homo sapiens Potency n.a. 39810.7 nM PMID[515965]
NPT6 Organism Plasmodium falciparum Plasmodium falciparum Potency n.a. 13115.4 nM PMID[515965]
NPT2 Others Unspecified Potency n.a. 32642.7 nM PMID[515965]
NPT2 Others Unspecified Potency n.a. 3981.1 nM PMID[515965]
NPT755 Individual Protein Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 Homo sapiens Potency n.a. 39810.7 nM PMID[515965]
NPT2 Others Unspecified IC50 = 8246.0 nM PMID[515965]
NPT831 Individual Protein Serine/threonine-protein kinase PLK1 Homo sapiens Potency n.a. 37685.8 nM PMID[515965]
NPT2 Others Unspecified IC50 = 1642.0 nM PMID[515965]
NPT803 Individual Protein Flap endonuclease 1 Homo sapiens Potency n.a. 3013.1 nM PMID[515965]
NPT2 Others Unspecified Potency n.a. 25118.9 nM PMID[515966]
NPT8 Individual Protein DNA polymerase iota Homo sapiens Potency n.a. 75193.0 nM PMID[515965]
NPT22758 SINGLE PROTEIN RNA-editing ligase 1, mitochondrial Trypanosoma brucei brucei IC50 = 51381.0 nM PMID[515965]
NPT2 Others Unspecified IC50 = 837700.0 nM PMID[515969]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. IC50 > 100000.0 nM PMID[515970]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Activity = 99.48 % PMID[515970]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Activity = 97.88 % PMID[515970]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Activity = 99.35 % PMID[515970]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Activity = 107.43 % PMID[515970]
NPT35 Others n.a. IC50 = 19800.0 nM PMID[515971]
NPT2 Others Unspecified IC50 > 300000.0 nM PMID[515971]
NPT2 Others Unspecified IC50 = 2000000.0 nM PMID[515971]
NPT35 Others n.a. IC50 = 2000.0 nM PMID[515972]
NPT78 Individual Protein Beta amyloid A4 protein Homo sapiens Inhibition = 62.2 % PMID[515973]
NPT621 Tissue Plasma Homo sapiens Inhibition = 34.1 % PMID[515974]
NPT621 Tissue Plasma Homo sapiens Inhibition = 44.4 % PMID[515974]
NPT19 Organism Escherichia coli Escherichia coli IZ = 9.67 mm PMID[515974]
NPT314 Organism Bacillus cereus Bacillus cereus IZ = 0.0 mm PMID[515974]
NPT18 Organism Pseudomonas aeruginosa Pseudomonas aeruginosa IZ = 5.0 mm PMID[515974]
NPT16 Organism Staphylococcus aureus Staphylococcus aureus IZ = 6.33 mm PMID[515974]
NPT188 Organism Candida parapsilosis Candida parapsilosis MIC > 83.0 ug.mL-1 PMID[515975]
NPT186 Organism Candida tropicalis Candida tropicalis MIC > 83.0 ug.mL-1 PMID[515975]
NPT187 Organism Issatchenkia orientalis Pichia kudriavzevii MIC > 83.0 ug.mL-1 PMID[515975]
NPT20 Organism Candida albicans Candida albicans MIC > 83.0 ug.mL-1 PMID[515975]
NPT554 Organism Candida glabrata Candida glabrata MIC = 3.9 ug.mL-1 PMID[515975]
NPT2 Others Unspecified IC50 = 1800.0 nM PMID[515977]

☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

  Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC73855 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC135599
1.0 High Similarity NPC277174
1.0 High Similarity NPC113968
1.0 High Similarity NPC328940
0.9936 High Similarity NPC127546
0.9936 High Similarity NPC52550
0.9936 High Similarity NPC19388
0.9936 High Similarity NPC325555
0.9936 High Similarity NPC226304
0.9936 High Similarity NPC223424
0.9936 High Similarity NPC265530
0.9936 High Similarity NPC84362
0.9936 High Similarity NPC173637
0.9936 High Similarity NPC240431
