Structure

Physi-Chem Properties

Molecular Weight:  984.59
Volume:  1015.426
LogP:  3.004
LogD:  2.49
LogS:  -3.371
# Rotatable Bonds:  9
TPSA:  262.52
# H-Bond Aceptor:  20
# H-Bond Donor:  5
# Rings:  2
# Heavy Atoms:  20

MedChem Properties

QED Drug-Likeness Score:  0.177
Synthetic Accessibility Score:  6.52
Fsp3:  0.68
Lipinski Rule-of-5:  Rejected
Pfizer Rule:  Accepted
GSK Rule:  Rejected
BMS Rule:  0
Golden Triangle Rule:  Rejected
Chelating Alert:  0
PAINS Alert:  0

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

Caco-2 Permeability:  -5.825
MDCK Permeability:  1.5834904843359254e-05
Pgp-inhibitor:  1.0
Pgp-substrate:  0.994
Human Intestinal Absorption (HIA):  0.838
20% Bioavailability (F20%):  0.247
30% Bioavailability (F30%):  0.935

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):  0.092
Plasma Protein Binding (PPB):  75.74906158447266%
Volume Distribution (VD):  0.524
Pgp-substrate:  36.69618225097656%

ADMET: Metabolism

CYP1A2-inhibitor:  0.0
CYP1A2-substrate:  0.017
CYP2C19-inhibitor:  0.027
CYP2C19-substrate:  0.093
CYP2C9-inhibitor:  0.04
CYP2C9-substrate:  0.014
CYP2D6-inhibitor:  0.002
CYP2D6-substrate:  0.07
CYP3A4-inhibitor:  0.721
CYP3A4-substrate:  0.16

ADMET: Excretion

Clearance (CL):  6.989
Half-life (T1/2):  0.12

ADMET: Toxicity

hERG Blockers:  0.003
Human Hepatotoxicity (H-HT):  0.99
Drug-inuced Liver Injury (DILI):  0.93
AMES Toxicity:  0.006
Rat Oral Acute Toxicity:  0.077
Maximum Recommended Daily Dose:  0.02
Skin Sensitization:  0.064
Carcinogencity:  0.037
Eye Corrosion:  0.003
Eye Irritation:  0.003
Respiratory Toxicity:  0.721

Download Data

Data Type Select
General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs  

  Natural Product: NPC473693

Natural Product ID:  NPC473693
Common Name*:   Majusculamide
IUPAC Name:   (2S,8S,14S,17S,20S,25S,28R,29S)-2,8-bis[(2S)-butan-2-yl]-28-ethyl-17-[(4-methoxyphenyl)methyl]-7,13,16,20,22,22,25,29-octamethyl-14-propan-2-yl-1-oxa-4,7,10,13,16,19,24,27-octazacyclotriacontane-3,6,9,12,15,18,21,23,26,30-decone
Synonyms:   Majusculamide
Standard InCHIKey:  KDZUJZSBNBCYEK-URQIXXPJSA-N
Standard InCHI:  InChI=1S/C50H80N8O12/c1-17-28(6)40-45(64)51-25-37(59)57(14)39(27(4)5)47(66)56(13)36(24-33-20-22-34(69-16)23-21-33)44(63)53-31(9)42(61)50(11,12)49(68)54-32(10)43(62)55-35(19-3)30(8)48(67)70-41(29(7)18-2)46(65)52-26-38(60)58(40)15/h20-23,27-32,35-36,39-41H,17-19,24-26H2,1-16H3,(H,51,64)(H,52,65)(H,53,63)(H,54,68)(H,55,62)/t28-,29-,30-,31-,32-,35+,36-,39-,40-,41-/m0/s1
SMILES:  CC[C@@H]([C@H]1C(=NCC(=O)N(C)[C@@H](C(C)C)C(=O)N(C)[C@@H](Cc2ccc(cc2)OC)C(=N[C@@H](C)C(=O)C(C)(C)C(=N[C@H](C(=N[C@@H]([C@@H](C(=O)O[C@H](C(=NCC(=O)N1C)O)[C@H](CC)C)C)CC)O)C)O)O)O)C
Synthetic Gene Cluster:   n.a.
ChEMBL Identifier:   CHEMBL449331
PubChem CID:   44584099
Chemical Classification**:  
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0000264] Organic acids and derivatives
      • [CHEMONTID:0001813] Peptidomimetics
        • [CHEMONTID:0001961] Depsipeptides
          • [CHEMONTID:0001994] Cyclic depsipeptides

