Natural Product: NPC469850

Natural Product ID:  NPC469850
Common Name:   Cipadesin O
IUPAC Name:  
Synonyms:   Cipadesin O
Molecular Formula:   C32H40O9
Standard InCHIKey:  TVTLDMQYMFTWRY-VSMKCZCLSA-N
Standard InCHI:  InChI=1S/C32H40O9/c1-8-16(2)28(36)40-26-23-24(35)31(6,19(29(26,3)4)13-21(33)37-7)18-9-11-30(5)20(32(18)27(23)41-32)14-22(34)39-25(30)17-10-12-38-15-17/h9-10,12,15-16,19-20,23,25-27H,8,11,13-14H2,1-7H3/t16?,19-,20+,23+,25-,26+,27+,30+,31+,32+/m0/s1
Canonical SMILES:  COC(=O)C[C@H]1C(C)(C)[C@H](OC(=O)C(CC)C)[C@H]2C(=O)[C@]1(C)C1=CC[C@@]3([C@H]([C@]41[C@@H]2O4)CC(=O)O[C@H]3c1ccoc1)C
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO14263 Cipadessa baccifera Species Meliaceae Eukaryota Leaves PMID[20666364]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT659 Cell Line SMMC-7721 Homo sapiens IC50 > 40000 nM 27019296
NPT116 Cell Line HL-60 Homo sapiens IC50 > 40000 nM 27019296
NPT81 Cell Line A549 Homo sapiens IC50 > 40000 nM 27019296
NPT660 Cell Line SW480 Homo sapiens IC50 > 40000 nM 27019296
NPT83 Cell Line MCF7 Homo sapiens IC50 > 40000 nM 21049906

