Structure

Physi-Chem Properties

Molecular Weight:  402.13
Volume:  395.333
LogP:  2.888
LogD:  2.798
LogS:  -4.243
# Rotatable Bonds:  7
TPSA:  85.59
# H-Bond Aceptor:  8
# H-Bond Donor:  0
# Rings:  3
# Heavy Atoms:  8

MedChem Properties

QED Drug-Likeness Score:  0.594
Synthetic Accessibility Score:  2.45
Fsp3:  0.286
Lipinski Rule-of-5:  Accepted
Pfizer Rule:  Accepted
GSK Rule:  Rejected
BMS Rule:  0
Golden Triangle Rule:  Accepted
Chelating Alert:  0
PAINS Alert:  0

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

Caco-2 Permeability:  -4.518
MDCK Permeability:  2.3837787011871114e-05
Pgp-inhibitor:  0.999
Pgp-substrate:  0.0
Human Intestinal Absorption (HIA):  0.013
20% Bioavailability (F20%):  0.001
30% Bioavailability (F30%):  0.006

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):  0.087
Plasma Protein Binding (PPB):  68.59285736083984%
Volume Distribution (VD):  0.93
Pgp-substrate:  30.207332611083984%

ADMET: Metabolism

CYP1A2-inhibitor:  0.2
CYP1A2-substrate:  0.988
CYP2C19-inhibitor:  0.518
CYP2C19-substrate:  0.904
CYP2C9-inhibitor:  0.619
CYP2C9-substrate:  0.913
CYP2D6-inhibitor:  0.002
CYP2D6-substrate:  0.922
CYP3A4-inhibitor:  0.533
CYP3A4-substrate:  0.846

ADMET: Excretion

Clearance (CL):  4.605
Half-life (T1/2):  0.372

ADMET: Toxicity

hERG Blockers:  0.331
Human Hepatotoxicity (H-HT):  0.07
Drug-inuced Liver Injury (DILI):  0.915
AMES Toxicity:  0.202
Rat Oral Acute Toxicity:  0.326
Maximum Recommended Daily Dose:  0.02
Skin Sensitization:  0.23
Carcinogencity:  0.052
Eye Corrosion:  0.003
Eye Irritation:  0.043
Respiratory Toxicity:  0.031

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
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Biological Activities  
Similar NPs/Drugs  

  Natural Product: NPC85233

Natural Product ID:  NPC85233
Common Name*:   Nobiletin
IUPAC Name:   2-(3,4-dimethoxyphenyl)-5,6,7,8-tetramethoxychromen-4-one
Synonyms:   NSC-76751
Standard InCHIKey:  MRIAQLRQZPPODS-UHFFFAOYSA-N
Standard InCHI:  InChI=1S/C21H22O8/c1-23-13-8-7-11(9-15(13)24-2)14-10-12(22)16-17(25-3)19(26-4)21(28-6)20(27-5)18(16)29-14/h7-10H,1-6H3
SMILES:  COc1ccc(cc1OC)c1cc(=O)c2c(c(c(c(c2o1)OC)OC)OC)OC
Synthetic Gene Cluster:   n.a.
ChEMBL Identifier:   CHEMBL76447
PubChem CID:   72344
Chemical Classification**:  
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0000261] Phenylpropanoids and polyketides
      • [CHEMONTID:0000334] Flavonoids
        • [CHEMONTID:0002585] O-methylated flavonoids
          • [CHEMONTID:0002593] 8-O-methylated flavonoids

