Natural Product: NPC289690

Natural Product ID:  NPC289690
Common Name:   Clinopodic Acid B
IUPAC Name:   (2R)-2-[(E)-3-(3,4-dihydroxyphenyl)prop-2-enoyl]oxy-3-(4-hydroxy-3-methoxyphenyl)propanoic acid
Synonyms:  
Molecular Formula:   C19H18O8
Standard InCHIKey:  NFSDQICEPLDULQ-BBOMDTFKSA-N
Standard InCHI:  InChI=1S/C19H18O8/c1-26-16-9-12(3-6-14(16)21)10-17(19(24)25)27-18(23)7-4-11-2-5-13(20)15(22)8-11/h2-9,17,20-22H,10H2,1H3,(H,24,25)/b7-4+/t17-/m1/s1
Canonical SMILES:  COc1cc(ccc1O)C[C@H](C(=O)O)OC(=O)/C=C/c1ccc(c(c1)O)O
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO13475.1 Clinopodium chinense Under-species NA NA PMID[19711986]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT40 Individual Protein 72 kDa type IV collagenase Rattus norvegicus IC50 > 100000 nM 19114678

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC289690 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC288452
0.9562 High Similarity NPC160378
0.9545 High Similarity NPC168799
0.9545 High Similarity NPC155209
0.947 High Similarity NPC18074
0.947 High Similarity NPC25581
0.947 High Similarity NPC61
0.947 High Similarity NPC5419
0.9394 High Similarity NPC198388
0.9357 High Similarity NPC283081
0.9357 High Similarity NPC221383
0.9357 High Similarity NPC299090
0.9357 High Similarity NPC143892
0.9338 High Similarity NPC284409
0.9231 High Similarity NPC300329
0.9214 High Similarity NPC53884
0.9214 High Similarity NPC258671
0.9185 High Similarity NPC135127
0.9167 High Similarity NPC246566
0.9167 High Similarity NPC95498
0.9161 High Similarity NPC259576
0.9161 High Similarity NPC221091
0.9155 High Similarity NPC98009
0.9149 High Similarity NPC98356
0.9143 High Similarity NPC304956
0.9111 High Similarity NPC475468
0.9103 High Similarity NPC44730
0.9051 High Similarity NPC90431
0.9044 High Similarity NPC106406
0.9023 High Similarity NPC110313
0.9021 High Similarity NPC472969
0.9015 High Similarity NPC213552
0.9015 High Similarity NPC120225
0.9 High Similarity NPC253722
0.9 High Similarity NPC31751
0.9 High Similarity NPC253481
0.8993 High Similarity NPC322021
0.8955 High Similarity NPC83062
0.8955 High Similarity NPC241354
0.8947 High Similarity NPC123722
0.8947 High Similarity NPC276466
0.8947 High Similarity NPC5018
0.8947 High Similarity NPC151167
0.8947 High Similarity NPC123228
0.8939 High Similarity NPC280767
0.8939 High Similarity NPC289459
0.8929 High Similarity NPC38473
0.8919 High Similarity NPC473275
0.8919 High Similarity NPC470896
0.8912 High Similarity NPC477299
0.8905 High Similarity NPC471110
0.8904 High Similarity NPC163883
0.8904 High Similarity NPC93498
0.8889 High Similarity NPC172673
0.8889 High Similarity NPC1580
0.8873 High Similarity NPC473090
0.8872 High Similarity NPC90128
0.8872 High Similarity NPC179777
0.8872 High Similarity NPC303680
0.8872 High Similarity NPC84076
0.8864 High Similarity NPC246704
0.8857 High Similarity NPC179505
0.8857 High Similarity NPC156709
0.8849 High Similarity NPC126206
0.8844 High Similarity NPC146277
0.8844 High Similarity NPC19380
0.8836 High Similarity NPC243891
0.8832 High Similarity NPC307006
0.8832 High Similarity NPC129889
0.8828 High Similarity NPC98809
0.8828 High Similarity NPC476394
0.8824 High Similarity NPC318799
0.8815 High Similarity NPC304622
0.8794 High Similarity NPC477279
0.8794 High Similarity NPC326065
0.8794 High Similarity NPC100675
0.8777 High Similarity NPC471665
0.8777 High Similarity NPC471664
0.8776 High Similarity NPC476434
0.8776 High Similarity NPC267091
0.8776 High Similarity NPC75695
0.8768 High Similarity NPC4982
0.8768 High Similarity NPC176814
0.8768 High Similarity NPC5310
