Structure

Physi-Chem Properties

Molecular Weight:  1325.11
Volume:  1199.05
LogP:  8.221
LogD:  2.446
LogS:  -4.324
# Rotatable Bonds:  11
TPSA:  346.35
# H-Bond Aceptor:  22
# H-Bond Donor:  12
# Rings:  11
# Heavy Atoms:  28

MedChem Properties

QED Drug-Likeness Score:  0.047
Synthetic Accessibility Score:  7.985
Fsp3:  0.148
Lipinski Rule-of-5:  Rejected
Pfizer Rule:  Accepted
GSK Rule:  Rejected
BMS Rule:  3
Golden Triangle Rule:  Rejected
Chelating Alert:  0
PAINS Alert:  0

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

Caco-2 Permeability:  -6.419
MDCK Permeability:  5.175769729248714e-06
Pgp-inhibitor:  0.939
Pgp-substrate:  0.991
Human Intestinal Absorption (HIA):  0.959
20% Bioavailability (F20%):  0.998
30% Bioavailability (F30%):  1.0

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):  0.008
Plasma Protein Binding (PPB):  104.23480987548828%
Volume Distribution (VD):  0.242
Pgp-substrate:  0.43468084931373596%

ADMET: Metabolism

CYP1A2-inhibitor:  0.01
CYP1A2-substrate:  0.016
CYP2C19-inhibitor:  0.503
CYP2C19-substrate:  0.026
CYP2C9-inhibitor:  0.377
CYP2C9-substrate:  0.973
CYP2D6-inhibitor:  0.003
CYP2D6-substrate:  0.071
CYP3A4-inhibitor:  0.587
CYP3A4-substrate:  0.082

ADMET: Excretion

Clearance (CL):  -0.578
Half-life (T1/2):  0.027

ADMET: Toxicity

hERG Blockers:  0.048
Human Hepatotoxicity (H-HT):  0.984
Drug-inuced Liver Injury (DILI):  0.989
AMES Toxicity:  0.003
Rat Oral Acute Toxicity:  0.208
Maximum Recommended Daily Dose:  0.99
Skin Sensitization:  0.023
Carcinogencity:  0.003
Eye Corrosion:  0.003
Eye Irritation:  0.001
Respiratory Toxicity:  0.03

Download Data

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Structure MOL file  
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Biological Activities  
Similar NPs/Drugs  

  Natural Product: NPC116701

Natural Product ID:  NPC116701
Common Name*:   Chloropeptin
IUPAC Name:   n.a.
Synonyms:   Chloropeptin
Standard InCHIKey:  FRRCHJPQSWYJSH-OZICGBTHSA-N
Standard InCHI:  InChI=1S/C61H45Cl6N7O15/c1-74-43(56(82)73-48(61(87)88)25-7-9-31(75)10-8-25)13-24-5-11-32(12-6-24)89-44-22-26-14-35(51(44)77)34-4-2-3-33-30(23-68-49(33)34)21-42(69-59(85)50(76)29-19-40(66)54(80)41(67)20-29)55(81)70-46(27-15-36(62)52(78)37(63)16-27)57(83)71-45(26)58(84)72-47(60(74)86)28-17-38(64)53(79)39(65)18-28/h2-12,14-20,22-23,42-43,45-48,68,75,77-80H,13,21H2,1H3,(H,69,85)(H,70,81)(H,71,83)(H,72,84)(H,73,82)(H,87,88)/t42-,43+,45-,46-,47-,48-/m1/s1
SMILES:  CN1[C@@H](Cc2ccc(cc2)Oc2cc3cc(-c4cccc5c(C[C@H](C(=N[C@H](c6cc(c(c(c6)Cl)O)Cl)C(=N[C@H]3C(=N[C@H](c3cc(c(c(c3)Cl)O)Cl)C1=O)O)O)O)NC(=O)C(=O)c1cc(c(c(c1)Cl)O)Cl)c[nH]c45)c2O)C(=N[C@H](c1ccc(cc1)O)C(=O)O)O
Synthetic Gene Cluster:   n.a.
ChEMBL Identifier:   CHEMBL525803
PubChem CID:   16134407
Chemical Classification**:  
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0000264] Organic acids and derivatives
      • [CHEMONTID:0000265] Carboxylic acids and derivatives
        • [CHEMONTID:0000013] Amino acids, peptides, and analogues
          • [CHEMONTID:0000348] Peptides
            • [CHEMONTID:0004831] Oligopeptides

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10344559]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10344578]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10348041]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10604756]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10695669]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10724004]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[10994816]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[11099231]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[11132958]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[11374972]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[11473415]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[14738393]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. Australian n.a. PMID[15497950]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[15813185]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[15844966]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[15974616]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[16180833]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[1666120]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[16724845]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[16830891]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[16872146]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17125235]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17315965]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17551212]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17608531]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17844998]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17887721]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[17917237]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18044841]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. Indonesian n.a. PMID[18081255]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18081255]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18205372]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. Northwest Territories, Canada 1995 PMID[18327911]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18327911]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18666798]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[18776684]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[19007176]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[19129624]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[19191549]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[19856955]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[19883065]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[20092333]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[20545334]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[20836523]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21028889]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21028891]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. mycelium n.a. PMID[21090727]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21314175]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. mycelium n.a. PMID[21639131]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21728289]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. latex n.a. PMID[21751787]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21807523]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[21873059]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. latex n.a. PMID[21879726]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. mycelium n.a. PMID[22145663]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[22574670]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[22583058]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[22591466]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[22758660]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[22775474]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[23387796]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[23662937]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[24592993]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[24754815]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[24878306]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[24964393]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25211234]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25455147]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25495422]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25537064]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25918793]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[25934225]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[26035239]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[26465675]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[26798949]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[26905826]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[31013087]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[31298537]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[31894983]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[32298122]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[8501018]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. mycelium n.a. PMID[8784423]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[8931733]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[8982334]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9031666]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9031676]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9066767]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9066768]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9186568]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[9531983]
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria n.a. mycelium n.a. PMID[9711246]

☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  NP Quantity Composition/Concentration

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference

☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT1112 Individual Protein T-cell surface antigen CD4 Homo sapiens IC50 = 130.0 nM PMID[506591]
NPT12 Individual Protein Human immunodeficiency virus type 1 integrase Human immunodeficiency virus 1 IC50 = 400.0 nM PMID[506593]
NPT12 Individual Protein Human immunodeficiency virus type 1 integrase Human immunodeficiency virus 1 IC50 = 5000.0 nM PMID[506593]
NPT2 Others Unspecified IC50 = 380.0 nM PMID[506591]
NPT2 Others Unspecified IC50 = 10.0 nM PMID[506591]
NPT2 Others Unspecified IC50 = 2000.0 nM PMID[506592]
NPT2 Others Unspecified IC50 = 32000.0 nM PMID[506592]
NPT24 Organism Human immunodeficiency virus 1 Human immunodeficiency virus 1 Virucidal = 5.0 uM PMID[506593]

☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

  Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC116701 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9771 High Similarity NPC9482
0.8383 Intermediate Similarity NPC329480
0.829 Intermediate Similarity NPC323858
0.7562 Intermediate Similarity NPC172355
0.7374 Intermediate Similarity NPC191489
0.7338 Intermediate Similarity NPC129897
0.7321 Intermediate Similarity NPC326363
0.7309 Intermediate Similarity NPC181081
0.7295 Intermediate Similarity NPC132385
0.7279 Intermediate Similarity NPC478009
0.7279 Intermediate Similarity NPC478010
0.7276 Intermediate Similarity NPC478006
0.7273 Intermediate Similarity NPC24370
0.7273 Intermediate Similarity NPC319232
0.727 Intermediate Similarity NPC88923
0.727 Intermediate Similarity NPC100734
0.727 Intermediate Similarity NPC315634
0.7269 Intermediate Similarity NPC210296
0.7239 Intermediate Similarity NPC323752
0.7239 Intermediate Similarity NPC323198
0.7216 Intermediate Similarity NPC15406
0.7212 Intermediate Similarity NPC325976
0.7184 Intermediate Similarity NPC77878
0.7153 Intermediate Similarity NPC216369
0.7127 Intermediate Similarity NPC24019
0.7123 Intermediate Similarity NPC315467
0.7122 Intermediate Similarity NPC183537
0.7122 Intermediate Similarity NPC108342
0.7096 Intermediate Similarity NPC189903
0.7096 Intermediate Similarity NPC182907
0.7092 Intermediate Similarity NPC284685
0.7071 Intermediate Similarity NPC314882
0.707 Intermediate Similarity NPC82472
0.7059 Intermediate Similarity NPC272549
0.705 Intermediate Similarity NPC266931
0.7021 Intermediate Similarity NPC472589
0.7021 Intermediate Similarity NPC318068
0.7018 Intermediate Similarity NPC148889
0.7018 Intermediate Similarity NPC217554
0.7011 Intermediate Similarity NPC472588
0.7007 Intermediate Similarity NPC89549
0.7007 Intermediate Similarity NPC166722
0.7004 Intermediate Similarity NPC284141
0.7004 Intermediate Similarity NPC78609
0.7004 Intermediate Similarity NPC208522
0.699 Remote Similarity NPC473639
0.6985 Remote Similarity NPC22481
0.6984 Remote Similarity NPC315499
0.6976 Remote Similarity NPC478011
0.6976 Remote Similarity NPC478012
0.6975 Remote Similarity NPC153400
0.6971 Remote Similarity NPC15801
0.6969 Remote Similarity NPC314056
0.6966 Remote Similarity NPC210434
0.696 Remote Similarity NPC90875
0.696 Remote Similarity NPC253675
0.696 Remote Similarity NPC277351
0.6957 Remote Similarity NPC49672
0.6952 Remote Similarity NPC314176
0.6949 Remote Similarity NPC233334
0.6945 Remote Similarity NPC11408
0.6942 Remote Similarity NPC124313
0.6941 Remote Similarity NPC169716
0.6937 Remote Similarity NPC278525
0.6934 Remote Similarity NPC295228
0.6931 Remote Similarity NPC207283
0.6931 Remote Similarity NPC84164
0.6917 Remote Similarity NPC74360
0.6912 Remote Similarity NPC201508
0.6909 Remote Similarity NPC28945
0.6909 Remote Similarity NPC476995
0.6906 Remote Similarity NPC246658
0.6904 Remote Similarity NPC314743
0.69 Remote Similarity NPC194740
0.6897 Remote Similarity NPC478013
0.6877 Remote Similarity NPC258048
0.6868 Remote Similarity NPC270515
0.6861 Remote Similarity NPC96584
0.6861 Remote Similarity NPC255800
0.6861 Remote Similarity NPC284888
0.6856 Remote Similarity NPC236668
0.6855 Remote Similarity NPC319774
0.6848 Remote Similarity NPC473183
0.6848 Remote Similarity NPC184225
0.6836 Remote Similarity NPC316411
0.683 Remote Similarity NPC146976
0.6828 Remote Similarity NPC54066
0.6825 Remote Similarity NPC244897
0.682 Remote Similarity NPC67401
0.682 Remote Similarity NPC473188
0.6807 Remote Similarity NPC303374
0.6803 Remote Similarity NPC121069
0.6788 Remote Similarity NPC315062
0.6788 Remote Similarity NPC267853
