Natural Product: NPC302987

Natural Product ID:  NPC302987
Common Name:   Ceramicine F
IUPAC Name:   (4R,5S,6R,7S,8R,9S,10R,13S,17R)-17-(furan-3-yl)-6,7-dihydroxy-4,8,10,13-tetramethyl-1-oxo-5,6,7,9,11,12,16,17-octahydrocyclopenta[a]phenanthrene-4-carbaldehyde
Synonyms:   Ceramicine F
Molecular Formula:   C26H32O5
Standard InCHIKey:  FMPMGORTBBATND-RTBHCFDSSA-N
Standard InCHI:  InChI=1S/C26H32O5/c1-23(14-27)10-8-19(28)26(4)18-7-11-24(2)16(15-9-12-31-13-15)5-6-17(24)25(18,3)22(30)20(29)21(23)26/h6,8-10,12-14,16,18,20-22,29-30H,5,7,11H2,1-4H3/t16-,18-,20+,21-,22+,23-,24-,25-,26-/m0/s1
Canonical SMILES:  O=C[C@]1(C)C=CC(=O)[C@]2([C@H]1[C@@H](O)[C@@H](O)[C@@]1([C@@H]2CC[C@@]2(C1=CC[C@H]2c1ccoc1)C)C)C
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO5587 Chisocheton ceramicus Species Meliaceae Eukaryota PMID[23395661]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT2 Others Unspecified CC50 = 25000 nM 10.1016/j.cropro.2006.02.001
NPT2 Others Unspecified Ratio CC50/IC50 = 1.1 DrugMatrix in vivo data: Pathology
NPT2 Others Unspecified IC50 = 22400 nM Open TG-GATES in vivo data: Organ Weight

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC302987 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9714 High Similarity NPC185456
0.958 High Similarity NPC234494
0.958 High Similarity NPC470998
0.9521 High Similarity NPC92979
0.9517 High Similarity NPC470996
0.9514 High Similarity NPC196846
0.9514 High Similarity NPC470997
0.9384 High Similarity NPC33938
0.9257 High Similarity NPC296807
0.9257 High Similarity NPC155939
0.9257 High Similarity NPC141538
0.9231 High Similarity NPC199044
0.9231 High Similarity NPC238843
0.9184 High Similarity NPC272590
0.9172 High Similarity NPC471174
0.9103 High Similarity NPC470999
0.9103 High Similarity NPC471292
0.9085 High Similarity NPC56197
0.9041 High Similarity NPC216755
0.9007 High Similarity NPC197137
0.9 High Similarity NPC476947
0.8993 High Similarity NPC218838
0.898 High Similarity NPC471007
0.8919 High Similarity NPC471001
0.8867 High Similarity NPC246164
0.8828 High Similarity NPC52412
0.88 High Similarity NPC471000
0.8792 High Similarity NPC472654
0.8776 High Similarity NPC5676
0.8767 High Similarity NPC476946
0.8714 High Similarity NPC61788
0.871 High Similarity NPC470792
0.869 High Similarity NPC67003
0.8684 High Similarity NPC237259
0.8684 High Similarity NPC302054
0.8684 High Similarity NPC34421
0.8684 High Similarity NPC253201
0.8684 High Similarity NPC98206
0.8684 High Similarity NPC178932
0.8675 High Similarity NPC291150
0.8675 High Similarity NPC116717
0.8654 High Similarity NPC663
0.8654 High Similarity NPC224394
0.8649 High Similarity NPC34056
0.8639 High Similarity NPC243577
0.863 High Similarity NPC205765
0.8627 High Similarity NPC469336
0.8627 High Similarity NPC25351
0.8627 High Similarity NPC264943
0.8618 High Similarity NPC472672
0.8618 High Similarity NPC121615
0.8618 High Similarity NPC471002
0.8618 High Similarity NPC294511
0.8609 High Similarity NPC5180
0.8599 High Similarity NPC276551
0.8592 High Similarity NPC471006
0.859 High Similarity NPC69028
0.8581 High Similarity NPC84349
0.8544 High Similarity NPC470875