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[10514329]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[10654420]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[10691708]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. palauan n.a. PMID[10691729]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[10843570]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[10924172]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[10978206]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[11076571]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[11076573]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[11076574]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[11277744]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[11389621]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[11430000]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[11473443]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[11922791]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[12762816]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. Papua New Guinea n.a. PMID[12828459]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[14575437]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[1517734]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. Papua New Guinea n.a. PMID[16643028]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[17125217]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[17441769]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[18444683]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. Singapore n.a. PMID[19093843]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[19489598]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. eastern Caribbean n.a. PMID[19739598]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[19839606]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[20030365]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. panamanian n.a. PMID[20158242]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. Floridian n.a. PMID[20166701]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[20936843]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[21138309]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[2128518]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[21341718]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[21539315]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[21806011]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[21999614]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[22035372]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[29792428]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[3924698]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. Caribbean n.a. PMID[7623050]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. Caribbean n.a. PMID[8699186]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[9584405]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[9599278]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[9599279]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. PMID[9784156]
NPO28999 Schizothrix calcicola Species Schizotrichaceae Bacteria n.a. n.a. n.a. PMID[9784156]
NPO26389 Lyngbya majuscula Species Oscillatoriaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO28999 Schizothrix calcicola Species Schizotrichaceae Bacteria n.a. n.a. n.a. Database[UNPD]

☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  NP Quantity Composition/Concentration

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference

☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT137 Cell Line L1210 Mus musculus Activity = 500.0 Zone units PMID[515791]
NPT730 Cell Line MC-38 Mus musculus Activity = 730.0 Zone units PMID[515791]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Activity = 710.0 Zone units PMID[515791]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Activity = 450.0 Zone units PMID[515791]

☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

  Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC473693 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC471568
0.9677 High Similarity NPC186617
0.9006 High Similarity NPC196091
0.8642 High Similarity NPC472923
0.8571 High Similarity NPC475421
0.8562 High Similarity NPC176226
0.8537 High Similarity NPC473502
0.8421 Intermediate Similarity NPC470112
0.8421 Intermediate Similarity NPC470903
0.8421 Intermediate Similarity NPC167763
0.8324 Intermediate Similarity NPC299806
0.8312 Intermediate Similarity NPC476259
0.8302 Intermediate Similarity NPC324081
0.8258 Intermediate Similarity NPC168113
0.8218 Intermediate Similarity NPC315542
0.8205 Intermediate Similarity NPC197682
0.8192 Intermediate Similarity NPC473378
0.8192 Intermediate Similarity NPC473407
0.8176 Intermediate Similarity NPC26108
0.8129 Intermediate Similarity NPC50016
0.8118 Intermediate Similarity NPC248670
0.807 Intermediate Similarity NPC471165
0.807 Intermediate Similarity NPC473354
0.8061 Intermediate Similarity NPC319320
0.8061 Intermediate Similarity NPC287757
0.805 Intermediate Similarity NPC81026
0.8036 Intermediate Similarity NPC254700
0.8023 Intermediate Similarity NPC4910
0.8012 Intermediate Similarity NPC273755
0.8012 Intermediate Similarity NPC132771
0.8 Intermediate Similarity NPC40234
0.8 Intermediate Similarity NPC475123
0.8 Intermediate Similarity NPC475204
0.7987 Intermediate Similarity NPC266741
0.7966 Intermediate Similarity NPC276120
0.7949 Intermediate Similarity NPC6570
0.7931 Intermediate Similarity NPC45037
0.7927 Intermediate Similarity NPC39431
0.7895 Intermediate Similarity NPC46009
0.7892 Intermediate Similarity NPC56635
0.7889 Intermediate Similarity NPC248822
0.7889 Intermediate Similarity NPC477526
0.7882 Intermediate Similarity NPC209463
0.7882 Intermediate Similarity NPC294516
0.7882 Intermediate Similarity NPC107938
0.787 Intermediate Similarity NPC63931
0.7861 Intermediate Similarity NPC476227
0.7861 Intermediate Similarity NPC164608
0.7849 Intermediate Similarity NPC230611
0.7841 Intermediate Similarity NPC476321
0.7834 Intermediate Similarity NPC127741
0.7833 Intermediate Similarity NPC174122
0.7833 Intermediate Similarity NPC64140
0.7826 Intermediate Similarity NPC323662
0.7826 Intermediate Similarity NPC477550
0.7826 Intermediate Similarity NPC477552
0.7821 Intermediate Similarity NPC329731
0.7803 Intermediate Similarity NPC137627
0.7803 Intermediate Similarity NPC306804
0.7797 Intermediate Similarity NPC471526
0.7784 Intermediate Similarity NPC212699
0.7784 Intermediate Similarity NPC207675
0.7784 Intermediate Similarity NPC32064
0.7778 Intermediate Similarity NPC135121
0.7778 Intermediate Similarity NPC234069
0.7771 Intermediate Similarity NPC244509
0.7764 Intermediate Similarity NPC201244
0.7764 Intermediate Similarity NPC477217
0.776 Intermediate Similarity NPC59827
0.776 Intermediate Similarity NPC184933
0.7759 Intermediate Similarity NPC158277
0.7759 Intermediate Similarity NPC279871
0.7759 Intermediate Similarity NPC473402
0.7753 Intermediate Similarity NPC294951
0.7753 Intermediate Similarity NPC471049
0.7753 Intermediate Similarity NPC471050
0.7753 Intermediate Similarity NPC471048
0.7746 Intermediate Similarity NPC89831
0.7744 Intermediate Similarity NPC473491
0.7742 Intermediate Similarity NPC477551
0.772 Intermediate Similarity NPC326027
0.7709 Intermediate Similarity NPC138083
0.7708 Intermediate Similarity NPC326333
0.7705 Intermediate Similarity NPC65714
0.7705 Intermediate Similarity NPC328763
0.7688 Intermediate Similarity NPC123859
0.7657 Intermediate Similarity NPC155506
0.7657 Intermediate Similarity NPC159767
0.7651 Intermediate Similarity NPC56685
0.7651 Intermediate Similarity NPC262166
0.7644 Intermediate Similarity NPC328494
0.7643 Intermediate Similarity NPC470392
0.7634 Intermediate Similarity NPC477527
0.7633 Intermediate Similarity NPC244336
0.7627 Intermediate Similarity NPC269750
0.7627 Intermediate Similarity NPC194671
0.7622 Intermediate Similarity NPC473371
0.7616 Intermediate Similarity NPC61004
0.761 Intermediate Similarity NPC68865
