Natural Product: NPC229264

Natural Product ID:  NPC229264
Common Name:   Cimicifugic Acid H
IUPAC Name:   (2R,3S)-2-[(3,4-dihydroxyphenyl)methyl]-2-hydroxy-3-(4-hydroxybenzoyl)oxybutanedioic acid
Synonyms:   Cimicifugic Acid H
Molecular Formula:   C18H16O10
Standard InCHIKey:  GLMCNOVFVQRZNZ-RDTXWAMCSA-N
Standard InCHI:  InChI=1S/C18H16O10/c19-11-4-2-10(3-5-11)16(24)28-14(15(22)23)18(27,17(25)26)8-9-1-6-12(20)13(21)7-9/h1-7,14,19-21,27H,8H2,(H,22,23)(H,25,26)/t14-,18-/m1/s1
Canonical SMILES:  Oc1ccc(cc1)C(=O)O[C@@H]([C@@](C(=O)O)(Cc1ccc(c(c1)O)O)O)C(=O)O
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO30530 Cimicifuga dahurica Species Ranunculaceae Eukaryota PMID[20192237]
NPO32999 cimicifuga heracleifolia Species Ranunculaceae Eukaryota PMID[20192237]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT2 Others Unspecified IC50 = 525000 nM 8254344

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC229264 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9496 High Similarity NPC156709
0.9496 High Similarity NPC179505
0.9366 High Similarity NPC474692
0.9353 High Similarity NPC279676
0.9353 High Similarity NPC67349
0.9241 High Similarity NPC471076
0.9241 High Similarity NPC192568
0.9172 High Similarity NPC143892
0.9172 High Similarity NPC283081
0.9172 High Similarity NPC221383
0.9172 High Similarity NPC299090
0.9048 High Similarity NPC42464
0.9041 High Similarity NPC322660
0.9034 High Similarity NPC53884
0.9034 High Similarity NPC258671
0.9028 High Similarity NPC284948
0.9028 High Similarity NPC303090
0.9028 High Similarity NPC319628
0.9028 High Similarity NPC220664
0.9028 High Similarity NPC37331
0.9014 High Similarity NPC37250
0.9014 High Similarity NPC278068
0.9014 High Similarity NPC219428
0.9014 High Similarity NPC142703
0.9014 High Similarity NPC152942
0.9014 High Similarity NPC302857
0.9 High Similarity NPC106406
0.8993 High Similarity NPC5419
0.8993 High Similarity NPC61
0.8993 High Similarity NPC95498
0.8993 High Similarity NPC18074
0.8993 High Similarity NPC246566
0.8993 High Similarity NPC25581
0.8986 High Similarity NPC32197
0.8986 High Similarity NPC306343
0.898 High Similarity NPC43123
0.8966 High Similarity NPC114242
0.8966 High Similarity NPC50221
0.8966 High Similarity NPC304956
0.8958 High Similarity NPC35702
0.8958 High Similarity NPC477335
0.8958 High Similarity NPC224389
0.8958 High Similarity NPC471027
0.8958 High Similarity NPC297517
0.8958 High Similarity NPC206095
0.8958 High Similarity NPC13818
0.8951 High Similarity NPC295492
0.8951 High Similarity NPC205751
0.8951 High Similarity NPC476820
0.8951 High Similarity NPC274891
0.8951 High Similarity NPC474875
0.8951 High Similarity NPC476819
0.8951 High Similarity NPC26241
0.8951 High Similarity NPC303683
0.8929 High Similarity NPC155209
0.8929 High Similarity NPC168799
0.8921 High Similarity NPC198388
0.8921 High Similarity NPC108553
0.8897 High Similarity NPC43158
0.8897 High Similarity NPC277315
0.8897 High Similarity NPC192831
0.8897 High Similarity NPC472016
0.8897 High Similarity NPC258469
0.8851 High Similarity NPC472969
0.8849 High Similarity NPC32626