0.9936 High Similarity NPC317489
0.9936 High Similarity NPC55786
0.9873 High Similarity NPC145038
0.9873 High Similarity NPC88789
0.9873 High Similarity NPC219904
0.9873 High Similarity NPC118284
0.9873 High Similarity NPC120099
0.9873 High Similarity NPC56077
0.9873 High Similarity NPC253662
0.9873 High Similarity NPC203050
0.9873 High Similarity NPC223747
0.9873 High Similarity NPC276222
0.9873 High Similarity NPC308404
0.9873 High Similarity NPC274618
0.9873 High Similarity NPC179950
0.9873 High Similarity NPC281131
0.9873 High Similarity NPC225434
0.9811 High Similarity NPC95866
0.9811 High Similarity NPC244776
0.9811 High Similarity NPC206123
0.9811 High Similarity NPC116864
0.9809 High Similarity NPC277205
0.9808 High Similarity NPC473043
0.975 High Similarity NPC471748
0.975 High Similarity NPC203259
0.975 High Similarity NPC176740
0.975 High Similarity NPC190003
0.975 High Similarity NPC471725
0.975 High Similarity NPC153755
0.975 High Similarity NPC175107
0.975 High Similarity NPC33054
0.975 High Similarity NPC245452
0.975 High Similarity NPC155877
0.975 High Similarity NPC134532
0.9748 High Similarity NPC52382
0.9748 High Similarity NPC227508
0.9748 High Similarity NPC138927
0.9748 High Similarity NPC270578
0.9747 High Similarity NPC197285
0.9747 High Similarity NPC21100
0.9745 High Similarity NPC222936
0.9745 High Similarity NPC19709
0.9745 High Similarity NPC284960
0.9689 High Similarity NPC101026
0.9689 High Similarity NPC24043
0.9689 High Similarity NPC4390
0.9689 High Similarity NPC21666
0.9689 High Similarity NPC42773
0.9689 High Similarity NPC45522
0.9689 High Similarity NPC169977
0.9688 High Similarity NPC67105
0.9688 High Similarity NPC259896
0.9688 High Similarity NPC235260
0.9688 High Similarity NPC156869
0.9688 High Similarity NPC155763
0.9688 High Similarity NPC20505
0.9688 High Similarity NPC255157
0.9688 High Similarity NPC254855
0.9688 High Similarity NPC136042
0.9688 High Similarity NPC29958
0.9688 High Similarity NPC67326
0.9686 High Similarity NPC92565
0.9686 High Similarity NPC275454
0.9686 High Similarity NPC160156
0.9684 High Similarity NPC311830
0.9684 High Similarity NPC34531
0.9684 High Similarity NPC22832
0.9682 High Similarity NPC189142
0.9682 High Similarity NPC77660
0.963 High Similarity NPC294815
0.963 High Similarity NPC473327
0.963 High Similarity NPC19108
0.963 High Similarity NPC220173
0.963 High Similarity NPC476472
0.963 High Similarity NPC294629
0.963 High Similarity NPC16194
0.9627 High Similarity NPC26230
0.9627 High Similarity NPC60735
0.9627 High Similarity NPC476405
0.9627 High Similarity NPC117260
0.9625 High Similarity NPC476771
0.9623 High Similarity NPC210073
0.9623 High Similarity NPC115674
0.9623 High Similarity NPC255615
0.9623 High Similarity NPC67037
0.962 High Similarity NPC168822
0.962 High Similarity NPC243930
0.962 High Similarity NPC270335
0.962 High Similarity NPC309025
0.962 High Similarity NPC191306
0.962 High Similarity NPC88023
0.9571 High Similarity NPC470949
0.9571 High Similarity NPC198324
0.9571 High Similarity NPC202908
0.9571 High Similarity NPC122467
0.9571 High Similarity NPC292019
0.9571 High Similarity NPC65563
0.9571 High Similarity NPC89127
0.9571 High Similarity NPC472385
0.9571 High Similarity NPC14187
0.9571 High Similarity NPC471669
0.9565 High Similarity NPC245014