0.8768 High Similarity NPC300776
0.8768 High Similarity NPC68779
0.8759 High Similarity NPC471076
0.8759 High Similarity NPC239302
0.8759 High Similarity NPC192568
0.8742 High Similarity NPC44507
0.8741 High Similarity NPC469615
0.8733 High Similarity NPC223335
0.8733 High Similarity NPC40920
0.8732 High Similarity NPC477278
0.8732 High Similarity NPC140502
0.8732 High Similarity NPC67467
0.8732 High Similarity NPC477277
0.8725 High Similarity NPC145425
0.8723 High Similarity NPC205751
0.8723 High Similarity NPC476819
0.8723 High Similarity NPC476820
0.8723 High Similarity NPC303683
0.8723 High Similarity NPC474875
0.8723 High Similarity NPC295492
0.8723 High Similarity NPC26241
0.8723 High Similarity NPC474784
0.8723 High Similarity NPC147379
0.8723 High Similarity NPC274891
0.8722 High Similarity NPC60517
0.8722 High Similarity NPC146886
0.8722 High Similarity NPC20443
0.8714 High Similarity NPC279676
0.8714 High Similarity NPC281780
0.8714 High Similarity NPC67349
0.8705 High Similarity NPC113295
0.8699 High Similarity NPC478242
0.869 High Similarity NPC229264
0.8681 High Similarity NPC223185
0.8681 High Similarity NPC469683
0.8675 High Similarity NPC469654
0.8671 High Similarity NPC258469
0.8671 High Similarity NPC319628
0.8671 High Similarity NPC472016
0.8671 High Similarity NPC43158
0.8671 High Similarity NPC277315
0.8671 High Similarity NPC273657
0.8671 High Similarity NPC470811
0.8671 High Similarity NPC284948
0.8671 High Similarity NPC106920
0.8671 High Similarity NPC37331
0.8671 High Similarity NPC477697
0.8671 High Similarity NPC220664
0.8671 High Similarity NPC303090
0.8671 High Similarity NPC192831
0.8671 High Similarity NPC477696
0.8667 High Similarity NPC281020
0.8658 High Similarity NPC469888
0.8657 High Similarity NPC53305
0.8657 High Similarity NPC257589
0.8652 High Similarity NPC37250
0.8652 High Similarity NPC152942
0.8652 High Similarity NPC278068
0.8652 High Similarity NPC219428
0.8652 High Similarity NPC302857
0.8652 High Similarity NPC142703
0.8647 High Similarity NPC257976
0.8647 High Similarity NPC164778
0.8647 High Similarity NPC4181
0.8647 High Similarity NPC242372
0.8643 High Similarity NPC471988
0.8639 High Similarity NPC32197
0.8639 High Similarity NPC473091
0.8636 High Similarity NPC194416
0.8636 High Similarity NPC147654
0.8636 High Similarity NPC177291
0.8636 High Similarity NPC472271
0.8633 High Similarity NPC237594
0.8633 High Similarity NPC249791
0.8633 High Similarity NPC476387
0.8633 High Similarity NPC119060
0.8633 High Similarity NPC67247
0.8621 High Similarity NPC9370
0.8621 High Similarity NPC287495
0.8618 High Similarity NPC301089
0.8613 High Similarity NPC275724
0.8613 High Similarity NPC65935
0.8613 High Similarity NPC137427
0.8613 High Similarity NPC244246
0.8613 High Similarity NPC123196
0.8613 High Similarity NPC319282
0.8613 High Similarity NPC311419
0.8613 High Similarity NPC215941
0.8603 High Similarity NPC226661
0.8601 High Similarity NPC224389
0.8601 High Similarity NPC477335
0.8601 High Similarity NPC13818
0.8601 High Similarity NPC297517
0.8601 High Similarity NPC35702
0.8601 High Similarity NPC206095
0.8601 High Similarity NPC471027
0.86 High Similarity NPC38699
0.8593 High Similarity NPC276014
0.8593 High Similarity NPC92207
0.8593 High Similarity NPC127937
0.8582 High Similarity NPC273686
0.8582 High Similarity NPC312404
0.8581 High Similarity NPC32079
0.8571 High Similarity NPC134047
0.8571 High Similarity NPC223006
0.8571 High Similarity NPC272750
0.8571 High Similarity NPC114298
0.8571 High Similarity NPC173729
0.8571 High Similarity NPC139519