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC469850 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9726 High Similarity NPC469335
0.9726 High Similarity NPC159927
0.9592 High Similarity NPC196864
0.9592 High Similarity NPC477404
0.9477 High Similarity NPC476197
0.947 High Similarity NPC286722
0.947 High Similarity NPC472283
0.9467 High Similarity NPC469336
0.9412 High Similarity NPC470939
0.9408 High Similarity NPC473473
0.9408 High Similarity NPC475295
0.9404 High Similarity NPC209364
0.9404 High Similarity NPC60973
0.94 High Similarity NPC178932
0.9342 High Similarity NPC167142
0.9329 High Similarity NPC476122
0.9295 High Similarity NPC472282
0.9295 High Similarity NPC473753
0.9295 High Similarity NPC473766
0.9295 High Similarity NPC173516
0.929 High Similarity NPC469849
0.9281 High Similarity NPC237155
0.9276 High Similarity NPC107646
0.9257 High Similarity NPC221809
0.9236 High Similarity NPC160651
0.9236 High Similarity NPC471397
0.9231 High Similarity NPC470875
0.9226 High Similarity NPC469338
0.9226 High Similarity NPC292389
0.9221 High Similarity NPC305016
0.9221 High Similarity NPC25255
0.9221 High Similarity NPC475381
0.9216 High Similarity NPC472772
0.9211 High Similarity NPC476262
0.9211 High Similarity NPC264943
0.9205 High Similarity NPC476201
0.9205 High Similarity NPC469503
0.9184 High Similarity NPC142113
0.9167 High Similarity NPC470940
0.9167 High Similarity NPC476857
0.9167 High Similarity NPC476858
0.9167 High Similarity NPC476856
0.9167 High Similarity NPC276551
0.9161 High Similarity NPC193798
0.9161 High Similarity NPC5079
0.9161 High Similarity NPC69028
0.915 High Similarity NPC126723
0.915 High Similarity NPC263265
0.9145 High Similarity NPC282445
0.9139 High Similarity NPC18135
0.9128 High Similarity NPC470941
0.9103 High Similarity NPC477405
0.9103 High Similarity NPC469846
0.9103 High Similarity NPC51568
0.9103 High Similarity NPC234660
0.9097 High Similarity NPC472653
0.9091 High Similarity NPC249021
0.9079 High Similarity NPC75906
0.906 High Similarity NPC262198
0.9051 High Similarity NPC476850
0.9051 High Similarity NPC476853
0.9051 High Similarity NPC476861
0.9045 High Similarity NPC476860
0.9045 High Similarity NPC123088
0.9038 High Similarity NPC329938
0.9038 High Similarity NPC472771
0.9038 High Similarity NPC197596
0.9032 High Similarity NPC474932
0.9032 High Similarity NPC477403
0.902 High Similarity NPC57998
0.902 High Similarity NPC30222
0.8987 High Similarity NPC23387
0.8981 High Similarity NPC472773
0.8981 High Similarity NPC419
0.8981 High Similarity NPC302369
0.8981 High Similarity NPC39986
0.8981 High Similarity NPC134254
0.8974 High Similarity NPC191828
0.8974 High Similarity NPC477402
0.8974 High Similarity NPC335761
0.8961 High Similarity NPC35000
0.8947 High Similarity NPC156189
0.8947 High Similarity NPC46551
0.8938 High Similarity NPC302392
0.8917 High Similarity NPC471166
0.8917 High Similarity NPC471167
0.8917 High Similarity NPC263432
0.8917 High Similarity NPC96443
0.8917 High Similarity NPC82851
0.8917 High Similarity NPC290400
0.891 High Similarity NPC307383
0.891 High Similarity NPC473368
0.8904 High Similarity NPC476943
0.8903 High Similarity NPC204663
0.8882 High Similarity NPC470791
0.8882 High Similarity NPC470790
0.8861 High Similarity NPC224394
0.8861 High Similarity NPC663
0.8846 High Similarity NPC173544
0.8846 High Similarity NPC195131
0.8846 High Similarity NPC299038
0.8836 High Similarity NPC310830
0.8816 High Similarity NPC19747
0.8812 High Similarity NPC472774
0.8812 High Similarity NPC472775
0.8808 High Similarity NPC471292
0.8805 High Similarity NPC470182
0.8797 High Similarity NPC149896
0.8797 High Similarity NPC117986
0.8797 High Similarity NPC200782
0.8782 High Similarity NPC469485
0.8776 High Similarity NPC220094
0.8758 High Similarity NPC472652
0.8758 High Similarity NPC329180
0.8758 High Similarity NPC271235
0.8742 High Similarity NPC471168
0.8742 High Similarity NPC472669
0.8742 High Similarity NPC165218
0.8733 High Similarity NPC223415
0.8726 High Similarity NPC187149
0.872 High Similarity NPC167340
0.8718 High Similarity NPC44675
0.8718 High Similarity NPC281258
0.8718 High Similarity NPC214541
0.8712 High Similarity NPC469848
0.8696 High Similarity NPC472651
0.8688 High Similarity NPC271657
0.8684 High Similarity NPC346
0.8679 High Similarity NPC18347
0.8679 High Similarity NPC472767
0.8679 High Similarity NPC211777
0.8679 High Similarity NPC207978
0.8679 High Similarity NPC6326
0.8679 High Similarity NPC472668
0.8675 High Similarity NPC86935
0.8675 High Similarity NPC476944
0.8675 High Similarity NPC199044
0.8675 High Similarity NPC238843
0.8671 High Similarity NPC474611
0.8667 High Similarity NPC121158
0.8662 High Similarity NPC41880
0.8645 High Similarity NPC116717
0.8636 High Similarity NPC195325
0.8636 High Similarity NPC472654
0.8634 High Similarity NPC475779
0.8634 High Similarity NPC478178
0.8627 High Similarity NPC250228
0.8625 High Similarity NPC198047
0.8618 High Similarity NPC41182
0.8609 High Similarity NPC470741
0.8608 High Similarity NPC45101
0.8608 High Similarity NPC469847
0.8608 High Similarity NPC261597
0.8608 High Similarity NPC36655
0.86 High Similarity NPC20500
0.8599 High Similarity NPC92979
0.8581 High Similarity NPC310043
0.858 High Similarity NPC100333
0.858 High Similarity NPC476224
0.8562 High Similarity NPC188649
0.8562 High Similarity NPC62799
0.8553 High Similarity NPC262872
0.8553 High Similarity NPC475967
0.8553 High Similarity NPC251865
0.8544 High Similarity NPC175964
0.8544 High Similarity NPC471169
0.8535 High Similarity NPC114880
0.8533 High Similarity NPC56197
0.8528 High Similarity NPC327922
0.8526 High Similarity NPC272590
0.8519 High Similarity NPC472141
0.8519 High Similarity NPC149945
0.8519 High Similarity NPC97574
0.8519 High Similarity NPC93172
0.8519 High Similarity NPC121995
0.8516 High Similarity NPC211625
0.8516 High Similarity NPC471001
0.8514 High Similarity NPC214572
0.8509 High Similarity NPC288602
0.8509 High Similarity NPC472139
0.8509 High Similarity NPC88841
0.8506 High Similarity NPC471174
0.8506 High Similarity NPC255414
0.85 High Similarity NPC287559
0.8491 Intermediate Similarity NPC472778
0.8491 Intermediate Similarity NPC472777
0.8491 Intermediate Similarity NPC81405
0.8491 Intermediate Similarity NPC472776
0.8487 Intermediate Similarity NPC267632
0.8481 Intermediate Similarity NPC471175
0.8476 Intermediate Similarity NPC82602
0.8471 Intermediate Similarity NPC476940
0.8471 Intermediate Similarity NPC476939
0.8471 Intermediate Similarity NPC44577
0.8471 Intermediate Similarity NPC268905
0.8466 Intermediate Similarity NPC472764
0.8466 Intermediate Similarity NPC478179
0.8466 Intermediate Similarity NPC270312
0.8462 Intermediate Similarity NPC212257
0.8462 Intermediate Similarity NPC476936

