Structure

Physi-Chem Properties

MedChem Properties

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

ADMET: Distribution

ADMET: Metabolism

ADMET: Excretion

ADMET: Toxicity

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs  

  Natural Product: NPC313663

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference

☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  NP Quantity Composition/Concentration

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference

☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT612 Individual Protein Canalicular multispecific organic anion transporter 1 Homo sapiens Activity = 97.0 % PMID[451142]
NPT492 Cell Line Caco-2 Homo sapiens Papp = 4.0 nm/s PMID[451145]
NPT251 Individual Protein Histamine H1 receptor Homo sapiens IC50 = 78.0 nM PMID[451145]
NPT251 Individual Protein Histamine H1 receptor Homo sapiens Ki = 27.0 nM PMID[451147]
NPT616 Cell Line MDCK Canis lupus familiaris logPapp = -6.32 n.a. PMID[451149]
NPT5174 Individual Protein Cholesteryl ester transfer protein Oryctolagus cuniculus Inhibition = 0.0 % PMID[451150]
NPT483 Individual Protein Prelamin-A/C Homo sapiens Potency = 158.5 nM PMID[451151]
NPT49 Individual Protein DNA-(apurinic or apyrimidinic site) lyase Homo sapiens Potency = 39810.7 nM PMID[451151]
NPT58 Individual Protein Bloom syndrome protein Homo sapiens Potency = 8.9 nM PMID[451151]
NPT443 Individual Protein Histone acetyltransferase GCN5 Homo sapiens Potency n.a. 39810.7 nM PMID[451156]
NPT62 Individual Protein 6-phospho-1-fructokinase Trypanosoma brucei Potency n.a. 33807.8 nM PMID[451156]
NPT492 Cell Line Caco-2 Homo sapiens logPapp = -5.7 n.a. PMID[451158]
NPT251 Individual Protein Histamine H1 receptor Homo sapiens IC50 = 78.0 nM PMID[451159]
NPT1733 Individual Protein Solute carrier organic anion transporter family member 1A2 Homo sapiens Km = 6400.0 nM PMID[451165]
NPT305 Individual Protein Solute carrier organic anion transporter family member 1A4 Rattus norvegicus Km = 6000.0 nM PMID[451165]
NPT622 Individual Protein Solute carrier organic anion transporter family member 2B1 Homo sapiens Inhibition = -5.8 % PMID[451168]
NPT616 Cell Line MDCK Canis lupus familiaris Papp = 6.6 ucm/s PMID[451169]
NPT616 Cell Line MDCK Canis lupus familiaris Ratio = 6.8 n.a. PMID[451169]
NPT104 Individual Protein Cerebroside-sulfatase Homo sapiens Potency n.a. 2685.5 nM PMID[451156]
NPT49 Individual Protein DNA-(apurinic or apyrimidinic site) lyase Homo sapiens Potency n.a. 177.8 nM PMID[451151]
NPT251 Individual Protein Histamine H1 receptor Homo sapiens IC50 = 15.0 nM PMID[451175]
NPT1463 Individual Protein Cytochrome P450 2J2 Homo sapiens IC50 > 50000.0 nM PMID[451177]
NPT984 Cell Line Hepatocyte CL = 117.0 uL.min-1.(10^6cells)-1 PMID[451179]
NPT984 Cell Line Hepatocyte Km = 4700.0 nM PMID[451179]
NPT984 Cell Line Hepatocyte CL = 17.0 uL.min-1.(10^6cells)-1 PMID[451179]
NPT622 Individual Protein Solute carrier organic anion transporter family member 2B1 Homo sapiens Drug uptake = 28.5 % PMID[451181]
NPT622 Individual Protein Solute carrier organic anion transporter family member 2B1 Homo sapiens Drug uptake = 121.0 % PMID[451181]
NPT622 Individual Protein Solute carrier organic anion transporter family member 2B1 Homo sapiens Drug uptake = 147.0 % PMID[451181]