0.7592 Intermediate Similarity NPC194699
0.7592 Intermediate Similarity NPC219350
0.7582 Intermediate Similarity NPC102959
0.7581 Intermediate Similarity NPC471592
0.7561 Intermediate Similarity NPC145113
0.756 Intermediate Similarity NPC473580
0.756 Intermediate Similarity NPC476268
0.7553 Intermediate Similarity NPC473450
0.7545 Intermediate Similarity NPC261934
0.7545 Intermediate Similarity NPC5194
0.7542 Intermediate Similarity NPC473404
0.7541 Intermediate Similarity NPC473305
0.7541 Intermediate Similarity NPC60516
0.7541 Intermediate Similarity NPC163961
0.7531 Intermediate Similarity NPC91953
0.7527 Intermediate Similarity NPC149962
0.7516 Intermediate Similarity NPC46098
0.7516 Intermediate Similarity NPC268841
0.7516 Intermediate Similarity NPC307357
0.7487 Intermediate Similarity NPC144314
0.7485 Intermediate Similarity NPC469243
0.7485 Intermediate Similarity NPC162104
0.7485 Intermediate Similarity NPC233702
0.7469 Intermediate Similarity NPC197921
0.7468 Intermediate Similarity NPC246079
0.746 Intermediate Similarity NPC242728
0.7455 Intermediate Similarity NPC16188
0.7447 Intermediate Similarity NPC50548
0.7446 Intermediate Similarity NPC29531
0.7446 Intermediate Similarity NPC240130
0.7446 Intermediate Similarity NPC61332
0.744 Intermediate Similarity NPC202198
0.7436 Intermediate Similarity NPC277306
0.7436 Intermediate Similarity NPC319766
0.7436 Intermediate Similarity NPC469442
0.7432 Intermediate Similarity NPC94862
0.7429 Intermediate Similarity NPC469505
0.7423 Intermediate Similarity NPC212850
0.7423 Intermediate Similarity NPC469360
0.7423 Intermediate Similarity NPC83289
0.7423 Intermediate Similarity NPC189724
0.7419 Intermediate Similarity NPC302715
0.741 Intermediate Similarity NPC9373
0.7384 Intermediate Similarity NPC475544
0.7382 Intermediate Similarity NPC311357
0.7371 Intermediate Similarity NPC302597
0.7362 Intermediate Similarity NPC476989
0.7362 Intermediate Similarity NPC469427
0.7362 Intermediate Similarity NPC469426
0.736 Intermediate Similarity NPC136797
0.736 Intermediate Similarity NPC25539
0.7356 Intermediate Similarity NPC223207
0.7355 Intermediate Similarity NPC476241
0.7355 Intermediate Similarity NPC476260
0.7349 Intermediate Similarity NPC247298
0.7333 Intermediate Similarity NPC313867
0.7333 Intermediate Similarity NPC316008
0.7317 Intermediate Similarity NPC139326
0.7314 Intermediate Similarity NPC471771
0.7314 Intermediate Similarity NPC304074
0.7314 Intermediate Similarity NPC290755
0.7314 Intermediate Similarity NPC469479
0.7312 Intermediate Similarity NPC274732
0.7308 Intermediate Similarity NPC476179
0.7308 Intermediate Similarity NPC476125
0.7301 Intermediate Similarity NPC239762
0.7301 Intermediate Similarity NPC163392
0.7289 Intermediate Similarity NPC314358
0.7288 Intermediate Similarity NPC274198
0.7288 Intermediate Similarity NPC151030
0.7288 Intermediate Similarity NPC269383
0.7288 Intermediate Similarity NPC198254
0.7287 Intermediate Similarity NPC471563
0.7284 Intermediate Similarity NPC471264
0.7284 Intermediate Similarity NPC471265
0.7273 Intermediate Similarity NPC315283
0.7273 Intermediate Similarity NPC204546
0.7273 Intermediate Similarity NPC314388
0.7267 Intermediate Similarity NPC197743
0.7267 Intermediate Similarity NPC326349
0.7267 Intermediate Similarity NPC323336
0.7267 Intermediate Similarity NPC297145
0.7262 Intermediate Similarity NPC245974
0.7262 Intermediate Similarity NPC2501
0.7256 Intermediate Similarity NPC263493
0.7256 Intermediate Similarity NPC269398
0.7241 Intermediate Similarity NPC241794
0.7232 Intermediate Similarity NPC129486
0.7229 Intermediate Similarity NPC5620
0.7212 Intermediate Similarity NPC161069
0.7208 Intermediate Similarity NPC476183
0.7205 Intermediate Similarity NPC307123
0.7205 Intermediate Similarity NPC97870
0.7205 Intermediate Similarity NPC247018
0.7191 Intermediate Similarity NPC276506
0.7188 Intermediate Similarity NPC469443
0.7175 Intermediate Similarity NPC328649
0.7169 Intermediate Similarity NPC52748
0.7161 Intermediate Similarity NPC476184
0.7161 Intermediate Similarity NPC476281
0.7158 Intermediate Similarity NPC477637

  Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC473693 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8107 Intermediate Similarity NPD7608 Discontinued
0.7871 Intermediate Similarity NPD5745 Approved
0.7866 Intermediate Similarity NPD7131 Phase 3
0.7742 Intermediate Similarity NPD5746 Approved
0.7733 Intermediate Similarity NPD7484 Phase 3
0.7733 Intermediate Similarity NPD7485 Phase 3
0.7692 Intermediate Similarity NPD7972 Discontinued
0.7514 Intermediate Similarity NPD8303 Discontinued
0.7471 Intermediate Similarity NPD7118 Clinical (unspecified phase)
0.7427 Intermediate Similarity NPD3007 Approved
0.7427 Intermediate Similarity NPD2515 Approved
0.7425 Intermediate Similarity NPD5348 Clinical (unspecified phase)
0.7423 Intermediate Similarity NPD7978 Discontinued
0.7421 Intermediate Similarity NPD5729 Clinical (unspecified phase)
0.7407 Intermediate Similarity NPD7811 Phase 3
0.7407 Intermediate Similarity NPD7810 Phase 3
0.7381 Intermediate Similarity NPD6390 Discontinued
0.7368 Intermediate Similarity NPD2513 Approved
0.7362 Intermediate Similarity NPD2240 Approved
0.7362 Intermediate Similarity NPD2239 Approved
0.7337 Intermediate Similarity NPD6089 Clinical (unspecified phase)
0.731 Intermediate Similarity NPD2053 Approved
0.731 Intermediate Similarity NPD22 Approved
0.7308 Intermediate Similarity NPD7132 Clinical (unspecified phase)
0.7278 Intermediate Similarity NPD4186 Clinical (unspecified phase)
0.7273 Intermediate Similarity NPD6681 Discovery
0.7273 Intermediate Similarity NPD7596 Clinical (unspecified phase)
0.7257 Intermediate Similarity NPD8031 Discontinued
0.7251 Intermediate Similarity NPD2052 Approved
0.7238 Intermediate Similarity NPD5485 Approved
0.7238 Intermediate Similarity NPD5484 Approved
0.7228 Intermediate Similarity NPD6851 Approved
0.7228 Intermediate Similarity NPD6853 Approved
0.7212 Intermediate Similarity NPD3656 Approved
0.7205 Intermediate Similarity NPD1423 Approved
0.7174 Intermediate Similarity NPD7280 Phase 3
0.7174 Intermediate Similarity NPD7281 Phase 3
0.7168 Intermediate Similarity NPD6677 Suspended
0.7158 Intermediate Similarity NPD8014 Clinical (unspecified phase)
0.7134 Intermediate Similarity NPD3676 Clinical (unspecified phase)
0.7104 Intermediate Similarity NPD6297 Approved
0.7104 Intermediate Similarity NPD7959 Clinical (unspecified phase)
0.7088 Intermediate Similarity NPD5312 Approved
0.7088 Intermediate Similarity NPD5313 Approved
0.7086 Intermediate Similarity NPD5773 Approved
0.7086 Intermediate Similarity NPD5772 Approved
0.7081 Intermediate Similarity NPD3136 Phase 2
0.7073 Intermediate Similarity NPD8172 Phase 2
0.7073 Intermediate Similarity NPD8173 Phase 2
0.7069 Intermediate Similarity NPD6072 Discontinued
0.7062 Intermediate Similarity NPD8070 Approved
0.7047 Intermediate Similarity NPD7565 Approved
0.7045 Intermediate Similarity NPD7318 Phase 3
0.7037 Intermediate Similarity NPD6504 Approved
0.7037 Intermediate Similarity NPD3374 Clinical (unspecified phase)
0.7037 Intermediate Similarity NPD6505 Approved
0.7024 Intermediate Similarity NPD6860 Clinical (unspecified phase)
0.7018 Intermediate Similarity NPD3536 Discontinued
0.7018 Intermediate Similarity NPD6419 Discontinued
0.7 Intermediate Similarity NPD5295 Discontinued
0.6983 Remote Similarity NPD2042 Clinical (unspecified phase)
