Structure

Physi-Chem Properties

Molecular Weight:  291.1
Volume:  264.765
LogP:  -1.689
LogD:  -0.946
LogS:  -1.039
# Rotatable Bonds:  2
TPSA:  151.17
# H-Bond Aceptor:  9
# H-Bond Donor:  5
# Rings:  3
# Heavy Atoms:  9

MedChem Properties

QED Drug-Likeness Score:  0.446
Synthetic Accessibility Score:  4.385
Fsp3:  0.417
Lipinski Rule-of-5:  Accepted
Pfizer Rule:  Accepted
GSK Rule:  Accepted
BMS Rule:  0
Golden Triangle Rule:  Accepted
Chelating Alert:  0
PAINS Alert:  0

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

Caco-2 Permeability:  -5.698
MDCK Permeability:  4.1460793909209315e-06
Pgp-inhibitor:  0.002
Pgp-substrate:  0.908
Human Intestinal Absorption (HIA):  0.952
20% Bioavailability (F20%):  0.78
30% Bioavailability (F30%):  0.973

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):  0.425
Plasma Protein Binding (PPB):  17.722766876220703%
Volume Distribution (VD):  1.05
Pgp-substrate:  75.69740295410156%

ADMET: Metabolism

CYP1A2-inhibitor:  0.127
CYP1A2-substrate:  0.559
CYP2C19-inhibitor:  0.074
CYP2C19-substrate:  0.064
CYP2C9-inhibitor:  0.01
CYP2C9-substrate:  0.101
CYP2D6-inhibitor:  0.019
CYP2D6-substrate:  0.086
CYP3A4-inhibitor:  0.017
CYP3A4-substrate:  0.055

ADMET: Excretion

Clearance (CL):  4.703
Half-life (T1/2):  0.912

ADMET: Toxicity

hERG Blockers:  0.034
Human Hepatotoxicity (H-HT):  0.949
Drug-inuced Liver Injury (DILI):  0.977
AMES Toxicity:  0.271
Rat Oral Acute Toxicity:  0.445
Maximum Recommended Daily Dose:  0.078
Skin Sensitization:  0.099
Carcinogencity:  0.15
Eye Corrosion:  0.003
Eye Irritation:  0.037
Respiratory Toxicity:  0.192

Download Data

Data Type Select
General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs  

  Natural Product: NPC33382

Natural Product ID:  NPC33382
Common Name*:   Toyocamycin
IUPAC Name:   4-amino-7-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrrolo[2,3-d]pyrimidine-5-carbonitrile
Synonyms:  
Standard InCHIKey:  XOKJUSAYZUAMGJ-WOUKDFQISA-N
Standard InCHI:  InChI=1S/C12H13N5O4/c13-1-5-2-17(11-7(5)10(14)15-4-16-11)12-9(20)8(19)6(3-18)21-12/h2,4,6,8-9,12,18-20H,3H2,(H2,14,15,16)/t6-,8-,9-,12-/m1/s1
SMILES:  C(#N)c1cn(c2c1c(N)ncn2)[C@H]1[C@@H]([C@@H]([C@@H](CO)O1)O)O
Synthetic Gene Cluster:   BGC0000879;BGC0000881;
ChEMBL Identifier:   CHEMBL99668
PubChem CID:   11824
Chemical Classification**:  
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0000289] Nucleosides, nucleotides, and analogues
      • [CHEMONTID:0002306] Pyrrolopyrimidine nucleosides and nucleotides