NPT622 Individual Protein Solute carrier organic anion transporter family member 2B1 Homo sapiens Drug uptake = 0.056 uL PMID[451181]
NPT98 Individual Protein HERG Homo sapiens IC50 = 21570.0 nM PMID[451137]
NPT605 Organism Homo sapiens Homo sapiens T1/2 = 18.3 hr PMID[451138]
NPT27 Others Unspecified B = 65.0 % PMID[451138]
NPT27 Others Unspecified Vd = 5.6 L.kg-1 PMID[451138]
NPT98 Individual Protein HERG Homo sapiens IC50 = 23000.0 nM PMID[451139]
NPT98 Individual Protein HERG Homo sapiens IC50 = 21379.62 nM PMID[451140]
NPT98 Individual Protein HERG Homo sapiens IC50 = 23000.0 nM PMID[451141]
NPT98 Individual Protein HERG Homo sapiens IC50 = 65000.0 nM PMID[451143]
NPT98 Individual Protein HERG Homo sapiens IC50 = 21379.62 nM PMID[451144]
NPT35 Others n.a. LogD = 1.85 n.a. PMID[451144]
NPT32 Organism Mus musculus Mus musculus Inhibition = 70.0 % PMID[451145]
NPT32 Organism Mus musculus Mus musculus Inhibition = 61.0 % PMID[451145]
NPT32 Organism Mus musculus Mus musculus Inhibition = 6.0 % PMID[451145]
NPT27 Others Unspecified permeability = 2.8 10'-6 cm/s PMID[451146]
NPT605 Organism Homo sapiens Homo sapiens F = 30.0 % PMID[451146]
NPT98 Individual Protein HERG Homo sapiens Inhibition = 3.0 % PMID[451147]
NPT938 Organism Cavia porcellus Cavia porcellus ED50 = 0.08 mg.kg-1 PMID[451147]
NPT98 Individual Protein HERG Homo sapiens IC50 > 100000.0 nM PMID[451147]
NPT938 Organism Cavia porcellus Cavia porcellus MED = 100.0 mg kg-1 PMID[451147]
NPT98 Individual Protein HERG Homo sapiens IC50 > 100.0 nM PMID[451147]
NPT615 Tissue Skin Homo sapiens log Pe = -1.1 n.a. PMID[451148]
NPT35 Others n.a. LogD = 2.3 n.a. PMID[451148]
NPT27 Others Unspecified permeability = 0.06 10'-4 cm/s PMID[451149]
NPT35 Others n.a. Daq = 5.9 10'-6cm2/s PMID[451149]
NPT35 Others n.a. LogP = 2.08 n.a. PMID[451149]
NPT605 Organism Homo sapiens Homo sapiens F = 30.0 % PMID[451149]
NPT35 Others n.a. pKa = 4.2 n.a. PMID[451149]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Potency = 10000.0 nM PMID[451151]
NPT98 Individual Protein HERG Homo sapiens IC50 = 22908.68 nM PMID[451152]
NPT20596 PHENOTYPE Hepatotoxicity n.a. Composite Activity - Active = 0.0 n.a. PMID[451155]
NPT20596 PHENOTYPE Hepatotoxicity n.a. Composite Activity - Marginal = 0.0 n.a. PMID[451155]
NPT20596 PHENOTYPE Hepatotoxicity n.a. Alkaline Phosphatase Increase - Index Value = 0.0 n.a. PMID[451155]
NPT20596 PHENOTYPE Hepatotoxicity n.a. Alkaline Phosphatase Increase - Number of Reports < 4.0 n.a. PMID[451155]
NPT20596 PHENOTYPE Hepatotoxicity n.a. SGOT Increase - Index Value = 0.0 n.a. PMID[451155]
NPT20596 PHENOTYPE Hepatotoxicity n.a. SGOT Increase - Number of Reports < 4.0 n.a. PMID[451155]
NPT20596 PHENOTYPE Hepatotoxicity n.a. SGPT Increase - Index Value = 0.0 n.a. PMID[451155]
NPT20596 PHENOTYPE Hepatotoxicity n.a. SGPT Increase - Number of Reports < 4.0 n.a. PMID[451155]
NPT20596 PHENOTYPE Hepatotoxicity n.a. LDH Increase - Index Value = 0.0 n.a. PMID[451155]
NPT20596 PHENOTYPE Hepatotoxicity n.a. LDH Increase - Number of Reports < 4.0 n.a. PMID[451155]
NPT20596 PHENOTYPE Hepatotoxicity n.a. GGT Increase - Index Value = 0.0 n.a. PMID[451155]
NPT20596 PHENOTYPE Hepatotoxicity n.a. GGT Increase - Number of Reports < 4.0 n.a. PMID[451155]