0.6983 Remote Similarity NPD2904 Discontinued
0.6983 Remote Similarity NPD2041 Clinical (unspecified phase)
0.6964 Remote Similarity NPD3655 Clinical (unspecified phase)
0.6959 Remote Similarity NPD6682 Clinical (unspecified phase)
0.6951 Remote Similarity NPD8416 Discontinued
0.6949 Remote Similarity NPD2097 Approved
0.6946 Remote Similarity NPD3175 Clinical (unspecified phase)
0.6946 Remote Similarity NPD1725 Approved
0.6944 Remote Similarity NPD2516 Approved
0.6936 Remote Similarity NPD7523 Phase 3
0.6932 Remote Similarity NPD5355 Approved
0.6932 Remote Similarity NPD7317 Phase 3
0.6932 Remote Similarity NPD5356 Approved
0.6932 Remote Similarity NPD7945 Clinical (unspecified phase)
0.6923 Remote Similarity NPD2976 Clinical (unspecified phase)
0.6906 Remote Similarity NPD4652 Approved
0.6906 Remote Similarity NPD2517 Approved
0.6906 Remote Similarity NPD7315 Approved
0.6905 Remote Similarity NPD5865 Clinical (unspecified phase)
0.6882 Remote Similarity NPD5481 Discontinued
0.6879 Remote Similarity NPD7526 Approved
0.6879 Remote Similarity NPD7527 Clinical (unspecified phase)
0.6879 Remote Similarity NPD52 Approved
0.6879 Remote Similarity NPD7613 Discontinued
0.6878 Remote Similarity NPD4434 Approved
0.6872 Remote Similarity NPD2098 Approved
0.6871 Remote Similarity NPD3166 Approved
0.6871 Remote Similarity NPD3164 Approved
0.6871 Remote Similarity NPD3165 Approved
0.6871 Remote Similarity NPD3167 Approved
0.6854 Remote Similarity NPD7080 Clinical (unspecified phase)
0.6845 Remote Similarity NPD6032 Approved
0.6842 Remote Similarity NPD4435 Approved
0.6839 Remote Similarity NPD5291 Approved
0.6839 Remote Similarity NPD1670 Discontinued
0.6839 Remote Similarity NPD5292 Approved
0.6837 Remote Similarity NPD6519 Phase 2
0.6832 Remote Similarity NPD1817 Approved
0.6832 Remote Similarity NPD1820 Approved
0.6832 Remote Similarity NPD1818 Approved
0.6832 Remote Similarity NPD1819 Approved
0.6825 Remote Similarity NPD3153 Approved
0.6825 Remote Similarity NPD3154 Approved
0.6821 Remote Similarity NPD3985 Discontinued
0.6821 Remote Similarity NPD4739 Approved
0.6807 Remote Similarity NPD7113 Clinical (unspecified phase)
0.6802 Remote Similarity NPD5756 Phase 2
0.6798 Remote Similarity NPD6668 Clinical (unspecified phase)
0.6788 Remote Similarity NPD2245 Discovery
0.6782 Remote Similarity NPD7303 Discontinued
0.6772 Remote Similarity NPD5946 Clinical (unspecified phase)
0.677 Remote Similarity NPD196 Phase 1
0.6768 Remote Similarity NPD3180 Approved
0.6768 Remote Similarity NPD5163 Phase 2
0.6768 Remote Similarity NPD3179 Approved
0.6768 Remote Similarity NPD6919 Clinical (unspecified phase)
0.6766 Remote Similarity NPD4579 Clinical (unspecified phase)
0.676 Remote Similarity NPD5967 Approved
0.6758 Remote Similarity NPD6107 Approved
0.675 Remote Similarity NPD7607 Clinical (unspecified phase)
0.6747 Remote Similarity NPD6346 Approved
0.6744 Remote Similarity NPD2219 Phase 1
0.6742 Remote Similarity NPD8019 Approved
0.6742 Remote Similarity NPD7495 Discontinued
0.674 Remote Similarity NPD8245 Clinical (unspecified phase)
0.6725 Remote Similarity NPD4237 Approved
0.6725 Remote Similarity NPD4236 Phase 3
0.6724 Remote Similarity NPD3146 Approved
0.6724 Remote Similarity NPD3688 Clinical (unspecified phase)
0.6718 Remote Similarity NPD7667 Clinical (unspecified phase)
0.6707 Remote Similarity NPD8643 Discontinued