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC469850 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8365 Intermediate Similarity NPD5760 Phase 2
0.8365 Intermediate Similarity NPD5761 Phase 2
0.816 Intermediate Similarity NPD5537 Clinical (unspecified phase)
0.814 Intermediate Similarity NPD8434 Phase 2
0.759 Intermediate Similarity NPD7819 Suspended
0.7443 Intermediate Similarity NPD6764 Approved
0.7443 Intermediate Similarity NPD6765 Approved
0.744 Intermediate Similarity NPD8443 Clinical (unspecified phase)
0.7439 Intermediate Similarity NPD920 Approved
0.7368 Intermediate Similarity NPD5494 Approved
0.7365 Intermediate Similarity NPD7411 Suspended
0.7317 Intermediate Similarity NPD642 Clinical (unspecified phase)
0.7314 Intermediate Similarity NPD7893 Clinical (unspecified phase)
0.7312 Intermediate Similarity NPD1471 Phase 3
0.7278 Intermediate Similarity NPD6785 Approved
0.7278 Intermediate Similarity NPD6784 Approved
0.7251 Intermediate Similarity NPD3749 Approved
0.7246 Intermediate Similarity NPD3226 Approved
0.72 Intermediate Similarity NPD7852 Clinical (unspecified phase)
0.7195 Intermediate Similarity NPD643 Clinical (unspecified phase)
0.7176 Intermediate Similarity NPD7096 Clinical (unspecified phase)
0.7151 Intermediate Similarity NPD6559 Discontinued
0.7151 Intermediate Similarity NPD7075 Discontinued
0.7143 Intermediate Similarity NPD2796 Approved
0.7128 Intermediate Similarity NPD8285 Discontinued
0.7117 Intermediate Similarity NPD7421 Clinical (unspecified phase)
0.7108 Intermediate Similarity NPD7004 Clinical (unspecified phase)
0.7101 Intermediate Similarity NPD6599 Discontinued
0.7099 Intermediate Similarity NPD2343 Clinical (unspecified phase)
0.7081 Intermediate Similarity NPD3748 Approved
0.7073 Intermediate Similarity NPD4628 Phase 3
0.7073 Intermediate Similarity NPD6398 Clinical (unspecified phase)
0.7029 Intermediate Similarity NPD1247 Approved
0.7012 Intermediate Similarity NPD1243 Approved
0.7011 Intermediate Similarity NPD919 Approved
0.7006 Intermediate Similarity NPD6832 Phase 2
0.6995 Remote Similarity NPD8055 Clinical (unspecified phase)
0.6994 Remote Similarity NPD2346 Discontinued
0.6989 Remote Similarity NPD7879 Clinical (unspecified phase)
0.6985 Remote Similarity NPD8404 Phase 2
0.6978 Remote Similarity NPD8312 Approved
0.6978 Remote Similarity NPD8313 Approved
0.6964 Remote Similarity NPD6273 Approved
0.6932 Remote Similarity NPD6959 Discontinued
0.6932 Remote Similarity NPD8127 Discontinued
0.6919 Remote Similarity NPD6801 Discontinued
0.6905 Remote Similarity NPD2532 Approved
0.6905 Remote Similarity NPD2533 Approved
0.6905 Remote Similarity NPD2534 Approved
0.6901 Remote Similarity NPD4380 Phase 2
0.6897 Remote Similarity NPD4868 Clinical (unspecified phase)
0.6897 Remote Similarity NPD7768 Phase 2
0.6893 Remote Similarity NPD6808 Phase 2
0.6889 Remote Similarity NPD5844 Phase 1
0.6886 Remote Similarity NPD7236 Approved
0.6879 Remote Similarity NPD2393 Clinical (unspecified phase)
0.6875 Remote Similarity NPD8032 Phase 2
0.6872 Remote Similarity NPD7473 Discontinued
0.6871 Remote Similarity NPD2799 Discontinued
0.6867 Remote Similarity NPD3750 Approved
0.6865 Remote Similarity NPD8150 Discontinued
0.6857 Remote Similarity NPD4381 Clinical (unspecified phase)
0.6848 Remote Similarity NPD1549 Phase 2
0.6845 Remote Similarity NPD6799 Approved
0.6842 Remote Similarity NPD5808 Clinical (unspecified phase)
0.6839 Remote Similarity NPD3817 Phase 2
0.6839 Remote Similarity NPD5402 Approved
0.6833 Remote Similarity NPD7799 Discontinued
0.6829 Remote Similarity NPD6100 Approved
0.6829 Remote Similarity NPD6099 Approved
0.6815 Remote Similarity NPD3266 Approved
0.6815 Remote Similarity NPD3267 Approved
0.6807 Remote Similarity NPD2800 Approved
0.6805 Remote Similarity NPD7410 Clinical (unspecified phase)
0.6805 Remote Similarity NPD4378 Clinical (unspecified phase)
0.6796 Remote Similarity NPD7804 Clinical (unspecified phase)
0.6788 Remote Similarity NPD1550 Clinical (unspecified phase)
0.6788 Remote Similarity NPD1552 Clinical (unspecified phase)
0.6784 Remote Similarity NPD7239 Suspended
0.6776 Remote Similarity NPD7685 Pre-registration
0.676 Remote Similarity NPD3926 Phase 2
0.6744 Remote Similarity NPD7458 Discontinued
0.674 Remote Similarity NPD3751 Discontinued
0.674 Remote Similarity NPD3818 Discontinued
0.6727 Remote Similarity NPD1551 Phase 2
0.6725 Remote Similarity NPD5403 Approved
0.6725 Remote Similarity NPD6980 Clinical (unspecified phase)
0.6724 Remote Similarity NPD1934 Approved
0.6708 Remote Similarity NPD3268 Approved
0.6708 Remote Similarity NPD2313 Discontinued
0.6706 Remote Similarity NPD5401 Approved
0.6704 Remote Similarity NPD6232 Discontinued
0.6702 Remote Similarity NPD8397 Clinical (unspecified phase)
0.6687 Remote Similarity NPD2344 Approved
0.6687 Remote Similarity NPD1899 Clinical (unspecified phase)
0.6667 Remote Similarity NPD7074 Phase 3
0.6667 Remote Similarity NPD5890 Approved
0.6667 Remote Similarity NPD1547 Clinical (unspecified phase)
0.6667 Remote Similarity NPD5889 Approved
0.6667 Remote Similarity NPD7033 Discontinued
0.6649 Remote Similarity NPD4107 Approved
0.6647 Remote Similarity NPD970 Clinical (unspecified phase)
0.6645 Remote Similarity NPD17 Approved
0.663 Remote Similarity NPD6167 Clinical (unspecified phase)
0.663 Remote Similarity NPD6166 Phase 2
0.663 Remote Similarity NPD6168 Clinical (unspecified phase)
0.663 Remote Similarity NPD7993 Clinical (unspecified phase)
0.6627 Remote Similarity NPD2935 Discontinued
0.6626 Remote Similarity NPD4307 Phase 2
0.6624 Remote Similarity NPD3972 Approved
0.6612 Remote Similarity NPD7054 Approved
0.6611 Remote Similarity NPD3787 Discontinued
0.6611 Remote Similarity NPD7229 Phase 3
0.661 Remote Similarity NPD3882 Suspended
0.6609 Remote Similarity NPD6585 Discontinued
0.6605 Remote Similarity NPD6859 Clinical (unspecified phase)
0.6578 Remote Similarity NPD8407 Phase 2
0.6576 Remote Similarity NPD7472 Approved
0.657 Remote Similarity NPD7314 Clinical (unspecified phase)
0.6568 Remote Similarity NPD7003 Approved
0.6566 Remote Similarity NPD1510 Phase 2
0.6559 Remote Similarity NPD4338 Clinical (unspecified phase)
0.6559 Remote Similarity NPD7808 Phase 3
0.6554 Remote Similarity NPD5616 Clinical (unspecified phase)
0.6548 Remote Similarity NPD7435 Discontinued
0.6538 Remote Similarity NPD3412 Clinical (unspecified phase)
0.6538 Remote Similarity NPD2403 Approved
0.6534 Remote Similarity NPD37 Approved
0.6531 Remote Similarity NPD4482 Phase 3
0.6529 Remote Similarity NPD2309 Approved
0.6522 Remote Similarity NPD7907 Approved
0.6519 Remote Similarity NPD5710 Approved
0.6519 Remote Similarity NPD5711 Approved
0.6519 Remote Similarity NPD1608 Approved
0.6517 Remote Similarity NPD4967 Phase 2
0.6517 Remote Similarity NPD4966 Approved
