Structure

Physi-Chem Properties

Molecular Weight:  374.1
Volume:  366.661
LogP:  4.785
LogD:  2.767
LogS:  -3.914
# Rotatable Bonds:  6
TPSA:  130.36
# H-Bond Aceptor:  8
# H-Bond Donor:  3
# Rings:  2
# Heavy Atoms:  8

MedChem Properties

QED Drug-Likeness Score:  0.423
Synthetic Accessibility Score:  2.82
Fsp3:  0.211
Lipinski Rule-of-5:  Accepted
Pfizer Rule:  Accepted
GSK Rule:  Rejected
BMS Rule:  1
Golden Triangle Rule:  Accepted
Chelating Alert:  0
PAINS Alert:  0

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

Caco-2 Permeability:  -5.131
MDCK Permeability:  1.1761719179048669e-05
Pgp-inhibitor:  0.007
Pgp-substrate:  0.012
Human Intestinal Absorption (HIA):  0.215
20% Bioavailability (F20%):  0.018
30% Bioavailability (F30%):  0.009

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):  0.01
Plasma Protein Binding (PPB):  99.50946807861328%
Volume Distribution (VD):  0.432
Pgp-substrate:  1.9069141149520874%

ADMET: Metabolism

CYP1A2-inhibitor:  0.78
CYP1A2-substrate:  0.723
CYP2C19-inhibitor:  0.358
CYP2C19-substrate:  0.066
CYP2C9-inhibitor:  0.768
CYP2C9-substrate:  0.411
CYP2D6-inhibitor:  0.224
CYP2D6-substrate:  0.175
CYP3A4-inhibitor:  0.33
CYP3A4-substrate:  0.121

ADMET: Excretion

Clearance (CL):  7.307
Half-life (T1/2):  0.731

ADMET: Toxicity

hERG Blockers:  0.002
Human Hepatotoxicity (H-HT):  0.01
Drug-inuced Liver Injury (DILI):  0.206
AMES Toxicity:  0.073
Rat Oral Acute Toxicity:  0.02
Maximum Recommended Daily Dose:  0.921
Skin Sensitization:  0.846
Carcinogencity:  0.024
Eye Corrosion:  0.01
Eye Irritation:  0.946
Respiratory Toxicity:  0.378

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Similar NPs/Drugs  

  Natural Product: NPC149618

Natural Product ID:  NPC149618
Common Name*:   Atranorin
IUPAC Name:   (3-hydroxy-4-methoxycarbonyl-2,5-dimethylphenyl) 3-formyl-2,4-dihydroxy-6-methylbenzoate
Synonyms:   NSC-685591
Standard InCHIKey:  YLOYKYXNDHOHHT-UHFFFAOYSA-N
Standard InCHI:  InChI=1S/C19H18O8/c1-8-5-12(21)11(7-20)17(23)15(8)19(25)27-13-6-9(2)14(18(24)26-4)16(22)10(13)3/h5-7,21-23H,1-4H3
SMILES:  COC(=O)c1c(C)cc(c(c1O)C)OC(=O)c1c(C)cc(c(c1O)C=O)O
Synthetic Gene Cluster:   n.a.
ChEMBL Identifier:   CHEMBL173395
PubChem CID:   68066
Chemical Classification**:  
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0000261] Phenylpropanoids and polyketides
      • [CHEMONTID:0001645] Depsides and depsidones

