Structure

Physi-Chem Properties

Molecular Weight:  1325.11
Volume:  1199.05
LogP:  8.232
LogD:  2.417
LogS:  -3.922
# Rotatable Bonds:  11
TPSA:  346.35
# H-Bond Aceptor:  22
# H-Bond Donor:  12
# Rings:  12
# Heavy Atoms:  28

MedChem Properties

QED Drug-Likeness Score:  0.047
Synthetic Accessibility Score:  7.97
Fsp3:  0.148
Lipinski Rule-of-5:  Rejected
Pfizer Rule:  Accepted
GSK Rule:  Rejected
BMS Rule:  3
Golden Triangle Rule:  Rejected
Chelating Alert:  0
PAINS Alert:  0

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

Caco-2 Permeability:  -6.416
MDCK Permeability:  5.083640644443221e-06
Pgp-inhibitor:  0.953
Pgp-substrate:  0.992
Human Intestinal Absorption (HIA):  0.948
20% Bioavailability (F20%):  0.996
30% Bioavailability (F30%):  1.0

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):  0.008
Plasma Protein Binding (PPB):  104.14885711669922%
Volume Distribution (VD):  0.243
Pgp-substrate:  0.4296169579029083%

ADMET: Metabolism

CYP1A2-inhibitor:  0.01
CYP1A2-substrate:  0.013
CYP2C19-inhibitor:  0.455
CYP2C19-substrate:  0.025
CYP2C9-inhibitor:  0.279
CYP2C9-substrate:  0.968
CYP2D6-inhibitor:  0.001
CYP2D6-substrate:  0.07
CYP3A4-inhibitor:  0.481
CYP3A4-substrate:  0.064

ADMET: Excretion

Clearance (CL):  -0.565
Half-life (T1/2):  0.025

ADMET: Toxicity

hERG Blockers:  0.053
Human Hepatotoxicity (H-HT):  0.987
Drug-inuced Liver Injury (DILI):  0.986
AMES Toxicity:  0.003
Rat Oral Acute Toxicity:  0.237
Maximum Recommended Daily Dose:  0.99
Skin Sensitization:  0.019
Carcinogencity:  0.003
Eye Corrosion:  0.003
Eye Irritation:  0.001
Respiratory Toxicity:  0.016

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  Natural Product: NPC9482

Natural Product ID:  NPC9482
Common Name*:   Isocomplestatin
IUPAC Name:   n.a.
Synonyms:   Chloropeptin II; Isocomplestatin
Standard InCHIKey:  JJGZGELTZPACID-OTLJHNKQSA-N
Standard InCHI:  InChI=1S/C61H45Cl6N7O15/c1-74-44(56(82)73-49(61(87)88)25-4-7-32(75)8-5-25)12-24-2-9-33(10-3-24)89-45-22-27-13-35(51(45)77)26-6-11-34-31(23-68-42(34)20-26)21-43(69-59(85)50(76)30-18-40(66)54(80)41(67)19-30)55(81)70-47(28-14-36(62)52(78)37(63)15-28)57(83)71-46(27)58(84)72-48(60(74)86)29-16-38(64)53(79)39(65)17-29/h2-11,13-20,22-23,43-44,46-49,68,75,77-80H,12,21H2,1H3,(H,69,85)(H,70,81)(H,71,83)(H,72,84)(H,73,82)(H,87,88)/t43-,44+,46-,47-,48-,49-/m1/s1
SMILES:  CN1[C@@H](Cc2ccc(cc2)Oc2cc3cc(-c4ccc5c(C[C@H](C(=N[C@H](c6cc(c(c(c6)Cl)O)Cl)C(=N[C@H]3C(=N[C@H](c3cc(c(c(c3)Cl)O)Cl)C1=O)O)O)O)NC(=O)C(=O)c1cc(c(c(c1)Cl)O)Cl)c[nH]c5c4)c2O)C(=N[C@H](c1ccc(cc1)O)C(=O)O)O
Synthetic Gene Cluster:   BGC0000326;
ChEMBL Identifier:   CHEMBL506605
PubChem CID:   16134403
Chemical Classification**:  
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0000264] Organic acids and derivatives
      • [CHEMONTID:0000265] Carboxylic acids and derivatives
        • [CHEMONTID:0000013] Amino acids, peptides, and analogues
          • [CHEMONTID:0000348] Peptides
            • [CHEMONTID:0004831] Oligopeptides