0.6706 Remote Similarity NPD8076 Discontinued
0.6705 Remote Similarity NPD3686 Approved
0.6705 Remote Similarity NPD6666 Approved
0.6705 Remote Similarity NPD4210 Discontinued
0.6705 Remote Similarity NPD3687 Approved
0.6705 Remote Similarity NPD6667 Approved
0.6704 Remote Similarity NPD3465 Clinical (unspecified phase)
0.6702 Remote Similarity NPD5192 Clinical (unspecified phase)
0.6686 Remote Similarity NPD1975 Clinical (unspecified phase)
0.6685 Remote Similarity NPD6385 Approved
0.6685 Remote Similarity NPD6386 Approved
0.6685 Remote Similarity NPD2541 Clinical (unspecified phase)
0.6685 Remote Similarity NPD2388 Discontinued
0.6684 Remote Similarity NPD5525 Clinical (unspecified phase)
0.6684 Remote Similarity NPD5441 Clinical (unspecified phase)
0.6683 Remote Similarity NPD6863 Phase 2
0.6667 Remote Similarity NPD2888 Approved
0.6667 Remote Similarity NPD2667 Approved
0.6667 Remote Similarity NPD2017 Approved
0.6667 Remote Similarity NPD7153 Discontinued
0.6667 Remote Similarity NPD3125 Approved
0.6667 Remote Similarity NPD4413 Clinical (unspecified phase)
0.6667 Remote Similarity NPD2889 Approved
0.6667 Remote Similarity NPD2668 Approved
0.6667 Remote Similarity NPD2890 Approved
0.6648 Remote Similarity NPD6862 Phase 2
0.6648 Remote Similarity NPD6315 Phase 2
0.6648 Remote Similarity NPD4018 Clinical (unspecified phase)
0.6647 Remote Similarity NPD3692 Discontinued
0.6647 Remote Similarity NPD2161 Phase 2
0.6647 Remote Similarity NPD7450 Phase 2
0.6629 Remote Similarity NPD8417 Discontinued
0.6629 Remote Similarity NPD8389 Clinical (unspecified phase)
0.6628 Remote Similarity NPD2460 Phase 3
0.6628 Remote Similarity NPD2459 Approved
0.6628 Remote Similarity NPD2458 Approved
0.6627 Remote Similarity NPD1048 Approved
0.6626 Remote Similarity NPD1794 Approved
0.6611 Remote Similarity NPD5563 Clinical (unspecified phase)
0.661 Remote Similarity NPD4124 Clinical (unspecified phase)
0.6608 Remote Similarity NPD4152 Approved
0.6605 Remote Similarity NPD1421 Approved
0.6605 Remote Similarity NPD3685 Discontinued
0.6605 Remote Similarity NPD1420 Approved
0.66 Remote Similarity NPD8162 Phase 2
0.66 Remote Similarity NPD8163 Clinical (unspecified phase)
0.6597 Remote Similarity NPD6556 Clinical (unspecified phase)
0.6596 Remote Similarity NPD5557 Phase 1
0.6595 Remote Similarity NPD5137 Approved
0.6593 Remote Similarity NPD7975 Clinical (unspecified phase)
0.6592 Remote Similarity NPD6873 Phase 2
0.659 Remote Similarity NPD1662 Clinical (unspecified phase)
0.6588 Remote Similarity NPD6867 Clinical (unspecified phase)
0.6588 Remote Similarity NPD6866 Clinical (unspecified phase)
0.6587 Remote Similarity NPD2674 Phase 3
0.658 Remote Similarity NPD4157 Discontinued
0.6578 Remote Similarity NPD6620 Discovery
0.6575 Remote Similarity NPD6063 Approved
0.6568 Remote Similarity NPD3052 Approved
0.6568 Remote Similarity NPD3054 Approved
0.6564 Remote Similarity NPD7258 Clinical (unspecified phase)
0.6559 Remote Similarity NPD3451 Clinical (unspecified phase)
0.6556 Remote Similarity NPD5722 Discontinued
0.6554 Remote Similarity NPD6662 Clinical (unspecified phase)
0.6554 Remote Similarity NPD2122 Discontinued
0.6552 Remote Similarity NPD8323 Discontinued
0.6548 Remote Similarity NPD3142 Approved
0.6548 Remote Similarity NPD3140 Approved

  Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data