Structure

Physi-Chem Properties

MedChem Properties

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

ADMET: Distribution

ADMET: Metabolism

ADMET: Excretion

ADMET: Toxicity

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Similar NPs/Drugs  

  Natural Product: NPC70624

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference

☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  NP Quantity Composition/Concentration

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference

☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT2 Others Unspecified Potency n.a. 2753.9 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 48972.2 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 19496.2 nM PubChem BioAssay data set

☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

  Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC70624 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9684 High Similarity NPC188895
0.9681 High Similarity NPC203925
0.9677 High Similarity NPC276775
0.9677 High Similarity NPC249912
0.9677 High Similarity NPC92754
0.9574 High Similarity NPC225060
0.9574 High Similarity NPC78701
0.9574 High Similarity NPC35448
0.9474 High Similarity NPC146351
0.9462 High Similarity NPC130398
0.9271 High Similarity NPC118343
0.9184 High Similarity NPC301943
0.9184 High Similarity NPC474365
0.9175 High Similarity NPC42211
0.9072 High Similarity NPC325497
0.8925 High Similarity NPC173443
0.8911 High Similarity NPC119271
0.8866 High Similarity NPC253423
0.8824 High Similarity NPC56493
0.8812 High Similarity NPC269457
0.88 High Similarity NPC89886
0.8762 High Similarity NPC128368
0.8738 High Similarity NPC265407
0.8738 High Similarity NPC83628
0.8738 High Similarity NPC474364
0.8738 High Similarity NPC469636
0.8738 High Similarity NPC17417
0.8738 High Similarity NPC10251
0.8713 High Similarity NPC31786
0.871 High Similarity NPC89377
0.8687 High Similarity NPC217621
0.8654 High Similarity NPC93084
0.8654 High Similarity NPC251854
0.8654 High Similarity NPC174099
0.8654 High Similarity NPC214067
0.8654 High Similarity NPC196246
0.8627 High Similarity NPC209632
0.8614 High Similarity NPC60679
0.8602 High Similarity NPC318107
0.8571 High Similarity NPC1082
0.8571 High Similarity NPC260818
0.8571 High Similarity NPC210089
0.8571 High Similarity NPC305912
0.8571 High Similarity NPC61944
0.8571 High Similarity NPC474157
0.8571 High Similarity NPC476003
0.8544 High Similarity NPC37622
0.8544 High Similarity NPC30594
0.8529 High Similarity NPC114594
0.8526 High Similarity NPC220893
0.8515 High Similarity NPC25458
0.8515 High Similarity NPC304873
0.8515 High Similarity NPC45613
0.8505 High Similarity NPC307651
0.8495 Intermediate Similarity NPC58616
0.8491 Intermediate Similarity NPC82899
0.8491 Intermediate Similarity NPC270699
0.8491 Intermediate Similarity NPC321852
0.8411 Intermediate Similarity NPC161611
0.8411 Intermediate Similarity NPC272524
0.8396 Intermediate Similarity NPC167504
0.8381 Intermediate Similarity NPC99846
0.8381 Intermediate Similarity NPC85493
0.8381 Intermediate Similarity NPC269023
0.8367 Intermediate Similarity NPC261181
0.8351 Intermediate Similarity NPC119631
0.8349 Intermediate Similarity NPC149691
0.8333 Intermediate Similarity NPC308744
0.8333 Intermediate Similarity NPC153053
0.8333 Intermediate Similarity NPC474363
0.8318 Intermediate Similarity NPC79496
0.8318 Intermediate Similarity NPC158282
0.8318 Intermediate Similarity NPC474314
0.83 Intermediate Similarity NPC270654
0.8298 Intermediate Similarity NPC294134
0.8269 Intermediate Similarity NPC105899
0.8257 Intermediate Similarity NPC474685
0.8257 Intermediate Similarity NPC210092
0.8247 Intermediate Similarity NPC62765
0.8241 Intermediate Similarity NPC474176
0.8235 Intermediate Similarity NPC473325
0.8229 Intermediate Similarity NPC304760
0.8218 Intermediate Similarity NPC229242
0.8172 Intermediate Similarity NPC106313
0.8113 Intermediate Similarity NPC249811
0.8091 Intermediate Similarity NPC81808
0.8091 Intermediate Similarity NPC306740
0.8091 Intermediate Similarity NPC474095
0.8087 Intermediate Similarity NPC472703
0.8085 Intermediate Similarity NPC288903
0.8036 Intermediate Similarity NPC45104
0.8036 Intermediate Similarity NPC228318
0.8036 Intermediate Similarity NPC217423
0.8018 Intermediate Similarity NPC135730