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO11484 Jaspis splendens Species Ancorinidae Eukaryota n.a. n.a. n.a. DOI[10.1016/j.tet.2007.03.162]
NPO11484 Jaspis splendens Species Ancorinidae Eukaryota n.a. n.a. n.a. DOI[10.1016/j.tet.2008.05.037]
NPO11484 Jaspis splendens Species Ancorinidae Eukaryota n.a. n.a. n.a. DOI[10.1016/j.tet.2008.10.076]
NPO11484 Jaspis splendens Species Ancorinidae Eukaryota n.a. n.a. n.a. PMID[10075778]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10344559]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10344578]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10348041]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10604756]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10695669]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10724004]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10994816]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[11099231]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[11132958]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[11374972]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[11473415]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[14738393]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. Australian n.a. PMID[15497950]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[15813185]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[15844966]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[15974616]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[16180833]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[1666120]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[16724845]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[16830891]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[16872146]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17125235]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17315965]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17551212]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17608531]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17844998]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17887721]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17917237]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18044841]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. Indonesian n.a. PMID[18081255]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18081255]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18205372]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. Northwest Territories, Canada 1995 PMID[18327911]
NPO32842 jaspis spp. Species Ancorinidae Eukaryota n.a. east coast of Malaysia 1994 PMID[18327911]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18327911]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18666798]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18776684]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[19007176]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[19129624]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[19191549]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[19856955]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[19883065]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[20092333]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[20545334]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[20836523]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21028889]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21028891]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. mycelium n.a. PMID[21090727]
NPO11484 Jaspis splendens Species Ancorinidae Eukaryota n.a. Fiji (S 1822.28', E 17758.87') 2000-FEB PMID[21241058]
NPO11484 Jaspis splendens Species Ancorinidae Eukaryota n.a. n.a. n.a. PMID[21241058]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21314175]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. mycelium n.a. PMID[21639131]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21728289]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. latex n.a. PMID[21751787]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21807523]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21873059]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. latex n.a. PMID[21879726]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. mycelium n.a. PMID[22145663]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[22574670]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[22583058]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[22591466]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[22758660]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[22775474]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[23387796]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[23662937]
NPO18708 Streptomyces diastatochromogenes Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[23775805]
NPO33669 Jaspis johnstoni Species Ancorinidae Eukaryota n.a. n.a. n.a. PMID[24020843]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[24592993]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[24754815]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[24878306]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[24964393]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25211234]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25455147]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25495422]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25537064]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25918793]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25934225]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[26035239]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[26465675]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[26798949]
NPO11484 Jaspis splendens Species Ancorinidae Eukaryota n.a. n.a. n.a. PMID[26883470]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[26905826]
NPO33669 Jaspis johnstoni Species Ancorinidae Eukaryota n.a. n.a. n.a. PMID[2693614]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[31013087]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[31298537]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[31894983]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[32298122]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[8501018]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. mycelium n.a. PMID[8784423]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[8931733]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[8982334]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9031666]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9031676]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9066767]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9066768]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9186568]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9531983]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. mycelium n.a. PMID[9711246]
NPO18708 Streptomyces diastatochromogenes Species Streptomycetaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO11484 Jaspis splendens Species Ancorinidae Eukaryota n.a. n.a. n.a. Database[UNPD]

☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  NP Quantity Composition/Concentration