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10344559]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10344578]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10348041]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10604756]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10695669]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10724004]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10994816]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[11099231]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[11132958]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[11374972]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[11473415]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[14738393]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. Australian n.a. PMID[15497950]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[15813185]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[15844966]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[15974616]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[16180833]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[1666120]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[16724845]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[16830891]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[16872146]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17125235]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17315965]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17551212]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17608531]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17844998]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17887721]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17917237]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18044841]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. Indonesian n.a. PMID[18081255]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18081255]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18205372]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18327911]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. Northwest Territories, Canada 1995 PMID[18327911]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18666798]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18776684]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[19007176]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[19129624]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[19191549]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[19856955]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[19883065]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[20092333]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[20545334]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[20836523]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21028889]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21028891]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. mycelium n.a. PMID[21090727]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21314175]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. mycelium n.a. PMID[21639131]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21728289]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. latex n.a. PMID[21751787]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21807523]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21873059]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. latex n.a. PMID[21879726]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. mycelium n.a. PMID[22145663]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[22574670]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[22583058]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[22591466]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[22758660]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[22775474]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[23387796]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[23662937]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[24592993]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[24754815]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[24878306]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[24964393]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25211234]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25455147]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25495422]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25537064]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25918793]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25934225]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[26035239]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[26465675]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[26798949]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[26905826]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[31013087]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[31298537]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[31894983]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[32298122]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[8501018]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. mycelium n.a. PMID[8784423]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[8931733]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[8982334]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9031666]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9031676]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9066767]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9066768]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9186568]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9531983]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. mycelium n.a. PMID[9711246]

☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  NP Quantity Composition/Concentration

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference

☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT1112 Individual Protein T-cell surface antigen CD4 Homo sapiens IC50 = 130.0 nM PMID[513587]
NPT12 Individual Protein Human immunodeficiency virus type 1 integrase Human immunodeficiency virus 1 IC50 = 200.0 nM PMID[513588]
NPT12 Individual Protein Human immunodeficiency virus type 1 integrase Human immunodeficiency virus 1 IC50 = 500.0 nM PMID[513588]
NPT12 Individual Protein Human immunodeficiency virus type 1 integrase Human immunodeficiency virus 1 IC50 = 3000.0 nM PMID[513588]
NPT12 Individual Protein Human immunodeficiency virus type 1 integrase Human immunodeficiency virus 1 IC50 = 4000.0 nM PMID[513588]
NPT2 Others Unspecified IC50 = 420.0 nM PMID[513587]
NPT2 Others Unspecified IC50 = 10.0 nM PMID[513587]
NPT1113 Organism Simian immunodeficiency virus Simian immunodeficiency virus IC50 = 100.0 nM PMID[513588]
NPT1114 Organism Human immunodeficiency virus Human immunodeficiency virus IC50 = 200.0 nM PMID[513588]
NPT1115 Organism Avian myeloblastosis virus Avian myeloblastosis virus IC50 = 250.0 nM PMID[513588]
NPT1116 Organism Feline immunodeficiency virus Feline immunodeficiency virus IC50 = 500.0 nM PMID[513588]
NPT2 Others Unspecified IC50 = 2000.0 nM PMID[513588]
NPT1114 Organism Human immunodeficiency virus Human immunodeficiency virus IC50 = 3000.0 nM PMID[513588]
NPT24 Organism Human immunodeficiency virus 1 Human immunodeficiency virus 1 Virucidal = 5.0 uM PMID[513588]

☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

  Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC9482 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9771 High Similarity NPC116701
0.8609 High Similarity NPC329480
0.8513 High Similarity NPC323858
0.7526 Intermediate Similarity NPC172355
0.7447 Intermediate Similarity NPC132385
0.7363 Intermediate Similarity NPC210296
0.734 Intermediate Similarity NPC191489
0.7309 Intermediate Similarity NPC15406
0.7286 Intermediate Similarity NPC326363
0.7276 Intermediate Similarity NPC77878
0.7276 Intermediate Similarity NPC181081
0.7247 Intermediate Similarity NPC478009
0.7247 Intermediate Similarity NPC478010
0.7244 Intermediate Similarity NPC478006
0.7244 Intermediate Similarity NPC129897
0.7239 Intermediate Similarity NPC24370
0.7239 Intermediate Similarity NPC319232
0.7238 Intermediate Similarity NPC88923
0.7238 Intermediate Similarity NPC100734
0.7238 Intermediate Similarity NPC315634
0.7222 Intermediate Similarity NPC24019
0.7216 Intermediate Similarity NPC108342
0.7214 Intermediate Similarity NPC183537
0.7206 Intermediate Similarity NPC323198
0.7206 Intermediate Similarity NPC323752
0.719 Intermediate Similarity NPC182907
0.719 Intermediate Similarity NPC189903
0.7179 Intermediate Similarity NPC325976
0.7158 Intermediate Similarity NPC208522
0.7123 Intermediate Similarity NPC216369
0.7113 Intermediate Similarity NPC472589
0.7112 Intermediate Similarity NPC217554
0.7102 Intermediate Similarity NPC472588
0.7101 Intermediate Similarity NPC166722
0.7098 Intermediate Similarity NPC89549
0.7097 Intermediate Similarity NPC284141
0.7093 Intermediate Similarity NPC315467
0.708 Intermediate Similarity NPC22481
0.7068 Intermediate Similarity NPC315499
0.7063 Intermediate Similarity NPC284685
0.7063 Intermediate Similarity NPC210434
0.7055 Intermediate Similarity NPC90875
0.7044 Intermediate Similarity NPC233334
0.7042 Intermediate Similarity NPC314882
0.704 Intermediate Similarity NPC11408
0.704 Intermediate Similarity NPC82472
0.7036 Intermediate Similarity NPC124313
0.7033 Intermediate Similarity NPC278525
0.7029 Intermediate Similarity NPC272549
0.7026 Intermediate Similarity NPC169716
0.7025 Intermediate Similarity NPC84164
0.7025 Intermediate Similarity NPC207283
0.7021 Intermediate Similarity NPC270515
0.7019 Intermediate Similarity NPC266931
0.6975 Remote Similarity NPC78609
0.6962 Remote Similarity NPC473639
0.6957 Remote Similarity NPC255800
0.6957 Remote Similarity NPC96584
0.6949 Remote Similarity NPC478011
0.6949 Remote Similarity NPC478012
0.6947 Remote Similarity NPC153400
0.6942 Remote Similarity NPC15801
0.6942 Remote Similarity NPC314056
0.6934 Remote Similarity NPC478083
0.6934 Remote Similarity NPC318068
0.6931 Remote Similarity NPC253675
0.6926 Remote Similarity NPC314176
0.6912 Remote Similarity NPC137353
0.6906 Remote Similarity NPC295228
0.6889 Remote Similarity NPC74360
0.6887 Remote Similarity NPC472842
0.6884 Remote Similarity NPC201508
0.6882 Remote Similarity NPC28945
0.6873 Remote Similarity NPC194740
0.6871 Remote Similarity NPC478013
0.6868 Remote Similarity NPC475844
0.6868 Remote Similarity NPC148889
0.6851 Remote Similarity NPC258048
0.6835 Remote Similarity NPC284888
0.6833 Remote Similarity NPC41501
0.6828 Remote Similarity NPC236668
0.6821 Remote Similarity NPC473183
0.6821 Remote Similarity NPC184225
0.6815 Remote Similarity NPC246658
0.6813 Remote Similarity NPC118121
0.681 Remote Similarity NPC277351
0.681 Remote Similarity NPC316411
0.6809 Remote Similarity NPC49672
0.6803 Remote Similarity NPC146976
0.6801 Remote Similarity NPC54066
0.68 Remote Similarity NPC45048
0.6799 Remote Similarity NPC49547
0.6799 Remote Similarity NPC244897