0.9565 High Similarity NPC285197
0.9565 High Similarity NPC84265
0.9565 High Similarity NPC282987
0.9563 High Similarity NPC149244
0.9563 High Similarity NPC229729
0.9563 High Similarity NPC48640
0.9557 High Similarity NPC300537
0.9557 High Similarity NPC127782
0.9554 High Similarity NPC110349
0.9512 High Similarity NPC258044
0.9512 High Similarity NPC217520
0.9512 High Similarity NPC217387
0.9512 High Similarity NPC196127
0.9512 High Similarity NPC251417
0.9512 High Similarity NPC293626
0.9512 High Similarity NPC267680
0.9512 High Similarity NPC139571
0.9512 High Similarity NPC35167
0.9512 High Similarity NPC168584
0.9512 High Similarity NPC89052
0.9512 High Similarity NPC173837
0.9509 High Similarity NPC49344
0.9509 High Similarity NPC210094
0.9509 High Similarity NPC43211
0.9509 High Similarity NPC34267
0.9509 High Similarity NPC214621
0.9509 High Similarity NPC101191
0.9509 High Similarity NPC264735
0.9509 High Similarity NPC253685
0.9509 High Similarity NPC477848
0.9509 High Similarity NPC115760
0.9509 High Similarity NPC237435
0.9509 High Similarity NPC135277
0.9509 High Similarity NPC223426
0.9509 High Similarity NPC81042
0.9506 High Similarity NPC476772
0.9503 High Similarity NPC45638
0.9503 High Similarity NPC475942
0.9503 High Similarity NPC201292
0.9503 High Similarity NPC58053
0.9503 High Similarity NPC105025
0.9503 High Similarity NPC209296
0.9503 High Similarity NPC186807
0.9503 High Similarity NPC93337
0.9503 High Similarity NPC195257
0.9503 High Similarity NPC226294
0.9503 High Similarity NPC469931
0.95 High Similarity NPC254306
0.95 High Similarity NPC5778
0.95 High Similarity NPC8856
0.95 High Similarity NPC236934
0.9497 High Similarity NPC29830
0.9494 High Similarity NPC182045
0.949 High Similarity NPC41121
0.949 High Similarity NPC472459
0.949 High Similarity NPC320283
0.949 High Similarity NPC111929
0.9487 High Similarity NPC261866
0.9455 High Similarity NPC470443
0.9455 High Similarity NPC470444
0.9455 High Similarity NPC110941
0.9455 High Similarity NPC241423
0.9455 High Similarity NPC473571
0.9455 High Similarity NPC192539
0.9455 High Similarity NPC473682
0.9455 High Similarity NPC126784
0.9451 High Similarity NPC473862
0.9451 High Similarity NPC144097
0.9451 High Similarity NPC233994
0.9451 High Similarity NPC48984
0.9451 High Similarity NPC211532
0.9451 High Similarity NPC61904
0.9451 High Similarity NPC8573
0.9451 High Similarity NPC219043
0.9451 High Similarity NPC169733
0.9444 High Similarity NPC150767
0.9444 High Similarity NPC224462
0.9444 High Similarity NPC231194
0.9444 High Similarity NPC72249
0.9444 High Similarity NPC78734
0.9444 High Similarity NPC51326
0.9441 High Similarity NPC146792
0.9441 High Similarity NPC477502
0.9441 High Similarity NPC58716

  Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC73855 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.975 High Similarity NPD6797 Phase 2
0.9689 High Similarity NPD7251 Discontinued
0.9509 High Similarity NPD7808 Phase 3
0.9509 High Similarity NPD4338 Clinical (unspecified phase)
0.9503 High Similarity NPD7054 Approved
0.9444 High Similarity NPD7472 Approved
0.9325 High Similarity NPD7074 Phase 3
0.9202 High Similarity NPD3818 Discontinued
0.9182 High Similarity NPD4381 Clinical (unspecified phase)
0.9146 High Similarity NPD7804 Clinical (unspecified phase)
0.908 High Similarity NPD6167 Clinical (unspecified phase)
0.908 High Similarity NPD6166 Phase 2
0.908 High Similarity NPD6168 Clinical (unspecified phase)
0.8938 High Similarity NPD3817 Phase 2
0.8931 High Similarity NPD1934 Approved
0.8875 High Similarity NPD2393 Clinical (unspecified phase)
0.879 High Similarity NPD1512 Approved
0.8765 High Similarity NPD3882 Suspended
0.8758 High Similarity NPD2801 Approved
0.8662 High Similarity NPD1511 Approved
0.865 High Similarity NPD4868 Clinical (unspecified phase)
0.8598 High Similarity NPD7075 Discontinued
0.8571 High Similarity NPD4380 Phase 2
0.848 Intermediate Similarity NPD7993 Clinical (unspecified phase)
0.8476 Intermediate Similarity NPD5402 Approved
0.8466 Intermediate Similarity NPD6801 Discontinued
0.843 Intermediate Similarity NPD6559 Discontinued
0.8415 Intermediate Similarity NPD7096 Clinical (unspecified phase)
0.8385 Intermediate Similarity NPD5403 Approved
0.8375 Intermediate Similarity NPD4378 Clinical (unspecified phase)
0.8313 Intermediate Similarity NPD6799 Approved
0.8261 Intermediate Similarity NPD5401 Approved
0.8165 Intermediate Similarity NPD1552 Clinical (unspecified phase)
0.8165 Intermediate Similarity NPD1550 Clinical (unspecified phase)
0.8113 Intermediate Similarity NPD1549 Phase 2
0.8111 Intermediate Similarity NPD7879 Clinical (unspecified phase)
0.811 Intermediate Similarity NPD1653 Approved
0.8092 Intermediate Similarity NPD3751 Discontinued
0.807 Intermediate Similarity NPD3787 Discontinued
0.8059 Intermediate Similarity NPD5494 Approved
0.8036 Intermediate Similarity NPD8443 Clinical (unspecified phase)
0.8012 Intermediate Similarity NPD6599 Discontinued
0.8012 Intermediate Similarity NPD6959 Discontinued
0.7987 Intermediate Similarity NPD2796 Approved
0.7976 Intermediate Similarity NPD7819 Suspended
0.7976 Intermediate Similarity NPD1465 Phase 2
0.7964 Intermediate Similarity NPD7411 Suspended
0.7943 Intermediate Similarity NPD5844 Phase 1
0.7927 Intermediate Similarity NPD7410 Clinical (unspecified phase)
0.7925 Intermediate Similarity NPD1510 Phase 2
0.7919 Intermediate Similarity NPD7184 Clinical (unspecified phase)
0.791 Intermediate Similarity NPD7685 Pre-registration
0.7886 Intermediate Similarity NPD7228 Approved
0.7861 Intermediate Similarity NPD6232 Discontinued
0.7831 Intermediate Similarity NPD6980 Clinical (unspecified phase)
0.7829 Intermediate Similarity NPD7473 Discontinued
0.7803 Intermediate Similarity NPD7199 Phase 2
0.7791 Intermediate Similarity NPD6234 Discontinued
0.7791 Intermediate Similarity NPD919 Approved
0.7785 Intermediate Similarity NPD1612 Clinical (unspecified phase)
0.7785 Intermediate Similarity NPD1613 Approved
0.7778 Intermediate Similarity NPD970 Clinical (unspecified phase)
0.7744 Intermediate Similarity NPD6190 Approved
0.7735 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.7722 Intermediate Similarity NPD8313 Approved
0.7722 Intermediate Similarity NPD8312 Approved
0.7716 Intermediate Similarity NPD7266 Discontinued
0.7713 Intermediate Similarity NPD6780 Approved
0.7713 Intermediate Similarity NPD6781 Approved
0.7713 Intermediate Similarity NPD6782 Approved
0.7713 Intermediate Similarity NPD6777 Approved
0.7713 Intermediate Similarity NPD6776 Approved
0.7713 Intermediate Similarity NPD6778 Approved
0.7713 Intermediate Similarity NPD6779 Approved
0.7706 Intermediate Similarity NPD37 Approved
0.7701 Intermediate Similarity NPD1247 Approved
0.7684 Intermediate Similarity NPD7435 Discontinued
0.7683 Intermediate Similarity NPD1878 Clinical (unspecified phase)
0.7674 Intermediate Similarity NPD4967 Phase 2
0.7674 Intermediate Similarity NPD4966 Approved
0.7674 Intermediate Similarity NPD4965 Approved
0.7673 Intermediate Similarity NPD1240 Approved
0.767 Intermediate Similarity NPD7852 Clinical (unspecified phase)
0.7656 Intermediate Similarity NPD7584 Approved
0.7625 Intermediate Similarity NPD230 Phase 1
0.7614 Intermediate Similarity NPD3926 Phase 2
0.7609 Intermediate Similarity NPD8397 Clinical (unspecified phase)
0.758 Intermediate Similarity NPD1530 Clinical (unspecified phase)
0.7578 Intermediate Similarity NPD1607 Approved
0.7577 Intermediate Similarity NPD8151 Discontinued
0.7576 Intermediate Similarity NPD3750 Approved
0.7562 Intermediate Similarity NPD943 Approved
0.7553 Intermediate Similarity NPD8090 Clinical (unspecified phase)
0.7545 Intermediate Similarity NPD6143 Clinical (unspecified phase)
0.7532 Intermediate Similarity NPD1529 Clinical (unspecified phase)
0.7516 Intermediate Similarity NPD1933 Approved
0.75 Intermediate Similarity NPD7696 Phase 3
0.75 Intermediate Similarity NPD7697 Approved
0.75 Intermediate Similarity NPD7698 Approved
0.7484 Intermediate Similarity NPD3027 Phase 3
0.7471 Intermediate Similarity NPD7768 Phase 2
0.747 Intermediate Similarity NPD4628 Phase 3
0.7461 Intermediate Similarity NPD7870 Phase 2
0.7461 Intermediate Similarity NPD7871 Phase 2
0.7457 Intermediate Similarity NPD8455 Phase 2
0.7449 Intermediate Similarity NPD7874 Approved
0.7449 Intermediate Similarity NPD7875 Clinical (unspecified phase)
0.7447 Intermediate Similarity NPD6534 Approved
0.7447 Intermediate Similarity NPD6535 Approved
0.7439 Intermediate Similarity NPD1551 Phase 2
0.7438 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.7436 Intermediate Similarity NPD7701 Phase 2
0.7429 Intermediate Similarity NPD3749 Approved
0.7418 Intermediate Similarity NPD7240 Approved
0.7396 Intermediate Similarity NPD2533 Approved
0.7396 Intermediate Similarity NPD2532 Approved
0.7396 Intermediate Similarity NPD2534 Approved
0.7378 Intermediate Similarity NPD651 Clinical (unspecified phase)
0.7333 Intermediate Similarity NPD2935 Discontinued
0.733 Intermediate Similarity NPD7699 Phase 2
0.733 Intermediate Similarity NPD7700 Phase 2
0.7323 Intermediate Similarity NPD7783 Phase 2
0.7323 Intermediate Similarity NPD7782 Clinical (unspecified phase)
0.7323 Intermediate Similarity NPD7801 Approved
0.7305 Intermediate Similarity NPD2800 Approved
0.7305 Intermediate Similarity NPD7421 Clinical (unspecified phase)
0.7301 Intermediate Similarity NPD447 Suspended
0.7282 Intermediate Similarity NPD8319 Approved
0.7282 Intermediate Similarity NPD8320 Phase 1
0.7278 Intermediate Similarity NPD7784 Clinical (unspecified phase)
0.7273 Intermediate Similarity NPD3748 Approved
0.7268 Intermediate Similarity NPD6823 Phase 2
0.7259 Intermediate Similarity NPD7585 Approved
0.7229 Intermediate Similarity NPD6099 Approved
0.7229 Intermediate Similarity NPD6100 Approved
0.7222 Intermediate Similarity NPD6798 Discontinued
0.7219 Intermediate Similarity NPD8434 Phase 2
0.7219 Intermediate Similarity NPD8150 Discontinued