NPT755 Individual Protein Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 Homo sapiens Potency n.a. 4775.5 nM PMID[451156]
NPT32 Organism Mus musculus Mus musculus Inhibition = 6.0 % PMID[451159]
NPT32 Organism Mus musculus Mus musculus Inhibition = 61.0 % PMID[451159]
NPT32 Organism Mus musculus Mus musculus ED70 = 4.84 mg kg-1 PMID[451159]
NPT32 Organism Mus musculus Mus musculus Activity = 62.0 % PMID[451159]
NPT2 Others Unspecified Potency n.a. 6309.6 nM PMID[451151]
NPT20596 PHENOTYPE Hepatotoxicity n.a. HepSE_bilirubinemia = 0.0 n.a. PMID[451161]
NPT20596 PHENOTYPE Hepatotoxicity n.a. HepSE_cholecystitis = 0.0 n.a. PMID[451161]
NPT20596 PHENOTYPE Hepatotoxicity n.a. HepSE_cholelithiasis = 0.0 n.a. PMID[451161]
NPT20596 PHENOTYPE Hepatotoxicity n.a. HepSE_cirrhosis = 0.0 n.a. PMID[451161]
NPT20596 PHENOTYPE Hepatotoxicity n.a. HepSE_elevated liver function tests = 0.0 n.a. PMID[451161]
NPT20596 PHENOTYPE Hepatotoxicity n.a. HepSE_hepatic failure = 0.0 n.a. PMID[451161]
NPT20596 PHENOTYPE Hepatotoxicity n.a. HepSE_hepatic necrosis = 0.0 n.a. PMID[451161]
NPT20596 PHENOTYPE Hepatotoxicity n.a. HepSE_hepatitis = 0.0 n.a. PMID[451161]
NPT20596 PHENOTYPE Hepatotoxicity n.a. HepSE_hepatomegaly = 0.0 n.a. PMID[451161]
NPT20596 PHENOTYPE Hepatotoxicity n.a. HepSE_jaundice = 0.0 n.a. PMID[451161]
NPT20596 PHENOTYPE Hepatotoxicity n.a. HepSE_liver disease = 0.0 n.a. PMID[451161]
NPT20596 PHENOTYPE Hepatotoxicity n.a. HepSE_liver fatty = 0.0 n.a. PMID[451161]
NPT20596 PHENOTYPE Hepatotoxicity n.a. HepSE_liver function tests abnormal = 0.0 n.a. PMID[451161]
NPT20596 PHENOTYPE Hepatotoxicity n.a. HepSE_Combined Scores = 0.0 n.a. PMID[451161]
NPT32 Organism Mus musculus Mus musculus Inhibition = 39.0 % PMID[451162]
NPT98 Individual Protein HERG Homo sapiens IC50 = 23000.0 nM PMID[451163]
NPT752 Individual Protein Solute carrier organic anion transporter family member 1A1 Rattus norvegicus Km = 32000.0 nM PMID[451165]
NPT72 Individual Protein Solute carrier organic anion transporter family member 1B3 Homo sapiens Inhibition = 6.0 % PMID[451168]
NPT73 Individual Protein Solute carrier organic anion transporter family member 1B1 Homo sapiens Inhibition = 28.9 % PMID[451168]
NPT27 Others Unspecified Ratio = 50.0 n.a. PMID[451169]
NPT317 Uncleic Acid Nucleic Acid BPR = 0.27 n.a. PMID[451169]
NPT317 Uncleic Acid Nucleic Acid BPR = 0.005 n.a. PMID[451169]
NPT20913 TISSUE Whole blood Homo sapiens Retention_time = 5.93 min PMID[451170]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Hepatotoxicity (moderate) = 1.0 n.a. PMID[451171]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Hepatotoxicity (moderate) = 1.8 % PMID[451171]
NPT2 Others Unspecified Hepatotoxicity (acute) = 0.0 n.a. PMID[451171]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Hepatotoxicity (acute) = 0.0 % PMID[451171]
NPT2 Others Unspecified Hepatotoxicity (cytolytic) = 0.0 n.a. PMID[451171]
NPT2 Others Unspecified Hepatotoxicity (choleostasis) = 0.0 n.a. PMID[451171]
NPT2 Others Unspecified Hepatotoxicity (severe hepatitis) = 0.0 n.a. PMID[451171]
NPT2 Others Unspecified Hepatotoxicity (chronic liver disease) = 0.0 n.a. PMID[451171]
NPT2 Others Unspecified Hepatotoxicity (cirrhosis) = 0.0 n.a. PMID[451171]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Hepatotoxicity (granulomatous hepatitis) = 0.0 n.a. PMID[451171]
NPT2 Others Unspecified Hepatotoxicity (association with vascular disease) = 0.0 n.a. PMID[451171]
NPT2 Others Unspecified Hepatotoxicity (steatosis) = 0.0 n.a. PMID[451171]
NPT2 Others Unspecified Hepatotoxicity (malignant tumour) = 0.0 n.a. PMID[451171]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Hepatotoxicity (benign tumour) = 0.0 n.a. PMID[451171]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Fu = 0.78 n.a. PMID[451172]
NPT27 Others Unspecified PPB n.a. 62.94 % PMID[451173]
NPT27 Others Unspecified PPB n.a. 76.81 % PMID[451173]
NPT27 Others Unspecified PPB n.a. 84.9 % PMID[451173]
NPT35 Others n.a. pKa_B1 n.a. 7.53 n.a. PMID[451173]
NPT35 Others n.a. LogD7.4 n.a. 0.42 n.a. PMID[451173]
NPT35 Others n.a. pKa_A1 n.a. 2.26 n.a. PMID[451173]
NPT27 Others Unspecified CL < 3.0 uL.min-1.(10^6cells)-1 PMID[451173]
NPT27 Others Unspecified CL < 3.0 mL.min-1.g-1 PMID[451173]
NPT16 Organism Staphylococcus aureus Staphylococcus aureus MIC > 256.0 ug.mL-1 PMID[451174]
NPT5484 Protein Complex DNA gyrase Staphylococcus aureus IC50 > 500000.0 nM PMID[451174]
NPT2 Others Unspecified IC50 > 333000.0 nM PMID[451174]
NPT98 Individual Protein HERG Homo sapiens Ki = 23000.0 nM PMID[451175]
NPT35 Others n.a. Papp = 6.6 10'-6 cm/s PMID[451175]
NPT27 Others Unspecified Ratio = 46.0 n.a. PMID[451176]
NPT27 Others Unspecified Ratio = 0.6 n.a. PMID[451176]
NPT27 Others Unspecified Papp = 1.0 ucm/s PMID[451176]
NPT27 Others Unspecified Papp = 1.7 ucm/s PMID[451176]
NPT27 Others Unspecified Ratio = 2.0 n.a. PMID[451176]
NPT27 Others Unspecified Papp = 2.3 ucm/s PMID[451176]
NPT27 Others Unspecified Papp = 1.2 ucm/s PMID[451176]
NPT624 Tissue Plasma Mus musculus Ratio AUC = 4.6 n.a. PMID[451176]
NPT27 Others Unspecified Ratio = 70.0 n.a. PMID[451176]
NPT27 Others Unspecified Ratio = 57.0 n.a. PMID[451176]
NPT27 Others Unspecified Drug excretion = 23.0 % PMID[451178]
NPT27 Others Unspecified Drug excretion = 28.0 % PMID[451178]
NPT29 Organism Rattus norvegicus Rattus norvegicus CL = 42.11 mL.min-1.kg-1 PMID[451178]
NPT29 Organism Rattus norvegicus Rattus norvegicus CL = 8.0 mL.min-1.kg-1 PMID[451178]
NPT605 Organism Homo sapiens Homo sapiens CL = 4.0 mL.min-1.kg-1 PMID[451178]
NPT605 Organism Homo sapiens Homo sapiens CL = 1.4 mL.min-1.kg-1 PMID[451178]
NPT605 Organism Homo sapiens Homo sapiens DILI_severity_class = 0.0 n.a. PMID[451180]
NPT20555 ORGANISM SARS-CoV-2 Severe acute respiratory syndrome coronavirus 2 Hit score = 0.1118 n.a. PMID[451182]
NPT32 Organism Mus musculus Mus musculus Activity = 39.0 % PMID[451183]
NPT20555 ORGANISM SARS-CoV-2 Severe acute respiratory syndrome coronavirus 2 IC50 > 20000.0 nM PMID[451184]
NPT20555 ORGANISM SARS-CoV-2 Severe acute respiratory syndrome coronavirus 2 IC50 > 19952.62 nM PMID[451184]
NPT35 Others n.a. pKa = 4.7 n.a. PMID[451185]
NPT27 Others Unspecified Papp = 0.4 10^-6 cm/s PMID[451185]
NPT35 Others n.a. LogD = 0.3 n.a. PMID[451185]
NPT27 Others Unspecified Fu = 0.00301 n.a. PMID[451185]
NPT27 Others Unspecified Ratio = 0.915 n.a. PMID[451185]
NPT27 Others Unspecified Ratio = 0.804 n.a. PMID[451185]
NPT27 Others Unspecified CL = 6.0 mL.min-1.kg-1 PMID[451185]
NPT27 Others Unspecified CL = 1.3 mL.min-1.kg-1 PMID[451185]
NPT27 Others Unspecified Fu = 0.00421 n.a. PMID[451185]
NPT35 Others n.a. pKa = 9.3 n.a. PMID[451185]

☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

  Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC313663 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.791 Intermediate Similarity NPC285394
0.7846 Intermediate Similarity NPC212891
0.7746 Intermediate Similarity NPC316906
0.7717 Intermediate Similarity NPC292758
0.7717 Intermediate Similarity NPC158854
0.7717 Intermediate Similarity NPC65855
0.7664 Intermediate Similarity NPC65310
0.7656 Intermediate Similarity NPC475002
0.7656 Intermediate Similarity NPC95126
0.763 Intermediate Similarity NPC317474
0.763 Intermediate Similarity NPC213126
0.763 Intermediate Similarity NPC293831
0.763 Intermediate Similarity NPC169485
0.763 Intermediate Similarity NPC84281
0.763 Intermediate Similarity NPC369
0.763 Intermediate Similarity NPC291027
0.7597 Intermediate Similarity NPC471188
0.7519 Intermediate Similarity NPC45794
0.7481 Intermediate Similarity NPC234337
0.7481 Intermediate Similarity NPC133389
0.7481 Intermediate Similarity NPC183339
0.7444 Intermediate Similarity NPC105141
0.7444 Intermediate Similarity NPC242764
0.7424 Intermediate Similarity NPC221275
0.7391 Intermediate Similarity NPC473938
0.7376 Intermediate Similarity NPC69496
0.7357 Intermediate Similarity NPC470753
0.7357 Intermediate Similarity NPC253681
0.7357 Intermediate Similarity NPC473220
0.7344 Intermediate Similarity NPC94751
0.7344 Intermediate Similarity NPC142326
0.7325 Intermediate Similarity NPC476750
0.7312 Intermediate Similarity NPC476749
0.7305 Intermediate Similarity NPC51448
0.7305 Intermediate Similarity NPC115797
0.7286 Intermediate Similarity NPC470765
0.7286 Intermediate Similarity NPC275576
0.7279 Intermediate Similarity NPC150712
0.7267 Intermediate Similarity NPC328824
0.7266 Intermediate Similarity NPC85511
0.7266 Intermediate Similarity NPC77691
0.7248 Intermediate Similarity NPC473922
0.7246 Intermediate Similarity NPC167323
0.7246 Intermediate Similarity NPC269923
0.7241 Intermediate Similarity NPC475318
0.7241 Intermediate Similarity NPC474855
0.7241 Intermediate Similarity NPC9687
0.7241 Intermediate Similarity NPC118099
0.7241 Intermediate Similarity NPC49577
0.7241 Intermediate Similarity NPC151706
0.7241 Intermediate Similarity NPC475598
0.7241 Intermediate Similarity NPC293377
0.7241 Intermediate Similarity NPC260045
0.7241 Intermediate Similarity NPC474811
0.7241 Intermediate Similarity NPC90194
0.7241 Intermediate Similarity NPC474787
0.7241 Intermediate Similarity NPC476102
0.7241 Intermediate Similarity NPC273907
0.7241 Intermediate Similarity NPC79465
0.7241 Intermediate Similarity NPC76785
0.7234 Intermediate Similarity NPC199738
0.7234 Intermediate Similarity NPC210950
0.7234 Intermediate Similarity NPC169913
0.7226 Intermediate Similarity NPC190663
0.7222 Intermediate Similarity NPC233910
0.7222 Intermediate Similarity NPC245836
0.7214 Intermediate Similarity NPC474847
0.7214 Intermediate Similarity NPC4974
0.7206 Intermediate Similarity NPC254233
0.7203 Intermediate Similarity NPC183722
0.7194 Intermediate Similarity NPC273336
0.7194 Intermediate Similarity NPC182333
0.7192 Intermediate Similarity NPC478140
0.7192 Intermediate Similarity NPC471864
0.7171 Intermediate Similarity NPC94602
0.7152 Intermediate Similarity NPC475578
0.7132 Intermediate Similarity NPC471186
0.7123 Intermediate Similarity NPC475627
0.7123 Intermediate Similarity NPC18982
0.7123 Intermediate Similarity NPC475457
0.7123 Intermediate Similarity NPC473360
0.7123 Intermediate Similarity NPC475346
0.7123 Intermediate Similarity NPC203486
0.7122 Intermediate Similarity NPC160493
0.7113 Intermediate Similarity NPC5486
0.7109 Intermediate Similarity NPC19856
0.7103 Intermediate Similarity NPC244866
0.7097 Intermediate Similarity NPC275839
0.7095 Intermediate Similarity NPC153007
0.7095 Intermediate Similarity NPC262324
0.707 Intermediate Similarity NPC93343