0.6794 Remote Similarity NPC67401
0.6793 Remote Similarity NPC476514
0.679 Remote Similarity NPC204446
0.6782 Remote Similarity NPC303374
0.6777 Remote Similarity NPC280799
0.6774 Remote Similarity NPC207620
0.6767 Remote Similarity NPC279589
0.6763 Remote Similarity NPC315062
0.6763 Remote Similarity NPC267853
0.6762 Remote Similarity NPC476995
0.6762 Remote Similarity NPC285343
0.6761 Remote Similarity NPC316224
0.676 Remote Similarity NPC314743
0.6752 Remote Similarity NPC280272
0.675 Remote Similarity NPC182222
0.675 Remote Similarity NPC473184
0.6747 Remote Similarity NPC244543
0.6738 Remote Similarity NPC207686
0.6738 Remote Similarity NPC321592
0.6738 Remote Similarity NPC54803
0.6738 Remote Similarity NPC101350
0.6736 Remote Similarity NPC473800
0.6729 Remote Similarity NPC316981
0.6727 Remote Similarity NPC223409
0.6726 Remote Similarity NPC477549
0.6725 Remote Similarity NPC63971
0.6725 Remote Similarity NPC478081
0.6725 Remote Similarity NPC91868
0.6724 Remote Similarity NPC478045
0.6724 Remote Similarity NPC215837
0.6715 Remote Similarity NPC118559
0.6715 Remote Similarity NPC304307
0.6715 Remote Similarity NPC192712
0.6715 Remote Similarity NPC124920
0.6715 Remote Similarity NPC121069
0.6715 Remote Similarity NPC34580
0.6714 Remote Similarity NPC475816
0.6714 Remote Similarity NPC172222
0.6713 Remote Similarity NPC319774
0.6703 Remote Similarity NPC260434
0.6702 Remote Similarity NPC142385
0.6702 Remote Similarity NPC235685
0.6701 Remote Similarity NPC53534
0.6701 Remote Similarity NPC26543
0.67 Remote Similarity NPC260909
0.6691 Remote Similarity NPC27041
0.6691 Remote Similarity NPC274640
0.6691 Remote Similarity NPC122463
0.6691 Remote Similarity NPC100547
0.669 Remote Similarity NPC119134
0.669 Remote Similarity NPC477066
0.6689 Remote Similarity NPC227824
0.6679 Remote Similarity NPC470018
0.6679 Remote Similarity NPC276657
0.6679 Remote Similarity NPC196718
0.6679 Remote Similarity NPC478157
0.6678 Remote Similarity NPC473188
0.6678 Remote Similarity NPC152620
0.6667 Remote Similarity NPC478080
0.6667 Remote Similarity NPC281049
0.6667 Remote Similarity NPC95240
0.6667 Remote Similarity NPC72905
0.6667 Remote Similarity NPC473540
0.6667 Remote Similarity NPC322135
0.6655 Remote Similarity NPC74575
0.6655 Remote Similarity NPC473182
0.6655 Remote Similarity NPC220852
0.6655 Remote Similarity NPC261251
0.6654 Remote Similarity NPC470020
0.6645 Remote Similarity NPC196449
0.6645 Remote Similarity NPC314222
0.6644 Remote Similarity NPC165964
0.6644 Remote Similarity NPC1203
0.6643 Remote Similarity NPC21638
0.6643 Remote Similarity NPC14288
0.6643 Remote Similarity NPC6786
0.6643 Remote Similarity NPC125597
0.6643 Remote Similarity NPC184680
0.6643 Remote Similarity NPC474688
0.6643 Remote Similarity NPC473449
0.6643 Remote Similarity NPC474701
0.6633 Remote Similarity NPC470042
0.6632 Remote Similarity NPC17437
0.6631 Remote Similarity NPC208898
0.6631 Remote Similarity NPC39370
0.6623 Remote Similarity NPC237901
0.6623 Remote Similarity NPC195788
0.662 Remote Similarity NPC131486
0.662 Remote Similarity NPC470784
0.662 Remote Similarity NPC470785
0.6619 Remote Similarity NPC102593
0.6619 Remote Similarity NPC474192
0.6619 Remote Similarity NPC475720
0.6619 Remote Similarity NPC473186
0.6619 Remote Similarity NPC214142
0.6618 Remote Similarity NPC323969
0.6611 Remote Similarity NPC471303
0.6608 Remote Similarity NPC473187
0.6608 Remote Similarity NPC478082
0.6608 Remote Similarity NPC477067
0.6607 Remote Similarity NPC476996
0.6607 Remote Similarity NPC209174
0.6607 Remote Similarity NPC476998
0.6606 Remote Similarity NPC51388
0.6606 Remote Similarity NPC23614
0.6606 Remote Similarity NPC303658
0.6606 Remote Similarity NPC100079

  Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC9482 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.7583 Intermediate Similarity NPD8279 Clinical (unspecified phase)
0.7473 Intermediate Similarity NPD8463 Approved
0.7391 Intermediate Similarity NPD8350 Clinical (unspecified phase)
0.7359 Intermediate Similarity NPD5450 Discontinued
0.7358 Intermediate Similarity NPD6745 Discontinued
0.734 Intermediate Similarity NPD7708 Approved
0.7279 Intermediate Similarity NPD6530 Approved
0.7279 Intermediate Similarity NPD6531 Approved
0.727 Intermediate Similarity NPD8091 Phase 3
0.7266 Intermediate Similarity NPD7658 Phase 2
0.7238 Intermediate Similarity NPD7803 Approved
0.7235 Intermediate Similarity NPD8405 Clinical (unspecified phase)
0.7143 Intermediate Similarity NPD5040 Clinical (unspecified phase)
0.7117 Intermediate Similarity NPD5482 Discontinued
0.7113 Intermediate Similarity NPD7689 Approved
0.7091 Intermediate Similarity NPD4454 Phase 2
0.7063 Intermediate Similarity NPD7955 Approved
0.7063 Intermediate Similarity NPD7956 Approved
0.705 Intermediate Similarity NPD7417 Discontinued
0.7036 Intermediate Similarity NPD7792 Phase 1
0.7036 Intermediate Similarity NPD5483 Clinical (unspecified phase)
0.7034 Intermediate Similarity NPD7998 Clinical (unspecified phase)
0.7026 Intermediate Similarity NPD8310 Clinical (unspecified phase)
0.7022 Intermediate Similarity NPD7994 Phase 2
0.7018 Intermediate Similarity NPD7558 Phase 2
0.701 Intermediate Similarity NPD7393 Clinical (unspecified phase)
0.6984 Remote Similarity NPD8524 Approved
0.6982 Remote Similarity NPD4885 Approved
0.6982 Remote Similarity NPD4926 Clinical (unspecified phase)
0.6969 Remote Similarity NPD7169 Suspended
0.6966 Remote Similarity NPD5612 Discontinued
0.6961 Remote Similarity NPD8102 Discontinued
0.696 Remote Similarity NPD7268 Clinical (unspecified phase)
0.6953 Remote Similarity NPD7885 Phase 2
0.6953 Remote Similarity NPD7886 Phase 2
0.6947 Remote Similarity NPD7859 Phase 2
0.6936 Remote Similarity NPD7872 Phase 2
0.6931 Remote Similarity NPD8349 Phase 1
0.6918 Remote Similarity NPD7673 Phase 3
0.6917 Remote Similarity NPD8093 Discontinued
0.6912 Remote Similarity NPD6503 Clinical (unspecified phase)
0.6906 Remote Similarity NPD7853 Phase 2
0.6904 Remote Similarity NPD6716 Phase 1
0.6898 Remote Similarity NPD3259 Approved
0.6893 Remote Similarity NPD2921 Clinical (unspecified phase)
0.6891 Remote Similarity NPD3243 Approved
0.6877 Remote Similarity NPD7823 Clinical (unspecified phase)
0.6877 Remote Similarity NPD6525 Clinical (unspecified phase)
0.6875 Remote Similarity NPD6824 Clinical (unspecified phase)
0.6863 Remote Similarity NPD6242 Discontinued
0.6852 Remote Similarity NPD7395 Discontinued
0.685 Remote Similarity NPD7548 Discontinued
0.6837 Remote Similarity NPD6983 Approved
0.6836 Remote Similarity NPD4328 Approved
0.6828 Remote Similarity NPD7690 Clinical (unspecified phase)
0.6827 Remote Similarity NPD3258 Approved
0.6823 Remote Similarity NPD1867 Approved
0.681 Remote Similarity NPD2951 Discontinued
0.68 Remote Similarity NPD7426 Phase 1
0.68 Remote Similarity NPD3263 Phase 3
0.68 Remote Similarity NPD7603 Discontinued
0.6797 Remote Similarity NPD6727 Phase 2