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference

☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT165 Cell Line HeLa Homo sapiens MCC > 0.4 ug.mL-1 PMID[521824]
NPT189 Cell Line Vero Chlorocebus aethiops MCC = 0.04 ug.mL-1 PMID[521824]
NPT137 Cell Line L1210 Mus musculus ID50 = 0.006 ug ml-1 PMID[521824]
NPT165 Cell Line HeLa Homo sapiens MTC = 0.4 ug ml-1 PMID[521825]
NPT189 Cell Line Vero Chlorocebus aethiops MTC = 0.04 ug ml-1 PMID[521825]
NPT137 Cell Line L1210 Mus musculus MIC50 = 0.006 ug.mL-1 PMID[521825]
NPT137 Cell Line L1210 Mus musculus MIC50 = 38.0 ug.mL-1 PMID[521825]
NPT137 Cell Line L1210 Mus musculus MIC50 = 0.071 ug.mL-1 PMID[521825]
NPT137 Cell Line L1210 Mus musculus MIC50 = 0.039 ug.mL-1 PMID[521825]
NPT2603 Individual Protein Adenosine kinase Homo sapiens IC50 = 310.0 nM PMID[521826]
NPT2603 Individual Protein Adenosine kinase Homo sapiens IC50 = 3228494121.71 nM PMID[521826]
NPT319 Cell Line B16 Mus musculus EC50 = 5.0 nM PMID[521827]
NPT859 Cell Line HFF Homo sapiens IC50 = 8000.0 nM PMID[521828]
NPT859 Cell Line HFF Homo sapiens IC50 < 10.0 nM PMID[521829]
NPT91 Cell Line KB Homo sapiens IC50 = 30.0 nM PMID[521829]
NPT137 Cell Line L1210 Mus musculus IC50 = 4.0 nM PMID[521830]
NPT2603 Individual Protein Adenosine kinase Homo sapiens IC50 = 3235936569.3 nM PMID[521831]
NPT859 Cell Line HFF Homo sapiens IC50 = 30.0 nM PMID[521832]
NPT91 Cell Line KB Homo sapiens IC50 = 30.0 nM PMID[521832]
NPT137 Cell Line L1210 Mus musculus IC50 = 4.0 nM PMID[521832]
NPT859 Cell Line HFF Homo sapiens IC50 = 8000.0 nM PMID[521833]
NPT91 Cell Line KB Homo sapiens IC50 = 17000.0 nM PMID[521833]
NPT859 Cell Line HFF Homo sapiens IC50 = 300.0 nM PMID[521834]
NPT91 Cell Line KB Homo sapiens IC50 = 100.0 nM PMID[521834]
NPT137 Cell Line L1210 Mus musculus IC50 = 100.0 nM PMID[521834]
NPT2603 Individual Protein Adenosine kinase Homo sapiens IC50 = 310.0 nM PMID[521835]
NPT168 Cell Line P388 Mus musculus Activity = 0.0023 ug ml-1 PMID[521836]
NPT2603 Individual Protein Adenosine kinase Homo sapiens log(10'3/IC50) = 3.51 n.a. PMID[521838]
NPT137 Cell Line L1210 Mus musculus IC50 = 0.0026 ug.mL-1 PMID[521839]
NPT2604 Individual Protein Heat shock cognate 71 kDa protein Homo sapiens Kd = 91201.08 nM PMID[521843]
NPT2604 Individual Protein Heat shock cognate 71 kDa protein Homo sapiens Kd = 90000.0 nM PMID[521843]
NPT6098 Individual Protein Histone-lysine N-methyltransferase, H3 lysine-79 specific Homo sapiens IC50 = 44000.0 nM PMID[521845]
NPT195 Organism Vesicular stomatitis virus Vesicular stomatitis virus MIC = 0.07 ug.mL-1 PMID[521824]
NPT335 Organism Human coxsackievirus B4 Human coxsackievirus B4 MIC > 0.01 ug.mL-1 PMID[521824]
NPT1106 Organism Human poliovirus 1 Human poliovirus 1 MIC > 0.01 ug.mL-1 PMID[521824]
NPT3878 Organism Mammalian orthoreovirus 1 Mammalian orthoreovirus 1 MIC > 0.01 ug.mL-1 PMID[521824]
NPT336 Organism Human parainfluenza virus 3 Human parainfluenza virus 3 MIC > 0.01 ug.mL-1 PMID[521824]
NPT338 Organism Sindbis virus Sindbis virus MIC > 0.01 ug.mL-1 PMID[521824]
NPT419 Organism Oryctolagus cuniculus Oryctolagus cuniculus MCC > 0.04 ug.mL-1 PMID[521824]
NPT190 Organism Human herpesvirus 1 Human herpesvirus 1 MIC > 0.04 ug.mL-1 PMID[521824]
NPT1141 Organism Human herpesvirus 2 Human herpesvirus 2 MIC = 0.07 ug.mL-1 PMID[521824]