0.7059 Intermediate Similarity NPC476757
0.7055 Intermediate Similarity NPC132847
0.705 Intermediate Similarity NPC472981
0.7029 Intermediate Similarity NPC472708
0.7027 Intermediate Similarity NPC472804
0.7023 Intermediate Similarity NPC27252
0.7023 Intermediate Similarity NPC472979
0.7021 Intermediate Similarity NPC307020
0.7007 Intermediate Similarity NPC48929
0.7007 Intermediate Similarity NPC126516
0.7 Intermediate Similarity NPC105899
0.7 Intermediate Similarity NPC26285
0.7 Intermediate Similarity NPC79921
0.6993 Remote Similarity NPC89923
0.6993 Remote Similarity NPC71933
0.6993 Remote Similarity NPC239990
0.6993 Remote Similarity NPC472556
0.6993 Remote Similarity NPC105114
0.6993 Remote Similarity NPC152850
0.6992 Remote Similarity NPC133308
0.698 Remote Similarity NPC249817
0.698 Remote Similarity NPC243893
0.6978 Remote Similarity NPC470585
0.6972 Remote Similarity NPC47667
0.697 Remote Similarity NPC159767
0.697 Remote Similarity NPC155506
0.6966 Remote Similarity NPC126859
0.6966 Remote Similarity NPC259665
0.6966 Remote Similarity NPC89769
0.6962 Remote Similarity NPC217801
0.6954 Remote Similarity NPC224491
0.6954 Remote Similarity NPC475128
0.6953 Remote Similarity NPC225079
0.6953 Remote Similarity NPC128248
0.6953 Remote Similarity NPC469481
0.6953 Remote Similarity NPC136810
0.6953 Remote Similarity NPC133809
0.695 Remote Similarity NPC472415
0.6944 Remote Similarity NPC472413
0.6944 Remote Similarity NPC40488
0.6944 Remote Similarity NPC116057
0.694 Remote Similarity NPC471189
0.694 Remote Similarity NPC66208
0.6939 Remote Similarity NPC90693
0.6939 Remote Similarity NPC64897
0.6933 Remote Similarity NPC22676
0.6933 Remote Similarity NPC198621
0.6933 Remote Similarity NPC475482
0.6933 Remote Similarity NPC239770
0.6933 Remote Similarity NPC216940
0.6928 Remote Similarity NPC475122
0.6923 Remote Similarity NPC137416
0.6923 Remote Similarity NPC136453
0.6918 Remote Similarity NPC42423
0.6918 Remote Similarity NPC257390
0.6918 Remote Similarity NPC246913
0.6914 Remote Similarity NPC253738
0.6913 Remote Similarity NPC279463
0.6913 Remote Similarity NPC281104
0.6913 Remote Similarity NPC477874
0.6913 Remote Similarity NPC472374
0.6913 Remote Similarity NPC173569
0.6913 Remote Similarity NPC472372
0.6912 Remote Similarity NPC186933
0.6906 Remote Similarity NPC42657
0.6901 Remote Similarity NPC307139
0.6899 Remote Similarity NPC304873
0.6894 Remote Similarity NPC472980
0.6894 Remote Similarity NPC249811
0.6892 Remote Similarity NPC329913
0.689 Remote Similarity NPC30171
0.6883 Remote Similarity NPC476973
0.6883 Remote Similarity NPC472571
0.6883 Remote Similarity NPC177940
0.6883 Remote Similarity NPC473088
0.6883 Remote Similarity NPC96903
0.6883 Remote Similarity NPC472572
0.6883 Remote Similarity NPC174982
0.6883 Remote Similarity NPC470157
0.6883 Remote Similarity NPC29704
0.6883 Remote Similarity NPC472575
0.6883 Remote Similarity NPC184817
0.6883 Remote Similarity NPC158663
0.6883 Remote Similarity NPC171525
0.6883 Remote Similarity NPC200471
0.6883 Remote Similarity NPC70403
0.6883 Remote Similarity NPC470159
0.6883 Remote Similarity NPC472568
0.6883 Remote Similarity NPC469349
0.6883 Remote Similarity NPC471104
0.6875 Remote Similarity NPC190849
0.6875 Remote Similarity NPC171007
0.687 Remote Similarity NPC243601
0.6863 Remote Similarity NPC163087
0.6863 Remote Similarity NPC477468
0.6863 Remote Similarity NPC91703
0.6861 Remote Similarity NPC9274
0.6859 Remote Similarity NPC266265
0.6859 Remote Similarity NPC92293
0.6859 Remote Similarity NPC270590
0.6859 Remote Similarity NPC301556
0.6859 Remote Similarity NPC471101
0.6857 Remote Similarity NPC478016
0.6857 Remote Similarity NPC80150
0.6857 Remote Similarity NPC478014
0.6857 Remote Similarity NPC172769
0.6857 Remote Similarity NPC166521
0.6857 Remote Similarity NPC184195
0.6857 Remote Similarity NPC281470

  Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC313663 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
1.0 High Similarity NPD7715 Approved
1.0 High Similarity NPD7714 Approved
0.9032 High Similarity NPD7725 Approved
0.8613 High Similarity NPD7702 Clinical (unspecified phase)
0.8309 Intermediate Similarity NPD5121 Approved
0.8309 Intermediate Similarity NPD5120 Approved
0.8309 Intermediate Similarity NPD5119 Approved
0.8284 Intermediate Similarity NPD4620 Approved
0.8284 Intermediate Similarity NPD5203 Approved
0.8284 Intermediate Similarity NPD5201 Approved
0.8284 Intermediate Similarity NPD4617 Approved
0.8102 Intermediate Similarity NPD7713 Phase 3
0.8077 Intermediate Similarity NPD6993 Approved
0.8077 Intermediate Similarity NPD6994 Approved
0.803 Intermediate Similarity NPD7437 Approved
0.803 Intermediate Similarity NPD7436 Approved
0.8015 Intermediate Similarity NPD5202 Clinical (unspecified phase)
0.7984 Intermediate Similarity NPD4574 Approved
0.7984 Intermediate Similarity NPD4576 Approved
0.791 Intermediate Similarity NPD5159 Phase 2
0.791 Intermediate Similarity NPD5158 Clinical (unspecified phase)
0.791 Intermediate Similarity NPD5157 Phase 1
0.7852 Intermediate Similarity NPD5667 Approved
0.784 Intermediate Similarity NPD4095 Clinical (unspecified phase)
0.7794 Intermediate Similarity NPD6565 Approved
0.7794 Intermediate Similarity NPD6564 Approved
0.7794 Intermediate Similarity NPD6563 Approved
0.7786 Intermediate Similarity NPD6309 Approved
0.7786 Intermediate Similarity NPD6310 Approved
0.7786 Intermediate Similarity NPD6311 Approved
0.7761 Intermediate Similarity NPD4806 Approved
0.7761 Intermediate Similarity NPD4807 Approved
0.7746 Intermediate Similarity NPD7231 Approved
0.7746 Intermediate Similarity NPD7230 Approved
0.7744 Intermediate Similarity NPD5305 Approved
0.7744 Intermediate Similarity NPD5306 Approved
0.7717 Intermediate Similarity NPD1756 Approved
0.7717 Intermediate Similarity NPD1752 Approved
0.7704 Intermediate Similarity NPD7250 Approved
0.7704 Intermediate Similarity NPD7249 Approved
0.7687 Intermediate Similarity NPD4136 Approved
0.7687 Intermediate Similarity NPD4106 Approved
0.7687 Intermediate Similarity NPD4135 Approved
0.7681 Intermediate Similarity NPD5204 Approved
0.7676 Intermediate Similarity NPD6817 Clinical (unspecified phase)
0.7664 Intermediate Similarity NPD2627 Approved
0.7664 Intermediate Similarity NPD2628 Approved
0.7664 Intermediate Similarity NPD2159 Approved
0.7664 Intermediate Similarity NPD2160 Approved
0.7664 Intermediate Similarity NPD2625 Approved
0.7664 Intermediate Similarity NPD2626 Approved
0.7661 Intermediate Similarity NPD4658 Approved
0.7661 Intermediate Similarity NPD4656 Approved
0.7656 Intermediate Similarity NPD4025 Clinical (unspecified phase)
0.763 Intermediate Similarity NPD4217 Approved
0.763 Intermediate Similarity NPD2610 Approved
0.763 Intermediate Similarity NPD3132 Approved
0.763 Intermediate Similarity NPD2608 Approved
0.763 Intermediate Similarity NPD3131 Approved
0.763 Intermediate Similarity NPD4216 Approved
0.763 Intermediate Similarity NPD2612 Approved
0.763 Intermediate Similarity NPD2611 Approved
0.763 Intermediate Similarity NPD4215 Approved
0.763 Intermediate Similarity NPD4218 Approved
0.763 Intermediate Similarity NPD5351 Clinical (unspecified phase)
0.763 Intermediate Similarity NPD2609 Approved
0.763 Intermediate Similarity NPD5350 Clinical (unspecified phase)
0.7552 Intermediate Similarity NPD3528 Clinical (unspecified phase)
0.7551 Intermediate Similarity NPD7488 Clinical (unspecified phase)
0.7537 Intermediate Similarity NPD4102 Approved
0.7537 Intermediate Similarity NPD4105 Approved
0.752 Intermediate Similarity NPD4231 Approved
0.752 Intermediate Similarity NPD4229 Approved
0.7518 Intermediate Similarity NPD4621 Approved
0.7518 Intermediate Similarity NPD4619 Approved
0.75 Intermediate Similarity NPD7910 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD6591 Clinical (unspecified phase)
0.7448 Intermediate Similarity NPD3648 Clinical (unspecified phase)
0.7442 Intermediate Similarity NPD3646 Clinical (unspecified phase)
0.744 Intermediate Similarity NPD4818 Approved
0.744 Intermediate Similarity NPD4817 Approved
0.7429 Intermediate Similarity NPD3663 Approved
0.7429 Intermediate Similarity NPD3664 Approved
0.7429 Intermediate Similarity NPD3662 Phase 3
0.7429 Intermediate Similarity NPD3661 Approved
0.7413 Intermediate Similarity NPD6346 Approved
0.7391 Intermediate Similarity NPD1755 Approved
0.7385 Intermediate Similarity NPD4253 Approved
0.7385 Intermediate Similarity NPD4254 Approved
0.7385 Intermediate Similarity NPD2201 Approved
0.7376 Intermediate Similarity NPD2613 Approved
0.7357 Intermediate Similarity NPD4980 Approved
0.7344 Intermediate Similarity NPD5704 Approved
0.7344 Intermediate Similarity NPD5706 Approved
0.7344 Intermediate Similarity NPD5705 Approved
0.7343 Intermediate Similarity NPD7086 Phase 2
0.7315 Intermediate Similarity NPD2575 Approved
0.7313 Intermediate Similarity NPD6775 Clinical (unspecified phase)
0.7308 Intermediate Similarity NPD5240 Approved