0.8543 High Similarity NPC125182
0.8543 High Similarity NPC69647
0.8535 High Similarity NPC292389
0.8535 High Similarity NPC469338
0.8535 High Similarity NPC472773
0.8516 High Similarity NPC470118
0.8516 High Similarity NPC469847
0.8506 High Similarity NPC281258
0.85 High Similarity NPC470995
0.8481 Intermediate Similarity NPC470940
0.8481 Intermediate Similarity NPC469849
0.8471 Intermediate Similarity NPC18986
0.8471 Intermediate Similarity NPC472771
0.8462 Intermediate Similarity NPC472823
0.8462 Intermediate Similarity NPC472671
0.8462 Intermediate Similarity NPC475226
0.8456 Intermediate Similarity NPC476944
0.8456 Intermediate Similarity NPC251865
0.8447 Intermediate Similarity NPC285227
0.8446 Intermediate Similarity NPC121158
0.8438 Intermediate Similarity NPC471397
0.8435 Intermediate Similarity NPC90296
0.8418 Intermediate Similarity NPC283209
0.8418 Intermediate Similarity NPC477405
0.8414 Intermediate Similarity NPC46896
0.8411 Intermediate Similarity NPC255414
0.8408 Intermediate Similarity NPC287559
0.8408 Intermediate Similarity NPC477402
0.8408 Intermediate Similarity NPC470789
0.8397 Intermediate Similarity NPC475066
0.8397 Intermediate Similarity NPC472772
0.8397 Intermediate Similarity NPC214495
0.8397 Intermediate Similarity NPC472777
0.8397 Intermediate Similarity NPC470119
0.8397 Intermediate Similarity NPC472776
0.8397 Intermediate Similarity NPC472778
0.8397 Intermediate Similarity NPC194499
0.8389 Intermediate Similarity NPC267632
0.8387 Intermediate Similarity NPC35000
0.8377 Intermediate Similarity NPC268905
0.8377 Intermediate Similarity NPC469503
0.8377 Intermediate Similarity NPC75906
0.8375 Intermediate Similarity NPC472774
0.8375 Intermediate Similarity NPC173516
0.8375 Intermediate Similarity NPC472775
0.8366 Intermediate Similarity NPC469335
0.8366 Intermediate Similarity NPC156189
0.8366 Intermediate Similarity NPC159927
0.8366 Intermediate Similarity NPC228842
0.8357 Intermediate Similarity NPC23086
0.8356 Intermediate Similarity NPC4764
0.8355 Intermediate Similarity NPC93666
0.8354 Intermediate Similarity NPC68848
0.8354 Intermediate Similarity NPC5741
0.8354 Intermediate Similarity NPC471003
0.8354 Intermediate Similarity NPC329938
0.8354 Intermediate Similarity NPC263432
0.8345 Intermediate Similarity NPC158525
0.8344 Intermediate Similarity NPC307383
0.8344 Intermediate Similarity NPC346
0.8344 Intermediate Similarity NPC475967
0.8333 Intermediate Similarity NPC142113
0.8323 Intermediate Similarity NPC30222
0.8323 Intermediate Similarity NPC472765
0.8323 Intermediate Similarity NPC472766
0.8322 Intermediate Similarity NPC263337
0.8313 Intermediate Similarity NPC475779
0.8313 Intermediate Similarity NPC121995
0.8302 Intermediate Similarity NPC285567
0.8301 Intermediate Similarity NPC195325
0.8299 Intermediate Similarity NPC471996
0.8289 Intermediate Similarity NPC71821
0.828 Intermediate Similarity NPC304692
0.828 Intermediate Similarity NPC299038
0.828 Intermediate Similarity NPC88007
0.828 Intermediate Similarity NPC7059
0.8269 Intermediate Similarity NPC214541
0.8269 Intermediate Similarity NPC44675
0.8264 Intermediate Similarity NPC471995
0.8261 Intermediate Similarity NPC472282
0.8261 Intermediate Similarity NPC472764
0.8261 Intermediate Similarity NPC476850
0.8261 Intermediate Similarity NPC476861
0.825 Intermediate Similarity NPC476858
0.825 Intermediate Similarity NPC476857
0.825 Intermediate Similarity NPC123088
0.825 Intermediate Similarity NPC476856
0.8247 Intermediate Similarity NPC196864
0.8247 Intermediate Similarity NPC212257
0.8247 Intermediate Similarity NPC477404
0.8243 Intermediate Similarity NPC202260
0.8243 Intermediate Similarity NPC90953
0.8242 Intermediate Similarity NPC478177
0.8239 Intermediate Similarity NPC5079
0.8239 Intermediate Similarity NPC197596
0.8239 Intermediate Similarity NPC79571
0.8239 Intermediate Similarity NPC200782
0.8239 Intermediate Similarity NPC472767
0.8232 Intermediate Similarity NPC471437
0.8228 Intermediate Similarity NPC477403
0.8224 Intermediate Similarity NPC262198
0.8217 Intermediate Similarity NPC41880
0.8217 Intermediate Similarity NPC104736
0.8217 Intermediate Similarity NPC469485
0.8214 Intermediate Similarity NPC242068
0.8214 Intermediate Similarity NPC247563
0.821 Intermediate Similarity NPC160651
0.8205 Intermediate Similarity NPC57998
0.8201 Intermediate Similarity NPC477967
0.8199 Intermediate Similarity NPC307781
0.8199 Intermediate Similarity NPC472670
0.8194 Intermediate Similarity NPC472787
0.8194 Intermediate Similarity NPC298190
0.8194 Intermediate Similarity NPC89133
0.8187 Intermediate Similarity NPC234660
0.8187 Intermediate Similarity NPC165218
0.8187 Intermediate Similarity NPC51568
0.8182 Intermediate Similarity NPC470791
0.8182 Intermediate Similarity NPC470790
0.8176 Intermediate Similarity NPC476943
0.8176 Intermediate Similarity NPC25255
0.8176 Intermediate Similarity NPC8389
0.817 Intermediate Similarity NPC250228
0.8165 Intermediate Similarity NPC472283
0.8165 Intermediate Similarity NPC261597
0.8165 Intermediate Similarity NPC195954
0.8165 Intermediate Similarity NPC173544
0.8165 Intermediate Similarity NPC167142
0.8158 Intermediate Similarity NPC56731
0.8153 Intermediate Similarity NPC469850
0.8153 Intermediate Similarity NPC179170
0.8148 Intermediate Similarity NPC476853
0.8148 Intermediate Similarity NPC478179
0.8148 Intermediate Similarity NPC310572
0.8148 Intermediate Similarity NPC472651
0.8146 Intermediate Similarity NPC103134
0.8141 Intermediate Similarity NPC182427
0.8141 Intermediate Similarity NPC29695
0.8141 Intermediate Similarity NPC308205
0.8141 Intermediate Similarity NPC322546
0.8138 Intermediate Similarity NPC471817

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC302987 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8506 High Similarity NPD5760 Phase 2
0.8506 High Similarity NPD5761 Phase 2
0.7857 Intermediate Similarity NPD6765 Approved
0.7857 Intermediate Similarity NPD6764 Approved
0.7836 Intermediate Similarity NPD8434 Phase 2
0.7674 Intermediate Similarity NPD6784 Approved
0.7674 Intermediate Similarity NPD6785 Approved
0.7419 Intermediate Similarity NPD1471 Phase 3
0.741 Intermediate Similarity NPD5537 Clinical (unspecified phase)
0.7389 Intermediate Similarity NPD4628 Phase 3
0.7375 Intermediate Similarity NPD6273 Approved
0.7308 Intermediate Similarity NPD2343 Clinical (unspecified phase)
0.7118 Intermediate Similarity NPD8127 Discontinued
0.7107 Intermediate Similarity NPD7421 Clinical (unspecified phase)
0.7089 Intermediate Similarity NPD2344 Approved
0.7081 Intermediate Similarity NPD7236 Approved
0.703 Intermediate Similarity NPD7458 Discontinued
0.6988 Remote Similarity NPD7028 Phase 2
0.6987 Remote Similarity NPD5735 Approved
0.6962 Remote Similarity NPD2799 Discontinued
0.6933 Remote Similarity NPD3972 Approved
0.6923 Remote Similarity NPD8443 Clinical (unspecified phase)
0.6914 Remote Similarity NPD2309 Approved
0.6889 Remote Similarity NPD8055 Clinical (unspecified phase)
0.6879 Remote Similarity NPD6355 Discontinued
0.6875 Remote Similarity NPD2346 Discontinued
0.6867 Remote Similarity NPD7239 Suspended
0.6864 Remote Similarity NPD7096 Clinical (unspecified phase)
0.6864 Remote Similarity NPD7819 Suspended
0.6864 Remote Similarity NPD2393 Clinical (unspecified phase)
0.686 Remote Similarity NPD5494 Approved
0.6859 Remote Similarity NPD8032 Phase 2
0.6854 Remote Similarity NPD6559 Discontinued
0.6852 Remote Similarity NPD8166 Discontinued
0.6846 Remote Similarity NPD3412 Clinical (unspecified phase)
0.6842 Remote Similarity NPD1876 Approved
0.6826 Remote Similarity NPD5808 Clinical (unspecified phase)
0.6826 Remote Similarity NPD3226 Approved
0.6824 Remote Similarity NPD5616 Clinical (unspecified phase)
0.6815 Remote Similarity NPD4140 Approved
0.6795 Remote Similarity NPD3268 Approved
0.6788 Remote Similarity NPD7004 Clinical (unspecified phase)
0.6786 Remote Similarity NPD6599 Discontinued
0.6784 Remote Similarity NPD3882 Suspended
0.677 Remote Similarity NPD5763 Approved
0.677 Remote Similarity NPD5762 Approved
0.6748 Remote Similarity NPD4109 Clinical (unspecified phase)
0.6748 Remote Similarity NPD4110 Phase 3
0.6748 Remote Similarity NPD7003 Approved
0.6744 Remote Similarity NPD7075 Discontinued
0.673 Remote Similarity NPD6353 Approved
0.6724 Remote Similarity NPD7199 Phase 2
0.6724 Remote Similarity NPD1247 Approved
0.6723 Remote Similarity NPD3818 Discontinued
0.6723 Remote Similarity NPD7893 Clinical (unspecified phase)
0.6717 Remote Similarity NPD8404 Phase 2
0.671 Remote Similarity NPD9494 Approved
0.6708 Remote Similarity NPD6100 Approved
0.6708 Remote Similarity NPD6099 Approved
0.6708 Remote Similarity NPD2796 Approved
0.6706 Remote Similarity NPD1934 Approved
0.6688 Remote Similarity NPD2313 Discontinued
0.6686 Remote Similarity NPD4380 Phase 2
0.6685 Remote Similarity NPD5844 Phase 1
0.6667 Remote Similarity NPD5327 Phase 3
0.6649 Remote Similarity NPD3057 Approved
0.6647 Remote Similarity NPD7411 Suspended
0.6646 Remote Similarity NPD6398 Clinical (unspecified phase)
0.6645 Remote Similarity NPD2798 Approved
0.6645 Remote Similarity NPD1547 Clinical (unspecified phase)
0.6627 Remote Similarity NPD2651 Approved
0.6627 Remote Similarity NPD2649 Approved
0.6626 Remote Similarity NPD2424 Discontinued
0.6626 Remote Similarity NPD1549 Phase 2
0.661 Remote Similarity NPD4575 Clinical (unspecified phase)
0.6608 Remote Similarity NPD6801 Discontinued
0.6607 Remote Similarity NPD920 Approved
0.6599 Remote Similarity NPD1241 Discontinued
0.6591 Remote Similarity NPD6808 Phase 2
0.659 Remote Similarity NPD4868 Clinical (unspecified phase)
0.6587 Remote Similarity NPD4378 Clinical (unspecified phase)
0.6585 Remote Similarity NPD2800 Approved
0.6582 Remote Similarity NPD6798 Discontinued
0.6581 Remote Similarity NPD3266 Approved
0.6581 Remote Similarity NPD3267 Approved
0.6579 Remote Similarity NPD7457 Clinical (unspecified phase)
0.657 Remote Similarity NPD2801 Approved
0.6564 Remote Similarity NPD1550 Clinical (unspecified phase)
0.6564 Remote Similarity NPD1552 Clinical (unspecified phase)
0.6562 Remote Similarity NPD2491 Approved
0.6562 Remote Similarity NPD2972 Approved
0.6562 Remote Similarity NPD3533 Approved
0.6554 Remote Similarity NPD7184 Clinical (unspecified phase)
0.6552 Remote Similarity NPD3749 Approved
0.6552 Remote Similarity NPD4381 Clinical (unspecified phase)
0.6545 Remote Similarity NPD3750 Approved
0.6541 Remote Similarity NPD6663 Approved
0.6538 Remote Similarity NPD5647 Approved
0.6536 Remote Similarity NPD2163 Approved
0.6536 Remote Similarity NPD7799 Discontinued
0.6527 Remote Similarity NPD6143 Clinical (unspecified phase)
0.6527 Remote Similarity NPD6799 Approved
0.6519 Remote Similarity NPD7095 Approved
0.6519 Remote Similarity NPD5952 Clinical (unspecified phase)
0.6517 Remote Similarity NPD6168 Clinical (unspecified phase)
0.6517 Remote Similarity NPD6166 Phase 2
0.6517 Remote Similarity NPD6167 Clinical (unspecified phase)
0.6514 Remote Similarity NPD919 Approved
0.6513 Remote Similarity NPD2932 Approved
0.6512 Remote Similarity NPD6279 Approved
0.6512 Remote Similarity NPD6280 Approved
0.6512 Remote Similarity NPD6844 Discontinued
0.651 Remote Similarity NPD7157 Approved
0.6503 Remote Similarity NPD8312 Approved
0.6503 Remote Similarity NPD8313 Approved
0.65 Remote Similarity NPD3619 Clinical (unspecified phase)
0.65 Remote Similarity NPD3620 Phase 2
0.6494 Remote Similarity NPD7057 Phase 3
0.6494 Remote Similarity NPD4965 Approved
0.6494 Remote Similarity NPD4967 Phase 2
0.6494 Remote Similarity NPD7058 Phase 2
0.6494 Remote Similarity NPD4966 Approved
0.6494 Remote Similarity NPD1608 Approved
0.6488 Remote Similarity NPD642 Clinical (unspecified phase)
0.6484 Remote Similarity NPD7685 Pre-registration
0.648 Remote Similarity NPD7473 Discontinued
0.6477 Remote Similarity NPD3448 Approved
0.6474 Remote Similarity NPD2797 Approved
0.6467 Remote Similarity NPD643 Clinical (unspecified phase)
0.6464 Remote Similarity NPD7074 Phase 3
0.6463 Remote Similarity NPD6004 Phase 3
0.6463 Remote Similarity NPD6006 Clinical (unspecified phase)
0.6463 Remote Similarity NPD6002 Phase 3
0.6463 Remote Similarity NPD6005 Phase 3
0.6463 Remote Similarity NPD6003 Clinical (unspecified phase)
0.6461 Remote Similarity NPD3926 Phase 2
0.6456 Remote Similarity NPD6832 Phase 2
0.6443 Remote Similarity NPD7497 Discontinued
0.6442 Remote Similarity NPD3748 Approved
0.6442 Remote Similarity NPD1510 Phase 2
0.6442 Remote Similarity NPD4308 Phase 3
0.6441 Remote Similarity NPD6959 Discontinued
0.6437 Remote Similarity NPD2296 Approved
0.6437 Remote Similarity NPD5978 Approved
0.6437 Remote Similarity NPD3817 Phase 2
0.6437 Remote Similarity NPD5977 Approved
0.6429 Remote Similarity NPD1511 Approved
0.6425 Remote Similarity NPD7852 Clinical (unspecified phase)
0.6424 Remote Similarity NPD9092 Discovery
0.642 Remote Similarity NPD6653 Approved
0.642 Remote Similarity NPD6234 Discontinued
0.6417 Remote Similarity NPD8397 Clinical (unspecified phase)
0.6416 Remote Similarity NPD37 Approved
0.6416 Remote Similarity NPD7577 Discontinued
0.641 Remote Similarity NPD8651 Approved
0.641 Remote Similarity NPD1283 Approved
0.6409 Remote Similarity NPD7054 Approved
0.6409 Remote Similarity NPD7804 Clinical (unspecified phase)
0.6407 Remote Similarity NPD3887 Approved
0.6407 Remote Similarity NPD2354 Approved
0.6405 Remote Similarity NPD3019 Approved
0.6402 Remote Similarity NPD2935 Discontinued
0.6398 Remote Similarity NPD4060 Phase 1
0.6392 Remote Similarity NPD5736 Approved
0.6391 Remote Similarity NPD2532 Approved
0.6391 Remote Similarity NPD4661 Approved
0.6391 Remote Similarity NPD2534 Approved
0.6391 Remote Similarity NPD4662 Approved
0.6391 Remote Similarity NPD7410 Clinical (unspecified phase)
0.6391 Remote Similarity NPD2533 Approved
0.6382 Remote Similarity NPD5676 Approved
0.638 Remote Similarity NPD7097 Phase 1
0.6375 Remote Similarity NPD3764 Approved
0.6375 Remote Similarity NPD6859 Clinical (unspecified phase)
0.6374 Remote Similarity NPD7472 Approved
0.6373 Remote Similarity NPD4107 Approved
0.6358 Remote Similarity NPD6677 Suspended
0.6354 Remote Similarity NPD7228 Approved
0.6354 Remote Similarity NPD3751 Discontinued
0.6353 Remote Similarity NPD1512 Approved
0.6351 Remote Similarity NPD1609 Clinical (unspecified phase)
0.6349 Remote Similarity NPD7879 Clinical (unspecified phase)
0.6343 Remote Similarity NPD5402 Approved
0.6341 Remote Similarity NPD7033 Discontinued
0.634 Remote Similarity NPD1651 Approved
0.6339 Remote Similarity NPD7993 Clinical (unspecified phase)
0.6339 Remote Similarity NPD3823 Discontinued
0.6335 Remote Similarity NPD6233 Phase 2
0.6329 Remote Similarity NPD4624 Approved
0.6325 Remote Similarity NPD4534 Discontinued
0.6319 Remote Similarity NPD1607 Approved
0.6316 Remote Similarity NPD6980 Clinical (unspecified phase)
0.6316 Remote Similarity NPD5403 Approved
0.6313 Remote Similarity NPD7229 Phase 3
0.6313 Remote Similarity NPD6232 Discontinued
0.631 Remote Similarity NPD8150 Discontinued
0.6307 Remote Similarity NPD7768 Phase 2
0.6304 Remote Similarity NPD7251 Discontinued
0.6303 Remote Similarity NPD1551 Phase 2
0.6303 Remote Similarity NPD2438 Suspended

Structure

External Identifiers

PubChem CID   51041020
ChEMBL   CHEMBL2335024
ZINC  

Physicochemical Properties

Molecular Weight:  424.22
ALogP:  0.0781
MLogP:  3.77
XLogP:  2.963
# Rotatable Bonds:  8
Polar Surface Area:  87.74
# H-Bond Aceptor:  4
# H-Bond Donor:  2
# Rings:  5
# Heavy Atoms:  31

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
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Biological Activities  
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