0.8849 High Similarity NPC217052
0.8849 High Similarity NPC237506
0.8849 High Similarity NPC329344
0.8836 High Similarity NPC121573
0.8836 High Similarity NPC226738
0.8836 High Similarity NPC22176
0.8836 High Similarity NPC190587
0.88 High Similarity NPC252979
0.8777 High Similarity NPC94810
0.8776 High Similarity NPC477333
0.8759 High Similarity NPC477279
0.875 High Similarity NPC24295
0.875 High Similarity NPC477299
0.875 High Similarity NPC283560
0.8732 High Similarity NPC474895
0.8732 High Similarity NPC68517
0.8716 High Similarity NPC98356
0.8716 High Similarity NPC473867
0.8707 High Similarity NPC470130
0.8707 High Similarity NPC183824
0.8699 High Similarity NPC477277
0.8699 High Similarity NPC477278
0.8693 High Similarity NPC145425
0.8693 High Similarity NPC203757
0.869 High Similarity NPC105525
0.869 High Similarity NPC75763
0.869 High Similarity NPC288452
0.869 High Similarity NPC12218
0.869 High Similarity NPC289690
0.869 High Similarity NPC225036
0.8675 High Similarity NPC243891
0.8675 High Similarity NPC140151
0.8671 High Similarity NPC233350
0.8671 High Similarity NPC70680
0.8671 High Similarity NPC182217
0.8667 High Similarity NPC476394
0.8667 High Similarity NPC98809
0.8667 High Similarity NPC75945
0.8654 High Similarity NPC112418
0.8652 High Similarity NPC318799
0.8643 High Similarity NPC226855
0.8639 High Similarity NPC285550
0.8636 High Similarity NPC134925
0.8627 High Similarity NPC281703
0.8627 High Similarity NPC125487
0.8621 High Similarity NPC239943
0.8618 High Similarity NPC75695
0.8618 High Similarity NPC227485
0.8618 High Similarity NPC267091
0.8611 High Similarity NPC156892
0.8609 High Similarity NPC280753
0.8609 High Similarity NPC259576
0.8609 High Similarity NPC44378
0.8609 High Similarity NPC221091
0.86 High Similarity NPC248257
0.86 High Similarity NPC142528
0.86 High Similarity NPC120621
0.8599 High Similarity NPC471745
0.8599 High Similarity NPC144557
0.859 High Similarity NPC471744
0.859 High Similarity NPC44507
0.8581 High Similarity NPC223335
0.8581 High Similarity NPC40920
0.8581 High Similarity NPC469615
0.8581 High Similarity NPC473090
0.8562 High Similarity NPC44730
0.8553 High Similarity NPC300329
0.8553 High Similarity NPC477334
0.8552 High Similarity NPC308976
0.8544 High Similarity NPC223006
0.8544 High Similarity NPC272750
0.8544 High Similarity NPC134047
0.8544 High Similarity NPC173729
0.8543 High Similarity NPC92117
0.8542 High Similarity NPC18646
0.8531 High Similarity NPC471749
0.8526 High Similarity NPC469654
0.8523 High Similarity NPC469683
0.8516 High Similarity NPC473275
0.8516 High Similarity NPC470896
0.8503 High Similarity NPC9218
0.8503 High Similarity NPC326065
0.8503 High Similarity NPC38473
0.85 High Similarity NPC158654
0.8497 Intermediate Similarity NPC163883
0.8497 Intermediate Similarity NPC93498
0.8493 Intermediate Similarity NPC284409
0.8491 Intermediate Similarity NPC88243
0.8489 Intermediate Similarity NPC132921
0.8487 Intermediate Similarity NPC473091
0.8483 Intermediate Similarity NPC475111
0.8477 Intermediate Similarity NPC476463
0.8477 Intermediate Similarity NPC98009
