Natural Product: NPC197137

Natural Product ID:  NPC197137
Common Name:   Deacetylnimbin
IUPAC Name:  
Synonyms:   6-Deacetylnimbin
Molecular Formula:   C28H34O8
Standard InCHIKey:  CTBHKOAPXBDFPX-PQYHCQQJSA-N
Standard InCHI:  InChI=1S/C28H34O8/c1-14-16(15-8-10-35-13-15)11-17-21(14)28(4)18(12-20(30)33-5)27(3)19(29)7-9-26(2,25(32)34-6)23(27)22(31)24(28)36-17/h7-10,13,16-18,22-24,31H,11-12H2,1-6H3/t16-,17-,18-,22-,23+,24-,26-,27+,28-/m1/s1
Canonical SMILES:  COC(=O)C[C@H]1[C@@]2(C)[C@H](O[C@H]3C2=C(C)[C@@H](C3)c2cocc2)[C@@H]([C@@H]2[C@]1(C)C(=O)C=C[C@@]2(C)C(=O)OC)O
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO4406 Azadirachta indica Species Meliaceae Eukaryota Seeds PMID[21381696]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT116 Cell Line HL-60 Homo sapiens IC50 = 11600 nM 21381696
NPT81 Cell Line A549 Homo sapiens IC50 > 20000 nM 21381696
NPT2 Others Unspecified IC50 > 20000 nM 21381696
NPT134 Cell Line SK-BR-3 Homo sapiens IC50 > 20000 nM 21381696
NPT846 Organism Cnaphalocrocis medinalis Cnaphalocrocis medinalis Activity = 39.12 % 10.1016/j.cropro.2005.01.009
NPT846 Organism Cnaphalocrocis medinalis Cnaphalocrocis medinalis Activity = 46.75 % 10.1016/j.cropro.2005.01.009
NPT846 Organism Cnaphalocrocis medinalis Cnaphalocrocis medinalis Activity = 0.957 mg/kg/day 10.1016/j.cropro.2005.01.009
NPT846 Organism Cnaphalocrocis medinalis Cnaphalocrocis medinalis Activity = 0.4247 mg/kg/day 10.1016/j.cropro.2005.01.009
NPT846 Organism Cnaphalocrocis medinalis Cnaphalocrocis medinalis Activity = 2.327 mg/kg/day 10.1016/j.cropro.2005.01.009
NPT847 Organism Reticulitermes speratus Reticulitermes speratus Survival = 74 % 10.1271/bbb.56.1835
NPT847 Organism Reticulitermes speratus Reticulitermes speratus Survival = 78.5 % 10.1271/bbb.56.1835
NPT847 Organism Reticulitermes speratus Reticulitermes speratus Survival = 85 % 10.1271/bbb.56.1835
NPT847 Organism Reticulitermes speratus Reticulitermes speratus Survival = 87.5 % 10.1271/bbb.56.1835

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC197137 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9662 High Similarity NPC116717
0.9474 High Similarity NPC470118
0.947 High Similarity NPC296807
0.947 High Similarity NPC141538
0.947 High Similarity NPC155939
0.947 High Similarity NPC92979
0.94 High Similarity NPC291150
0.9333 High Similarity NPC5180
0.9286 High Similarity NPC475226
0.9286 High Similarity NPC472671
0.9221 High Similarity NPC214495
0.9221 High Similarity NPC475066
0.9221 High Similarity NPC470119
0.9211 High Similarity NPC470996
0.9205 High Similarity NPC196846
0.9167 High Similarity NPC470792
0.9139 High Similarity NPC234494
0.9139 High Similarity NPC471001
0.9125 High Similarity NPC285227
0.9085 High Similarity NPC33938
0.9079 High Similarity NPC470997
0.9026 High Similarity NPC34421
0.9026 High Similarity NPC98206
0.9026 High Similarity NPC237259
0.9007 High Similarity NPC302987
0.9007 High Similarity NPC471174
0.9 High Similarity NPC34056
0.8994 High Similarity NPC307781
0.8994 High Similarity NPC472670
0.8974 High Similarity NPC469847
0.8974 High Similarity NPC472776
0.8974 High Similarity NPC472777
0.8974 High Similarity NPC472778
0.8968 High Similarity NPC264943
0.8961 High Similarity NPC322546
0.8961 High Similarity NPC182427
0.8961 High Similarity NPC29695
0.8961 High Similarity NPC308205
0.8947 High Similarity NPC471007
0.894 High Similarity NPC470999
0.8931 High Similarity NPC276551
0.8924 High Similarity NPC5741
0.8924 High Similarity NPC69028
0.8903 High Similarity NPC253201
0.8903 High Similarity NPC302054
0.8896 High Similarity NPC272590
0.8889 High Similarity NPC125182
0.8889 High Similarity NPC69647
0.8889 High Similarity NPC472654
0.8882 High Similarity NPC216755
0.8882 High Similarity NPC472766
0.8882 High Similarity NPC472765
0.8875 High Similarity NPC470875
0.8868 High Similarity NPC469338
0.8868 High Similarity NPC472773
0.8868 High Similarity NPC292389
0.8861 High Similarity NPC477402
0.8846 High Similarity NPC469336
0.8839 High Similarity NPC472672
0.8839 High Similarity NPC471002
0.8839 High Similarity NPC268905
0.882 High Similarity NPC472764
0.8812 High Similarity NPC470940
0.8812 High Similarity NPC469849
0.8808 High Similarity NPC251865
0.8805 High Similarity NPC472771
0.8797 High Similarity NPC84349
0.8788 High Similarity NPC478177
0.8782 High Similarity NPC178932
0.8774 High Similarity NPC471000
0.8773 High Similarity NPC475237
0.8773 High Similarity NPC475641
0.8766 High Similarity NPC470998
0.8766 High Similarity NPC195325
0.8765 High Similarity NPC472673
0.8765 High Similarity NPC471397
0.8758 High Similarity NPC255414
0.875 High Similarity NPC285567
0.875 High Similarity NPC471168
0.875 High Similarity NPC477405
0.875 High Similarity NPC242068
0.875 High Similarity NPC247563
0.875 High Similarity NPC283209
0.875 High Similarity NPC185456
0.8742 High Similarity NPC470789
0.8726 High Similarity NPC214541
0.8726 High Similarity NPC44675
0.8725 High Similarity NPC90953
0.8718 High Similarity NPC246164
0.8718 High Similarity NPC75906
0.8718 High Similarity NPC121615
0.8718 High Similarity NPC294511
0.8712 High Similarity NPC118086
0.8704 High Similarity NPC472775
0.8704 High Similarity NPC173516
0.8704 High Similarity NPC472774
0.8704 High Similarity NPC476850
0.8704 High Similarity NPC476861
0.8696 High Similarity NPC123088
0.8693 High Similarity NPC471292
0.8688 High Similarity NPC68848
0.8688 High Similarity NPC472767
0.8688 High Similarity NPC329938
0.8684 High Similarity NPC238843
0.8684 High Similarity NPC199044
0.8679 High Similarity NPC477403
0.8679 High Similarity NPC475967
0.8679 High Similarity NPC307383
0.8675 High Similarity NPC121158
0.8671 High Similarity NPC469485
0.8667 High Similarity NPC471437
0.8667 High Similarity NPC94763
0.8667 High Similarity NPC471632
0.8667 High Similarity NPC236004
0.8654 High Similarity NPC18135
0.8642 High Similarity NPC472141
0.8642 High Similarity NPC475779
0.8642 High Similarity NPC121995
0.8639 High Similarity NPC105395
0.8634 High Similarity NPC663
0.8634 High Similarity NPC224394
0.8634 High Similarity NPC165218
0.8627 High Similarity NPC5676
0.8625 High Similarity NPC287559
0.8625 High Similarity NPC191828
0.8616 High Similarity NPC472772
0.8616 High Similarity NPC88007
0.8616 High Similarity NPC194499
0.8616 High Similarity NPC261597
0.8616 High Similarity NPC36655
0.8616 High Similarity NPC173544
0.8616 High Similarity NPC299038
0.8608 High Similarity NPC471175
0.8599 High Similarity NPC469503
0.8598 High Similarity NPC470995
0.859 High Similarity NPC156189
0.859 High Similarity NPC159927
0.859 High Similarity NPC469335
0.8589 High Similarity NPC472282
0.8589 High Similarity NPC100333
0.8589 High Similarity NPC472651
0.8589 High Similarity NPC478179
0.858 High Similarity NPC476857
0.858 High Similarity NPC476856
0.858 High Similarity NPC476858
0.8571 High Similarity NPC471003
0.8571 High Similarity NPC263432
0.8571 High Similarity NPC200782
0.8571 High Similarity NPC471166
0.8571 High Similarity NPC471167
0.8571 High Similarity NPC18986
0.8571 High Similarity NPC211777
0.8554 High Similarity NPC469576
0.8553 High Similarity NPC471169
0.8553 High Similarity NPC175964
0.8545 High Similarity NPC159232
0.8544 High Similarity NPC57998
0.8543 High Similarity NPC67003
0.8543 High Similarity NPC56197
0.8537 High Similarity NPC160651
0.8537 High Similarity NPC472652
0.8537 High Similarity NPC271235
0.8528 High Similarity NPC214600
0.8528 High Similarity NPC478178
0.8519 High Similarity NPC472139
0.8519 High Similarity NPC198047
0.8519 High Similarity NPC419
0.8516 High Similarity NPC250228
0.8512 High Similarity NPC11062
0.8509 High Similarity NPC25255
0.8503 High Similarity NPC469633
0.85 High Similarity NPC167142
0.85 High Similarity NPC472283
0.85 High Similarity NPC304692
0.85 High Similarity NPC187149
0.85 High Similarity NPC45101
0.85 High Similarity NPC195954
0.8497 Intermediate Similarity NPC80635
0.8497 Intermediate Similarity NPC223415
0.8494 Intermediate Similarity NPC469848
0.8491 Intermediate Similarity NPC281258
0.8491 Intermediate Similarity NPC35000
0.8485 Intermediate Similarity NPC82602
0.8476 Intermediate Similarity NPC310572
0.8476 Intermediate Similarity NPC476853
0.8471 Intermediate Similarity NPC228842
0.8466 Intermediate Similarity NPC470182
0.8466 Intermediate Similarity NPC27541
0.8466 Intermediate Similarity NPC126984
0.8466 Intermediate Similarity NPC62692
0.8466 Intermediate Similarity NPC61967
0.8462 Intermediate Similarity NPC470938
0.8457 Intermediate Similarity NPC5079
0.8457 Intermediate Similarity NPC472668
0.8457 Intermediate Similarity NPC82851
0.8457 Intermediate Similarity NPC207978
0.8457 Intermediate Similarity NPC193798
0.8457 Intermediate Similarity NPC188649
0.8447 Intermediate Similarity NPC262872
0.8446 Intermediate Similarity NPC218838

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC197137 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8261 Intermediate Similarity NPD5760 Phase 2
0.8261 Intermediate Similarity NPD5761 Phase 2
0.815 Intermediate Similarity NPD8434 Phase 2
0.7965 Intermediate Similarity NPD6764 Approved
0.7965 Intermediate Similarity NPD6765 Approved
0.7844 Intermediate Similarity NPD5537 Clinical (unspecified phase)
0.7784 Intermediate Similarity NPD6784 Approved
0.7784 Intermediate Similarity NPD6785 Approved
0.7625 Intermediate Similarity NPD4628 Phase 3
0.7241 Intermediate Similarity NPD8127 Discontinued
0.7222 Intermediate Similarity NPD2343 Clinical (unspecified phase)
0.7186 Intermediate Similarity NPD6273 Approved
0.7134 Intermediate Similarity NPD7421 Clinical (unspecified phase)
0.7104 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.7072 Intermediate Similarity NPD6559 Discontinued
0.7059 Intermediate Similarity NPD3226 Approved
0.7018 Intermediate Similarity NPD6599 Discontinued
0.7 Intermediate Similarity NPD8404 Phase 2
0.6994 Remote Similarity NPD7096 Clinical (unspecified phase)
0.6994 Remote Similarity NPD7819 Suspended
0.6971 Remote Similarity NPD7075 Discontinued
0.6941 Remote Similarity NPD920 Approved
0.6914 Remote Similarity NPD4966 Approved
0.6914 Remote Similarity NPD4965 Approved
0.6914 Remote Similarity NPD4868 Clinical (unspecified phase)
0.6914 Remote Similarity NPD4967 Phase 2
0.6909 Remote Similarity NPD5762 Approved
0.6909 Remote Similarity NPD6006 Clinical (unspecified phase)
0.6909 Remote Similarity NPD5763 Approved
0.6909 Remote Similarity NPD6003 Clinical (unspecified phase)
0.6909 Remote Similarity NPD6004 Phase 3
0.6909 Remote Similarity NPD1471 Phase 3
0.6909 Remote Similarity NPD6005 Phase 3
0.6909 Remote Similarity NPD6002 Phase 3
0.6906 Remote Similarity NPD5844 Phase 1
0.6905 Remote Similarity NPD7236 Approved
0.686 Remote Similarity NPD7458 Discontinued
0.6854 Remote Similarity NPD1247 Approved
0.6854 Remote Similarity NPD7199 Phase 2
0.6851 Remote Similarity NPD7799 Discontinued
0.6851 Remote Similarity NPD3818 Discontinued
0.6851 Remote Similarity NPD7893 Clinical (unspecified phase)
0.6839 Remote Similarity NPD6801 Discontinued
0.6836 Remote Similarity NPD6234 Discontinued
0.6836 Remote Similarity NPD919 Approved
0.6824 Remote Similarity NPD642 Clinical (unspecified phase)
0.6824 Remote Similarity NPD7004 Clinical (unspecified phase)
0.6811 Remote Similarity NPD8312 Approved
0.6811 Remote Similarity NPD8313 Approved
0.681 Remote Similarity NPD6355 Discontinued
0.6802 Remote Similarity NPD7239 Suspended
0.6798 Remote Similarity NPD5494 Approved
0.6796 Remote Similarity NPD7473 Discontinued
0.6793 Remote Similarity NPD7685 Pre-registration
0.6788 Remote Similarity NPD2799 Discontinued
0.6786 Remote Similarity NPD6398 Clinical (unspecified phase)
0.6782 Remote Similarity NPD7411 Suspended
0.6765 Remote Similarity NPD6799 Approved
0.6761 Remote Similarity NPD3817 Phase 2
0.6761 Remote Similarity NPD8443 Clinical (unspecified phase)
0.6758 Remote Similarity NPD7228 Approved
0.6743 Remote Similarity NPD37 Approved
0.6725 Remote Similarity NPD2533 Approved
0.6725 Remote Similarity NPD2534 Approved
0.6725 Remote Similarity NPD2532 Approved
0.6724 Remote Similarity NPD4380 Phase 2
0.6723 Remote Similarity NPD3882 Suspended
0.672 Remote Similarity NPD8397 Clinical (unspecified phase)
0.6707 Remote Similarity NPD2346 Discontinued
0.6706 Remote Similarity NPD643 Clinical (unspecified phase)
0.6705 Remote Similarity NPD2393 Clinical (unspecified phase)
0.6687 Remote Similarity NPD5647 Approved
0.6686 Remote Similarity NPD4109 Clinical (unspecified phase)
0.6686 Remote Similarity NPD4110 Phase 3
0.6685 Remote Similarity NPD7184 Clinical (unspecified phase)