0.8018 Intermediate Similarity NPC100353
0.8017 Intermediate Similarity NPC472704
0.8 Intermediate Similarity NPC477411
0.8 Intermediate Similarity NPC196075
0.8 Intermediate Similarity NPC237366
0.7982 Intermediate Similarity NPC473243
0.7965 Intermediate Similarity NPC94298
0.7965 Intermediate Similarity NPC27633
0.7965 Intermediate Similarity NPC94637
0.7913 Intermediate Similarity NPC50872
0.7909 Intermediate Similarity NPC13784
0.7905 Intermediate Similarity NPC234305
0.7905 Intermediate Similarity NPC255676
0.7895 Intermediate Similarity NPC328459
0.7895 Intermediate Similarity NPC90522
0.789 Intermediate Similarity NPC243355
0.7879 Intermediate Similarity NPC240108
0.7879 Intermediate Similarity NPC213156
0.7876 Intermediate Similarity NPC240664
0.7876 Intermediate Similarity NPC469574
0.787 Intermediate Similarity NPC318327
0.7857 Intermediate Similarity NPC226093
0.7857 Intermediate Similarity NPC188907
0.7857 Intermediate Similarity NPC220540
0.7849 Intermediate Similarity NPC78517
0.7849 Intermediate Similarity NPC167577
0.783 Intermediate Similarity NPC85977
0.7826 Intermediate Similarity NPC72977
0.7818 Intermediate Similarity NPC212415
0.7818 Intermediate Similarity NPC66208
0.7818 Intermediate Similarity NPC54626
0.7815 Intermediate Similarity NPC472706
0.781 Intermediate Similarity NPC284477
0.7789 Intermediate Similarity NPC323103
0.7788 Intermediate Similarity NPC128825
0.7788 Intermediate Similarity NPC98911
0.7788 Intermediate Similarity NPC472318
0.7788 Intermediate Similarity NPC228435
0.7788 Intermediate Similarity NPC131192
0.7778 Intermediate Similarity NPC470391
0.7778 Intermediate Similarity NPC9822
0.7768 Intermediate Similarity NPC228936
0.7766 Intermediate Similarity NPC121800
0.7759 Intermediate Similarity NPC144547
0.775 Intermediate Similarity NPC472707
0.7742 Intermediate Similarity NPC176228
0.7736 Intermediate Similarity NPC160382
0.7731 Intermediate Similarity NPC470765
0.7723 Intermediate Similarity NPC77273
0.7714 Intermediate Similarity NPC282895
0.7712 Intermediate Similarity NPC228739
0.7708 Intermediate Similarity NPC270507
0.77 Intermediate Similarity NPC185501
0.7692 Intermediate Similarity NPC26285
0.7685 Intermediate Similarity NPC1065
0.7684 Intermediate Similarity NPC89950
0.7684 Intermediate Similarity NPC303245
0.7684 Intermediate Similarity NPC100039
0.7679 Intermediate Similarity NPC53953
0.7672 Intermediate Similarity NPC988
0.7672 Intermediate Similarity NPC230951
0.7672 Intermediate Similarity NPC233282
0.7672 Intermediate Similarity NPC289432
0.7667 Intermediate Similarity NPC473220
0.7667 Intermediate Similarity NPC470753
0.766 Intermediate Similarity NPC170484
0.7658 Intermediate Similarity NPC23332
0.7658 Intermediate Similarity NPC57879
0.7652 Intermediate Similarity NPC171023
0.7647 Intermediate Similarity NPC246166
0.7647 Intermediate Similarity NPC125053
0.7647 Intermediate Similarity NPC295664
0.7634 Intermediate Similarity NPC3672
0.7634 Intermediate Similarity NPC287790
0.7632 Intermediate Similarity NPC470860
0.7627 Intermediate Similarity NPC223351
0.7627 Intermediate Similarity NPC69403
0.7627 Intermediate Similarity NPC291189
0.7624 Intermediate Similarity NPC110704
0.7611 Intermediate Similarity NPC186933
0.7611 Intermediate Similarity NPC252004
0.7604 Intermediate Similarity NPC103387
0.7596 Intermediate Similarity NPC325499
0.7586 Intermediate Similarity NPC137710
0.7586 Intermediate Similarity NPC61779
0.7586 Intermediate Similarity NPC204784
0.7586 Intermediate Similarity NPC472708
0.7583 Intermediate Similarity NPC476599
0.7583 Intermediate Similarity NPC275576
0.7576 Intermediate Similarity NPC96625
0.7573 Intermediate Similarity NPC5472
0.757 Intermediate Similarity NPC179686
0.7568 Intermediate Similarity NPC183648
0.7565 Intermediate Similarity NPC45794
0.7545 Intermediate Similarity NPC281604
0.7527 Intermediate Similarity NPC175393
0.7526 Intermediate Similarity NPC197581
0.7526 Intermediate Similarity NPC127491
0.7526 Intermediate Similarity NPC308619
0.7526 Intermediate Similarity NPC285773
0.7526 Intermediate Similarity NPC324835
0.7525 Intermediate Similarity NPC274455
0.7525 Intermediate Similarity NPC86670
0.7525 Intermediate Similarity NPC70940
0.7524 Intermediate Similarity NPC175852
0.7524 Intermediate Similarity NPC160548

  Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC70624 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.9271 High Similarity NPD1238 Approved
0.8738 High Similarity NPD2182 Approved
0.8713 High Similarity NPD164 Approved
0.8602 High Similarity NPD9259 Approved
0.8602 High Similarity NPD9257 Approved
0.8571 High Similarity NPD2181 Clinical (unspecified phase)
0.8367 Intermediate Similarity NPD1202 Approved
0.8247 Intermediate Similarity NPD9256 Approved
0.8247 Intermediate Similarity NPD9258 Approved
0.8 Intermediate Similarity NPD6287 Discontinued
0.7965 Intermediate Similarity NPD9545 Approved
0.7921 Intermediate Similarity NPD9260 Approved
0.7843 Intermediate Similarity NPD1989 Approved
0.7818 Intermediate Similarity NPD1609 Clinical (unspecified phase)
0.7788 Intermediate Similarity NPD9493 Approved
0.7755 Intermediate Similarity NPD1087 Approved
0.766 Intermediate Similarity NPD9490 Approved
0.7658 Intermediate Similarity NPD9508 Approved
0.7623 Intermediate Similarity NPD5952 Clinical (unspecified phase)
0.7611 Intermediate Similarity NPD5951 Approved
0.7611 Intermediate Similarity NPD690 Clinical (unspecified phase)
0.76 Intermediate Similarity NPD800 Approved
0.7553 Intermediate Similarity NPD225 Approved
0.7553 Intermediate Similarity NPD227 Approved
0.7545 Intermediate Similarity NPD6831 Clinical (unspecified phase)
0.7526 Intermediate Similarity NPD9491 Approved
0.7525 Intermediate Similarity NPD1089 Approved
0.7525 Intermediate Similarity NPD1090 Approved
0.7525 Intermediate Similarity NPD1086 Approved
0.7524 Intermediate Similarity NPD9495 Approved
0.7522 Intermediate Similarity NPD1241 Discontinued
0.7521 Intermediate Similarity NPD3412 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD2199 Approved
0.75 Intermediate Similarity NPD1237 Approved
0.75 Intermediate Similarity NPD2198 Approved
0.748 Intermediate Similarity NPD7008 Discontinued
0.7477 Intermediate Similarity NPD2067 Discontinued
0.7453 Intermediate Similarity NPD2066 Phase 3
0.7438 Intermediate Similarity NPD553 Approved
0.7438 Intermediate Similarity NPD552 Approved
0.7438 Intermediate Similarity NPD9567 Approved
0.7407 Intermediate Similarity NPD1931 Clinical (unspecified phase)
0.7407 Intermediate Similarity NPD1929 Approved
0.7407 Intermediate Similarity NPD1930 Approved
0.7407 Intermediate Similarity NPD9261 Approved
0.74 Intermediate Similarity NPD1282 Approved
0.7395 Intermediate Similarity NPD518 Clinical (unspecified phase)
0.7379 Intermediate Similarity NPD1088 Approved
0.7377 Intermediate Similarity NPD1019 Discontinued
0.7364 Intermediate Similarity NPD3134 Approved
0.7353 Intermediate Similarity NPD3672 Approved
0.7353 Intermediate Similarity NPD3673 Approved
0.7333 Intermediate Similarity NPD9717 Approved
0.732 Intermediate Similarity NPD226 Approved
0.7315 Intermediate Similarity NPD1932 Approved
0.7308 Intermediate Similarity NPD1563 Approved
0.7297 Intermediate Similarity NPD1358 Approved
0.7282 Intermediate Similarity NPD1239 Approved
0.7281 Intermediate Similarity NPD5277 Phase 2
0.7258 Intermediate Similarity NPD6832 Phase 2
0.7238 Intermediate Similarity NPD1693 Approved
0.7227 Intermediate Similarity NPD1362 Clinical (unspecified phase)
0.7227 Intermediate Similarity NPD7163 Clinical (unspecified phase)