0.8477 Intermediate Similarity NPC1580
0.8471 Intermediate Similarity NPC472962
0.8471 Intermediate Similarity NPC472961
0.8467 Intermediate Similarity NPC9370
0.8467 Intermediate Similarity NPC287495
0.8462 Intermediate Similarity NPC156818
0.8462 Intermediate Similarity NPC226759
0.8462 Intermediate Similarity NPC160512
0.8462 Intermediate Similarity NPC68324
0.8462 Intermediate Similarity NPC114179
0.8462 Intermediate Similarity NPC289322
0.8462 Intermediate Similarity NPC38779
0.8456 Intermediate Similarity NPC46161
0.8456 Intermediate Similarity NPC32
0.8456 Intermediate Similarity NPC122491
0.8456 Intermediate Similarity NPC160378
0.8456 Intermediate Similarity NPC229036
0.8456 Intermediate Similarity NPC239608
0.8446 Intermediate Similarity NPC91546
0.8442 Intermediate Similarity NPC19380
0.8442 Intermediate Similarity NPC295646
0.8442 Intermediate Similarity NPC146277
0.8442 Intermediate Similarity NPC327225
0.8429 Intermediate Similarity NPC168653
0.8429 Intermediate Similarity NPC251407
0.8429 Intermediate Similarity NPC475695
0.8421 Intermediate Similarity NPC94781
0.8417 Intermediate Similarity NPC85565
0.8403 Intermediate Similarity NPC1321
0.8403 Intermediate Similarity NPC156124
0.8403 Intermediate Similarity NPC239855
0.8403 Intermediate Similarity NPC304929
0.84 Intermediate Similarity NPC108455
0.8397 Intermediate Similarity NPC104983
0.8397 Intermediate Similarity NPC471405
0.8397 Intermediate Similarity NPC291948
0.8397 Intermediate Similarity NPC471968
0.8397 Intermediate Similarity NPC474638
0.8397 Intermediate Similarity NPC88803
0.8397 Intermediate Similarity NPC250436
0.8397 Intermediate Similarity NPC300845
0.8397 Intermediate Similarity NPC471500

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC229264 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.9028 High Similarity NPD6190 Approved
0.8403 Intermediate Similarity NPD230 Phase 1
0.8397 Intermediate Similarity NPD4868 Clinical (unspecified phase)
0.828 Intermediate Similarity NPD3882 Suspended
0.8217 Intermediate Similarity NPD3817 Phase 2
0.8133 Intermediate Similarity NPD4338 Clinical (unspecified phase)
0.8113 Intermediate Similarity NPD7075 Discontinued
0.8089 Intermediate Similarity NPD1934 Approved
0.8049 Intermediate Similarity NPD3818 Discontinued
0.8038 Intermediate Similarity NPD2393 Clinical (unspecified phase)
0.8037 Intermediate Similarity NPD6168 Clinical (unspecified phase)
0.8037 Intermediate Similarity NPD6167 Clinical (unspecified phase)
0.8037 Intermediate Similarity NPD6166 Phase 2
0.8012 Intermediate Similarity NPD7993 Clinical (unspecified phase)
0.7961 Intermediate Similarity NPD4628 Phase 3
0.7959 Intermediate Similarity NPD943 Approved
0.7935 Intermediate Similarity NPD1512 Approved
0.7925 Intermediate Similarity NPD2801 Approved
0.7925 Intermediate Similarity NPD7096 Clinical (unspecified phase)
0.7922 Intermediate Similarity NPD6799 Approved
0.7914 Intermediate Similarity NPD6232 Discontinued
0.7904 Intermediate Similarity NPD6797 Phase 2
0.7881 Intermediate Similarity NPD7266 Discontinued
0.7875 Intermediate Similarity NPD5402 Approved