0.7209 Intermediate Similarity NPD920 Approved
0.7208 Intermediate Similarity NPD7583 Approved
0.7202 Intermediate Similarity NPD6674 Discontinued
0.7202 Intermediate Similarity NPD1243 Approved
0.7197 Intermediate Similarity NPD1091 Approved
0.7193 Intermediate Similarity NPD7004 Clinical (unspecified phase)
0.7189 Intermediate Similarity NPD4419 Clinical (unspecified phase)
0.7178 Intermediate Similarity NPD6233 Phase 2
0.7174 Intermediate Similarity NPD5953 Discontinued
0.7173 Intermediate Similarity NPD4363 Phase 3
0.7173 Intermediate Similarity NPD4360 Phase 2
0.7169 Intermediate Similarity NPD7033 Discontinued
0.7165 Intermediate Similarity NPD7501 Clinical (unspecified phase)
0.7152 Intermediate Similarity NPD6651 Approved
0.7135 Intermediate Similarity NPD7390 Discontinued
0.7126 Intermediate Similarity NPD3226 Approved
0.7126 Intermediate Similarity NPD7458 Discontinued
0.7113 Intermediate Similarity NPD7237 Clinical (unspecified phase)
0.7102 Intermediate Similarity NPD6844 Discontinued
0.7101 Intermediate Similarity NPD1652 Phase 2
0.7099 Intermediate Similarity NPD4908 Phase 1
0.7099 Intermediate Similarity NPD6832 Phase 2
0.7093 Intermediate Similarity NPD642 Clinical (unspecified phase)
0.7091 Intermediate Similarity NPD6355 Discontinued
0.7087 Intermediate Similarity NPD8155 Clinical (unspecified phase)
0.7081 Intermediate Similarity NPD2798 Approved
0.7076 Intermediate Similarity NPD643 Clinical (unspecified phase)
0.7065 Intermediate Similarity NPD7286 Phase 2
0.7059 Intermediate Similarity NPD6398 Clinical (unspecified phase)
0.7037 Intermediate Similarity NPD9494 Approved
0.7031 Intermediate Similarity NPD6214 Clinical (unspecified phase)
0.7031 Intermediate Similarity NPD6212 Phase 3
0.7031 Intermediate Similarity NPD6213 Phase 3
0.7022 Intermediate Similarity NPD5353 Approved
0.7019 Intermediate Similarity NPD5619 Clinical (unspecified phase)
0.7019 Intermediate Similarity NPD1203 Approved
0.7012 Intermediate Similarity NPD4907 Clinical (unspecified phase)
0.7012 Intermediate Similarity NPD2313 Discontinued
0.7 Intermediate Similarity NPD4379 Clinical (unspecified phase)
0.6995 Remote Similarity NPD2403 Approved
0.6994 Remote Similarity NPD7422 Clinical (unspecified phase)
0.6988 Remote Similarity NPD5123 Clinical (unspecified phase)
0.6988 Remote Similarity NPD5124 Phase 1
0.6988 Remote Similarity NPD1899 Clinical (unspecified phase)
0.6982 Remote Similarity NPD2346 Discontinued
0.6982 Remote Similarity NPD2344 Approved
0.6981 Remote Similarity NPD1547 Clinical (unspecified phase)
0.6978 Remote Similarity NPD5710 Approved
0.6978 Remote Similarity NPD5711 Approved
0.697 Remote Similarity NPD7680 Approved
0.6964 Remote Similarity NPD1509 Clinical (unspecified phase)
0.6964 Remote Similarity NPD2799 Discontinued
0.6943 Remote Similarity NPD1548 Phase 1
0.6937 Remote Similarity NPD9269 Phase 2
0.6932 Remote Similarity NPD5808 Clinical (unspecified phase)
0.6928 Remote Similarity NPD4060 Phase 1
0.6919 Remote Similarity NPD2163 Approved
0.6911 Remote Similarity NPD6841 Approved
0.6911 Remote Similarity NPD6842 Approved
0.6911 Remote Similarity NPD6843 Phase 3
0.6909 Remote Similarity NPD3268 Approved
0.69 Remote Similarity NPD7211 Clinical (unspecified phase)

  Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data