0.7308 Intermediate Similarity NPD5237 Approved
0.7308 Intermediate Similarity NPD5236 Approved
0.7308 Intermediate Similarity NPD5235 Approved
0.7308 Intermediate Similarity NPD5239 Approved
0.7302 Intermediate Similarity NPD4719 Phase 2
0.7293 Intermediate Similarity NPD2629 Approved
0.7293 Intermediate Similarity NPD5951 Approved
0.7255 Intermediate Similarity NPD7427 Discontinued
0.7244 Intermediate Similarity NPD3683 Approved
0.7244 Intermediate Similarity NPD3681 Approved
0.7226 Intermediate Similarity NPD7163 Clinical (unspecified phase)
0.7226 Intermediate Similarity NPD5238 Clinical (unspecified phase)
0.7222 Intermediate Similarity NPD2570 Approved
0.7222 Intermediate Similarity NPD4745 Approved
0.7222 Intermediate Similarity NPD3614 Approved
0.7222 Intermediate Similarity NPD3090 Approved
0.7222 Intermediate Similarity NPD3087 Approved
0.7222 Intermediate Similarity NPD2566 Approved
0.7222 Intermediate Similarity NPD3615 Approved
0.7222 Intermediate Similarity NPD2574 Discontinued
0.7222 Intermediate Similarity NPD2571 Approved
0.7222 Intermediate Similarity NPD3089 Approved
0.7222 Intermediate Similarity NPD2572 Clinical (unspecified phase)
0.7222 Intermediate Similarity NPD3088 Approved
0.7222 Intermediate Similarity NPD3616 Approved
0.7222 Intermediate Similarity NPD4746 Phase 3
0.7222 Intermediate Similarity NPD2573 Approved
0.7203 Intermediate Similarity NPD7008 Discontinued
0.7203 Intermediate Similarity NPD6039 Approved
0.717 Intermediate Similarity NPD8005 Clinical (unspecified phase)
0.7152 Intermediate Similarity NPD8323 Discontinued
0.7143 Intermediate Similarity NPD2607 Approved
0.7134 Intermediate Similarity NPD7577 Discontinued
0.7124 Intermediate Similarity NPD8389 Clinical (unspecified phase)
0.7123 Intermediate Similarity NPD4686 Approved
0.7123 Intermediate Similarity NPD4685 Phase 3
0.7123 Intermediate Similarity NPD4684 Phase 3
0.7109 Intermediate Similarity NPD3680 Approved
0.7109 Intermediate Similarity NPD3682 Approved
0.7099 Intermediate Similarity NPD4720 Approved
0.7099 Intermediate Similarity NPD4718 Approved
0.7099 Intermediate Similarity NPD4717 Approved
0.709 Intermediate Similarity NPD2652 Approved
0.709 Intermediate Similarity NPD2650 Approved
0.7083 Intermediate Similarity NPD4497 Clinical (unspecified phase)
0.7077 Intermediate Similarity NPD3524 Approved
0.7077 Intermediate Similarity NPD3526 Approved
0.7059 Intermediate Similarity NPD8165 Discontinued
0.7055 Intermediate Similarity NPD4453 Approved
0.7055 Intermediate Similarity NPD4445 Approved
0.7055 Intermediate Similarity NPD4452 Approved
0.7055 Intermediate Similarity NPD8051 Clinical (unspecified phase)
0.7047 Intermediate Similarity NPD6897 Clinical (unspecified phase)
0.7047 Intermediate Similarity NPD4172 Approved
0.7047 Intermediate Similarity NPD7939 Discontinued
0.7047 Intermediate Similarity NPD4173 Approved
0.7042 Intermediate Similarity NPD4104 Clinical (unspecified phase)
0.7042 Intermediate Similarity NPD4103 Phase 2
0.7037 Intermediate Similarity NPD4766 Approved
0.7031 Intermediate Similarity NPD6027 Approved
0.7031 Intermediate Similarity NPD6024 Approved
0.7029 Intermediate Similarity NPD5981 Approved
0.7021 Intermediate Similarity NPD4659 Approved
0.7021 Intermediate Similarity NPD6025 Phase 1
0.7012 Intermediate Similarity NPD7997 Clinical (unspecified phase)
0.7007 Intermediate Similarity NPD7522 Discontinued
0.7006 Intermediate Similarity NPD7463 Clinical (unspecified phase)
0.6993 Remote Similarity NPD6884 Clinical (unspecified phase)
0.6992 Remote Similarity NPD5927 Discontinued
0.6985 Remote Similarity NPD4198 Discontinued
0.6978 Remote Similarity NPD5723 Approved
0.6972 Remote Similarity NPD5578 Approved
0.6972 Remote Similarity NPD5577 Clinical (unspecified phase)
0.6972 Remote Similarity NPD7258 Clinical (unspecified phase)
0.6966 Remote Similarity NPD5454 Clinical (unspecified phase)
0.6966 Remote Similarity NPD5155 Approved
0.6966 Remote Similarity NPD5952 Clinical (unspecified phase)
0.6966 Remote Similarity NPD5156 Approved
0.6963 Remote Similarity NPD1373 Approved
0.6963 Remote Similarity NPD1374 Approved
0.6963 Remote Similarity NPD1371 Approved
0.6963 Remote Similarity NPD1370 Approved
0.6963 Remote Similarity NPD3598 Phase 3
0.6957 Remote Similarity NPD2227 Clinical (unspecified phase)
0.6939 Remote Similarity NPD5182 Approved
0.6939 Remote Similarity NPD5185 Approved
0.6939 Remote Similarity NPD5184 Approved
0.6935 Remote Similarity NPD1088 Approved
0.6928 Remote Similarity NPD7740 Clinical (unspecified phase)
0.6918 Remote Similarity NPD7011 Discontinued
0.6917 Remote Similarity NPD4233 Approved
0.6917 Remote Similarity NPD4234 Approved
0.6913 Remote Similarity NPD7718 Clinical (unspecified phase)
0.6913 Remote Similarity NPD8147 Approved
0.6913 Remote Similarity NPD8148 Approved
0.6913 Remote Similarity NPD2569 Approved
0.6913 Remote Similarity NPD2567 Approved
0.6906 Remote Similarity NPD1710 Approved
0.6899 Remote Similarity NPD855 Approved
0.6899 Remote Similarity NPD854 Approved
0.6897 Remote Similarity NPD2605 Approved

  Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data