0.7862 Intermediate Similarity NPD6801 Discontinued
0.7857 Intermediate Similarity NPD7251 Discontinued
0.7848 Intermediate Similarity NPD4380 Phase 2
0.7823 Intermediate Similarity NPD3764 Approved
0.7806 Intermediate Similarity NPD1511 Approved
0.7786 Intermediate Similarity NPD9545 Approved
0.7778 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.7771 Intermediate Similarity NPD7473 Discontinued
0.7762 Intermediate Similarity NPD9269 Phase 2
0.7751 Intermediate Similarity NPD7685 Pre-registration
0.7738 Intermediate Similarity NPD7074 Phase 3
0.7736 Intermediate Similarity NPD6599 Discontinued
0.7706 Intermediate Similarity NPD7808 Phase 3
0.7702 Intermediate Similarity NPD1465 Phase 2
0.7697 Intermediate Similarity NPD2935 Discontinued
0.7692 Intermediate Similarity NPD6143 Clinical (unspecified phase)
0.7679 Intermediate Similarity NPD7054 Approved
0.7673 Intermediate Similarity NPD3455 Phase 2
0.7669 Intermediate Similarity NPD4381 Clinical (unspecified phase)
0.7658 Intermediate Similarity NPD5403 Approved
0.7657 Intermediate Similarity NPD7879 Clinical (unspecified phase)
0.7633 Intermediate Similarity NPD7472 Approved
0.7632 Intermediate Similarity NPD651 Clinical (unspecified phase)
0.763 Intermediate Similarity NPD8150 Discontinued
0.7619 Intermediate Similarity NPD9494 Approved
0.7547 Intermediate Similarity NPD6980 Clinical (unspecified phase)
0.7543 Intermediate Similarity NPD8397 Clinical (unspecified phase)
0.7532 Intermediate Similarity NPD4378 Clinical (unspecified phase)
0.7532 Intermediate Similarity NPD5401 Approved
0.7529 Intermediate Similarity NPD8434 Phase 2
0.7516 Intermediate Similarity NPD1510 Phase 2
0.7485 Intermediate Similarity NPD7819 Suspended
0.7484 Intermediate Similarity NPD1549 Phase 2
0.7483 Intermediate Similarity NPD9268 Approved
0.7471 Intermediate Similarity NPD5844 Phase 1
0.7471 Intermediate Similarity NPD7804 Clinical (unspecified phase)
0.7469 Intermediate Similarity NPD6385 Approved
0.7469 Intermediate Similarity NPD6386 Approved
0.7436 Intermediate Similarity NPD7421 Clinical (unspecified phase)
0.7434 Intermediate Similarity NPD447 Suspended
0.7419 Intermediate Similarity NPD1550 Clinical (unspecified phase)
0.7419 Intermediate Similarity NPD1552 Clinical (unspecified phase)
0.7417 Intermediate Similarity NPD6233 Phase 2
0.7412 Intermediate Similarity NPD3751 Discontinued
0.741 Intermediate Similarity NPD919 Approved
0.741 Intermediate Similarity NPD6234 Discontinued
0.74 Intermediate Similarity NPD3027 Phase 3
0.7389 Intermediate Similarity NPD8166 Discontinued
0.7372 Intermediate Similarity NPD970 Clinical (unspecified phase)
0.7368 Intermediate Similarity NPD7966 Clinical (unspecified phase)
0.7368 Intermediate Similarity NPD1240 Approved
0.7365 Intermediate Similarity NPD5494 Approved
0.7362 Intermediate Similarity NPD7411 Suspended
0.7351 Intermediate Similarity NPD6798 Discontinued
0.7347 Intermediate Similarity NPD4379 Clinical (unspecified phase)
0.7346 Intermediate Similarity NPD3226 Approved
0.7342 Intermediate Similarity NPD3887 Approved
0.7342 Intermediate Similarity NPD2354 Approved