0.6787 Remote Similarity NPC285343
0.6786 Remote Similarity NPC316224
0.6778 Remote Similarity NPC280272
0.6775 Remote Similarity NPC208898
0.6775 Remote Similarity NPC182222
0.6775 Remote Similarity NPC473184
0.6774 Remote Similarity NPC475844
0.6772 Remote Similarity NPC244543
0.6764 Remote Similarity NPC54803
0.6764 Remote Similarity NPC207686
0.6764 Remote Similarity NPC321592
0.6763 Remote Similarity NPC101350
0.6761 Remote Similarity NPC473800
0.676 Remote Similarity NPC476514
0.6755 Remote Similarity NPC316981
0.6752 Remote Similarity NPC476998
0.6752 Remote Similarity NPC223409
0.6752 Remote Similarity NPC476996
0.6751 Remote Similarity NPC477549
0.6749 Remote Similarity NPC63971
0.6749 Remote Similarity NPC91868
0.6747 Remote Similarity NPC215837
0.674 Remote Similarity NPC124920
0.674 Remote Similarity NPC34580
0.674 Remote Similarity NPC118559
0.674 Remote Similarity NPC304307
0.674 Remote Similarity NPC192712
0.6739 Remote Similarity NPC172222
0.6739 Remote Similarity NPC329631
0.6738 Remote Similarity NPC41501
0.6738 Remote Similarity NPC475816
0.6727 Remote Similarity NPC260434
0.6727 Remote Similarity NPC476999
0.6727 Remote Similarity NPC235685
0.6725 Remote Similarity NPC478083
0.6725 Remote Similarity NPC53534
0.6725 Remote Similarity NPC26543
0.6722 Remote Similarity NPC260909
0.6716 Remote Similarity NPC27041
0.6716 Remote Similarity NPC118121
0.6715 Remote Similarity NPC100547
0.6715 Remote Similarity NPC476994
0.6715 Remote Similarity NPC476997
0.6714 Remote Similarity NPC119134
0.6704 Remote Similarity NPC276657
0.6704 Remote Similarity NPC478157
0.6703 Remote Similarity NPC196718
0.6702 Remote Similarity NPC137353
0.6701 Remote Similarity NPC152620
0.6691 Remote Similarity NPC281049
0.6691 Remote Similarity NPC95240
0.6691 Remote Similarity NPC204446
0.6691 Remote Similarity NPC322135
0.669 Remote Similarity NPC478045
0.6689 Remote Similarity NPC472842
0.6688 Remote Similarity NPC207620
0.6679 Remote Similarity NPC220852
0.6679 Remote Similarity NPC261251
0.6679 Remote Similarity NPC280799
0.6679 Remote Similarity NPC124086
0.6667 Remote Similarity NPC196449
0.6667 Remote Similarity NPC314222
0.6667 Remote Similarity NPC21638
0.6667 Remote Similarity NPC14288
0.6667 Remote Similarity NPC184680
0.6667 Remote Similarity NPC165964
0.6667 Remote Similarity NPC125597
0.6655 Remote Similarity NPC39370
0.6644 Remote Similarity NPC195788
0.6644 Remote Similarity NPC237901
0.6643 Remote Similarity NPC470785
0.6643 Remote Similarity NPC49547
0.6643 Remote Similarity NPC475720
0.6643 Remote Similarity NPC131486
0.6643 Remote Similarity NPC470784
0.6643 Remote Similarity NPC473186
0.6643 Remote Similarity NPC102593
0.6643 Remote Similarity NPC474192
0.6642 Remote Similarity NPC214142
0.6642 Remote Similarity NPC323969
0.6633 Remote Similarity NPC471303
0.6631 Remote Similarity NPC473187
0.663 Remote Similarity NPC303658
0.663 Remote Similarity NPC122436
0.6629 Remote Similarity NPC193238
0.662 Remote Similarity NPC107123
0.662 Remote Similarity NPC189079
0.6618 Remote Similarity NPC60621
0.6618 Remote Similarity NPC473317
0.6618 Remote Similarity NPC157931
0.6617 Remote Similarity NPC11464
0.6607 Remote Similarity NPC240384
0.6606 Remote Similarity NPC473449
0.66 Remote Similarity NPC45048
0.6596 Remote Similarity NPC161801
0.6595 Remote Similarity NPC33064
0.6595 Remote Similarity NPC245055
0.6594 Remote Similarity NPC246381
0.6594 Remote Similarity NPC274640
0.6593 Remote Similarity NPC122463
0.6592 Remote Similarity NPC87413
0.659 Remote Similarity NPC315491
0.659 Remote Similarity NPC45459
0.6585 Remote Similarity NPC133609
0.6585 Remote Similarity NPC476515
0.6581 Remote Similarity NPC174760

  Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC116701 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.7509 Intermediate Similarity NPD8463 Approved
0.75 Intermediate Similarity NPD8279 Clinical (unspecified phase)
0.7426 Intermediate Similarity NPD8350 Clinical (unspecified phase)
0.7393 Intermediate Similarity NPD5450 Discontinued
0.739 Intermediate Similarity NPD6745 Discontinued
0.7374 Intermediate Similarity NPD7708 Approved
0.7302 Intermediate Similarity NPD8091 Phase 3
0.727 Intermediate Similarity NPD7803 Approved
0.7269 Intermediate Similarity NPD8405 Clinical (unspecified phase)
0.7249 Intermediate Similarity NPD4454 Phase 2
0.7189 Intermediate Similarity NPD6530 Approved
0.7189 Intermediate Similarity NPD6531 Approved
0.7174 Intermediate Similarity NPD7658 Phase 2
0.7148 Intermediate Similarity NPD5482 Discontinued
0.7092 Intermediate Similarity NPD7956 Approved
0.7092 Intermediate Similarity NPD7955 Approved
0.7065 Intermediate Similarity NPD7792 Phase 1
0.7065 Intermediate Similarity NPD5483 Clinical (unspecified phase)
0.7052 Intermediate Similarity NPD7994 Phase 2
0.7048 Intermediate Similarity NPD7558 Phase 2
0.7024 Intermediate Similarity NPD7689 Approved
0.7011 Intermediate Similarity NPD4885 Approved
0.7011 Intermediate Similarity NPD4926 Clinical (unspecified phase)
0.6996 Remote Similarity NPD7169 Suspended
0.6996 Remote Similarity NPD5612 Discontinued
0.6989 Remote Similarity NPD8102 Discontinued
0.6982 Remote Similarity NPD7886 Phase 2
0.6982 Remote Similarity NPD7885 Phase 2
0.6975 Remote Similarity NPD7859 Phase 2
0.6952 Remote Similarity NPD3263 Phase 3
0.6941 Remote Similarity NPD8310 Clinical (unspecified phase)
0.6935 Remote Similarity NPD7998 Clinical (unspecified phase)
0.6934 Remote Similarity NPD7853 Phase 2
0.6926 Remote Similarity NPD3259 Approved
0.6923 Remote Similarity NPD5040 Clinical (unspecified phase)
0.692 Remote Similarity NPD2921 Clinical (unspecified phase)
0.692 Remote Similarity NPD7393 Clinical (unspecified phase)
0.692 Remote Similarity NPD3243 Approved
0.6906 Remote Similarity NPD7823 Clinical (unspecified phase)
0.6904 Remote Similarity NPD6525 Clinical (unspecified phase)
0.6903 Remote Similarity NPD6824 Clinical (unspecified phase)
0.6891 Remote Similarity NPD6242 Discontinued
0.6886 Remote Similarity NPD7673 Phase 3
0.6873 Remote Similarity NPD3006 Discontinued
0.6863 Remote Similarity NPD4328 Approved
0.6854 Remote Similarity NPD3258 Approved
0.6847 Remote Similarity NPD7872 Phase 2
0.6844 Remote Similarity NPD8349 Phase 1
0.6835 Remote Similarity NPD7417 Discontinued
0.6827 Remote Similarity NPD7426 Phase 1
0.6827 Remote Similarity NPD7603 Discontinued
0.6823 Remote Similarity NPD6727 Phase 2
0.682 Remote Similarity NPD6503 Clinical (unspecified phase)
0.6818 Remote Similarity NPD8093 Discontinued
0.6816 Remote Similarity NPD5632 Approved
0.6814 Remote Similarity NPD3217 Phase 2
0.6813 Remote Similarity NPD5801 Clinical (unspecified phase)
0.681 Remote Similarity NPD6716 Phase 1
0.6806 Remote Similarity NPD7862 Clinical (unspecified phase)
0.6801 Remote Similarity NPD4845 Discontinued
0.68 Remote Similarity NPD6494 Phase 2
0.68 Remote Similarity NPD4373 Phase 2
0.6787 Remote Similarity NPD8524 Approved
0.6774 Remote Similarity NPD7576 Discontinued
0.6754 Remote Similarity NPD7395 Discontinued
0.6753 Remote Similarity NPD7548 Discontinued
0.6753 Remote Similarity NPD7547 Clinical (unspecified phase)
0.6752 Remote Similarity NPD7589 Clinical (unspecified phase)
0.6743 Remote Similarity NPD7690 Clinical (unspecified phase)
0.6742 Remote Similarity NPD8149 Discontinued
0.674 Remote Similarity NPD7268 Clinical (unspecified phase)
0.6739 Remote Similarity NPD6741 Clinical (unspecified phase)
0.6727 Remote Similarity NPD1467 Approved
0.6727 Remote Similarity NPD1466 Phase 3
0.6727 Remote Similarity NPD1867 Approved
0.6722 Remote Similarity NPD8459 Approved
0.6722 Remote Similarity NPD8460 Approved
0.6715 Remote Similarity NPD6964 Approved
0.6715 Remote Similarity NPD6963 Approved
0.6704 Remote Similarity NPD3257 Approved
0.6704 Remote Similarity NPD5902 Approved
0.6704 Remote Similarity NPD5903 Approved
0.6691 Remote Similarity NPD4952 Phase 3
0.669 Remote Similarity NPD4558 Phase 2
0.669 Remote Similarity NPD4876 Phase 3
0.669 Remote Similarity NPD4875 Phase 3
0.6679 Remote Similarity NPD7025 Clinical (unspecified phase)
0.6678 Remote Similarity NPD8046 Discontinued
0.6667 Remote Similarity NPD7948 Phase 1
0.6667 Remote Similarity NPD4958 Clinical (unspecified phase)
0.6667 Remote Similarity NPD1322 Clinical (unspecified phase)
0.6655 Remote Similarity NPD6790 Phase 1
0.6655 Remote Similarity NPD5559 Phase 2
0.6654 Remote Similarity NPD7470 Discontinued
0.6644 Remote Similarity NPD8465 Approved
0.6644 Remote Similarity NPD8428 Approved
0.6644 Remote Similarity NPD8429 Approved
0.6644 Remote Similarity NPD8467 Approved
0.6644 Remote Similarity NPD8466 Approved
0.6644 Remote Similarity NPD8427 Approved
0.6633 Remote Similarity NPD6983 Approved
0.6631 Remote Similarity NPD6517 Phase 3
0.6621 Remote Similarity NPD8284 Discontinued
0.6617 Remote Similarity NPD6803 Clinical (unspecified phase)
0.661 Remote Similarity NPD8364 Approved
0.661 Remote Similarity NPD8363 Approved
0.6609 Remote Similarity NPD8244 Phase 2
0.6604 Remote Similarity NPD8094 Discontinued
0.6604 Remote Similarity NPD7947 Clinical (unspecified phase)
0.6599 Remote Similarity NPD6773 Clinical (unspecified phase)
0.6599 Remote Similarity NPD1224 Phase 2
0.6599 Remote Similarity NPD1225 Phase 2
0.6596 Remote Similarity NPD7868 Clinical (unspecified phase)
0.6595 Remote Similarity NPD2951 Discontinued
0.6593 Remote Similarity NPD4989 Phase 2
0.659 Remote Similarity NPD484 Approved
0.6585 Remote Similarity NPD4350 Approved
0.6585 Remote Similarity NPD4349 Approved
0.6584 Remote Similarity NPD7729 Clinical (unspecified phase)
0.6582 Remote Similarity NPD8289 Discontinued
0.6582 Remote Similarity NPD5640 Discontinued
0.6581 Remote Similarity NPD7180 Phase 3
0.6575 Remote Similarity NPD7706 Clinical (unspecified phase)
0.6572 Remote Similarity NPD1483 Discontinued
0.6571 Remote Similarity NPD5469 Phase 3
0.657 Remote Similarity NPD5022 Discontinued
0.6568 Remote Similarity NPD6568 Discontinued
0.6567 Remote Similarity NPD5866 Approved
0.6567 Remote Similarity NPD7069 Discontinued
0.6566 Remote Similarity NPD8365 Clinical (unspecified phase)
0.6556 Remote Similarity NPD8426 Approved
0.6556 Remote Similarity NPD8425 Approved
0.6553 Remote Similarity NPD5901 Discontinued
0.6547 Remote Similarity NPD6962 Phase 2
0.6547 Remote Similarity NPD7166 Approved
0.6547 Remote Similarity NPD7165 Approved
0.6544 Remote Similarity NPD6974 Phase 3
0.6534 Remote Similarity NPD7710 Clinical (unspecified phase)
0.6533 Remote Similarity NPD6160 Clinical (unspecified phase)
0.6525 Remote Similarity NPD4314 Approved
0.6525 Remote Similarity NPD4313 Approved
0.6522 Remote Similarity NPD7655 Discontinued
0.652 Remote Similarity NPD7924 Phase 2
0.652 Remote Similarity NPD7925 Phase 2
0.6516 Remote Similarity NPD1936 Clinical (unspecified phase)
0.6504 Remote Similarity NPD1392 Approved
0.6504 Remote Similarity NPD7222 Phase 2
0.6502 Remote Similarity NPD7766 Phase 2
0.6496 Remote Similarity NPD4923 Phase 1
0.649 Remote Similarity NPD7181 Phase 3
0.6486 Remote Similarity NPD8421 Discontinued
0.6484 Remote Similarity NPD7194 Discontinued
0.6483 Remote Similarity NPD7405 Clinical (unspecified phase)
0.6479 Remote Similarity NPD5658 Approved
0.6473 Remote Similarity NPD8356 Approved
0.6468 Remote Similarity NPD5066 Phase 2
0.6468 Remote Similarity NPD5067 Phase 2
0.6466 Remote Similarity NPD3003 Approved
0.6464 Remote Similarity NPD7796 Approved
0.6464 Remote Similarity NPD7797 Approved
0.646 Remote Similarity NPD8442 Discontinued
0.6458 Remote Similarity NPD7538 Clinical (unspecified phase)
0.6458 Remote Similarity NPD5417 Clinical (unspecified phase)
0.6452 Remote Similarity NPD5479 Discontinued
0.6446 Remote Similarity NPD8398 Clinical (unspecified phase)
0.6444 Remote Similarity NPD8016 Phase 3
0.6444 Remote Similarity NPD4309 Approved
0.6444 Remote Similarity NPD8017 Clinical (unspecified phase)
0.6442 Remote Similarity NPD6838 Clinical (unspecified phase)
0.6442 Remote Similarity NPD7452 Approved
0.6442 Remote Similarity NPD7453 Approved
0.6441 Remote Similarity NPD8024 Phase 2
0.6441 Remote Similarity NPD8023 Phase 2
0.6439 Remote Similarity NPD8430 Approved
0.6436 Remote Similarity NPD8101 Phase 3
0.6431 Remote Similarity NPD5805 Approved
0.6429 Remote Similarity NPD8238 Clinical (unspecified phase)
0.6426 Remote Similarity NPD2783 Phase 2
0.6424 Remote Similarity NPD8358 Approved
0.6423 Remote Similarity NPD3763 Approved
0.6419 Remote Similarity NPD6456 Discontinued
0.6418 Remote Similarity NPD7807 Clinical (unspecified phase)
0.6418 Remote Similarity NPD6376 Discontinued
0.6417 Remote Similarity NPD8525 Approved
0.6412 Remote Similarity NPD6709 Phase 3
0.641 Remote Similarity NPD8406 Clinical (unspecified phase)
0.6407 Remote Similarity NPD5416 Discontinued
0.6407 Remote Similarity NPD7927 Clinical (unspecified phase)
0.6404 Remote Similarity NPD4862 Clinical (unspecified phase)
0.6404 Remote Similarity NPD7957 Phase 1
0.6404 Remote Similarity NPD7958 Clinical (unspecified phase)
0.6404 Remote Similarity NPD8246 Approved
0.6404 Remote Similarity NPD8247 Approved
0.64 Remote Similarity NPD8479 Phase 2
0.6397 Remote Similarity NPD3757 Clinical (unspecified phase)
0.6389 Remote Similarity NPD5488 Discontinued
0.6389 Remote Similarity NPD6460 Clinical (unspecified phase)
0.6382 Remote Similarity NPD8255 Phase 2
0.6382 Remote Similarity NPD6961 Discontinued
0.6379 Remote Similarity NPD7588 Discontinued

  Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data