0.719 Intermediate Similarity NPD3972 Approved
0.7188 Intermediate Similarity NPD3528 Clinical (unspecified phase)
0.7182 Intermediate Similarity NPD5909 Discontinued
0.7165 Intermediate Similarity NPD4307 Phase 2
0.7155 Intermediate Similarity NPD2629 Approved
0.7143 Intermediate Similarity NPD9264 Approved
0.7143 Intermediate Similarity NPD9265 Clinical (unspecified phase)
0.7143 Intermediate Similarity NPD9267 Approved
0.7143 Intermediate Similarity NPD411 Approved
0.7143 Intermediate Similarity NPD9263 Approved
0.7119 Intermediate Similarity NPD2347 Approved
0.7109 Intermediate Similarity NPD1899 Clinical (unspecified phase)
0.7107 Intermediate Similarity NPD1547 Clinical (unspecified phase)
0.7107 Intermediate Similarity NPD1281 Approved
0.7103 Intermediate Similarity NPD1566 Phase 3
0.7103 Intermediate Similarity NPD1565 Approved
0.7103 Intermediate Similarity NPD1564 Approved
0.7094 Intermediate Similarity NPD4198 Discontinued
0.7091 Intermediate Similarity NPD6647 Phase 2
0.7083 Intermediate Similarity NPD1778 Approved
0.708 Intermediate Similarity NPD9266 Approved
0.708 Intermediate Similarity NPD74 Approved
0.708 Intermediate Similarity NPD2329 Discontinued
0.7037 Intermediate Similarity NPD5926 Approved
0.7031 Intermediate Similarity NPD3373 Approved
0.7025 Intermediate Similarity NPD7457 Clinical (unspecified phase)
0.7025 Intermediate Similarity NPD1889 Phase 1
0.7023 Intermediate Similarity NPD1551 Phase 2
0.7018 Intermediate Similarity NPD1317 Discontinued
0.7016 Intermediate Similarity NPD1203 Approved
0.7 Intermediate Similarity NPD5691 Approved
0.6992 Remote Similarity NPD182 Clinical (unspecified phase)
0.6977 Remote Similarity NPD230 Phase 1
0.697 Remote Similarity NPD7702 Clinical (unspecified phase)
0.6964 Remote Similarity NPD9697 Approved
0.6953 Remote Similarity NPD7713 Phase 3
0.6947 Remote Similarity NPD4308 Phase 3
0.6942 Remote Similarity NPD17 Approved
0.694 Remote Similarity NPD4628 Phase 3
0.6935 Remote Similarity NPD1283 Approved
0.6935 Remote Similarity NPD1876 Approved
0.6923 Remote Similarity NPD689 Discontinued
0.6917 Remote Similarity NPD1894 Discontinued
0.6916 Remote Similarity NPD688 Clinical (unspecified phase)
0.6897 Remote Similarity NPD969 Suspended
0.6893 Remote Similarity NPD650 Approved
0.6875 Remote Similarity NPD3764 Approved
0.6875 Remote Similarity NPD9716 Approved
0.6875 Remote Similarity NPD2313 Discontinued
0.687 Remote Similarity NPD2567 Approved
0.687 Remote Similarity NPD2569 Approved
0.687 Remote Similarity NPD2670 Approved
0.686 Remote Similarity NPD5585 Approved
0.6846 Remote Similarity NPD447 Suspended
0.6846 Remote Similarity NPD1933 Approved
0.6842 Remote Similarity NPD2343 Clinical (unspecified phase)
0.6842 Remote Similarity NPD2346 Discontinued
0.6825 Remote Similarity NPD2798 Approved
0.6825 Remote Similarity NPD6007 Clinical (unspecified phase)
0.6822 Remote Similarity NPD5122 Clinical (unspecified phase)
0.6818 Remote Similarity NPD1110 Approved
0.6818 Remote Similarity NPD3170 Approved
0.6818 Remote Similarity NPD7798 Approved
0.6818 Remote Similarity NPD1109 Approved
0.681 Remote Similarity NPD4141 Clinical (unspecified phase)
0.6803 Remote Similarity NPD1104 Approved
0.68 Remote Similarity NPD5667 Approved
0.68 Remote Similarity NPD1888 Phase 1
0.68 Remote Similarity NPD942 Approved
0.6797 Remote Similarity NPD6039 Approved
0.6794 Remote Similarity NPD1654 Clinical (unspecified phase)
0.6774 Remote Similarity NPD1608 Approved
0.6772 Remote Similarity NPD9494 Approved
0.6769 Remote Similarity NPD2979 Phase 3
0.6762 Remote Similarity NPD5346 Phase 2
0.6762 Remote Similarity NPD5347 Phase 2
0.6735 Remote Similarity NPD9294 Approved
0.6731 Remote Similarity NPD4793 Discontinued
0.6724 Remote Similarity NPD1756 Approved
0.6724 Remote Similarity NPD4233 Approved
0.6724 Remote Similarity NPD4234 Approved
0.6724 Remote Similarity NPD5237 Approved
0.6724 Remote Similarity NPD5239 Approved
0.6724 Remote Similarity NPD5235 Approved
0.6724 Remote Similarity NPD5236 Approved
0.6724 Remote Similarity NPD1752 Approved
0.6724 Remote Similarity NPD5240 Approved
0.6723 Remote Similarity NPD9281 Approved
0.6721 Remote Similarity NPD1651 Approved
0.6715 Remote Similarity NPD7236 Approved
0.6695 Remote Similarity NPD6858 Approved
0.6695 Remote Similarity NPD7094 Approved
0.6692 Remote Similarity NPD2799 Discontinued
0.6691 Remote Similarity NPD7003 Approved
0.6667 Remote Similarity NPD5305 Approved
0.6667 Remote Similarity NPD4626 Approved
0.6667 Remote Similarity NPD2201 Approved
0.6667 Remote Similarity NPD5306 Approved
0.6667 Remote Similarity NPD6966 Discovery
0.6642 Remote Similarity NPD2935 Discontinued
0.6641 Remote Similarity NPD3142 Approved
0.6641 Remote Similarity NPD3140 Approved
0.664 Remote Similarity NPD6637 Approved
0.6636 Remote Similarity NPD7609 Phase 3
0.6618 Remote Similarity NPD7421 Clinical (unspecified phase)
0.6615 Remote Similarity NPD9471 Clinical (unspecified phase)
0.6614 Remote Similarity NPD3266 Approved
0.6614 Remote Similarity NPD2797 Approved
0.6614 Remote Similarity NPD3267 Approved
0.6613 Remote Similarity NPD4106 Approved
0.6613 Remote Similarity NPD4136 Approved
0.6613 Remote Similarity NPD4135 Approved
0.6613 Remote Similarity NPD3496 Discontinued
0.6612 Remote Similarity NPD694 Clinical (unspecified phase)
0.6596 Remote Similarity NPD7239 Suspended
0.6587 Remote Similarity NPD4359 Approved
0.6585 Remote Similarity NPD1245 Approved
0.6583 Remote Similarity NPD4766 Approved
0.6583 Remote Similarity NPD1246 Approved
0.6581 Remote Similarity NPD3646 Clinical (unspecified phase)
0.6574 Remote Similarity NPD7631 Approved
0.6571 Remote Similarity NPD6273 Approved
0.6571 Remote Similarity NPD506 Clinical (unspecified phase)
0.6569 Remote Similarity NPD1878 Clinical (unspecified phase)
0.6567 Remote Similarity NPD3748 Approved
0.6565 Remote Similarity NPD520 Approved
0.6562 Remote Similarity NPD5740 Clinical (unspecified phase)
0.6562 Remote Similarity NPD6085 Phase 2
0.656 Remote Similarity NPD4807 Approved
0.656 Remote Similarity NPD4806 Approved
0.6555 Remote Similarity NPD2607 Approved
0.6555 Remote Similarity NPD1279 Clinical (unspecified phase)
0.6549 Remote Similarity NPD6591 Clinical (unspecified phase)
0.6544 Remote Similarity NPD6414 Clinical (unspecified phase)
0.6541 Remote Similarity NPD1607 Approved
0.6538 Remote Similarity NPD5454 Clinical (unspecified phase)
0.6522 Remote Similarity NPD3887 Approved

  Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data