0.7337 Intermediate Similarity NPD3926 Phase 2
0.732 Intermediate Similarity NPD6355 Discontinued
0.7312 Intermediate Similarity NPD2534 Approved
0.7312 Intermediate Similarity NPD7422 Clinical (unspecified phase)
0.7312 Intermediate Similarity NPD2533 Approved
0.7312 Intermediate Similarity NPD2532 Approved
0.7273 Intermediate Similarity NPD1607 Approved
0.7244 Intermediate Similarity NPD2796 Approved
0.7244 Intermediate Similarity NPD1551 Phase 2
0.7243 Intermediate Similarity NPD7435 Discontinued
0.7241 Intermediate Similarity NPD6559 Discontinued
0.7235 Intermediate Similarity NPD5242 Approved
0.7235 Intermediate Similarity NPD7184 Clinical (unspecified phase)
0.7219 Intermediate Similarity NPD1247 Approved
0.7212 Intermediate Similarity NPD37 Approved
0.7205 Intermediate Similarity NPD7410 Clinical (unspecified phase)
0.7204 Intermediate Similarity NPD8320 Phase 1
0.7204 Intermediate Similarity NPD8319 Approved
0.719 Intermediate Similarity NPD4062 Phase 3
0.7186 Intermediate Similarity NPD4966 Approved
0.7186 Intermediate Similarity NPD4967 Phase 2
0.7186 Intermediate Similarity NPD4965 Approved
0.7182 Intermediate Similarity NPD6534 Approved
0.7182 Intermediate Similarity NPD6535 Approved
0.7179 Intermediate Similarity NPD2799 Discontinued
0.7179 Intermediate Similarity NPD7033 Discontinued
0.7176 Intermediate Similarity NPD3787 Discontinued
0.7171 Intermediate Similarity NPD7095 Approved
0.717 Intermediate Similarity NPD1878 Clinical (unspecified phase)
0.717 Intermediate Similarity NPD3750 Approved
0.7162 Intermediate Similarity NPD1608 Approved
0.7159 Intermediate Similarity NPD8313 Approved
0.7159 Intermediate Similarity NPD8312 Approved
0.7153 Intermediate Similarity NPD9493 Approved
0.7143 Intermediate Similarity NPD1613 Approved
0.7143 Intermediate Similarity NPD1612 Clinical (unspecified phase)
0.7143 Intermediate Similarity NPD3749 Approved
0.7143 Intermediate Similarity NPD4060 Phase 1
0.7134 Intermediate Similarity NPD5408 Approved
0.7134 Intermediate Similarity NPD5405 Approved
0.7134 Intermediate Similarity NPD5406 Approved
0.7134 Intermediate Similarity NPD5404 Approved
0.7133 Intermediate Similarity NPD1203 Approved
0.7133 Intermediate Similarity NPD1470 Approved
0.7126 Intermediate Similarity NPD8443 Clinical (unspecified phase)
0.7126 Intermediate Similarity NPD5353 Approved
0.7124 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.7124 Intermediate Similarity NPD2313 Discontinued
0.7122 Intermediate Similarity NPD9265 Clinical (unspecified phase)
0.711 Intermediate Similarity NPD7228 Approved
0.7105 Intermediate Similarity NPD6832 Phase 2
0.7093 Intermediate Similarity NPD7852 Clinical (unspecified phase)
0.7089 Intermediate Similarity NPD2355 Clinical (unspecified phase)
0.7089 Intermediate Similarity NPD2344 Approved
0.7089 Intermediate Similarity NPD2353 Approved
0.7086 Intermediate Similarity NPD5953 Discontinued
0.7083 Intermediate Similarity NPD7768 Phase 2
0.7081 Intermediate Similarity NPD6780 Approved
0.7081 Intermediate Similarity NPD6776 Approved
0.7081 Intermediate Similarity NPD6781 Approved
0.7081 Intermediate Similarity NPD6778 Approved