0.679 Remote Similarity NPD5632 Approved
0.6789 Remote Similarity NPD3217 Phase 2
0.6787 Remote Similarity NPD5801 Clinical (unspecified phase)
0.6775 Remote Similarity NPD4845 Discontinued
0.6774 Remote Similarity NPD4373 Phase 2
0.6774 Remote Similarity NPD6494 Phase 2
0.6766 Remote Similarity NPD8046 Discontinued
0.6751 Remote Similarity NPD7710 Clinical (unspecified phase)
0.6749 Remote Similarity NPD7576 Discontinued
0.6746 Remote Similarity NPD6773 Clinical (unspecified phase)
0.6727 Remote Similarity NPD7589 Clinical (unspecified phase)
0.6726 Remote Similarity NPD3006 Discontinued
0.6725 Remote Similarity NPD6517 Phase 3
0.6716 Remote Similarity NPD8149 Discontinued
0.6704 Remote Similarity NPD8094 Discontinued
0.6703 Remote Similarity NPD1466 Phase 3
0.6703 Remote Similarity NPD1467 Approved
0.6701 Remote Similarity NPD8244 Phase 2
0.67 Remote Similarity NPD8460 Approved
0.67 Remote Similarity NPD8459 Approved
0.669 Remote Similarity NPD6963 Approved
0.669 Remote Similarity NPD6964 Approved
0.6689 Remote Similarity NPD7181 Phase 3
0.6679 Remote Similarity NPD3257 Approved
0.6679 Remote Similarity NPD5902 Approved
0.6679 Remote Similarity NPD5903 Approved
0.6667 Remote Similarity NPD4875 Phase 3
0.6667 Remote Similarity NPD7706 Clinical (unspecified phase)
0.6667 Remote Similarity NPD7862 Clinical (unspecified phase)
0.6667 Remote Similarity NPD4876 Phase 3
0.6667 Remote Similarity NPD5866 Approved
0.6667 Remote Similarity NPD4558 Phase 2
0.6667 Remote Similarity NPD7547 Clinical (unspecified phase)
0.6667 Remote Similarity NPD4952 Phase 3
0.6667 Remote Similarity NPD6838 Clinical (unspecified phase)
0.6667 Remote Similarity NPD5469 Phase 3
0.6655 Remote Similarity NPD8017 Clinical (unspecified phase)
0.6655 Remote Similarity NPD7025 Clinical (unspecified phase)
0.6655 Remote Similarity NPD8016 Phase 3
0.6642 Remote Similarity NPD1322 Clinical (unspecified phase)
0.6641 Remote Similarity NPD7948 Phase 1
0.6632 Remote Similarity NPD6790 Phase 1
0.6632 Remote Similarity NPD8358 Approved
0.6631 Remote Similarity NPD5559 Phase 2
0.663 Remote Similarity NPD7470 Discontinued
0.6623 Remote Similarity NPD8467 Approved
0.6623 Remote Similarity NPD8466 Approved
0.6623 Remote Similarity NPD8429 Approved
0.6623 Remote Similarity NPD8427 Approved
0.6623 Remote Similarity NPD8465 Approved
0.6623 Remote Similarity NPD8428 Approved
0.662 Remote Similarity NPD4314 Approved
0.662 Remote Similarity NPD4313 Approved
0.6611 Remote Similarity NPD7925 Phase 2
0.6611 Remote Similarity NPD7924 Phase 2
0.6599 Remote Similarity NPD8284 Discontinued
0.6597 Remote Similarity NPD5488 Discontinued
0.6596 Remote Similarity NPD6741 Clinical (unspecified phase)
0.6593 Remote Similarity NPD6803 Clinical (unspecified phase)
0.659 Remote Similarity NPD7766 Phase 2
0.6589 Remote Similarity NPD8363 Approved
0.6589 Remote Similarity NPD8364 Approved
0.658 Remote Similarity NPD7947 Clinical (unspecified phase)
0.6575 Remote Similarity NPD7405 Clinical (unspecified phase)
0.6574 Remote Similarity NPD7868 Clinical (unspecified phase)
0.6569 Remote Similarity NPD4989 Phase 2
0.6566 Remote Similarity NPD484 Approved
0.6562 Remote Similarity NPD4349 Approved
0.6562 Remote Similarity NPD4350 Approved