0.6517 Remote Similarity NPD4965 Approved
0.6506 Remote Similarity NPD7097 Phase 1
0.6505 Remote Similarity NPD8368 Discontinued
0.6505 Remote Similarity NPD7251 Discontinued
0.6503 Remote Similarity NPD3764 Approved
0.6497 Remote Similarity NPD8455 Phase 2
0.6497 Remote Similarity NPD2801 Approved
0.6497 Remote Similarity NPD1465 Phase 2
0.6485 Remote Similarity NPD1933 Approved
0.6477 Remote Similarity NPD7615 Clinical (unspecified phase)
0.6474 Remote Similarity NPD5585 Approved
0.6471 Remote Similarity NPD8166 Discontinued
0.6467 Remote Similarity NPD4308 Phase 3
0.6467 Remote Similarity NPD7228 Approved
0.6465 Remote Similarity NPD7698 Approved
0.6465 Remote Similarity NPD7697 Approved
0.6465 Remote Similarity NPD7696 Phase 3
0.646 Remote Similarity NPD2798 Approved
0.646 Remote Similarity NPD1019 Discontinued
0.6452 Remote Similarity NPD6797 Phase 2
0.6452 Remote Similarity NPD5953 Discontinued
0.6448 Remote Similarity NPD7784 Clinical (unspecified phase)
0.6446 Remote Similarity NPD1607 Approved
0.6446 Remote Similarity NPD6651 Approved
0.6444 Remote Similarity NPD6234 Discontinued
0.6441 Remote Similarity NPD6280 Approved
0.6441 Remote Similarity NPD6279 Approved
0.644 Remote Similarity NPD4287 Approved
0.6436 Remote Similarity NPD7875 Clinical (unspecified phase)
0.6436 Remote Similarity NPD7874 Approved
0.6433 Remote Similarity NPD3887 Approved
0.6432 Remote Similarity NPD7871 Phase 2
0.6432 Remote Similarity NPD7870 Phase 2
0.6432 Remote Similarity NPD7286 Phase 2
0.6429 Remote Similarity NPD2438 Suspended
0.6425 Remote Similarity NPD7058 Phase 2
0.6425 Remote Similarity NPD7057 Phase 3
0.6425 Remote Similarity NPD4111 Phase 1
0.6424 Remote Similarity NPD2979 Phase 3
0.6424 Remote Similarity NPD1240 Approved
0.6404 Remote Similarity NPD7783 Phase 2
0.6404 Remote Similarity NPD7782 Clinical (unspecified phase)
0.6402 Remote Similarity NPD1699 Clinical (unspecified phase)
0.6398 Remote Similarity NPD1049 Clinical (unspecified phase)
0.6398 Remote Similarity NPD2797 Approved
0.6396 Remote Similarity NPD6779 Approved
0.6396 Remote Similarity NPD6777 Approved
0.6396 Remote Similarity NPD6780 Approved
0.6396 Remote Similarity NPD6781 Approved
0.6396 Remote Similarity NPD6782 Approved
0.6396 Remote Similarity NPD6776 Approved
0.6396 Remote Similarity NPD6778 Approved
0.6391 Remote Similarity NPD6006 Clinical (unspecified phase)
0.6391 Remote Similarity NPD6005 Phase 3
0.6391 Remote Similarity NPD6003 Clinical (unspecified phase)
0.6391 Remote Similarity NPD6004 Phase 3
0.6391 Remote Similarity NPD6002 Phase 3
0.6386 Remote Similarity NPD6355 Discontinued
0.6382 Remote Similarity NPD7497 Discontinued
0.6381 Remote Similarity NPD5619 Clinical (unspecified phase)
0.6378 Remote Similarity NPD7177 Discontinued
0.6374 Remote Similarity NPD7199 Phase 2
0.6374 Remote Similarity NPD1878 Clinical (unspecified phase)
0.6369 Remote Similarity NPD5353 Approved

Structure

External Identifiers

PubChem CID   49864069
ChEMBL   CHEMBL1215112
ZINC  

Physicochemical Properties

Molecular Weight:  568.27
ALogP:  0.6907
MLogP:  3.99
XLogP:  2.653
# Rotatable Bonds:  15
Polar Surface Area:  121.64
# H-Bond Aceptor:  8
# H-Bond Donor:  0
# Rings:  6
# Heavy Atoms:  41

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
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Biological Activities  
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