0.7081 Intermediate Similarity NPD6777 Approved
0.7081 Intermediate Similarity NPD6779 Approved
0.7081 Intermediate Similarity NPD6782 Approved
0.7073 Intermediate Similarity NPD1653 Approved
0.707 Intermediate Similarity NPD1509 Clinical (unspecified phase)
0.7065 Intermediate Similarity NPD7699 Phase 2
0.7065 Intermediate Similarity NPD7700 Phase 2
0.7025 Intermediate Similarity NPD9570 Approved
0.702 Intermediate Similarity NPD1164 Approved
0.7018 Intermediate Similarity NPD7199 Phase 2
0.7018 Intermediate Similarity NPD6959 Discontinued
0.7016 Intermediate Similarity NPD7875 Clinical (unspecified phase)
0.7016 Intermediate Similarity NPD7874 Approved
0.6994 Remote Similarity NPD3688 Clinical (unspecified phase)
0.6994 Remote Similarity NPD7004 Clinical (unspecified phase)
0.6994 Remote Similarity NPD3146 Approved
0.6993 Remote Similarity NPD1529 Clinical (unspecified phase)
0.6987 Remote Similarity NPD1899 Clinical (unspecified phase)
0.6987 Remote Similarity NPD4340 Discontinued
0.6987 Remote Similarity NPD1933 Approved
0.6981 Remote Similarity NPD2346 Discontinued
0.6959 Remote Similarity NPD17 Approved
0.6957 Remote Similarity NPD4109 Clinical (unspecified phase)
0.6957 Remote Similarity NPD4110 Phase 3
0.6951 Remote Similarity NPD5049 Phase 3
0.6949 Remote Similarity NPD7038 Approved
0.6949 Remote Similarity NPD7039 Approved
0.6949 Remote Similarity NPD8368 Discontinued
0.6937 Remote Similarity NPD5958 Discontinued
0.6937 Remote Similarity NPD4534 Discontinued
0.6928 Remote Similarity NPD1530 Clinical (unspecified phase)
0.6928 Remote Similarity NPD7458 Discontinued
0.6923 Remote Similarity NPD826 Approved
0.6923 Remote Similarity NPD825 Approved
0.6919 Remote Similarity NPD8127 Discontinued
0.6919 Remote Similarity NPD8090 Clinical (unspecified phase)
0.6918 Remote Similarity NPD2438 Suspended
0.6914 Remote Similarity NPD2309 Approved
0.6909 Remote Similarity NPD920 Approved
0.6901 Remote Similarity NPD3022 Approved
0.6901 Remote Similarity NPD3021 Approved
0.6897 Remote Similarity NPD2629 Approved
0.6897 Remote Similarity NPD690 Clinical (unspecified phase)
0.689 Remote Similarity NPD642 Clinical (unspecified phase)
0.6878 Remote Similarity NPD7697 Approved
0.6878 Remote Similarity NPD7696 Phase 3
0.6878 Remote Similarity NPD7698 Approved
0.6875 Remote Similarity NPD7286 Phase 2
0.6871 Remote Similarity NPD5536 Phase 2
0.6871 Remote Similarity NPD3300 Phase 2
0.6871 Remote Similarity NPD7236 Approved
0.6867 Remote Similarity NPD1201 Approved
0.6864 Remote Similarity NPD8455 Phase 2
0.6863 Remote Similarity NPD6007 Clinical (unspecified phase)
0.6855 Remote Similarity NPD4308 Phase 3
0.6855 Remote Similarity NPD3748 Approved
0.6848 Remote Similarity NPD6273 Approved

Structure

External Identifiers

PubChem CID   46209909
ChEMBL   CHEMBL1096593
ZINC  

Physicochemical Properties

Molecular Weight:  392.07
ALogP:  -2.5327
MLogP:  2.34
XLogP:  0.475
# Rotatable Bonds:  14
Polar Surface Area:  181.82
# H-Bond Aceptor:  7
# H-Bond Donor:  6
# Rings:  2
# Heavy Atoms:  28

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs