Natural Product: NPC198388

Natural Product ID:  NPC198388
Common Name:   Clinopodic Acid A
IUPAC Name:   (2R)-3-(3,4-dihydroxyphenyl)-2-[(E)-3-(4-hydroxyphenyl)prop-2-enoyl]oxypropanoic acid
Synonyms:  
Molecular Formula:   C18H16O7
Standard InCHIKey:  KIMHJUCTTIEANQ-KZJSRBBCSA-N
Standard InCHI:  InChI=1S/C18H16O7/c19-13-5-1-11(2-6-13)4-8-17(22)25-16(18(23)24)10-12-3-7-14(20)15(21)9-12/h1-9,16,19-21H,10H2,(H,23,24)/b8-4+/t16-/m1/s1
Canonical SMILES:  O=C(O[C@@H](C(=O)O)Cc1ccc(c(c1)O)O)/C=C/c1ccc(cc1)O
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO13475.1 Clinopodium chinense Under-species NA NA PMID[19711986]
NPO23754 Solanum aculeatissimum Species Solanaceae Eukaryota UNPD*
NPO10211 Pajanelia multijuga NA NA NA UNPD*
NPO12339 Daphne feddei Species Thymelaeaceae Eukaryota UNPD*
NPO21329 Ilyonectria destructans Species Nectriaceae Eukaryota UNPD*

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT40 Individual Protein 72 kDa type IV collagenase Rattus norvegicus IC50 > 100000 nM 19711986

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC198388 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.992 High Similarity NPC18074
0.992 High Similarity NPC25581
0.992 High Similarity NPC61
0.992 High Similarity NPC5419
0.9841 High Similarity NPC168799
0.9841 High Similarity NPC155209
0.9394 High Similarity NPC288452
0.9394 High Similarity NPC289690
0.9323 High Similarity NPC38473
0.9248 High Similarity NPC156709
0.9248 High Similarity NPC179505
0.9225 High Similarity NPC318799
0.9194 High Similarity NPC472271
0.9194 High Similarity NPC147654
0.916 High Similarity NPC106406
0.9118 High Similarity NPC160378
0.9098 High Similarity NPC279676
0.9098 High Similarity NPC67349
0.9044 High Similarity NPC303090
0.9044 High Similarity NPC319628
0.9044 High Similarity NPC220664
0.9044 High Similarity NPC37331
0.9044 High Similarity NPC284948
0.9037 High Similarity NPC477279
0.903 High Similarity NPC302857
0.903 High Similarity NPC142703
0.903 High Similarity NPC37250
0.903 High Similarity NPC152942
0.903 High Similarity NPC278068
0.903 High Similarity NPC219428
0.8976 High Similarity NPC288945
0.8976 High Similarity NPC85565
0.8971 High Similarity NPC35702
0.8971 High Similarity NPC477277
0.8971 High Similarity NPC477335
0.8971 High Similarity NPC297517
0.8971 High Similarity NPC471027
0.8971 High Similarity NPC206095
0.8971 High Similarity NPC477278
0.8971 High Similarity NPC224389
0.8971 High Similarity NPC13818
0.8963 High Similarity NPC26241
0.8963 High Similarity NPC476819
0.8963 High Similarity NPC303683
0.8963 High Similarity NPC205751
0.8963 High Similarity NPC295492
0.8963 High Similarity NPC274891
0.8963 High Similarity NPC476820
0.8963 High Similarity NPC474875
0.896 High Similarity NPC470849
0.896 High Similarity NPC470848
0.8952 High Similarity NPC263386
0.8952 High Similarity NPC141791
0.8921 High Similarity NPC229264
0.8905 High Similarity NPC43158
0.8905 High Similarity NPC192831
0.8905 High Similarity NPC472016
0.8905 High Similarity NPC277315
0.8905 High Similarity NPC258469
0.8889 High Similarity NPC284409
0.8857 High Similarity NPC471076
0.8857 High Similarity NPC192568
0.8855 High Similarity NPC217052
0.8855 High Similarity NPC237506
0.8855 High Similarity NPC329344
0.8855 High Similarity NPC32626
0.8797 High Similarity NPC471749
0.8786 High Similarity NPC143892
0.8786 High Similarity NPC221383
0.8786 High Similarity NPC299090
0.8786 High Similarity NPC283081
0.8777 High Similarity NPC477333
0.875 High Similarity NPC24295
0.875 High Similarity NPC283560
0.8732 High Similarity NPC259576
0.8732 High Similarity NPC221091
0.8731 High Similarity NPC248150
0.8731 High Similarity NPC68517
0.872 High Similarity NPC275519
0.872 High Similarity NPC309434
0.872 High Similarity NPC63126
0.8671 High Similarity NPC300329
0.8667 High Similarity NPC233350
0.8667 High Similarity NPC70680
0.8667 High Similarity NPC182217
0.8652 High Similarity NPC322660
0.8647 High Similarity NPC108553
0.8643 High Similarity NPC258671
0.8643 High Similarity NPC53884
0.8636 High Similarity NPC241354
0.8636 High Similarity NPC94810
0.8623 High Similarity NPC9218
0.8611 High Similarity NPC95498
0.8611 High Similarity NPC246566
0.8605 High Similarity NPC212541
0.8605 High Similarity NPC14141
0.8603 High Similarity NPC90431
0.8601 High Similarity NPC32197
0.8594 High Similarity NPC322332
0.8593 High Similarity NPC886
0.8593 High Similarity NPC135127
0.8593 High Similarity NPC34293
0.8593 High Similarity NPC474895
0.8593 High Similarity NPC287597
0.8592 High Similarity NPC98009
0.8582 High Similarity NPC98356
0.8571 High Similarity NPC203124
0.8571 High Similarity NPC304956
0.8571 High Similarity NPC474692
0.8561 High Similarity NPC253722
0.8561 High Similarity NPC31751
0.8561 High Similarity NPC110313
0.8561 High Similarity NPC253481
0.856 High Similarity NPC61062
0.856 High Similarity NPC281277
0.856 High Similarity NPC277394
0.856 High Similarity NPC299252
0.8552 High Similarity NPC475216
0.8552 High Similarity NPC475595
0.8552 High Similarity NPC266084
0.8552 High Similarity NPC475145
0.8552 High Similarity NPC83663
0.8552 High Similarity NPC475162
0.8552 High Similarity NPC473544
0.8552 High Similarity NPC44730
0.8551 High Similarity NPC322021
0.855 High Similarity NPC120225
0.855 High Similarity NPC213552
0.8542 High Similarity NPC477334
0.854 High Similarity NPC308976
0.8531 High Similarity NPC42464
0.8529 High Similarity NPC123988
0.8527 High Similarity NPC86900
0.8519 High Similarity NPC477281
0.8519 High Similarity NPC477280
0.8519 High Similarity NPC475468
0.8519 High Similarity NPC19719
0.85 High Similarity NPC285550
0.8496 Intermediate Similarity NPC226855
0.8492 Intermediate Similarity NPC145023
0.8492 Intermediate Similarity NPC175799
0.8492 Intermediate Similarity NPC610
0.8492 Intermediate Similarity NPC200988
0.8485 Intermediate Similarity NPC5018
0.8485 Intermediate Similarity NPC123722
0.8485 Intermediate Similarity NPC151167
0.8485 Intermediate Similarity NPC276466
0.8485 Intermediate Similarity NPC123228
0.848 Intermediate Similarity NPC233669
0.8473 Intermediate Similarity NPC132921
0.8473 Intermediate Similarity NPC280767
0.8473 Intermediate Similarity NPC289459
0.8472 Intermediate Similarity NPC306343
0.8467 Intermediate Similarity NPC471664
0.8467 Intermediate Similarity NPC471665
0.8462 Intermediate Similarity NPC43123
0.8462 Intermediate Similarity NPC472969
0.8456 Intermediate Similarity NPC471110
0.8444 Intermediate Similarity NPC323379
0.8444 Intermediate Similarity NPC327204
0.844 Intermediate Similarity NPC473090
0.844 Intermediate Similarity NPC226738
0.844 Intermediate Similarity NPC121573
0.844 Intermediate Similarity NPC50221
0.844 Intermediate Similarity NPC470130
0.844 Intermediate Similarity NPC114242
0.844 Intermediate Similarity NPC183824
0.844 Intermediate Similarity NPC190587
0.844 Intermediate Similarity NPC22176
0.8433 Intermediate Similarity NPC172673
0.8433 Intermediate Similarity NPC285361
0.8425 Intermediate Similarity NPC86198
0.8421 Intermediate Similarity NPC167463
0.8421 Intermediate Similarity NPC217431
0.8409 Intermediate Similarity NPC147192
0.8409 Intermediate Similarity NPC90128
0.8409 Intermediate Similarity NPC168653
0.8409 Intermediate Similarity NPC251407
0.8409 Intermediate Similarity NPC118584
0.8409 Intermediate Similarity NPC179777
0.8409 Intermediate Similarity NPC84076
0.8409 Intermediate Similarity NPC303680
0.8409 Intermediate Similarity NPC475695
0.8406 Intermediate Similarity NPC260425
0.8406 Intermediate Similarity NPC302583
0.8406 Intermediate Similarity NPC78363
0.8406 Intermediate Similarity NPC126206
0.8406 Intermediate Similarity NPC100558
0.8406 Intermediate Similarity NPC310252
0.8406 Intermediate Similarity NPC84789
0.8403 Intermediate Similarity NPC476394
0.8403 Intermediate Similarity NPC98809
0.84 Intermediate Similarity NPC328593
0.84 Intermediate Similarity NPC217472
0.84 Intermediate Similarity NPC261453
0.84 Intermediate Similarity NPC33749
0.8397 Intermediate Similarity NPC469568
0.8397 Intermediate Similarity NPC246704
0.8382 Intermediate Similarity NPC129889
0.8382 Intermediate Similarity NPC307006

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC198388 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.9044 High Similarity NPD6190 Approved
0.8345 Intermediate Similarity NPD7266 Discontinued
0.8116 Intermediate Similarity NPD230 Phase 1
0.8045 Intermediate Similarity NPD4379 Clinical (unspecified phase)
0.8042 Intermediate Similarity NPD8166 Discontinued
0.7973 Intermediate Similarity NPD3455 Phase 2
0.7917 Intermediate Similarity NPD4628 Phase 3
0.7899 Intermediate Similarity NPD6798 Discontinued
0.7895 Intermediate Similarity NPD4868 Clinical (unspecified phase)
0.7895 Intermediate Similarity NPD3882 Suspended
0.7877 Intermediate Similarity NPD6143 Clinical (unspecified phase)
0.7863 Intermediate Similarity NPD9545 Approved
0.7857 Intermediate Similarity NPD6355 Discontinued
0.7842 Intermediate Similarity NPD6233 Phase 2
0.7842 Intermediate Similarity NPD4062 Phase 3
0.777 Intermediate Similarity NPD3764 Approved
0.7712 Intermediate Similarity NPD3817 Phase 2
0.7698 Intermediate Similarity NPD3027 Phase 3
0.766 Intermediate Similarity NPD4060 Phase 1
0.7635 Intermediate Similarity NPD6799 Approved
0.7613 Intermediate Similarity NPD7075 Discontinued
0.7606 Intermediate Similarity NPD4340 Discontinued
0.7582 Intermediate Similarity NPD1934 Approved
0.7578 Intermediate Similarity NPD3021 Approved
0.7578 Intermediate Similarity NPD3022 Approved
0.7574 Intermediate Similarity NPD9269 Phase 2
0.7571 Intermediate Similarity NPD7095 Approved
0.7554 Intermediate Similarity NPD9494 Approved
0.7546 Intermediate Similarity NPD4338 Clinical (unspecified phase)
0.7535 Intermediate Similarity NPD826 Approved
0.7535 Intermediate Similarity NPD825 Approved
0.7535 Intermediate Similarity NPD943 Approved
0.7533 Intermediate Similarity NPD1512 Approved
0.7532 Intermediate Similarity NPD7096 Clinical (unspecified phase)
0.7532 Intermediate Similarity NPD2393 Clinical (unspecified phase)
0.7531 Intermediate Similarity NPD7993 Clinical (unspecified phase)
0.7519 Intermediate Similarity NPD5536 Phase 2
0.7484 Intermediate Similarity NPD5402 Approved
0.7483 Intermediate Similarity NPD5403 Approved
0.7452 Intermediate Similarity NPD6234 Discontinued
0.7438 Intermediate Similarity NPD6167 Clinical (unspecified phase)
0.7438 Intermediate Similarity NPD6166 Phase 2
0.7438 Intermediate Similarity NPD6168 Clinical (unspecified phase)
0.7432 Intermediate Similarity NPD4110 Phase 3
0.7432 Intermediate Similarity NPD4109 Clinical (unspecified phase)
0.7424 Intermediate Similarity NPD2629 Approved
0.7423 Intermediate Similarity NPD6797 Phase 2
0.7419 Intermediate Similarity NPD2801 Approved
0.7415 Intermediate Similarity NPD5958 Discontinued
0.7415 Intermediate Similarity NPD4534 Discontinued
0.7413 Intermediate Similarity NPD1612 Clinical (unspecified phase)
0.7413 Intermediate Similarity NPD1613 Approved
0.741 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.74 Intermediate Similarity NPD1511 Approved
0.7397 Intermediate Similarity NPD2935 Discontinued
0.7394 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.7378 Intermediate Similarity NPD7251 Discontinued
0.7365 Intermediate Similarity NPD7421 Clinical (unspecified phase)
0.7361 Intermediate Similarity NPD555 Phase 2
0.7355 Intermediate Similarity NPD6801 Discontinued
0.7351 Intermediate Similarity NPD5401 Approved
0.7346 Intermediate Similarity NPD3818 Discontinued
0.7338 Intermediate Similarity NPD6599 Discontinued
0.7333 Intermediate Similarity NPD1894 Discontinued
0.7328 Intermediate Similarity NPD228 Approved
0.732 Intermediate Similarity NPD1653 Approved
0.7319 Intermediate Similarity NPD1608 Approved
0.729 Intermediate Similarity NPD6386 Approved
0.729 Intermediate Similarity NPD6385 Approved
0.7287 Intermediate Similarity NPD9265 Clinical (unspecified phase)
0.7279 Intermediate Similarity NPD9570 Approved
0.7279 Intermediate Similarity NPD9268 Approved
0.7279 Intermediate Similarity NPD1501 Clinical (unspecified phase)
0.7273 Intermediate Similarity NPD7685 Pre-registration
0.7267 Intermediate Similarity NPD7184 Clinical (unspecified phase)
0.7255 Intermediate Similarity NPD6980 Clinical (unspecified phase)
0.7254 Intermediate Similarity NPD1529 Clinical (unspecified phase)
0.7246 Intermediate Similarity NPD1535 Discovery
0.7244 Intermediate Similarity NPD37 Approved
0.7237 Intermediate Similarity NPD3146 Approved
0.7237 Intermediate Similarity NPD3688 Clinical (unspecified phase)
0.7234 Intermediate Similarity NPD258 Approved
0.7234 Intermediate Similarity NPD257 Approved
0.7229 Intermediate Similarity NPD7808 Phase 3
0.7226 Intermediate Similarity NPD4380 Phase 2
0.7222 Intermediate Similarity NPD259 Phase 1
0.7222 Intermediate Similarity NPD6663 Approved
0.7215 Intermediate Similarity NPD4965 Approved
0.7215 Intermediate Similarity NPD4966 Approved
0.7215 Intermediate Similarity NPD4967 Phase 2
0.7211 Intermediate Similarity NPD651 Clinical (unspecified phase)
0.72 Intermediate Similarity NPD3750 Approved
0.7197 Intermediate Similarity NPD1465 Phase 2
0.7195 Intermediate Similarity NPD7054 Approved
0.7195 Intermediate Similarity NPD5844 Phase 1
0.7194 Intermediate Similarity NPD1481 Phase 2
0.7183 Intermediate Similarity NPD5736 Approved
0.7183 Intermediate Similarity NPD1530 Clinical (unspecified phase)
0.7183 Intermediate Similarity NPD9569 Approved
0.7176 Intermediate Similarity NPD2067 Discontinued
0.7164 Intermediate Similarity NPD690 Clinical (unspecified phase)
0.7162 Intermediate Similarity NPD1551 Phase 2
0.7154 Intermediate Similarity NPD1358 Approved
0.7152 Intermediate Similarity NPD2354 Approved
0.7152 Intermediate Similarity NPD7472 Approved
0.7152 Intermediate Similarity NPD3887 Approved
0.7152 Intermediate Similarity NPD7074 Phase 3
0.7143 Intermediate Similarity NPD8127 Discontinued
0.7134 Intermediate Similarity NPD7228 Approved
0.7123 Intermediate Similarity NPD447 Suspended
0.7114 Intermediate Similarity NPD5762 Approved
0.7114 Intermediate Similarity NPD2029 Clinical (unspecified phase)
0.7114 Intermediate Similarity NPD5763 Approved
0.7111 Intermediate Similarity NPD4198 Discontinued
0.7101 Intermediate Similarity NPD17 Approved
0.7099 Intermediate Similarity NPD6232 Discontinued
0.7095 Intermediate Similarity NPD1510 Phase 2
0.7092 Intermediate Similarity NPD1283 Approved
0.709 Intermediate Similarity NPD5283 Phase 1
0.7076 Intermediate Similarity NPD8397 Clinical (unspecified phase)
0.7067 Intermediate Similarity NPD970 Clinical (unspecified phase)
0.7067 Intermediate Similarity NPD1549 Phase 2
0.7066 Intermediate Similarity NPD7039 Approved
0.7066 Intermediate Similarity NPD7038 Approved
0.7063 Intermediate Similarity NPD9495 Approved
0.7063 Intermediate Similarity NPD4381 Clinical (unspecified phase)
0.7059 Intermediate Similarity NPD9493 Approved
0.705 Intermediate Similarity NPD3847 Discontinued
0.7047 Intermediate Similarity NPD2438 Suspended
0.7047 Intermediate Similarity NPD5404 Approved
0.7047 Intermediate Similarity NPD5405 Approved
0.7047 Intermediate Similarity NPD5406 Approved
0.7047 Intermediate Similarity NPD5408 Approved
0.7042 Intermediate Similarity NPD1203 Approved
0.7042 Intermediate Similarity NPD2797 Approved
0.7037 Intermediate Similarity NPD7199 Phase 2
0.703 Intermediate Similarity NPD3751 Discontinued
0.7019 Intermediate Similarity NPD919 Approved
0.7013 Intermediate Similarity NPD3536 Discontinued
0.7013 Intermediate Similarity NPD7004 Clinical (unspecified phase)
0.7013 Intermediate Similarity NPD4378 Clinical (unspecified phase)
0.7013 Intermediate Similarity NPD7422 Clinical (unspecified phase)
0.7 Intermediate Similarity NPD1550 Clinical (unspecified phase)
0.7 Intermediate Similarity NPD1552 Clinical (unspecified phase)
0.6981 Remote Similarity NPD7819 Suspended
0.698 Remote Similarity NPD7033 Discontinued
0.698 Remote Similarity NPD2799 Discontinued
0.6978 Remote Similarity NPD1778 Approved
0.6974 Remote Similarity NPD6398 Clinical (unspecified phase)
0.6972 Remote Similarity NPD3225 Approved
0.697 Remote Similarity NPD7473 Discontinued
0.6968 Remote Similarity NPD5049 Phase 3
0.6968 Remote Similarity NPD6273 Approved
0.6966 Remote Similarity NPD9537 Phase 1
0.6966 Remote Similarity NPD9536 Phase 1
0.6963 Remote Similarity NPD1241 Discontinued
0.696 Remote Similarity NPD2933 Approved
0.696 Remote Similarity NPD2934 Approved
0.6959 Remote Similarity NPD6653 Approved
0.6948 Remote Similarity NPD4357 Discontinued
0.6947 Remote Similarity NPD3134 Approved
0.6944 Remote Similarity NPD2861 Phase 2
0.6939 Remote Similarity NPD3061 Approved
0.6939 Remote Similarity NPD1240 Approved
0.6939 Remote Similarity NPD1558 Phase 1
0.6939 Remote Similarity NPD3062 Approved
0.6939 Remote Similarity NPD3059 Approved
0.6939 Remote Similarity NPD2979 Phase 3
0.6929 Remote Similarity NPD3496 Discontinued
0.6923 Remote Similarity NPD1470 Approved
0.6923 Remote Similarity NPD1164 Approved
0.6923 Remote Similarity NPD1237 Approved
0.6918 Remote Similarity NPD3268 Approved
0.6913 Remote Similarity NPD4978 Clinical (unspecified phase)
0.6906 Remote Similarity NPD5585 Approved
0.6905 Remote Similarity NPD2859 Approved
0.6905 Remote Similarity NPD2860 Approved
0.6899 Remote Similarity NPD4972 Discontinued
0.6897 Remote Similarity NPD6832 Phase 2
0.6897 Remote Similarity NPD2614 Approved
0.6894 Remote Similarity NPD7768 Phase 2
0.6892 Remote Similarity NPD274 Approved
0.6892 Remote Similarity NPD275 Approved
0.6892 Remote Similarity NPD1933 Approved
0.689 Remote Similarity NPD3787 Discontinued
0.6887 Remote Similarity NPD2353 Approved
0.6887 Remote Similarity NPD2355 Clinical (unspecified phase)
0.6886 Remote Similarity NPD7804 Clinical (unspecified phase)
0.6883 Remote Similarity NPD7440 Discontinued
0.6879 Remote Similarity NPD3687 Approved
0.6879 Remote Similarity NPD1201 Approved
0.6879 Remote Similarity NPD3686 Approved
0.6879 Remote Similarity NPD3705 Approved
0.6879 Remote Similarity NPD422 Phase 1
0.6879 Remote Similarity NPD1281 Approved
0.6875 Remote Similarity NPD8455 Phase 2
0.6875 Remote Similarity NPD1238 Approved
0.6875 Remote Similarity NPD5647 Approved
0.6875 Remote Similarity NPD3020 Approved
0.6875 Remote Similarity NPD6007 Clinical (unspecified phase)

Structure

External Identifiers

PubChem CID   25244691
ChEMBL   CHEMBL1079231
ZINC  

Physicochemical Properties

Molecular Weight:  344.09
ALogP:  -1.4454
MLogP:  2.67
XLogP:  2.828
# Rotatable Bonds:  11
Polar Surface Area:  124.29
# H-Bond Aceptor:  4
# H-Bond Donor:  4
# Rings:  2
# Heavy Atoms:  25

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
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