0.6685 Remote Similarity NPD4381 Clinical (unspecified phase)
0.6667 Remote Similarity NPD5402 Approved
0.6667 Remote Similarity NPD6143 Clinical (unspecified phase)
0.6667 Remote Similarity NPD6653 Approved
0.665 Remote Similarity NPD7497 Discontinued
0.6649 Remote Similarity NPD7993 Clinical (unspecified phase)
0.6649 Remote Similarity NPD7879 Clinical (unspecified phase)
0.6648 Remote Similarity NPD1934 Approved
0.6646 Remote Similarity NPD1608 Approved
0.6646 Remote Similarity NPD4140 Approved
0.663 Remote Similarity NPD6232 Discontinued
0.6629 Remote Similarity NPD7028 Phase 2
0.6627 Remote Similarity NPD2800 Approved
0.6614 Remote Similarity NPD8150 Discontinued
0.6613 Remote Similarity NPD7240 Approved
0.6607 Remote Similarity NPD2344 Approved
0.6606 Remote Similarity NPD5735 Approved
0.6599 Remote Similarity NPD3057 Approved
0.6596 Remote Similarity NPD8407 Phase 2
0.6595 Remote Similarity NPD7074 Phase 3
0.6592 Remote Similarity NPD3749 Approved
0.6588 Remote Similarity NPD8166 Discontinued
0.6588 Remote Similarity NPD3750 Approved
0.6585 Remote Similarity NPD8032 Phase 2
0.6584 Remote Similarity NPD6007 Clinical (unspecified phase)
0.6582 Remote Similarity NPD4107 Approved
0.6576 Remote Similarity NPD2163 Approved
0.6571 Remote Similarity NPD5808 Clinical (unspecified phase)
0.6557 Remote Similarity NPD7852 Clinical (unspecified phase)
0.6557 Remote Similarity NPD6167 Clinical (unspecified phase)
0.6557 Remote Similarity NPD6166 Phase 2
0.6557 Remote Similarity NPD6168 Clinical (unspecified phase)
0.6552 Remote Similarity NPD6980 Clinical (unspecified phase)
0.6552 Remote Similarity NPD5403 Approved
0.6541 Remote Similarity NPD7054 Approved
0.6541 Remote Similarity NPD7804 Clinical (unspecified phase)
0.6532 Remote Similarity NPD5401 Approved
0.6529 Remote Similarity NPD1243 Approved
0.6524 Remote Similarity NPD3268 Approved
0.6524 Remote Similarity NPD2313 Discontinued
0.6524 Remote Similarity NPD6859 Clinical (unspecified phase)
0.6524 Remote Similarity NPD8368 Discontinued
0.6517 Remote Similarity NPD2801 Approved
0.6517 Remote Similarity NPD1465 Phase 2
0.6517 Remote Similarity NPD8455 Phase 2
0.6515 Remote Similarity NPD3533 Approved
0.6515 Remote Similarity NPD2972 Approved
0.6505 Remote Similarity NPD7472 Approved
0.6503 Remote Similarity NPD3926 Phase 2
0.6491 Remote Similarity NPD7003 Approved
0.6489 Remote Similarity NPD4338 Clinical (unspecified phase)
0.6488 Remote Similarity NPD3748 Approved
0.6476 Remote Similarity NPD5619 Clinical (unspecified phase)
0.6471 Remote Similarity NPD2424 Discontinued
0.6471 Remote Similarity NPD970 Clinical (unspecified phase)
0.6467 Remote Similarity NPD4575 Clinical (unspecified phase)
0.6465 Remote Similarity NPD4482 Phase 3
0.6456 Remote Similarity NPD17 Approved
0.6456 Remote Similarity NPD1778 Approved
0.6453 Remote Similarity NPD2309 Approved
0.645 Remote Similarity NPD6100 Approved
0.645 Remote Similarity NPD1551 Phase 2
0.645 Remote Similarity NPD6099 Approved
0.645 Remote Similarity NPD2796 Approved
0.6448 Remote Similarity NPD6808 Phase 2
0.6448 Remote Similarity NPD7229 Phase 3
0.6444 Remote Similarity NPD7057 Phase 3
0.6444 Remote Similarity NPD7058 Phase 2
0.6442 Remote Similarity NPD9494 Approved
0.6438 Remote Similarity NPD3972 Approved
0.6437 Remote Similarity NPD4378 Clinical (unspecified phase)
0.6436 Remote Similarity NPD7251 Discontinued
0.6432 Remote Similarity NPD2491 Approved
0.6429 Remote Similarity NPD7097 Phase 1
0.6424 Remote Similarity NPD6798 Discontinued
0.6424 Remote Similarity NPD3764 Approved
0.6407 Remote Similarity NPD230 Phase 1
0.6407 Remote Similarity NPD447 Suspended
0.6404 Remote Similarity NPD6385 Approved
0.6404 Remote Similarity NPD6386 Approved
0.6402 Remote Similarity NPD7808 Phase 3
0.6402 Remote Similarity NPD6832 Phase 2
0.6398 Remote Similarity NPD3751 Discontinued
0.6393 Remote Similarity NPD6959 Discontinued
0.6391 Remote Similarity NPD7033 Discontinued
0.6386 Remote Similarity NPD6663 Approved
0.6383 Remote Similarity NPD6797 Phase 2
0.6374 Remote Similarity NPD1549 Phase 2
0.6369 Remote Similarity NPD9092 Discovery
0.6364 Remote Similarity NPD7095 Approved
0.6364 Remote Similarity NPD5952 Clinical (unspecified phase)
0.6359 Remote Similarity NPD7315 Approved
0.6358 Remote Similarity NPD2354 Approved
0.6358 Remote Similarity NPD3887 Approved
0.6358 Remote Similarity NPD8651 Approved
0.6358 Remote Similarity NPD6190 Approved
0.6354 Remote Similarity NPD8424 Clinical (unspecified phase)
0.6354 Remote Similarity NPD7768 Phase 2
0.6353 Remote Similarity NPD2438 Suspended
0.6353 Remote Similarity NPD2935 Discontinued
0.635 Remote Similarity NPD3448 Approved
0.6347 Remote Similarity NPD7966 Clinical (unspecified phase)
0.6347 Remote Similarity NPD4060 Phase 1
0.6346 Remote Similarity NPD7157 Approved
0.6341 Remote Similarity NPD5676 Approved
0.6329 Remote Similarity NPD9545 Approved
0.6325 Remote Similarity NPD1699 Clinical (unspecified phase)
0.6319 Remote Similarity NPD3267 Approved
0.6319 Remote Similarity NPD6362 Approved
0.6319 Remote Similarity NPD1049 Clinical (unspecified phase)
0.6319 Remote Similarity NPD3266 Approved
0.6318 Remote Similarity NPD7435 Discontinued
0.6316 Remote Similarity NPD1550 Clinical (unspecified phase)
0.6316 Remote Similarity NPD1552 Clinical (unspecified phase)
0.631 Remote Similarity NPD7177 Discontinued
0.6307 Remote Similarity NPD7314 Clinical (unspecified phase)
0.6303 Remote Similarity NPD7907 Approved
0.6301 Remote Similarity NPD1878 Clinical (unspecified phase)
0.6298 Remote Similarity NPD5353 Approved
0.6298 Remote Similarity NPD5616 Clinical (unspecified phase)
0.6292 Remote Similarity NPD2651 Approved
0.6292 Remote Similarity NPD2649 Approved
0.629 Remote Similarity NPD2403 Approved
0.6289 Remote Similarity NPD8361 Approved
0.6289 Remote Similarity NPD8360 Approved

Structure

External Identifiers

PubChem CID   10505484
ChEMBL   CHEMBL1774398
ZINC  

Physicochemical Properties

Molecular Weight:  498.23
ALogP:  0.6329
MLogP:  3.66
XLogP:  0.771
# Rotatable Bonds:  13
Polar Surface Area:  112.27
# H-Bond Aceptor:  7
# H-Bond Donor:  1
# Rings:  5
# Heavy Atoms:  36

Download Data

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Biological Activities  
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