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO17539 Ajuga decumbens Species Lamiaceae Eukaryota flowering whole plant n.a. n.a. PMID[10425119]
NPO10332 Garcinia atroviridis Species Clusiaceae Eukaryota roots n.a. n.a. PMID[11473441]
NPO25089 Cinchona calisaya Species Rubiaceae Eukaryota n.a. n.a. n.a. PMID[11992775]
NPO27055 Scabiosa tschiliensis Species Caprifoliaceae Eukaryota n.a. n.a. n.a. PMID[15104490]
NPO7067 Stellera chamaejasme Species Thymelaeaceae Eukaryota n.a. root n.a. PMID[15997133]
NPO7067 Stellera chamaejasme Species Thymelaeaceae Eukaryota n.a. root n.a. PMID[16141313]
NPO7067 Stellera chamaejasme Species Thymelaeaceae Eukaryota n.a. callus n.a. PMID[22368856]
NPO7067 Stellera chamaejasme Species Thymelaeaceae Eukaryota n.a. n.a. n.a. PMID[23611151]
NPO8625 Rorippa indica Species Brassicaceae Eukaryota n.a. root n.a. PMID[24254774]
NPO7067 Stellera chamaejasme Species Thymelaeaceae Eukaryota roots n.a. n.a. PMID[24931277]
NPO12221 Acacia saligna Species Fabaceae Eukaryota n.a. n.a. n.a. PMID[25183120]
NPO7067 Stellera chamaejasme Species Thymelaeaceae Eukaryota n.a. n.a. n.a. PMID[26562066]
NPO17539 Ajuga decumbens Species Lamiaceae Eukaryota n.a. n.a. n.a. PMID[9748375]
NPO7067 Stellera chamaejasme Species Thymelaeaceae Eukaryota n.a. root n.a. Database[Article]
NPO17528 Chelonia mydas Species Cheloniidae Eukaryota n.a. n.a. Database[FooDB]
NPO7067 Stellera chamaejasme Species Thymelaeaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO8465 Maesa indica Species Primulaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO7916 Vanilla planifolia Species Orchidaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO25809 Helleborus niger Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO12127 Parmelia saxatilis Species Parmeliaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO4334 Garcinia griffithii Species Clusiaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO17539 Ajuga decumbens Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO27055 Scabiosa tschiliensis Species Caprifoliaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO17539 Ajuga decumbens Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO8465 Maesa indica Species Primulaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO11322 Acacia dealbata Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO12127 Parmelia saxatilis Species Parmeliaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO8625 Rorippa indica Species Brassicaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO25089 Cinchona calisaya Species Rubiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO4334 Garcinia griffithii Species Clusiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO16103 Amana edulis Species Liliaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO7067 Stellera chamaejasme Species Thymelaeaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO25809 Helleborus niger Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO7916 Vanilla planifolia Species Orchidaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO7067 Stellera chamaejasme Species Thymelaeaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO17539 Ajuga decumbens Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO12127 Parmelia saxatilis Species Parmeliaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO17539 Ajuga decumbens Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO16103 Amana edulis Species Liliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO23508 Fagraea obovata Species Gentianaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21667 Acacia crombei Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26733 Hispidella hispanica Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO3334 Dicranum japonicum Species Dicranaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25809 Helleborus niger Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12230 Nemuaron vieillardii Species Atherospermataceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21407 Mytilus trossulus Species Mytilidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO1286 Parmelia furfuracea Species Parmeliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26438 Glycosmis macrantha Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8465 Maesa indica Species Primulaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15975 Rollinia sylvatica Species Annonaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11687 Oldenlandia hedyotidea Species Rubiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO27306 Sterculia urens Species Malvaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO7133 Kniphofia uvaria Species Asphodelaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11621 Maesa laxiflora Species Primulaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19943 Fleischmannia hymenophylla Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO5847 Moghania faginea n.a. n.a. n.a. n.a. n.a. n.a. Database[UNPD]
NPO18804 Tillandsia fasciculata Species Bromeliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO22010 Dasyscyphus nidulus Species Hyaloscyphaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18807 Coffea pseudozanguebariae Species Rubiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13194 Gentiana purpurea Species Gentianaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25511 Streptomyces ghanaensis Species Streptomycetaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO23800 Bohadschia graeffei Species Holothuriidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9731 Roccella fuciformis Species Roccellaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO23845 Sulcaria sulcata Species Parmeliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO6552 Astrocasia phyllanthoides Species Phyllanthaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO10332 Garcinia atroviridis Species Clusiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18984 Aster lautureanus Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25089 Cinchona calisaya Species Rubiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO2097 Caloplaca percrocata Species Teloschistaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO27055 Scabiosa tschiliensis Species Caprifoliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO4517 Laggera tomentosa Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9715 Hypericum richeri Species Hypericaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11322 Acacia dealbata Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO7067 Stellera chamaejasme Species Thymelaeaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25703 Heliophila longifolia Species Brassicaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9084 Rumex confertus Species Polygonaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8625 Rorippa indica Species Brassicaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO7203 Lindera lucida Species Lauraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24013 Chrysomela tremula Species Chrysomelidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO2258 Johnius belangerii Species Sciaenidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO27586 Vernonia echioides Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20660 Rhizoctonia leguminicola Species n.a. Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8803 Malus coronaria Species Rosaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12221 Acacia saligna Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO4891 Lentinellus ursinus Species Auriscalpiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO5139 Lepidium hyssopifolium Species Brassicaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18006 Tura candida n.a. n.a. n.a. n.a. n.a. n.a. Database[UNPD]
NPO20304 Astragalus pectinatus Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17539 Ajuga decumbens Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17423 Solanum coccineum Species Solanaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25908 Cladonia mitis Species Cladoniaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13015 Pilosella officinarum Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO4334 Garcinia griffithii Species Clusiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9559 Tinospora cordifolia Species Menispermaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO27065 Rottlera tinctoria n.a. n.a. n.a. n.a. n.a. n.a. Database[UNPD]
NPO17055 Cyclanthera pedata Species Cucurbitaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12127 Parmelia saxatilis Species Parmeliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO7916 Vanilla planifolia Species Orchidaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18967 Cedrela mexicana Species Meliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17528 Chelonia mydas Species Cheloniidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20689 Roystonea regia Species Arecaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO27359 Cucumis prophetarum Species Cucurbitaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24450 Ocotea bucherii Species Lauraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO22845 Clematis stans Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO6307 Salix lasiolepis Species Salicaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24532 Ula pilosa Species Pediciidae Eukaryota n.a. n.a. n.a. Database[UNPD]

☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  NP Quantity Composition/Concentration

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference

☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT12 Individual Protein Human immunodeficiency virus type 1 integrase Human immunodeficiency virus 1 Inhibition = 94.7 % PMID[529505]
NPT12 Individual Protein Human immunodeficiency virus type 1 integrase Human immunodeficiency virus 1 Inhibition = 76.9 % PMID[529505]
NPT12 Individual Protein Human immunodeficiency virus type 1 integrase Human immunodeficiency virus 1 IC50 = 61000.0 nM PMID[529505]
NPT12 Individual Protein Human immunodeficiency virus type 1 integrase Human immunodeficiency virus 1 IC50 = 62400.0 nM PMID[529505]
NPT12 Individual Protein Human immunodeficiency virus type 1 integrase Human immunodeficiency virus 1 IC50 = 36000.0 nM PMID[529505]
NPT12 Individual Protein Human immunodeficiency virus type 1 integrase Human immunodeficiency virus 1 IC50 = 44000.0 nM PMID[529505]
NPT12 Individual Protein Human immunodeficiency virus type 1 integrase Human immunodeficiency virus 1 IC50 = 128000.0 nM PMID[529505]
NPT1195 Cell Line PMNL IC50 = 6000.0 nM PMID[529506]
NPT941 Cell Line HaCaT Homo sapiens IC50 > 5000.0 nM PMID[529507]
NPT178 Individual Protein Protein-tyrosine phosphatase 1B Homo sapiens IC50 = 63500.0 nM PMID[529508]
NPT109 Individual Protein Cytochrome P450 3A4 Homo sapiens Potency = 12589.3 nM PMID[529509]
NPT50 Individual Protein Tyrosyl-DNA phosphodiesterase 1 Homo sapiens Potency n.a. 4109.5 nM PMID[529509]
NPT50 Individual Protein Tyrosyl-DNA phosphodiesterase 1 Homo sapiens Potency n.a. 5804.8 nM PMID[529509]
NPT2 Others Unspecified IC50 > 200000.0 nM PMID[529506]
NPT2 Others Unspecified Activity = 0.0 umol PMID[529506]
NPT1 Others Radical scavenging activity Activity = 11.46 /M/s PMID[529506]
NPT2701 Organism Pythium debaryanum Pythium debaryanum ED50 = 44.79 ug ml-1 PMID[529510]
NPT961 Organism Pythium aphanidermatum Pythium aphanidermatum ED50 = 104.73 ug ml-1 PMID[529510]
NPT2702 Organism Fusarium udum Fusarium udum ED50 = 50.32 ug ml-1 PMID[529510]
NPT2703 Organism Rhizoctonia bataticola Rhizoctonia bataticola ED50 = 58.82 ug ml-1 PMID[529510]
NPT529 Organism Rhizoctonia solani Rhizoctonia solani ED50 = 64.63 ug ml-1 PMID[529510]
NPT722 Organism Athelia rolfsii Athelia rolfsii ED50 = 39.7 ug ml-1 PMID[529510]
NPT2701 Organism Pythium debaryanum Pythium debaryanum Inhibition = 56.33 % PMID[529510]
NPT2701 Organism Pythium debaryanum Pythium debaryanum Inhibition = 78.0 % PMID[529510]
NPT2701 Organism Pythium debaryanum Pythium debaryanum Inhibition = 89.67 % PMID[529510]
NPT961 Organism Pythium aphanidermatum Pythium aphanidermatum Inhibition = 22.0 % PMID[529510]
NPT961 Organism Pythium aphanidermatum Pythium aphanidermatum Inhibition = 43.0 % PMID[529510]
NPT961 Organism Pythium aphanidermatum Pythium aphanidermatum Inhibition = 60.33 % PMID[529510]
NPT2702 Organism Fusarium udum Fusarium udum Inhibition = 50.0 % PMID[529510]
NPT2702 Organism Fusarium udum Fusarium udum Inhibition = 81.34 % PMID[529510]
NPT2702 Organism Fusarium udum Fusarium udum Inhibition = 90.0 % PMID[529510]
NPT2703 Organism Rhizoctonia bataticola Rhizoctonia bataticola Inhibition = 44.33 % PMID[529510]
NPT2703 Organism Rhizoctonia bataticola Rhizoctonia bataticola Inhibition = 67.67 % PMID[529510]
NPT2703 Organism Rhizoctonia bataticola Rhizoctonia bataticola Inhibition = 80.0 % PMID[529510]
NPT529 Organism Rhizoctonia solani Rhizoctonia solani Inhibition = 40.0 % PMID[529510]
NPT529 Organism Rhizoctonia solani Rhizoctonia solani Inhibition = 62.0 % PMID[529510]
NPT529 Organism Rhizoctonia solani Rhizoctonia solani Inhibition = 81.33 % PMID[529510]
NPT722 Organism Athelia rolfsii Athelia rolfsii Inhibition = 67.34 % PMID[529510]
NPT722 Organism Athelia rolfsii Athelia rolfsii Inhibition = 89.67 % PMID[529510]
NPT722 Organism Athelia rolfsii Athelia rolfsii Inhibition = 100.0 % PMID[529510]
NPT776 Organism Spodoptera littoralis Spodoptera littoralis Activity = 52.0 % PMID[529511]
NPT776 Organism Spodoptera littoralis Spodoptera littoralis Activity = 51.0 % PMID[529511]
NPT776 Organism Spodoptera littoralis Spodoptera littoralis ED50 > 110.0 uM PMID[529511]
NPT73 Individual Protein Solute carrier organic anion transporter family member 1B1 Homo sapiens Inhibition = 122.9 % PMID[529512]
NPT72 Individual Protein Solute carrier organic anion transporter family member 1B3 Homo sapiens Inhibition = 109.7 % PMID[529512]
NPT2 Others Unspecified Potency n.a. 7943.3 nM PMID[529509]
NPT2 Others Unspecified Potency n.a. 15848.9 nM PMID[529509]
NPT956 Individual Protein Prostaglandin E synthase Homo sapiens IC50 = 1150.0 nM PMID[529513]
NPT20555 ORGANISM SARS-CoV-2 Severe acute respiratory syndrome coronavirus 2 IC50 > 20000.0 nM PMID[529514]
NPT20555 ORGANISM SARS-CoV-2 Severe acute respiratory syndrome coronavirus 2 IC50 > 19952.62 nM PMID[529514]
NPT2 Others Unspecified IC50 > 100000.0 nM PMID[529515]

☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

  Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC149618 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC89625
0.9796 High Similarity NPC133856
0.9735 High Similarity NPC143050
0.966 High Similarity NPC291049
0.966 High Similarity NPC233267
0.9597 High Similarity NPC273483
0.9592 High Similarity NPC105415
0.9408 High Similarity NPC146211
0.9388 High Similarity NPC134621
0.9333 High Similarity NPC60413
0.9324 High Similarity NPC163846
0.9324 High Similarity NPC225173
0.9324 High Similarity NPC237208
0.932 High Similarity NPC66404
0.932 High Similarity NPC95123
0.9267 High Similarity NPC6923
0.9262 High Similarity NPC125801
0.9257 High Similarity NPC29577
0.9245 High Similarity NPC246716
0.9241 High Similarity NPC272485
0.9241 High Similarity NPC292788
0.9211 High Similarity NPC217447
0.92 High Similarity NPC37139
0.9195 High Similarity NPC473927
0.9184 High Similarity NPC105648
0.9182 High Similarity NPC26568
0.915 High Similarity NPC472799
0.9145 High Similarity NPC478148
0.9145 High Similarity NPC474417
0.9145 High Similarity NPC232645
0.9145 High Similarity NPC72958
0.9145 High Similarity NPC149526
0.9139 High Similarity NPC97029
0.9139 High Similarity NPC65589
0.9139 High Similarity NPC288036
0.9139 High Similarity NPC158338
0.9139 High Similarity NPC100985
0.9139 High Similarity NPC97028
0.9133 High Similarity NPC12305
0.913 High Similarity NPC181523
0.9125 High Similarity NPC20543
0.9125 High Similarity NPC1827
0.9125 High Similarity NPC239440
0.9125 High Similarity NPC10576
0.9116 High Similarity NPC37530
0.9116 High Similarity NPC220106
0.9097 High Similarity NPC263483
0.9085 High Similarity NPC154683
0.9085 High Similarity NPC87708
0.9085 High Similarity NPC40356
0.9079 High Similarity NPC307780
0.9079 High Similarity NPC158866
0.9079 High Similarity NPC119929
0.9079 High Similarity NPC150928
0.9079 High Similarity NPC309979
0.9074 High Similarity NPC139350
0.9073 High Similarity NPC7025
0.9073 High Similarity NPC27221
0.9073 High Similarity NPC256672
0.9067 High Similarity NPC267509
0.9057 High Similarity NPC20216
0.9054 High Similarity NPC250755
0.9051 High Similarity NPC156082
0.9048 High Similarity NPC165172
0.9048 High Similarity NPC99441
0.9026 High Similarity NPC210942
0.9026 High Similarity NPC169990
0.9007 High Similarity NPC7943
0.9007 High Similarity NPC123202
0.9007 High Similarity NPC22005
0.9 High Similarity NPC312789
0.9 High Similarity NPC32470
0.8994 High Similarity NPC112981
0.8993 High Similarity NPC84266
0.8993 High Similarity NPC159721
0.8986 High Similarity NPC1704
0.8986 High Similarity NPC67650
0.8974 High Similarity NPC272196
0.8961 High Similarity NPC175978
0.8961 High Similarity NPC271681
0.8957 High Similarity NPC289147
0.8954 High Similarity NPC202595
0.8954 High Similarity NPC473466
0.8954 High Similarity NPC474660
0.8954 High Similarity NPC325983
0.8947 High Similarity NPC471641
0.8947 High Similarity NPC240253
0.8947 High Similarity NPC172329
0.8947 High Similarity NPC240622
0.8947 High Similarity NPC2569
0.8947 High Similarity NPC471642
0.8938 High Similarity NPC125465
0.8938 High Similarity NPC30027
0.8933 High Similarity NPC42540
0.8933 High Similarity NPC151607
0.8926 High Similarity NPC182255
0.8926 High Similarity NPC94076
0.8917 High Similarity NPC474373