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO15117 Chromolaena odorata Species Asteraceae Eukaryota n.a. n.a. n.a. DOI[10.1016/S0031-9422(00)88710-5]
NPO27288 Citrus maxima Species Rutaceae Eukaryota n.a. n.a. n.a. DOI[10.1016/S0031-9422(99)00119-3]
NPO20633 Lansium domesticum Species Meliaceae Eukaryota n.a. exocarp n.a. DOI[10.1021/jo00172a004]
NPO6098 Salvia officinalis Species Lamiaceae Eukaryota n.a. n.a. n.a. PMID[10096857]
NPO25443 Citrus reticulata Species Rutaceae Eukaryota n.a. fruit n.a. PMID[10606547]
NPO19787 Citrus sinensis Species Rutaceae Eukaryota n.a. fruit n.a. PMID[10606547]
NPO7317 Citrus aurantium Species Rutaceae Eukaryota n.a. n.a. n.a. PMID[10606602]
NPO20633 Lansium domesticum Species Meliaceae Eukaryota n.a. n.a. n.a. PMID[12444710]
NPO25415 Pseudopterogorgia kallos Species Gorgoniidae Eukaryota n.a. n.a. n.a. PMID[15128261]
NPO25294 Merulius incarnatus Species Meruliaceae Eukaryota n.a. n.a. n.a. PMID[16643059]
NPO5270 Citrus natsudaidai Species Rutaceae Eukaryota n.a. n.a. n.a. PMID[17689080]
NPO24744 Chloranthus tianmushanensis Species Chloranthaceae Eukaryota leaves n.a. n.a. PMID[18357995]
NPO20633 Lansium domesticum Species Meliaceae Eukaryota seeds n.a. n.a. PMID[19299148]
NPO24475 Aceriphyllum rossii n.a. n.a. n.a. n.a. n.a. n.a. PMID[19618898]
NPO20633 Lansium domesticum Species Meliaceae Eukaryota twigs Xishuangbanna, Mengla County, Yunnan Province, China 2005-AUG PMID[21401117]
NPO20633 Lansium domesticum Species Meliaceae Eukaryota n.a. twig n.a. PMID[21401117]
NPO15117 Chromolaena odorata Species Asteraceae Eukaryota n.a. n.a. n.a. PMID[23186307]
NPO23805 Arnica nevadensis Species Asteraceae Eukaryota n.a. n.a. n.a. PMID[23501116]
NPO6098 Salvia officinalis Species Lamiaceae Eukaryota n.a. n.a. n.a. PMID[23507152]
NPO21771 Citrus trifoliata Species Rutaceae Eukaryota n.a. fruit n.a. PMID[23872723]
NPO12182 Murraya exotica Species Rutaceae Eukaryota n.a. leaf n.a. PMID[24354205]
NPO12182 Murraya exotica Species Rutaceae Eukaryota n.a. twig n.a. PMID[24354205]
NPO2715 Murraya paniculata Species Rutaceae Eukaryota n.a. leaf n.a. PMID[24354205]
NPO2715 Murraya paniculata Species Rutaceae Eukaryota n.a. twig n.a. PMID[24354205]
NPO22194 Kaempferia pulchra Species Zingiberaceae Eukaryota n.a. n.a. n.a. PMID[25919052]
NPO12182 Murraya exotica Species Rutaceae Eukaryota n.a. n.a. n.a. PMID[29303577]
NPO20633 Lansium domesticum Species Meliaceae Eukaryota Leaves n.a. n.a. PMID[30335380]
NPO22194 Kaempferia pulchra Species Zingiberaceae Eukaryota Rhizomes n.a. n.a. PMID[31836445]
NPO21771 Citrus trifoliata Species Rutaceae Eukaryota n.a. n.a. n.a. PMID[32996318]
NPO41035 Rhus undulata Species Anacardiaceae Eukaryota Roots n.a. n.a. PMID[6241941]
NPO19787 Citrus sinensis Species Rutaceae Eukaryota Fruit n.a. n.a. Database[FooDB]
NPO19787 Citrus sinensis Species Rutaceae Eukaryota Fruit Juice n.a. n.a. Database[FooDB]
NPO6098 Salvia officinalis Species Lamiaceae Eukaryota Leaf n.a. n.a. Database[FooDB]
NPO6098 Salvia officinalis Species Lamiaceae Eukaryota Leaf Essent. Oil n.a. n.a. Database[FooDB]
NPO19787 Citrus sinensis Species Rutaceae Eukaryota Pericarp n.a. n.a. Database[FooDB]
NPO6098 Salvia officinalis Species Lamiaceae Eukaryota Plant n.a. n.a. Database[FooDB]
NPO6098 Salvia officinalis Species Lamiaceae Eukaryota Root n.a. n.a. Database[FooDB]
NPO19787 Citrus sinensis Species Rutaceae Eukaryota Root Bark n.a. n.a. Database[FooDB]
NPO6098 Salvia officinalis Species Lamiaceae Eukaryota Seed n.a. n.a. Database[FooDB]
NPO6098 Salvia officinalis Species Lamiaceae Eukaryota Shoot n.a. n.a. Database[FooDB]
NPO6098 Salvia officinalis Species Lamiaceae Eukaryota Stem n.a. n.a. Database[FooDB]
NPO27288 Citrus maxima Species Rutaceae Eukaryota n.a. n.a. Database[FooDB]
NPO19787 Citrus sinensis Species Rutaceae Eukaryota n.a. n.a. Database[FooDB]
NPO6098 Salvia officinalis Species Lamiaceae Eukaryota n.a. n.a. Database[FooDB]
NPO25443 Citrus reticulata Species Rutaceae Eukaryota n.a. n.a. Database[FooDB]
NPO19787 Citrus sinensis Species Rutaceae Eukaryota n.a. n.a. Database[FooDB]
NPO19787 Citrus sinensis Species Rutaceae Eukaryota Bark n.a. n.a. Database[FooDB]
NPO25443 Citrus reticulata Species Rutaceae Eukaryota n.a. n.a. Database[FooDB]
NPO25443 Citrus reticulata Species Rutaceae Eukaryota Fruit n.a. n.a. Database[FooDB]
NPO6098 Salvia officinalis Species Lamiaceae Eukaryota n.a. n.a. Database[FooDB]
NPO25443 Citrus reticulata Species Rutaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO22736 Drosera peltata Species Droseraceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO25359 Isodon kameba Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO10082 Citrus unshiu Species Rutaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO16308 Citrus wilsonii Species Rutaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO6714 Securidaca inappendiculata Species Polygalaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO7317 Citrus aurantium Species Rutaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO19127 Citrus tankan Species Rutaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO25623 Taxodium mucronatum Species Cupressaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO25045 Senecio squalidus Species Asteraceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO19787 Citrus sinensis Species Rutaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO6098 Salvia officinalis Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO15730 Citrus medica Species Rutaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO25258 Seriphidium cinum Species Asteraceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO2715 Murraya paniculata Species Rutaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO25443 Citrus reticulata Species Rutaceae Eukaryota Fruits n.a. Database[Phenol-Explorer]
NPO25443 Citrus reticulata Species Rutaceae Eukaryota n.a. n.a. Database[Phenol-Explorer]
NPO27288 Citrus maxima Species Rutaceae Eukaryota n.a. n.a. Database[Phenol-Explorer]
NPO25443 Citrus reticulata Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO7317 Citrus aurantium Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO25045 Senecio squalidus Species Asteraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO16308 Citrus wilsonii Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO19127 Citrus tankan Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO8148 Wrightia tomentosa Species Apocynaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO2715 Murraya paniculata Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO15730 Citrus medica Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO25258 Seriphidium cinum Species Asteraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO10082 Citrus unshiu Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO27288 Citrus maxima Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO6098 Salvia officinalis Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO21771 Citrus trifoliata Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO12182 Murraya exotica Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO22736 Drosera peltata Species Droseraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO19787 Citrus sinensis Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO25623 Taxodium mucronatum Species Cupressaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO6714 Securidaca inappendiculata Species Polygalaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO25359 Isodon kameba Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO15117 Chromolaena odorata Species Asteraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO15730 Citrus medica Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO19787 Citrus sinensis Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO16308 Citrus wilsonii Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO2715 Murraya paniculata Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO25258 Seriphidium cinum Species Asteraceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO19127 Citrus tankan Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO10082 Citrus unshiu Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO31311 Citrus reticulate Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO7317 Citrus aurantium Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO25443 Citrus reticulata Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO5270 Citrus natsudaidai Species Rutaceae Eukaryota n.a. n.a. n.a. Database[Title]
NPO25443 Citrus reticulata Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO2715 Murraya paniculata Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO10082 Citrus unshiu Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO7317 Citrus aurantium Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO19787 Citrus sinensis Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO5270 Citrus natsudaidai Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO21771 Citrus trifoliata Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO27288 Citrus maxima Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO15730 Citrus medica Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO16308 Citrus wilsonii Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO12182 Murraya exotica Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO8148 Wrightia tomentosa Species Apocynaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO7445 Pteris prolifera Species Pteridaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO5940 Solanum fraxinifolium Species Solanaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24475 Aceriphyllum rossii n.a. n.a. n.a. n.a. n.a. n.a. Database[UNPD]
NPO25529 Bursaria spinosa Species Pittosporaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25415 Pseudopterogorgia kallos Species Gorgoniidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO6714 Securidaca inappendiculata Species Polygalaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25699 Vitex madiensis Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24929 Aria pallescens Species Rosaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25045 Senecio squalidus Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO23453 Pheidole pallidula Species Formicidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO27288 Citrus maxima Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15117 Chromolaena odorata Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25144 Artemisia monogyna Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO28665 Sesbania punicea Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19787 Citrus sinensis Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25291 Lactarius scrobiculatus Species Russulaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24556 Bassia butyracea Species Abylidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24744 Chloranthus tianmushanensis Species Chloranthaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21771 Citrus trifoliata Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO5270 Citrus natsudaidai Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26128 Clonostachys rosea Species Bionectriaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26042 Agnorhiza bolanderi Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25294 Merulius incarnatus Species Meruliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25326 Dendrosenecio kilimanjari Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25443 Citrus reticulata Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO6098 Salvia officinalis Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25187 Cladonia evansii Species Cladoniaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24068 Prunus laurocerasus Species Rosaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25623 Taxodium mucronatum Species Cupressaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO23805 Arnica nevadensis Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25234 Epaltes gariepina Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20823 Stenostomum lucidum Species Rubiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO7317 Citrus aurantium Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19127 Citrus tankan Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO14373 Gutierrezia spathulata Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24383 Ficus formosana Species Moraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO16308 Citrus wilsonii Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25471 Chromolaena pulchella Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25390 Pterocarpus grandiflorus Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO22736 Drosera peltata Species Droseraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO1794 Ilex affinis Species Aquifoliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25090 Araujia sericifera Species Apocynaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO23567 Coccus fagi Species Coccidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24675 Quercus aegilops Species Fagaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13883 Vernonia pooleae Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25258 Seriphidium cinum Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24640 Echinops amplexicaulis Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20633 Lansium domesticum Species Meliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24218 Fusarium gibbosum Species Nectriaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO10082 Citrus unshiu Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO7552 Alligator mississippiensis Species Alligatoridae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12182 Murraya exotica Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24599 Streptomyces althioticus Species Streptomycetaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO20833 Beyeria brevifolia Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO2715 Murraya paniculata Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24987 Simira eliezeriana Species Rubiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18352 Anaxagorea clavata Species Annonaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO22194 Kaempferia pulchra Species Zingiberaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO23963 Odixia angusta Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24291 Rhizobium phaseoli Species Rhizobiaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO24830 Prosopis glandulosa Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24511 Dipterocarpus alatus Species Dipterocarpaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25671 Gardenia fosbergii Species Rubiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO10792 Deuterophoma tracheiphila n.a. n.a. n.a. n.a. n.a. n.a. Database[UNPD]
NPO23691 Pyrosoma giganteum Species Pyrosomatidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15730 Citrus medica Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25359 Isodon kameba Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]

☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  NP Quantity Composition/Concentration

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference
NPO19787 NPC85233 Beverage (juice) n.a. 0.203999992 n.a. n.a. mg/100g Database [PHENOL EXPLORER]
NPO19787 NPC85233 Beverage (juice) n.a. 0.367419362 n.a. n.a. mg/100g Database [PHENOL EXPLORER]
NPO19787 NPC85233 Beverage (juice) n.a. 0.317709684 n.a. n.a. mg/100g Database [PHENOL EXPLORER]
NPO19787 NPC85233 Beverage (juice) n.a. 0.075142856 n.a. n.a. mg/100g Database [PHENOL EXPLORER]

☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT517 Cell Line Panel NCI-60 (60 carcinoma cell lines) Homo sapiens GI50 = 40000.0 nM PMID[568276]
NPT116 Cell Line HL-60 Homo sapiens IC50 = 41500.0 nM PMID[568277]
NPT116 Cell Line HL-60 Homo sapiens AC50 > 100000.0 nM PMID[568277]
NPT519 Cell Line SH-SY5Y Homo sapiens Activity = 30.0 % PMID[568279]
NPT139 Cell Line HT-29 Homo sapiens IC50 = 24000.0 nM PMID[568281]
NPT520 Cell Line 3T3-L1 Mus musculus IC50 = 50000.0 nM PMID[568281]
NPT91 Cell Line KB Homo sapiens ED50 = 3.0 ug ml-1 PMID[568282]
NPT149 Individual Protein Endoplasmic reticulum-associated amyloid beta-peptide-binding protein Homo sapiens Potency = 19952.6 nM PMID[568288]
NPT48 Individual Protein Lysine-specific demethylase 4D-like Homo sapiens Potency = 31622.8 nM PMID[568289]
NPT48 Individual Protein Lysine-specific demethylase 4D-like Homo sapiens Potency = 22387.2 nM PMID[568288]
NPT48 Individual Protein Lysine-specific demethylase 4D-like Homo sapiens Potency = 25118.9 nM PMID[568290]
NPT51 Individual Protein Microtubule-associated protein tau Homo sapiens Potency = 25118.9 nM PMID[568290]
NPT53 Individual Protein 4'-phosphopantetheinyl transferase ffp Bacillus subtilis Potency = 25118.9 nM PMID[568288]
NPT53 Individual Protein 4'-phosphopantetheinyl transferase ffp Bacillus subtilis Potency = 89125.1 nM PMID[568290]
NPT282 Individual Protein MAP kinase ERK2 Homo sapiens Potency = 31622.8 nM PMID[568288]
NPT56 Individual Protein Beta-lactamase AmpC Escherichia coli K-12 Potency = 1412.5 nM PMID[568289]
NPT282 Individual Protein MAP kinase ERK2 Homo sapiens Potency = 11220.2 nM PMID[568290]
NPT151 Individual Protein 15-hydroxyprostaglandin dehydrogenase [NAD+] Homo sapiens Potency = 28183.8 nM PMID[568288]
NPT531 Individual Protein Nuclear receptor ROR-gamma Mus musculus Potency = 11220.2 nM PMID[568289]
NPT109 Individual Protein Cytochrome P450 3A4 Homo sapiens Potency = 25118.9 nM PMID[568288]
NPT1422 Individual Protein ATP-binding cassette sub-family G member 2 Homo sapiens IC50 = 4900.0 nM PMID[568291]
NPT1422 Individual Protein ATP-binding cassette sub-family G member 2 Homo sapiens IC50 = 4400.0 nM PMID[568291]
NPT443 Individual Protein Histone acetyltransferase GCN5 Homo sapiens Potency n.a. 35481.3 nM PMID[568288]
NPT5 Individual Protein Histone-lysine N-methyltransferase, H3 lysine-9 specific 3 Homo sapiens Potency n.a. 501.2 nM PMID[568290]
NPT64 Individual Protein ATPase family AAA domain-containing protein 5 Homo sapiens Potency n.a. 25929.0 nM PMID[568289]
NPT520 Cell Line 3T3-L1 Mus musculus Activity = 10.7 % PMID[568293]
NPT520 Cell Line 3T3-L1 Mus musculus Activity = 12.6 % PMID[568293]
NPT520 Cell Line 3T3-L1 Mus musculus Activity = 15.3 % PMID[568293]
NPT520 Cell Line 3T3-L1 Mus musculus Activity = -6.7 % PMID[568293]
NPT520 Cell Line 3T3-L1 Mus musculus Activity = 14.1 % PMID[568293]
NPT367 Cell Line MDA-N Homo sapiens GI50 n.a. 49888.45 nM PMID[568296]
NPT368 Cell Line SN12C Homo sapiens GI50 n.a. 41495.4 nM PMID[568296]
NPT369 Cell Line ACHN Homo sapiens GI50 n.a. 37325.02 nM PMID[568296]
NPT370 Cell Line NCI-H23 Homo sapiens GI50 n.a. 47097.73 nM PMID[568296]
NPT372 Cell Line HOP-92 Homo sapiens GI50 n.a. 18323.14 nM PMID[568296]
NPT371 Cell Line UO-31 Homo sapiens GI50 n.a. 24660.39 nM PMID[568296]
NPT116 Cell Line HL-60 Homo sapiens GI50 n.a. 17258.38 nM PMID[568296]
NPT373 Cell Line SK-MEL-5 Homo sapiens GI50 n.a. 18578.04 nM PMID[568296]
NPT374 Cell Line SF-539 Homo sapiens GI50 n.a. 100000.0 nM PMID[568296]
NPT90 Cell Line DU-145 Homo sapiens GI50 n.a. 61094.2 nM PMID[568296]
NPT375 Cell Line Malme-3M Homo sapiens GI50 n.a. 100000.0 nM PMID[568296]
NPT111 Cell Line K562 Homo sapiens GI50 n.a. 36307.81 nM PMID[568296]
NPT376 Cell Line A498 Homo sapiens GI50 n.a. 25176.77 nM PMID[568296]
NPT377 Cell Line OVCAR-3 Homo sapiens GI50 n.a. 24717.24 nM PMID[568296]
NPT112 Cell Line MOLT-4 Homo sapiens GI50 n.a. 25234.81 nM PMID[568296]
NPT379 Cell Line HOP-62 Homo sapiens GI50 n.a. 44668.36 nM PMID[568296]
NPT378 Cell Line NCI/ADR-RES Homo sapiens GI50 n.a. 20323.57 nM PMID[568296]
NPT381 Cell Line OVCAR-8 Homo sapiens GI50 n.a. 29580.12 nM PMID[568296]
NPT380 Cell Line U-251 Homo sapiens GI50 n.a. 70957.78 nM PMID[568296]
NPT382 Cell Line OVCAR-5 Homo sapiens GI50 n.a. 100000.0 nM PMID[568296]
NPT383 Cell Line SNB-19 Homo sapiens GI50 n.a. 100000.0 nM PMID[568296]
NPT82 Cell Line MDA-MB-231 Homo sapiens GI50 n.a. 34514.37 nM PMID[568296]
NPT385 Cell Line SR Homo sapiens GI50 n.a. 59703.53 nM PMID[568296]
NPT384 Cell Line TK-10 Homo sapiens GI50 n.a. 50118.72 nM PMID[568296]
NPT323 Cell Line SW-620 Homo sapiens GI50 n.a. 47533.52 nM PMID[568296]
NPT455 Cell Line NCI-H522 Homo sapiens GI50 n.a. 28575.91 nM PMID[568296]
NPT387 Cell Line M14 Homo sapiens GI50 n.a. 55847.02 nM PMID[568296]
NPT388 Cell Line NCI-H322M Homo sapiens GI50 n.a. 39084.09 nM PMID[568296]
NPT389 Cell Line RPMI-8226 Homo sapiens GI50 n.a. 39810.72 nM PMID[568296]
NPT456 Cell Line OVCAR-4 Homo sapiens GI50 n.a. 27989.81 nM PMID[568296]
NPT390 Cell Line LOX IMVI Homo sapiens GI50 n.a. 30060.76 nM PMID[568296]
NPT457 Cell Line BT-549 Homo sapiens GI50 n.a. 62661.39 nM PMID[568296]
NPT147 Cell Line SK-MEL-2 Homo sapiens GI50 n.a. 49431.07 nM PMID[568296]
NPT391 Cell Line HCC 2998 Homo sapiens GI50 n.a. 32734.07 nM PMID[568296]
NPT81 Cell Line A549 Homo sapiens GI50 n.a. 42756.29 nM PMID[568296]
NPT392 Cell Line SNB-75 Homo sapiens GI50 n.a. 30478.95 nM PMID[568296]
NPT393 Cell Line HCT-116 Homo sapiens GI50 n.a. 72443.6 nM PMID[568296]
NPT148 Cell Line HCT-15 Homo sapiens GI50 n.a. 26485.0 nM PMID[568296]
NPT394 Cell Line EKVX Homo sapiens GI50 n.a. 56234.13 nM PMID[568296]
NPT395 Cell Line SF-268 Homo sapiens GI50 n.a. 66834.39 nM PMID[568296]
NPT83 Cell Line MCF7 Homo sapiens GI50 n.a. 4864.07 nM PMID[568296]
NPT146 Cell Line SK-OV-3 Homo sapiens GI50 n.a. 61659.5 nM PMID[568296]
NPT397 Cell Line NCI-H460 Homo sapiens GI50 n.a. 52844.53 nM PMID[568296]
NPT396 Cell Line T47D Homo sapiens GI50 n.a. 19543.39 nM PMID[568296]
NPT398 Cell Line UACC-62 Homo sapiens GI50 n.a. 25644.84 nM PMID[568296]
NPT308 Cell Line CAKI-1 Homo sapiens GI50 n.a. 29444.22 nM PMID[568296]
NPT400 Cell Line MDA-MB-435 Homo sapiens GI50 n.a. 45081.67 nM PMID[568296]
NPT399 Cell Line SF-295 Homo sapiens GI50 n.a. 32508.73 nM PMID[568296]
NPT458 Cell Line IGROV-1 Homo sapiens GI50 n.a. 49203.95 nM PMID[568296]
NPT401 Cell Line 786-0 Homo sapiens GI50 n.a. 49888.45 nM PMID[568296]
NPT402 Cell Line Hs-578T Homo sapiens GI50 n.a. 21086.28 nM PMID[568296]
NPT403 Cell Line UACC-257 Homo sapiens GI50 n.a. 33496.54 nM PMID[568296]
NPT404 Cell Line CCRF-CEM Homo sapiens GI50 n.a. 65614.53 nM PMID[568296]
NPT139 Cell Line HT-29 Homo sapiens GI50 n.a. 32136.61 nM PMID[568296]
NPT405 Cell Line NCI-H226 Homo sapiens GI50 n.a. 91622.05 nM PMID[568296]
NPT170 Cell Line SK-MEL-28 Homo sapiens GI50 n.a. 100000.0 nM PMID[568296]
NPT407 Cell Line COLO 205 Homo sapiens GI50 n.a. 34994.52 nM PMID[568296]
NPT406 Cell Line RXF 393 Homo sapiens GI50 n.a. 61517.69 nM PMID[568296]
NPT622 Individual Protein Solute carrier organic anion transporter family member 2B1 Homo sapiens Activity = 40.0 % PMID[568298]
NPT622 Individual Protein Solute carrier organic anion transporter family member 2B1 Homo sapiens Activity = 58.0 % PMID[568298]
NPT10 Individual Protein Geminin Homo sapiens Potency n.a. 14581.0 nM PMID[568292]
NPT10 Individual Protein Geminin Homo sapiens Potency n.a. 316.2 nM PMID[568292]
NPT101 Individual Protein Glucagon-like peptide 1 receptor Homo sapiens Potency n.a. 1778.3 nM PMID[568292]
NPT101 Individual Protein Glucagon-like peptide 1 receptor Homo sapiens Potency n.a. 10000.0 nM PMID[568292]
NPT50 Individual Protein Tyrosyl-DNA phosphodiesterase 1 Homo sapiens Potency n.a. 20596.2 nM PMID[568288]
NPT50 Individual Protein Tyrosyl-DNA phosphodiesterase 1 Homo sapiens Potency n.a. 23109.3 nM PMID[568292]
NPT50 Individual Protein Tyrosyl-DNA phosphodiesterase 1 Homo sapiens Potency n.a. 10322.5 nM PMID[568292]
NPT160 Individual Protein TAR DNA-binding protein 43 Homo sapiens Potency n.a. 17782.8 nM PMID[568292]
NPT105 Individual Protein Muscleblind-like protein 1 Homo sapiens Potency n.a. 25118.9 nM PMID[568290]
NPT116 Cell Line HL-60 Homo sapiens IC50 = 0.01 ug.mL-1 PMID[568309]
NPT566 Organism Salmonella typhimurium Salmonella enterica subsp. enterica serovar Typhimurium Inhibition < 20.0 % PMID[568280]
NPT566 Organism Salmonella typhimurium Salmonella enterica subsp. enterica serovar Typhimurium Inhibition = 43.0 % PMID[568280]
NPT29 Organism Rattus norvegicus Rattus norvegicus ED25 = 20.0 mg kg-1 PMID[568283]
NPT967 Individual Protein Xanthine dehydrogenase Homo sapiens IC50 > 100000.0 nM PMID[568284]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. IC50 > 100000.0 nM PMID[568284]
NPT2 Others Unspecified IC50 = 10000.0 nM PMID[568286]
NPT2 Others Unspecified Activity = 340.0 % PMID[568287]
NPT791 Individual Protein Cruzipain Trypanosoma cruzi Potency = 39810.7 nM PMID[568289]
NPT791 Individual Protein Cruzipain Trypanosoma cruzi Potency = 39810.7 nM PMID[568288]
NPT94 Individual Protein Aldehyde dehydrogenase 1A1 Homo sapiens Potency = 28183.8 nM PMID[568289]
NPT94 Individual Protein Aldehyde dehydrogenase 1A1 Homo sapiens Potency = 28183.8 nM PMID[568288]
NPT197 Protein-Protein Interaction Menin/Histone-lysine N-methyltransferase MLL Homo sapiens Potency = 7943.3 nM PMID[568290]
NPT197 Protein-Protein Interaction Menin/Histone-lysine N-methyltransferase MLL Homo sapiens Potency = 28183.8 nM PMID[568288]
NPT2 Others Unspecified Potency n.a. 5173.5 nM PMID[568292]
NPT2 Others Unspecified Potency n.a. 25.9 nM PMID[568289]
NPT2 Others Unspecified IC50 = 20900.0 nM PMID[568294]
NPT2 Others Unspecified IC50 = 17000.0 nM PMID[568294]
NPT6 Organism Plasmodium falciparum Plasmodium falciparum Potency n.a. 104.2 nM PMID[568289]
NPT2 Others Unspecified IC50 = 20900.0 nM PMID[568295]
NPT2 Others Unspecified IC50 = 17000.0 nM PMID[568295]
NPT668 Individual Protein P-glycoprotein 1 Homo sapiens Activity = 604.0 % PMID[568299]
NPT668 Individual Protein P-glycoprotein 1 Homo sapiens IC50 = 11500.0 nM PMID[568300]
NPT2 Others Unspecified Potency n.a. 22387.2 nM PMID[568292]
NPT755 Individual Protein Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 Homo sapiens Potency n.a. 79432.8 nM PMID[568292]
NPT1175 Organism Spodoptera litura Spodoptera litura ED50 = 5.6 umol/cm2 PMID[568302]
NPT2791 Organism Citrus Citrus Activity = 20.0 % PMID[568303]
NPT2793 Organism Phytophthora citrophthora Phytophthora citrophthora IC50 = 590000.0 nM PMID[568303]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. GI = 80.0 % PMID[568304]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. GI = 47.4 % PMID[568304]
NPT73 Individual Protein Solute carrier organic anion transporter family member 1B1 Homo sapiens Inhibition = 550.09 % PMID[568305]
NPT72 Individual Protein Solute carrier organic anion transporter family member 1B3 Homo sapiens Inhibition = 133.31 % PMID[568305]
NPT2 Others Unspecified Potency n.a. 35481.3 nM PMID[568288]
NPT566 Organism Salmonella typhimurium Salmonella enterica subsp. enterica serovar Typhimurium Inhibition = 56.0 % PMID[568307]
NPT20555 ORGANISM SARS-CoV-2 Severe acute respiratory syndrome coronavirus 2 Inhibition = -3.77 % PMID[568308]
NPT20556 SINGLE PROTEIN Replicase polyprotein 1ab Severe acute respiratory syndrome coronavirus 2 Inhibition = 10.21 % PMID[568310]
NPT20555 ORGANISM SARS-CoV-2 Severe acute respiratory syndrome coronavirus 2 Inhibition = 0.36 % PMID[568311]
NPT20 Organism Candida albicans Candida albicans Inhibition = 7.12 % PMID[568312]
NPT85 Organism Filobasidiella neoformans Cryptococcus neoformans Inhibition = -2.3 % PMID[568312]
NPT19 Organism Escherichia coli Escherichia coli Inhibition = -1.7 % PMID[568312]
NPT173 Organism Klebsiella pneumoniae Klebsiella pneumoniae Inhibition = 4.76 % PMID[568312]
NPT18 Organism Pseudomonas aeruginosa Pseudomonas aeruginosa Inhibition = 15.83 % PMID[568312]
NPT747 Organism Acinetobacter baumannii Acinetobacter baumannii Inhibition = 16.27 % PMID[568312]
NPT2922 Organism Staphylococcus aureus subsp. aureus Staphylococcus aureus subsp. aureus Inhibition = 13.24 % PMID[568312]

☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

  Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC85233 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9929 High Similarity NPC106461
0.9929 High Similarity NPC110639
0.9929 High Similarity NPC215932
0.9929 High Similarity NPC302408
0.9929 High Similarity NPC283002
0.9929 High Similarity NPC14958
0.9929 High Similarity NPC40818
0.9858 High Similarity NPC205522
0.9857 High Similarity NPC165512
0.979 High Similarity NPC201547
0.979 High Similarity NPC259058
0.9786 High Similarity NPC23955
0.972 High Similarity NPC69752
0.972 High Similarity NPC181250
0.9716 High Similarity NPC136278
0.9714 High Similarity NPC9966
0.9714 High Similarity NPC70853
0.9655 High Similarity NPC134677
0.965 High Similarity NPC63256
0.965 High Similarity NPC10304
0.9645 High Similarity NPC113089
0.9643 High Similarity NPC214919
0.9643 High Similarity NPC124467
0.9643 High Similarity NPC29536
0.9586 High Similarity NPC226973
0.9586 High Similarity NPC208043
0.9583 High Similarity NPC238366
0.9524 High Similarity NPC34725
0.9524 High Similarity NPC276059
0.9524 High Similarity NPC2476
0.9524 High Similarity NPC138360
0.9524 High Similarity NPC280339
0.9524 High Similarity NPC4455
0.9524 High Similarity NPC163780
0.9524 High Similarity NPC241774
0.9524 High Similarity NPC50715
0.9524 High Similarity NPC227325
0.9524 High Similarity NPC183597
0.9524 High Similarity NPC128863
0.9524 High Similarity NPC201136
0.9524 High Similarity NPC146165
0.9524 High Similarity NPC196439
0.9524 High Similarity NPC167815
0.9524 High Similarity NPC92659
0.9524 High Similarity NPC122623
0.9517 High Similarity NPC306821
0.951 High Similarity NPC310259
0.951 High Similarity NPC195919
0.951 High Similarity NPC216314
0.951 High Similarity NPC231013
0.951 High Similarity NPC120924
0.9459 High Similarity NPC178854
0.9459 High Similarity NPC257277
0.9456 High Similarity NPC145379
0.9456 High Similarity NPC231018
0.9456 High Similarity NPC69394
0.9456 High Similarity NPC183878
0.9456 High Similarity NPC86485
0.9456 High Similarity NPC476289
0.9456 High Similarity NPC276409
0.9456 High Similarity NPC250822
0.9456 High Similarity NPC47781
0.9456 High Similarity NPC22519
0.9456 High Similarity NPC186507
0.9456 High Similarity NPC472408
0.9456 High Similarity NPC176775
0.9456 High Similarity NPC255350
0.9456 High Similarity NPC75279
0.9456 High Similarity NPC274327
0.9456 High Similarity NPC160951
0.9452 High Similarity NPC308451
0.9448 High Similarity NPC328119
0.9444 High Similarity NPC299923
0.9441 High Similarity NPC471590
0.9433 High Similarity NPC58229
0.9396 High Similarity NPC93376
0.9396 High Similarity NPC189179
0.9396 High Similarity NPC75215
0.9396 High Similarity NPC224137
0.9396 High Similarity NPC227192
0.9392 High Similarity NPC213622
0.9392 High Similarity NPC32557
0.9392 High Similarity NPC256612
0.9392 High Similarity NPC20830
0.9392 High Similarity NPC208197
0.9392 High Similarity NPC189960
0.9388 High Similarity NPC212678
0.9388 High Similarity NPC83508
0.9388 High Similarity NPC188203
0.9388 High Similarity NPC162313
0.9388 High Similarity NPC120163
0.9388 High Similarity NPC241498
0.9388 High Similarity NPC293183
0.9388 High Similarity NPC275836
0.9388 High Similarity NPC275722
0.9388 High Similarity NPC292460
0.9388 High Similarity NPC198826
0.9388 High Similarity NPC187498
0.9388 High Similarity NPC142540
0.9388 High Similarity NPC57030
0.9388 High Similarity NPC301323
0.9388 High Similarity NPC239128
0.9388 High Similarity NPC25270
0.9388 High Similarity NPC71334
0.9388 High Similarity NPC301123
0.9388 High Similarity NPC166201
0.9388 High Similarity NPC131624
0.9388 High Similarity NPC100887
0.9388 High Similarity NPC256283
0.9388 High Similarity NPC222830
0.9388 High Similarity NPC156222
0.9379 High Similarity NPC195202
0.9379 High Similarity NPC261548
0.9371 High Similarity NPC182842
0.9371 High Similarity NPC293201
0.9333 High Similarity NPC261004
0.9333 High Similarity NPC19687
0.9333 High Similarity NPC105242
0.9333 High Similarity NPC204854
0.9333 High Similarity NPC4481
0.9333 High Similarity NPC7846
0.9333 High Similarity NPC104459
0.9333 High Similarity NPC143828
0.9333 High Similarity NPC152166
0.9333 High Similarity NPC18607
0.9333 High Similarity NPC22472
0.9333 High Similarity NPC257914
0.9333 High Similarity NPC176300
0.9333 High Similarity NPC253634
0.9333 High Similarity NPC191459
0.9333 High Similarity NPC288669
0.9333 High Similarity NPC238405
0.9333 High Similarity NPC130894
0.9333 High Similarity NPC9609
0.9333 High Similarity NPC300943
0.9333 High Similarity NPC115798
0.9333 High Similarity NPC18772
0.9333 High Similarity NPC25495
0.9329 High Similarity NPC98661
0.9329 High Similarity NPC247017
0.9329 High Similarity NPC49824
0.9329 High Similarity NPC474520
0.9324 High Similarity NPC128961
0.9324 High Similarity NPC246204
0.9324 High Similarity NPC472915
0.9324 High Similarity NPC280937
0.932 High Similarity NPC474170
0.932 High Similarity NPC474663
0.932 High Similarity NPC474388
0.932 High Similarity NPC198615
0.932 High Similarity NPC472535
0.932 High Similarity NPC117579
0.931 High Similarity NPC12200
0.931 High Similarity NPC33265
0.931 High Similarity NPC62536
0.9267 High Similarity NPC305663
0.9267 High Similarity NPC78302
0.9267 High Similarity NPC163524
0.9267 High Similarity NPC235215
0.9267 High Similarity NPC287979
0.9267 High Similarity NPC176665
0.9267 High Similarity NPC476981
0.9267 High Similarity NPC7973
0.9267 High Similarity NPC472438
0.9267 High Similarity NPC203891
0.9267 High Similarity NPC19097
0.9267 High Similarity NPC110070
0.9267 High Similarity NPC101830
0.9267 High Similarity NPC29841
0.9267 High Similarity NPC470402
0.9262 High Similarity NPC201451
0.9262 High Similarity NPC37392
0.9262 High Similarity NPC26227
0.9262 High Similarity NPC472909
0.9262 High Similarity NPC44079
0.9257 High Similarity NPC39732
0.9257 High Similarity NPC60972
0.9252 High Similarity NPC177839
0.9252 High Similarity NPC219330
0.9252 High Similarity NPC50728
0.9252 High Similarity NPC184136
0.9252 High Similarity NPC166753
0.9252 High Similarity NPC29056
0.9247 High Similarity NPC476342
0.9231 High Similarity NPC185607
0.922 High Similarity NPC44573
0.9205 High Similarity NPC190487
0.9205 High Similarity NPC193842
0.9205 High Similarity NPC154304
0.92 High Similarity NPC266960
0.92 High Similarity NPC292107
0.92 High Similarity NPC245546
0.92 High Similarity NPC55619
0.92 High Similarity NPC268161
0.92 High Similarity NPC200388
0.92 High Similarity NPC43243
0.92 High Similarity NPC100916
0.92 High Similarity NPC303255
0.92 High Similarity NPC472916
0.92 High Similarity NPC180340

  Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC85233 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.9456 High Similarity NPD2801 Approved
0.9133 High Similarity NPD3817 Phase 2
0.902 High Similarity NPD5494 Approved
0.8874 High Similarity NPD1934 Approved
0.8844 High Similarity NPD1511 Approved
0.875 High Similarity NPD2796 Approved
0.8725 High Similarity NPD1512 Approved
0.8701 High Similarity NPD3882 Suspended
0.8693 High Similarity NPD2393 Clinical (unspecified phase)
0.8599 High Similarity NPD1247 Approved
0.8562 High Similarity NPD3818 Discontinued
0.8553 High Similarity NPD6168 Clinical (unspecified phase)
0.8553 High Similarity NPD6167 Clinical (unspecified phase)
0.8553 High Similarity NPD6166 Phase 2
0.8533 High Similarity NPD4378 Clinical (unspecified phase)
0.8528 High Similarity NPD4338 Clinical (unspecified phase)
0.8509 High Similarity NPD7054 Approved
0.8491 Intermediate Similarity NPD3926 Phase 2
0.8457 Intermediate Similarity NPD7472 Approved
0.8397 Intermediate Similarity NPD5402 Approved
0.8344 Intermediate Similarity NPD6799 Approved
0.8344 Intermediate Similarity NPD7074 Phase 3
0.8313 Intermediate Similarity NPD6232 Discontinued
0.8303 Intermediate Similarity NPD7808 Phase 3
0.8301 Intermediate Similarity NPD6980 Clinical (unspecified phase)
0.8293 Intermediate Similarity NPD6797 Phase 2
0.8272 Intermediate Similarity NPD7473 Discontinued
0.8258 Intermediate Similarity NPD4380 Phase 2
0.8242 Intermediate Similarity NPD7251 Discontinued
0.8239 Intermediate Similarity NPD919 Approved
0.8228 Intermediate Similarity NPD4868 Clinical (unspecified phase)
0.8217 Intermediate Similarity NPD7819 Suspended
0.8188 Intermediate Similarity NPD1550 Clinical (unspecified phase)
0.8188 Intermediate Similarity NPD1552 Clinical (unspecified phase)
0.8176 Intermediate Similarity NPD4381 Clinical (unspecified phase)
0.8176 Intermediate Similarity NPD1510 Phase 2
0.817 Intermediate Similarity NPD7410 Clinical (unspecified phase)
0.8153 Intermediate Similarity NPD6801 Discontinued
0.8133 Intermediate Similarity NPD1549 Phase 2
0.8101 Intermediate Similarity NPD7096 Clinical (unspecified phase)
0.8063 Intermediate Similarity NPD7075 Discontinued
0.8061 Intermediate Similarity NPD5844 Phase 1
0.8027 Intermediate Similarity NPD1240 Approved
0.8025 Intermediate Similarity NPD6599 Discontinued
0.7975 Intermediate Similarity NPD7411 Suspended
0.7973 Intermediate Similarity NPD1933 Approved
0.7949 Intermediate Similarity NPD5403 Approved
0.7949 Intermediate Similarity NPD920 Approved
0.7937 Intermediate Similarity NPD8443 Clinical (unspecified phase)
0.7935 Intermediate Similarity NPD5401 Approved
0.7933 Intermediate Similarity NPD3748 Approved
0.7919 Intermediate Similarity NPD1607 Approved
0.7895 Intermediate Similarity NPD970 Clinical (unspecified phase)
0.7875 Intermediate Similarity NPD1465 Phase 2
0.7852 Intermediate Similarity NPD447 Suspended
0.7844 Intermediate Similarity NPD7804 Clinical (unspecified phase)
0.7843 Intermediate Similarity NPD1243 Approved
0.7821 Intermediate Similarity NPD642 Clinical (unspecified phase)
0.7805 Intermediate Similarity NPD6959 Discontinued
0.7785 Intermediate Similarity NPD943 Approved
0.777 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.7763 Intermediate Similarity NPD2935 Discontinued
0.7755 Intermediate Similarity NPD6832 Phase 2
0.7751 Intermediate Similarity NPD7993 Clinical (unspecified phase)
0.7692 Intermediate Similarity NPD643 Clinical (unspecified phase)
0.7677 Intermediate Similarity NPD3750 Approved
0.7616 Intermediate Similarity NPD1899 Clinical (unspecified phase)
0.7613 Intermediate Similarity NPD2800 Approved
0.7605 Intermediate Similarity NPD5242 Approved
0.7602 Intermediate Similarity NPD6559 Discontinued
0.759 Intermediate Similarity NPD7199 Phase 2
0.7568 Intermediate Similarity NPD3018 Phase 2
0.756 Intermediate Similarity NPD7852 Clinical (unspecified phase)
0.7535 Intermediate Similarity NPD5536 Phase 2
0.7533 Intermediate Similarity NPD2313 Discontinued
0.7532 Intermediate Similarity NPD1551 Phase 2
0.7532 Intermediate Similarity NPD6143 Clinical (unspecified phase)
0.7531 Intermediate Similarity NPD6385 Approved
0.7531 Intermediate Similarity NPD6386 Approved
0.7517 Intermediate Similarity NPD1529 Clinical (unspecified phase)
0.7517 Intermediate Similarity NPD1547 Clinical (unspecified phase)
0.7516 Intermediate Similarity NPD3226 Approved
0.7515 Intermediate Similarity NPD3749 Approved
0.75 Intermediate Similarity NPD2654 Approved
0.75 Intermediate Similarity NPD7184 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD7421 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD5353 Approved
0.75 Intermediate Similarity NPD230 Phase 1
0.7484 Intermediate Similarity NPD2532 Approved
0.7484 Intermediate Similarity NPD2533 Approved
0.7484 Intermediate Similarity NPD2534 Approved
0.7468 Intermediate Similarity NPD2799 Discontinued
0.7466 Intermediate Similarity NPD2981 Phase 2
0.7456 Intermediate Similarity NPD2403 Approved
0.7455 Intermediate Similarity NPD7768 Phase 2
0.7453 Intermediate Similarity NPD1653 Approved
0.7452 Intermediate Similarity NPD1878 Clinical (unspecified phase)
0.745 Intermediate Similarity NPD1530 Clinical (unspecified phase)
0.744 Intermediate Similarity NPD3787 Discontinued
0.7434 Intermediate Similarity NPD1613 Approved
0.7434 Intermediate Similarity NPD1612 Clinical (unspecified phase)
0.7418 Intermediate Similarity NPD7501 Clinical (unspecified phase)
0.7415 Intermediate Similarity NPD2983 Phase 2
0.7415 Intermediate Similarity NPD2982 Phase 2
0.7401 Intermediate Similarity NPD8397 Clinical (unspecified phase)
0.7383 Intermediate Similarity NPD2798 Approved
0.7378 Intermediate Similarity NPD6844 Discontinued
0.7378 Intermediate Similarity NPD37 Approved
0.7372 Intermediate Similarity NPD2344 Approved
0.7372 Intermediate Similarity NPD2346 Discontinued
0.7368 Intermediate Similarity NPD3751 Discontinued
0.7355 Intermediate Similarity NPD651 Clinical (unspecified phase)
0.7353 Intermediate Similarity NPD7784 Clinical (unspecified phase)
0.7351 Intermediate Similarity NPD3027 Phase 3
0.7349 Intermediate Similarity NPD4967 Phase 2
0.7349 Intermediate Similarity NPD4965 Approved
0.7349 Intermediate Similarity NPD4966 Approved
0.7342 Intermediate Similarity NPD4628 Phase 3
0.7341 Intermediate Similarity NPD5953 Discontinued
0.7338 Intermediate Similarity NPD6651 Approved
0.7329 Intermediate Similarity NPD1940 Clinical (unspecified phase)
0.7315 Intermediate Similarity NPD3266 Approved
0.7315 Intermediate Similarity NPD3267 Approved
0.7308 Intermediate Similarity NPD6100 Approved
0.7308 Intermediate Similarity NPD6099 Approved
0.7296 Intermediate Similarity NPD6190 Approved
0.7262 Intermediate Similarity NPD6234 Discontinued
0.726 Intermediate Similarity NPD17 Approved
0.7257 Intermediate Similarity NPD4419 Clinical (unspecified phase)
0.7244 Intermediate Similarity NPD1509 Clinical (unspecified phase)
0.723 Intermediate Similarity NPD3972 Approved
0.7225 Intermediate Similarity NPD7286 Phase 2
0.7222 Intermediate Similarity NPD7879 Clinical (unspecified phase)
0.7219 Intermediate Similarity NPD9494 Approved
0.7208 Intermediate Similarity NPD4307 Phase 2
0.7205 Intermediate Similarity NPD7390 Discontinued
0.72 Intermediate Similarity NPD1203 Approved
0.719 Intermediate Similarity NPD1296 Phase 2
0.719 Intermediate Similarity NPD3268 Approved
0.7188 Intermediate Similarity NPD2309 Approved
0.7181 Intermediate Similarity NPD4379 Clinical (unspecified phase)
0.7152 Intermediate Similarity NPD1019 Discontinued
0.7152 Intermediate Similarity NPD1471 Phase 3
0.7143 Intermediate Similarity NPD6233 Phase 2
0.7143 Intermediate Similarity NPD5019 Clinical (unspecified phase)
0.7135 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.7134 Intermediate Similarity NPD7033 Discontinued
0.7133 Intermediate Similarity NPD1241 Discontinued
0.7133 Intermediate Similarity NPD5283 Phase 1
0.7123 Intermediate Similarity NPD1548 Phase 1
0.7114 Intermediate Similarity NPD1608 Approved
0.7114 Intermediate Similarity NPD9717 Approved
0.7102 Intermediate Similarity NPD7685 Pre-registration
0.7099 Intermediate Similarity NPD4357 Discontinued
0.7095 Intermediate Similarity NPD8434 Phase 2
0.7089 Intermediate Similarity NPD3539 Phase 1
0.7086 Intermediate Similarity NPD2797 Approved
0.7059 Intermediate Similarity NPD4908 Phase 1
0.7055 Intermediate Similarity NPD3146 Approved
0.7055 Intermediate Similarity NPD3688 Clinical (unspecified phase)
0.7047 Intermediate Similarity NPD422 Phase 1
0.7044 Intermediate Similarity NPD3540 Phase 1
0.7035 Intermediate Similarity NPD7229 Phase 3
0.7025 Intermediate Similarity NPD4308 Phase 3
0.702 Intermediate Similarity NPD3225 Approved
0.7019 Intermediate Similarity NPD6398 Clinical (unspecified phase)
0.6982 Remote Similarity NPD5977 Approved
0.6982 Remote Similarity NPD5978 Approved
0.6982 Remote Similarity NPD4288 Approved
0.6975 Remote Similarity NPD3887 Approved
0.6973 Remote Similarity NPD8090 Clinical (unspecified phase)
0.6971 Remote Similarity NPD7228 Approved
0.6968 Remote Similarity NPD4907 Clinical (unspecified phase)
0.6968 Remote Similarity NPD5005 Approved
0.6968 Remote Similarity NPD5006 Approved
0.6968 Remote Similarity NPD6798 Discontinued
0.6968 Remote Similarity NPD411 Approved
0.6966 Remote Similarity NPD7549 Discontinued
0.6964 Remote Similarity NPD6280 Approved
0.6964 Remote Similarity NPD6279 Approved
0.6959 Remote Similarity NPD9268 Approved
0.6957 Remote Similarity NPD1652 Phase 2
0.6957 Remote Similarity NPD4360 Phase 2
0.6957 Remote Similarity NPD4363 Phase 3
0.6952 Remote Similarity NPD6782 Approved
0.6952 Remote Similarity NPD6780 Approved
0.6952 Remote Similarity NPD6777 Approved
0.6952 Remote Similarity NPD6781 Approved
0.6952 Remote Similarity NPD6778 Approved
0.6952 Remote Similarity NPD6779 Approved
0.6952 Remote Similarity NPD6776 Approved
0.6951 Remote Similarity NPD7004 Clinical (unspecified phase)
0.6948 Remote Similarity NPD1008 Clinical (unspecified phase)
0.6937 Remote Similarity NPD2355 Clinical (unspecified phase)
0.6937 Remote Similarity NPD2353 Approved
0.6936 Remote Similarity NPD5710 Approved
0.6936 Remote Similarity NPD5711 Approved
0.6933 Remote Similarity NPD1610 Phase 2
0.6927 Remote Similarity NPD8313 Approved
0.6927 Remote Similarity NPD8312 Approved

  Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data