NPT334 Organism Vaccinia virus Vaccinia virus MIC > 0.01 ug.mL-1 PMID[521824]
NPT195 Organism Vesicular stomatitis virus Vesicular stomatitis virus MIC > 1.0 ug.mL-1 PMID[521824]
NPT419 Organism Oryctolagus cuniculus Oryctolagus cuniculus MTC = 0.04 ug ml-1 PMID[521825]
NPT190 Organism Human herpesvirus 1 Human herpesvirus 1 MIC50 > 0.04 ug.mL-1 PMID[521825]
NPT1141 Organism Human herpesvirus 2 Human herpesvirus 2 MIC50 > 0.04 ug.mL-1 PMID[521825]
NPT334 Organism Vaccinia virus Vaccinia virus MIC50 > 0.04 ug.mL-1 PMID[521825]
NPT195 Organism Vesicular stomatitis virus Vesicular stomatitis virus MIC50 > 0.04 ug.mL-1 PMID[521825]
NPT195 Organism Vesicular stomatitis virus Vesicular stomatitis virus MIC50 = 0.07 ug.mL-1 PMID[521825]
NPT335 Organism Human coxsackievirus B4 Human coxsackievirus B4 MIC50 > 0.4 ug.mL-1 PMID[521825]
NPT1106 Organism Human poliovirus 1 Human poliovirus 1 MIC50 > 0.4 ug.mL-1 PMID[521825]
NPT3878 Organism Mammalian orthoreovirus 1 Mammalian orthoreovirus 1 MIC50 > 0.04 ug.mL-1 PMID[521825]
NPT336 Organism Human parainfluenza virus 3 Human parainfluenza virus 3 MIC50 > 0.04 ug.mL-1 PMID[521825]
NPT338 Organism Sindbis virus Sindbis virus MIC50 > 0.04 ug.mL-1 PMID[521825]
NPT335 Organism Human coxsackievirus B4 Human coxsackievirus B4 MIC50 > 0.04 ug.mL-1 PMID[521825]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. EC50 = 12.0 nM PMID[521827]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. EC50 = 4.0 nM PMID[521827]
NPT1750 Organism Human herpesvirus 5 Human herpesvirus 5 IC50 = 1700.0 nM PMID[521828]
NPT1750 Organism Human herpesvirus 5 Human herpesvirus 5 IC90 = 14000.0 nM PMID[521828]
NPT190 Organism Human herpesvirus 1 Human herpesvirus 1 IC50 = 29000.0 nM PMID[521828]
NPT190 Organism Human herpesvirus 1 Human herpesvirus 1 IC90 = 3500.0 nM PMID[521828]
NPT27 Others Unspecified IC50 = 46000.0 nM PMID[521828]
NPT27 Others Unspecified IC50 = 17000.0 nM PMID[521828]
NPT1750 Organism Human herpesvirus 5 Human herpesvirus 5 IC50 = 50.0 nM PMID[521829]
NPT1750 Organism Human herpesvirus 5 Human herpesvirus 5 IC50 = 50.0 nM PMID[521830]
NPT27 Others Unspecified IC50 = 30.0 nM PMID[521830]
NPT27 Others Unspecified IC50 = 40.0 nM PMID[521830]
NPT1750 Organism Human herpesvirus 5 Human herpesvirus 5 IC50 = 100.0 nM PMID[521832]
NPT1750 Organism Human herpesvirus 5 Human herpesvirus 5 IC50 = 1700.0 nM PMID[521833]
NPT190 Organism Human herpesvirus 1 Human herpesvirus 1 IC50 = 29000.0 nM PMID[521833]
NPT1750 Organism Human herpesvirus 5 Human herpesvirus 5 IC90 = 14000.0 nM PMID[521833]
NPT1750 Organism Human herpesvirus 5 Human herpesvirus 5 IC50 = 300.0 nM PMID[521834]
NPT190 Organism Human herpesvirus 1 Human herpesvirus 1 IC50 = 400.0 nM PMID[521834]
NPT1750 Organism Human herpesvirus 5 Human herpesvirus 5 IC90 = 300.0 nM PMID[521834]
NPT2 Others Unspecified IC50 = 3.3 ug.mL-1 PMID[521837]
NPT20 Organism Candida albicans Candida albicans IZ = 13.0 mm PMID[521839]
NPT1047 Organism Simplexvirus Simplexvirus IC50 = 38000.0 nM PMID[521841]
NPT20555 ORGANISM SARS-CoV-2 Severe acute respiratory syndrome coronavirus 2 Inhibition = 13.77 % PMID[521844]
NPT20556 SINGLE PROTEIN Replicase polyprotein 1ab Severe acute respiratory syndrome coronavirus 2 Inhibition = 14.22 % PMID[521846]
NPT20555 ORGANISM SARS-CoV-2 Severe acute respiratory syndrome coronavirus 2 Inhibition = 11.99 % PMID[521847]

☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

  Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC33382 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9177 High Similarity NPC222174
0.9172 High Similarity NPC125659
0.9172 High Similarity NPC168702
0.7516 Intermediate Similarity NPC21448
0.7516 Intermediate Similarity NPC156461
0.7516 Intermediate Similarity NPC107374
0.7515 Intermediate Similarity NPC207633
0.7469 Intermediate Similarity NPC189068
0.7469 Intermediate Similarity NPC164665
0.744 Intermediate Similarity NPC239737
0.7423 Intermediate Similarity NPC269827
0.7423 Intermediate Similarity NPC219313
0.7423 Intermediate Similarity NPC309832
0.7412 Intermediate Similarity NPC321393
0.7391 Intermediate Similarity NPC229974
0.7267 Intermediate Similarity NPC161659
0.7267 Intermediate Similarity NPC209525
0.7246 Intermediate Similarity NPC185991
0.7246 Intermediate Similarity NPC85689
0.7246 Intermediate Similarity NPC211025
0.7202 Intermediate Similarity NPC472816
0.7202 Intermediate Similarity NPC321814
0.7186 Intermediate Similarity NPC150853
0.7178 Intermediate Similarity NPC314152
0.716 Intermediate Similarity NPC317821
0.716 Intermediate Similarity NPC164952
0.716 Intermediate Similarity NPC130586
0.716 Intermediate Similarity NPC212551
0.716 Intermediate Similarity NPC302778
0.7118 Intermediate Similarity NPC174802
0.7099 Intermediate Similarity NPC129756
0.7076 Intermediate Similarity NPC224076
0.7066 Intermediate Similarity NPC121222
0.7035 Intermediate Similarity NPC226245
0.7035 Intermediate Similarity NPC316618
0.6941 Remote Similarity NPC161224
0.6875 Remote Similarity NPC107160
0.6839 Remote Similarity NPC313754
0.6839 Remote Similarity NPC311197
0.6839 Remote Similarity NPC54320
0.6836 Remote Similarity NPC323091
0.6829 Remote Similarity NPC33996
0.6824 Remote Similarity NPC136349
0.681 Remote Similarity NPC320818
0.6782 Remote Similarity NPC52238
0.6705 Remote Similarity NPC328479
0.6685 Remote Similarity NPC189261
0.6648 Remote Similarity NPC93365
0.6618 Remote Similarity NPC250178
0.6575 Remote Similarity NPC261595
0.6545 Remote Similarity NPC327941
0.6541 Remote Similarity NPC326529
0.6538 Remote Similarity NPC324033
0.6538 Remote Similarity NPC321458
0.6517 Remote Similarity NPC195140
0.6505 Remote Similarity NPC324198
0.6505 Remote Similarity NPC319100
0.648 Remote Similarity NPC138018
0.6471 Remote Similarity NPC315642
0.6471 Remote Similarity NPC74306
0.6467 Remote Similarity NPC314646
0.6452 Remote Similarity NPC158055
0.6429 Remote Similarity NPC324484
0.6429 Remote Similarity NPC62151
0.6413 Remote Similarity NPC290959
0.6413 Remote Similarity NPC326082
0.6407 Remote Similarity NPC61198
0.6393 Remote Similarity NPC325906
0.6364 Remote Similarity NPC313897
0.6347 Remote Similarity NPC262926
0.6328 Remote Similarity NPC321052
0.63 Remote Similarity NPC474767
0.6289 Remote Similarity NPC313514
0.6239 Remote Similarity NPC160666
0.6239 Remote Similarity NPC21461
0.6237 Remote Similarity NPC319456
0.6235 Remote Similarity NPC30326
0.6207 Remote Similarity NPC89147
0.6207 Remote Similarity NPC274384
0.619 Remote Similarity NPC319221
0.6149 Remote Similarity NPC211820
0.6149 Remote Similarity NPC251233
0.6131 Remote Similarity NPC324009
0.6127 Remote Similarity NPC186619
0.6114 Remote Similarity NPC177169
0.6098 Remote Similarity NPC103388
0.608 Remote Similarity NPC64705
0.608 Remote Similarity NPC232408
0.6057 Remote Similarity NPC318590
0.6051 Remote Similarity NPC24589
0.6041 Remote Similarity NPC282458
0.6041 Remote Similarity NPC78941
0.6034 Remote Similarity NPC326694
0.6023 Remote Similarity NPC317746
0.6 Remote Similarity NPC276373
0.599 Remote Similarity NPC292361
0.5971 Remote Similarity NPC5802
0.5942 Remote Similarity NPC157821
0.5859 Remote Similarity NPC62510
0.5851 Remote Similarity NPC71079
0.5833 Remote Similarity NPC89562
0.582 Remote Similarity NPC474217
0.5798 Remote Similarity NPC14590
0.5789 Remote Similarity NPC85918
0.5773 Remote Similarity NPC317054
0.5771 Remote Similarity NPC75544
0.5771 Remote Similarity NPC472289
0.5759 Remote Similarity NPC127730
0.5759 Remote Similarity NPC278366
0.5736 Remote Similarity NPC317010
0.5707 Remote Similarity NPC41333
0.5676 Remote Similarity NPC130570
0.5657 Remote Similarity NPC314491
0.5635 Remote Similarity NPC197068

  Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC33382 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8841 High Similarity NPD1046 Clinical (unspecified phase)
0.8529 High Similarity NPD1063 Phase 2
0.8395 Intermediate Similarity NPD527 Clinical (unspecified phase)
0.7516 Intermediate Similarity NPD250 Approved
0.7516 Intermediate Similarity NPD249 Approved
0.7423 Intermediate Similarity NPD186 Discovery
0.7423 Intermediate Similarity NPD195 Approved
0.7407 Intermediate Similarity NPD5486 Discontinued
0.7292 Intermediate Similarity NPD5458 Discontinued
0.7246 Intermediate Similarity NPD283 Approved
0.7178 Intermediate Similarity NPD185 Approved
0.716 Intermediate Similarity NPD1369 Phase 2
0.716 Intermediate Similarity NPD242 Approved
0.716 Intermediate Similarity NPD3107 Discontinued
0.716 Intermediate Similarity NPD1750 Clinical (unspecified phase)
0.716 Intermediate Similarity NPD338 Approved
0.715 Intermediate Similarity NPD2965 Clinical (unspecified phase)
0.7118 Intermediate Similarity NPD339 Approved
0.7091 Intermediate Similarity NPD166 Approved
0.7076 Intermediate Similarity NPD169 Phase 2
0.7055 Intermediate Similarity NPD193 Suspended
0.7035 Intermediate Similarity NPD2646 Discontinued
0.7035 Intermediate Similarity NPD2624 Phase 2
0.7035 Intermediate Similarity NPD1732 Phase 3
0.7026 Intermediate Similarity NPD2876 Phase 3
0.7026 Intermediate Similarity NPD2877 Clinical (unspecified phase)
0.7011 Intermediate Similarity NPD1692 Approved
0.7006 Intermediate Similarity NPD2647 Phase 3
0.7 Intermediate Similarity NPD231 Clinical (unspecified phase)
0.7 Intermediate Similarity NPD536 Clinical (unspecified phase)
0.6954 Remote Similarity NPD2824 Phase 2
0.694 Remote Similarity NPD4716 Approved
0.6902 Remote Similarity NPD4744 Clinical (unspecified phase)
0.6839 Remote Similarity NPD219 Phase 3
0.6839 Remote Similarity NPD220 Clinical (unspecified phase)
0.6839 Remote Similarity NPD217 Approved
0.6839 Remote Similarity NPD216 Approved
0.6839 Remote Similarity NPD218 Approved
0.6824 Remote Similarity NPD548 Clinical (unspecified phase)
0.6723 Remote Similarity NPD516 Clinical (unspecified phase)
0.6721 Remote Similarity NPD5666 Phase 2
0.6667 Remote Similarity NPD214 Approved
0.6667 Remote Similarity NPD213 Clinical (unspecified phase)
0.665 Remote Similarity NPD2903 Clinical (unspecified phase)
0.665 Remote Similarity NPD2902 Phase 2
0.6648 Remote Similarity NPD546 Clinical (unspecified phase)
0.6601 Remote Similarity NPD4563 Phase 2
0.6597 Remote Similarity NPD2152 Clinical (unspecified phase)
0.6575 Remote Similarity NPD247 Clinical (unspecified phase)
0.651 Remote Similarity NPD207 Discontinued
0.6505 Remote Similarity NPD4171 Clinical (unspecified phase)
0.6503 Remote Similarity NPD9632 Phase 3
0.6502 Remote Similarity NPD6351 Discovery
0.6484 Remote Similarity NPD7988 Suspended
0.6471 Remote Similarity NPD1412 Clinical (unspecified phase)
0.6471 Remote Similarity NPD582 Approved
0.6457 Remote Similarity NPD8250 Phase 2
0.6452 Remote Similarity NPD6840 Approved
0.6407 Remote Similarity NPD252 Clinical (unspecified phase)
0.6406 Remote Similarity NPD5683 Clinical (unspecified phase)
0.6406 Remote Similarity NPD6417 Clinical (unspecified phase)
0.6406 Remote Similarity NPD5684 Clinical (unspecified phase)
0.6406 Remote Similarity NPD5682 Phase 3
0.6402 Remote Similarity NPD248 Discontinued
0.64 Remote Similarity NPD4459 Clinical (unspecified phase)
0.64 Remote Similarity NPD4458 Phase 2
0.6393 Remote Similarity NPD1777 Approved
0.6393 Remote Similarity NPD1776 Approved
0.6393 Remote Similarity NPD2134 Approved
0.6393 Remote Similarity NPD2136 Approved
0.6393 Remote Similarity NPD2135 Approved
0.6324 Remote Similarity NPD796 Phase 2
0.6319 Remote Similarity NPD3083 Approved
0.629 Remote Similarity NPD5172 Phase 2
0.6289 Remote Similarity NPD7138 Phase 2
0.6286 Remote Similarity NPD5080 Phase 2
0.6257 Remote Similarity NPD549 Approved
0.6244 Remote Similarity NPD1234 Discontinued
0.6238 Remote Similarity NPD5079 Phase 2
0.6232 Remote Similarity NPD4495 Phase 1
0.6227 Remote Similarity NPD7502 Clinical (unspecified phase)
0.6226 Remote Similarity NPD534 Phase 2
0.6226 Remote Similarity NPD4555 Clinical (unspecified phase)
0.6226 Remote Similarity NPD537 Phase 2
0.6224 Remote Similarity NPD2544 Clinical (unspecified phase)
0.6182 Remote Similarity NPD870 Clinical (unspecified phase)
0.6173 Remote Similarity NPD2630 Approved
0.6173 Remote Similarity NPD2632 Approved
0.6173 Remote Similarity NPD2631 Clinical (unspecified phase)
0.6162 Remote Similarity NPD2127 Suspended
0.6154 Remote Similarity NPD2872 Phase 2
0.6154 Remote Similarity NPD194 Clinical (unspecified phase)
0.6114 Remote Similarity NPD3593 Approved
0.6087 Remote Similarity NPD4533 Clinical (unspecified phase)
0.6058 Remote Similarity NPD4612 Discontinued
0.598 Remote Similarity NPD4054 Clinical (unspecified phase)
0.5968 Remote Similarity NPD2593 Clinical (unspecified phase)
0.5913 Remote Similarity NPD1915 Phase 1
0.5913 Remote Similarity NPD4683 Phase 3
0.5909 Remote Similarity NPD3913 Clinical (unspecified phase)
0.5902 Remote Similarity NPD5665 Clinical (unspecified phase)
0.5895 Remote Similarity NPD9582 Phase 3
0.5892 Remote Similarity NPD1709 Phase 1
0.5892 Remote Similarity NPD4074 Clinical (unspecified phase)
0.5888 Remote Similarity NPD2457 Phase 2
0.5888 Remote Similarity NPD2456 Phase 2
0.5872 Remote Similarity NPD4187 Clinical (unspecified phase)
0.5862 Remote Similarity NPD5171 Clinical (unspecified phase)
0.5858 Remote Similarity NPD9633 Phase 3
0.5857 Remote Similarity NPD8410 Clinical (unspecified phase)
0.5856 Remote Similarity NPD3085 Phase 1
0.5851 Remote Similarity NPD4239 Clinical (unspecified phase)
0.5849 Remote Similarity NPD3013 Phase 3
0.5849 Remote Similarity NPD3014 Clinical (unspecified phase)
0.5843 Remote Similarity NPD7158 Phase 1
0.5829 Remote Similarity NPD1367 Phase 2
0.5824 Remote Similarity NPD3086 Phase 3
0.5814 Remote Similarity NPD6528 Phase 1
0.5805 Remote Similarity NPD6112 Approved
0.5805 Remote Similarity NPD691 Discontinued
0.5803 Remote Similarity NPD4089 Clinical (unspecified phase)
0.5799 Remote Similarity NPD6381 Phase 2
0.5797 Remote Similarity NPD4599 Clinical (unspecified phase)
0.5789 Remote Similarity NPD5269 Clinical (unspecified phase)
0.5789 Remote Similarity NPD3849 Clinical (unspecified phase)
0.5787 Remote Similarity NPD6772 Clinical (unspecified phase)
0.5782 Remote Similarity NPD1197 Approved
0.5778 Remote Similarity NPD1427 Clinical (unspecified phase)
0.5778 Remote Similarity NPD5627 Approved
0.5776 Remote Similarity NPD8375 Approved
0.5774 Remote Similarity NPD9408 Phase 3
0.5773 Remote Similarity NPD2928 Phase 2
0.5769 Remote Similarity NPD3708 Phase 2
0.5764 Remote Similarity NPD4615 Phase 2
0.575 Remote Similarity NPD2591 Phase 2
0.5746 Remote Similarity NPD775 Approved
0.5746 Remote Similarity NPD8409 Suspended
0.5737 Remote Similarity NPD5925 Phase 1
0.5735 Remote Similarity NPD3485 Clinical (unspecified phase)
0.5726 Remote Similarity NPD8371 Clinical (unspecified phase)
0.5721 Remote Similarity NPD5584 Clinical (unspecified phase)
0.5721 Remote Similarity NPD3002 Clinical (unspecified phase)
0.5714 Remote Similarity NPD8373 Clinical (unspecified phase)
0.5707 Remote Similarity NPD1675 Phase 1
0.5707 Remote Similarity NPD9605 Phase 3
0.5707 Remote Similarity NPD1674 Clinical (unspecified phase)
0.5702 Remote Similarity NPD4654 Phase 1
0.5693 Remote Similarity NPD7504 Discontinued
0.5682 Remote Similarity NPD245 Suspended
0.5665 Remote Similarity NPD545 Clinical (unspecified phase)
0.5659 Remote Similarity NPD2446 Approved
0.5659 Remote Similarity NPD2362 Approved
0.5659 Remote Similarity NPD2445 Approved
0.5657 Remote Similarity NPD5508 Phase 1
0.5646 Remote Similarity NPD2536 Discontinued
0.5641 Remote Similarity NPD5324 Clinical (unspecified phase)
0.5641 Remote Similarity NPD8291 Clinical (unspecified phase)
0.5637 Remote Similarity NPD1286 Suspended
0.5631 Remote Similarity NPD1912 Approved
0.5628 Remote Similarity NPD8321 Discontinued
0.5625 Remote Similarity NPD3287 Clinical (unspecified phase)
0.5616 Remote Similarity NPD7183 Phase 2
0.5608 Remote Similarity NPD1335 Approved
0.5606 Remote Similarity NPD2930 Clinical (unspecified phase)
0.5606 Remote Similarity NPD1167 Phase 3

  Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data