0.891 High Similarity NPC4547
0.8909 High Similarity NPC113446
0.8903 High Similarity NPC329844
0.8903 High Similarity NPC208806
0.8896 High Similarity NPC227166
0.8889 High Similarity NPC476684
0.8889 High Similarity NPC109827
0.8889 High Similarity NPC124470
0.8889 High Similarity NPC17219
0.8882 High Similarity NPC34802
0.8874 High Similarity NPC473692
0.8874 High Similarity NPC75694
0.8867 High Similarity NPC51106
0.8867 High Similarity NPC471731
0.8867 High Similarity NPC472006
0.8867 High Similarity NPC469542
0.8867 High Similarity NPC310340
0.8859 High Similarity NPC16455
0.8859 High Similarity NPC307990
0.8854 High Similarity NPC44199
0.8844 High Similarity NPC135837
0.8831 High Similarity NPC194379
0.8831 High Similarity NPC470568
0.8827 High Similarity NPC49487
0.8827 High Similarity NPC99613
0.8816 High Similarity NPC99454
0.8816 High Similarity NPC290133
0.8816 High Similarity NPC24136
0.8816 High Similarity NPC187282
0.8816 High Similarity NPC130176
0.8816 High Similarity NPC470322
0.8816 High Similarity NPC154217
0.8812 High Similarity NPC474350
0.8808 High Similarity NPC189650
0.88 High Similarity NPC474385
0.88 High Similarity NPC471733
0.88 High Similarity NPC469579
0.8797 High Similarity NPC85121
0.8795 High Similarity NPC329161
0.8795 High Similarity NPC470091
0.8795 High Similarity NPC240887
0.8792 High Similarity NPC472601
0.8792 High Similarity NPC168471
0.8792 High Similarity NPC472600
0.879 High Similarity NPC54928
0.879 High Similarity NPC180924
0.8782 High Similarity NPC214632
0.8782 High Similarity NPC135522
0.8782 High Similarity NPC475895
0.8776 High Similarity NPC158481
0.8774 High Similarity NPC209142
0.8774 High Similarity NPC312549
0.8774 High Similarity NPC470569
0.8774 High Similarity NPC258249
0.8773 High Similarity NPC298778
0.8773 High Similarity NPC477573
0.8773 High Similarity NPC477571
0.8773 High Similarity NPC477572
0.8766 High Similarity NPC329933
0.8766 High Similarity NPC10027
0.8766 High Similarity NPC473978
0.8766 High Similarity NPC65775
0.8765 High Similarity NPC76647
0.8758 High Similarity NPC142863
0.8758 High Similarity NPC245584
0.8758 High Similarity NPC137296
0.8758 High Similarity NPC289042
0.8758 High Similarity NPC118027
0.8758 High Similarity NPC56433
0.8758 High Similarity NPC190648
0.8758 High Similarity NPC8817
0.8758 High Similarity NPC126767
0.8758 High Similarity NPC312929
0.875 High Similarity NPC472034
0.875 High Similarity NPC1886
0.875 High Similarity NPC271288
0.875 High Similarity NPC196137
0.8742 High Similarity NPC36181
0.8742 High Similarity NPC186325
0.8742 High Similarity NPC471639
0.8742 High Similarity NPC47623
0.8742 High Similarity NPC471643
0.8742 High Similarity NPC470810
0.8742 High Similarity NPC243701
0.8734 High Similarity NPC96342
0.8734 High Similarity NPC212967
0.8734 High Similarity NPC246647
0.8734 High Similarity NPC164110
0.8734 High Similarity NPC201127
0.8733 High Similarity NPC275734
0.8733 High Similarity NPC472604
0.8733 High Similarity NPC475730
0.8733 High Similarity NPC472603
0.8733 High Similarity NPC472605
0.8727 High Similarity NPC474345
0.872 High Similarity NPC158226
0.8716 High Similarity NPC194579
0.8716 High Similarity NPC70380
0.871 High Similarity NPC474735
0.871 High Similarity NPC255641
0.871 High Similarity NPC475460
0.871 High Similarity NPC227122

  Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC149618 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.9026 High Similarity NPD7819 Suspended
0.8874 High Similarity NPD2532 Approved
0.8874 High Similarity NPD2534 Approved
0.8874 High Similarity NPD2533 Approved
0.8725 High Similarity NPD970 Clinical (unspecified phase)
0.8688 High Similarity NPD6959 Discontinued
0.8654 High Similarity NPD7411 Suspended
0.8634 High Similarity NPD6232 Discontinued
0.8591 High Similarity NPD1551 Phase 2
0.8526 High Similarity NPD3226 Approved
0.8506 High Similarity NPD4378 Clinical (unspecified phase)
0.85 High Similarity NPD7075 Discontinued
0.8491 Intermediate Similarity NPD8443 Clinical (unspecified phase)
0.8476 Intermediate Similarity NPD7473 Discontinued
0.8428 Intermediate Similarity NPD2393 Clinical (unspecified phase)
0.8415 Intermediate Similarity NPD7852 Clinical (unspecified phase)
0.8373 Intermediate Similarity NPD5844 Phase 1
0.8354 Intermediate Similarity NPD6599 Discontinued
0.8323 Intermediate Similarity NPD7768 Phase 2
0.8313 Intermediate Similarity NPD7096 Clinical (unspecified phase)
0.8289 Intermediate Similarity NPD1552 Clinical (unspecified phase)
0.8289 Intermediate Similarity NPD1550 Clinical (unspecified phase)
0.8269 Intermediate Similarity NPD7410 Clinical (unspecified phase)
0.8267 Intermediate Similarity NPD1607 Approved
0.825 Intermediate Similarity NPD6801 Discontinued
0.8247 Intermediate Similarity NPD3750 Approved
0.8235 Intermediate Similarity NPD1549 Phase 2
0.8225 Intermediate Similarity NPD6559 Discontinued
0.8224 Intermediate Similarity NPD2935 Discontinued
0.8205 Intermediate Similarity NPD6799 Approved
0.8182 Intermediate Similarity NPD5710 Approved
0.8182 Intermediate Similarity NPD5711 Approved
0.8182 Intermediate Similarity NPD7421 Clinical (unspecified phase)
0.8165 Intermediate Similarity NPD920 Approved
0.816 Intermediate Similarity NPD3749 Approved
0.8158 Intermediate Similarity NPD1510 Phase 2
0.8148 Intermediate Similarity NPD3817 Phase 2
0.8141 Intermediate Similarity NPD643 Clinical (unspecified phase)
0.8137 Intermediate Similarity NPD1934 Approved
0.8133 Intermediate Similarity NPD1240 Approved
0.8125 Intermediate Similarity NPD4380 Phase 2
0.8121 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.8105 Intermediate Similarity NPD2796 Approved
0.8098 Intermediate Similarity NPD4868 Clinical (unspecified phase)
0.8065 Intermediate Similarity NPD1243 Approved
0.8052 Intermediate Similarity NPD2346 Discontinued
0.8039 Intermediate Similarity NPD1509 Clinical (unspecified phase)
0.8038 Intermediate Similarity NPD642 Clinical (unspecified phase)
0.8013 Intermediate Similarity NPD6398 Clinical (unspecified phase)
0.8013 Intermediate Similarity NPD4628 Phase 3
0.8 Intermediate Similarity NPD919 Approved
0.7988 Intermediate Similarity NPD3882 Suspended
0.7975 Intermediate Similarity NPD2801 Approved
0.7975 Intermediate Similarity NPD1465 Phase 2
0.7975 Intermediate Similarity NPD7390 Discontinued
0.7975 Intermediate Similarity NPD1511 Approved
0.7953 Intermediate Similarity NPD5953 Discontinued
0.7949 Intermediate Similarity NPD2800 Approved
0.7939 Intermediate Similarity NPD4381 Clinical (unspecified phase)
0.7922 Intermediate Similarity NPD2799 Discontinued
0.7922 Intermediate Similarity NPD3748 Approved
0.7875 Intermediate Similarity NPD1512 Approved
0.7871 Intermediate Similarity NPD6100 Approved
0.7871 Intermediate Similarity NPD6099 Approved
0.787 Intermediate Similarity NPD6167 Clinical (unspecified phase)
0.787 Intermediate Similarity NPD6166 Phase 2
0.787 Intermediate Similarity NPD6168 Clinical (unspecified phase)
0.7867 Intermediate Similarity NPD6832 Phase 2
0.784 Intermediate Similarity NPD5808 Clinical (unspecified phase)
0.7836 Intermediate Similarity NPD7804 Clinical (unspecified phase)
0.7792 Intermediate Similarity NPD6651 Approved
0.7791 Intermediate Similarity NPD7074 Phase 3
0.7785 Intermediate Similarity NPD1203 Approved
0.7778 Intermediate Similarity NPD3818 Discontinued
0.7756 Intermediate Similarity NPD5408 Approved
0.7756 Intermediate Similarity NPD5406 Approved
0.7756 Intermediate Similarity NPD5404 Approved
0.7756 Intermediate Similarity NPD5405 Approved
0.7738 Intermediate Similarity NPD5494 Approved
0.7733 Intermediate Similarity NPD7054 Approved
0.7733 Intermediate Similarity NPD7286 Phase 2
0.7716 Intermediate Similarity NPD5403 Approved
0.7711 Intermediate Similarity NPD5402 Approved
0.7709 Intermediate Similarity NPD7879 Clinical (unspecified phase)
0.7702 Intermediate Similarity NPD7004 Clinical (unspecified phase)
0.7697 Intermediate Similarity NPD4625 Phase 3
0.7688 Intermediate Similarity NPD7472 Approved
0.7673 Intermediate Similarity NPD1878 Clinical (unspecified phase)
0.7657 Intermediate Similarity NPD4338 Clinical (unspecified phase)
0.7647 Intermediate Similarity NPD411 Approved
0.7647 Intermediate Similarity NPD3268 Approved
0.7647 Intermediate Similarity NPD1699 Clinical (unspecified phase)
0.7647 Intermediate Similarity NPD7229 Phase 3
0.7644 Intermediate Similarity NPD6797 Phase 2
0.7614 Intermediate Similarity NPD8313 Approved
0.7614 Intermediate Similarity NPD8312 Approved
0.7613 Intermediate Similarity NPD1899 Clinical (unspecified phase)
0.76 Intermediate Similarity NPD7251 Discontinued
0.76 Intermediate Similarity NPD1283 Approved
0.7598 Intermediate Similarity NPD8397 Clinical (unspecified phase)
0.7593 Intermediate Similarity NPD5401 Approved
0.759 Intermediate Similarity NPD37 Approved
0.7588 Intermediate Similarity NPD7199 Phase 2
0.7588 Intermediate Similarity NPD1247 Approved
0.7584 Intermediate Similarity NPD1608 Approved
0.7584 Intermediate Similarity NPD9717 Approved
0.758 Intermediate Similarity NPD4308 Phase 3
0.7574 Intermediate Similarity NPD6234 Discontinued
0.7572 Intermediate Similarity NPD7177 Discontinued
0.7562 Intermediate Similarity NPD7003 Approved
0.756 Intermediate Similarity NPD4966 Approved
0.756 Intermediate Similarity NPD4965 Approved
0.756 Intermediate Similarity NPD4967 Phase 2
0.7557 Intermediate Similarity NPD7808 Phase 3
0.7557 Intermediate Similarity NPD4419 Clinical (unspecified phase)
0.755 Intermediate Similarity NPD2797 Approved
0.7548 Intermediate Similarity NPD4060 Phase 1
0.7546 Intermediate Similarity NPD6273 Approved
0.7543 Intermediate Similarity NPD7993 Clinical (unspecified phase)
0.7532 Intermediate Similarity NPD2313 Discontinued
0.7532 Intermediate Similarity NPD4907 Clinical (unspecified phase)
0.7517 Intermediate Similarity NPD422 Phase 1
0.75 Intermediate Similarity NPD7184 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD4626 Approved
0.75 Intermediate Similarity NPD230 Phase 1
0.7486 Intermediate Similarity NPD8434 Phase 2
0.7485 Intermediate Similarity NPD7422 Clinical (unspecified phase)
0.7484 Intermediate Similarity NPD2344 Approved
0.7468 Intermediate Similarity NPD7033 Discontinued
0.7436 Intermediate Similarity NPD2979 Phase 3
0.7432 Intermediate Similarity NPD5691 Approved
0.7421 Intermediate Similarity NPD2438 Suspended
0.7421 Intermediate Similarity NPD4477 Approved
0.7421 Intermediate Similarity NPD4476 Approved
0.7419 Intermediate Similarity NPD7501 Clinical (unspecified phase)
0.741 Intermediate Similarity NPD7458 Discontinued
0.7403 Intermediate Similarity NPD4908 Phase 1
0.74 Intermediate Similarity NPD1281 Approved
0.7399 Intermediate Similarity NPD3926 Phase 2
0.7396 Intermediate Similarity NPD4288 Approved
0.7396 Intermediate Similarity NPD7782 Clinical (unspecified phase)
0.7396 Intermediate Similarity NPD7783 Phase 2
0.7394 Intermediate Similarity NPD6980 Clinical (unspecified phase)
0.7389 Intermediate Similarity NPD5123 Clinical (unspecified phase)
0.7389 Intermediate Similarity NPD5124 Phase 1
0.7389 Intermediate Similarity NPD447 Suspended
0.7383 Intermediate Similarity NPD17 Approved
0.7382 Intermediate Similarity NPD8151 Discontinued
0.7375 Intermediate Similarity NPD2343 Clinical (unspecified phase)
0.7371 Intermediate Similarity NPD7893 Clinical (unspecified phase)
0.7368 Intermediate Similarity NPD3225 Approved
0.7325 Intermediate Similarity NPD943 Approved
0.7325 Intermediate Similarity NPD4307 Phase 2
0.7321 Intermediate Similarity NPD7615 Clinical (unspecified phase)
0.732 Intermediate Similarity NPD3267 Approved
0.732 Intermediate Similarity NPD3266 Approved
0.7308 Intermediate Similarity NPD3764 Approved
0.7308 Intermediate Similarity NPD6410 Clinical (unspecified phase)
0.7303 Intermediate Similarity NPD4749 Approved
0.7302 Intermediate Similarity NPD7435 Discontinued
0.7301 Intermediate Similarity NPD2309 Approved
0.7293 Intermediate Similarity NPD8150 Discontinued
0.7285 Intermediate Similarity NPD1610 Phase 2
0.7285 Intermediate Similarity NPD1201 Approved
0.7273 Intermediate Similarity NPD7228 Approved
0.7267 Intermediate Similarity NPD1471 Phase 3
0.7267 Intermediate Similarity NPD1778 Approved
0.7258 Intermediate Similarity NPD8090 Clinical (unspecified phase)
0.7248 Intermediate Similarity NPD9545 Approved
0.7234 Intermediate Similarity NPD6777 Approved
0.7234 Intermediate Similarity NPD6782 Approved
0.7234 Intermediate Similarity NPD6780 Approved
0.7234 Intermediate Similarity NPD6781 Approved
0.7234 Intermediate Similarity NPD6776 Approved
0.7234 Intermediate Similarity NPD6778 Approved
0.7234 Intermediate Similarity NPD6779 Approved
0.7213 Intermediate Similarity NPD4287 Approved
0.7212 Intermediate Similarity NPD6143 Clinical (unspecified phase)
0.7208 Intermediate Similarity NPD1470 Approved
0.7208 Intermediate Similarity NPD1164 Approved
0.7205 Intermediate Similarity NPD2531 Phase 2
0.72 Intermediate Similarity NPD1651 Approved
0.7197 Intermediate Similarity NPD1296 Phase 2
0.7171 Intermediate Similarity NPD1611 Approved
0.717 Intermediate Similarity NPD6355 Discontinued
0.7161 Intermediate Similarity NPD1019 Discontinued
0.7161 Intermediate Similarity NPD6917 Clinical (unspecified phase)
0.7161 Intermediate Similarity NPD2798 Approved
0.7151 Intermediate Similarity NPD4360 Phase 2
0.7151 Intermediate Similarity NPD4363 Phase 3
0.7135 Intermediate Similarity NPD5760 Phase 2
0.7135 Intermediate Similarity NPD5761 Phase 2
0.7133 Intermediate Similarity NPD1548 Phase 1
0.7124 Intermediate Similarity NPD3972 Approved
0.712 Intermediate Similarity NPD7697 Approved
0.712 Intermediate Similarity NPD7696 Phase 3
0.712 Intermediate Similarity NPD7698 Approved
0.7114 Intermediate Similarity NPD9493 Approved
0.7112 Intermediate Similarity NPD4361 Phase 2
0.7112 Intermediate Similarity NPD4362 Clinical (unspecified phase)

  Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data