0.6561 Remote Similarity NPD7729 Clinical (unspecified phase)
0.6559 Remote Similarity NPD5640 Discontinued
0.6559 Remote Similarity NPD8289 Discontinued
0.6557 Remote Similarity NPD7538 Clinical (unspecified phase)
0.6551 Remote Similarity NPD1483 Discontinued
0.6548 Remote Similarity NPD5022 Discontinued
0.6548 Remote Similarity NPD5479 Discontinued
0.6545 Remote Similarity NPD6568 Discontinued
0.6545 Remote Similarity NPD8365 Clinical (unspecified phase)
0.6544 Remote Similarity NPD7069 Discontinued
0.6538 Remote Similarity NPD4309 Approved
0.6536 Remote Similarity NPD8426 Approved
0.6536 Remote Similarity NPD8425 Approved
0.653 Remote Similarity NPD5901 Discontinued
0.6529 Remote Similarity NPD8101 Phase 3
0.6527 Remote Similarity NPD7166 Approved
0.6527 Remote Similarity NPD7165 Approved
0.6526 Remote Similarity NPD4958 Clinical (unspecified phase)
0.6525 Remote Similarity NPD6962 Phase 2
0.6525 Remote Similarity NPD7688 Phase 1
0.6525 Remote Similarity NPD8238 Clinical (unspecified phase)
0.6522 Remote Similarity NPD3763 Approved
0.6511 Remote Similarity NPD6160 Clinical (unspecified phase)
0.651 Remote Similarity NPD6456 Discontinued
0.6507 Remote Similarity NPD7927 Clinical (unspecified phase)
0.6505 Remote Similarity NPD8525 Approved
0.6502 Remote Similarity NPD7655 Discontinued
0.6495 Remote Similarity NPD1936 Clinical (unspecified phase)
0.6483 Remote Similarity NPD6460 Clinical (unspecified phase)
0.6481 Remote Similarity NPD1392 Approved
0.6481 Remote Similarity NPD7222 Phase 2
0.6479 Remote Similarity NPD7951 Approved
0.6479 Remote Similarity NPD7790 Approved
0.6479 Remote Similarity NPD7952 Approved
0.6479 Remote Similarity NPD7789 Approved
0.6479 Remote Similarity NPD7953 Approved
0.6479 Remote Similarity NPD7950 Approved
0.6479 Remote Similarity NPD7791 Approved
0.6471 Remote Similarity NPD7413 Phase 3
0.6469 Remote Similarity NPD1225 Phase 2
0.6469 Remote Similarity NPD1224 Phase 2
0.6467 Remote Similarity NPD8421 Discontinued
0.6466 Remote Similarity NPD1505 Phase 2
0.6462 Remote Similarity NPD7194 Discontinued
0.6461 Remote Similarity NPD7407 Discontinued
0.6458 Remote Similarity NPD5658 Approved
0.6453 Remote Similarity NPD7772 Phase 3
0.6452 Remote Similarity NPD7219 Approved
0.6452 Remote Similarity NPD1856 Discontinued
0.6452 Remote Similarity NPD8356 Approved
0.6452 Remote Similarity NPD7221 Approved
0.6447 Remote Similarity NPD5066 Phase 2
0.6447 Remote Similarity NPD5067 Phase 2
0.6444 Remote Similarity NPD7796 Approved
0.6444 Remote Similarity NPD3003 Approved
0.6444 Remote Similarity NPD7797 Approved
0.6441 Remote Similarity NPD8442 Discontinued
0.6439 Remote Similarity NPD7180 Phase 3
0.6436 Remote Similarity NPD5417 Clinical (unspecified phase)
0.6429 Remote Similarity NPD6724 Clinical (unspecified phase)
0.6426 Remote Similarity NPD8100 Phase 3
0.6421 Remote Similarity NPD8023 Phase 2
0.6421 Remote Similarity NPD8024 Phase 2
0.6421 Remote Similarity NPD7453 Approved
0.6421 Remote Similarity NPD5429 Discontinued
0.6421 Remote Similarity NPD7452 Approved
0.6418 Remote Similarity NPD8430 Approved
0.6411 Remote Similarity NPD5805 Approved
0.6403 Remote Similarity NPD6974 Phase 3

  Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data