0.8571 High Similarity NPC111785
0.8561 High Similarity NPC159418
0.8561 High Similarity NPC470848
0.8561 High Similarity NPC470849
0.8561 High Similarity NPC204466
0.8561 High Similarity NPC283823
0.8552 High Similarity NPC274960

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC289690 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8671 High Similarity NPD6190 Approved
0.8507 High Similarity NPD4379 Clinical (unspecified phase)
0.8301 Intermediate Similarity NPD3882 Suspended
0.8299 Intermediate Similarity NPD6143 Clinical (unspecified phase)
0.8235 Intermediate Similarity NPD3817 Phase 2
0.8219 Intermediate Similarity NPD4628 Phase 3
0.8214 Intermediate Similarity NPD6798 Discontinued
0.8182 Intermediate Similarity NPD4868 Clinical (unspecified phase)
0.8169 Intermediate Similarity NPD6355 Discontinued
0.8156 Intermediate Similarity NPD4062 Phase 3
0.8156 Intermediate Similarity NPD6233 Phase 2
0.8143 Intermediate Similarity NPD3027 Phase 3
0.8138 Intermediate Similarity NPD7266 Discontinued
0.8013 Intermediate Similarity NPD7075 Discontinued
0.8 Intermediate Similarity NPD9494 Approved
0.7987 Intermediate Similarity NPD1934 Approved
0.7985 Intermediate Similarity NPD5536 Phase 2
0.7972 Intermediate Similarity NPD4060 Phase 1
0.7962 Intermediate Similarity NPD6234 Discontinued
0.7937 Intermediate Similarity NPD6167 Clinical (unspecified phase)
0.7937 Intermediate Similarity NPD6168 Clinical (unspecified phase)
0.7937 Intermediate Similarity NPD6166 Phase 2
0.7933 Intermediate Similarity NPD6799 Approved
0.7927 Intermediate Similarity NPD4338 Clinical (unspecified phase)
0.7917 Intermediate Similarity NPD230 Phase 1
0.7892 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.7887 Intermediate Similarity NPD7095 Approved
0.7852 Intermediate Similarity NPD4109 Clinical (unspecified phase)
0.7852 Intermediate Similarity NPD4110 Phase 3
0.7821 Intermediate Similarity NPD7096 Clinical (unspecified phase)
0.7821 Intermediate Similarity NPD2393 Clinical (unspecified phase)
0.7821 Intermediate Similarity NPD2801 Approved
0.7805 Intermediate Similarity NPD7993 Clinical (unspecified phase)
0.7805 Intermediate Similarity NPD6797 Phase 2
0.7803 Intermediate Similarity NPD228 Approved
0.7793 Intermediate Similarity NPD4340 Discontinued
0.7792 Intermediate Similarity NPD3455 Phase 2
0.7778 Intermediate Similarity NPD5403 Approved
0.7778 Intermediate Similarity NPD6980 Clinical (unspecified phase)
0.7771 Intermediate Similarity NPD5402 Approved
0.7764 Intermediate Similarity NPD7184 Clinical (unspecified phase)
0.7758 Intermediate Similarity NPD7685 Pre-registration
0.7758 Intermediate Similarity NPD7251 Discontinued
0.7756 Intermediate Similarity NPD37 Approved
0.7756 Intermediate Similarity NPD6801 Discontinued
0.7733 Intermediate Similarity NPD8166 Discontinued
0.773 Intermediate Similarity NPD3818 Discontinued
0.7727 Intermediate Similarity NPD1653 Approved
0.7722 Intermediate Similarity NPD4965 Approved
0.7722 Intermediate Similarity NPD4967 Phase 2
0.7722 Intermediate Similarity NPD4966 Approved
0.7718 Intermediate Similarity NPD4534 Discontinued
0.7712 Intermediate Similarity NPD1512 Approved
0.7711 Intermediate Similarity NPD7808 Phase 3
0.7708 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.7703 Intermediate Similarity NPD2935 Discontinued
0.7692 Intermediate Similarity NPD6386 Approved
0.7692 Intermediate Similarity NPD6385 Approved
0.7683 Intermediate Similarity NPD7054 Approved
0.7667 Intermediate Similarity NPD7421 Clinical (unspecified phase)
0.7664 Intermediate Similarity NPD9545 Approved
0.7647 Intermediate Similarity NPD5401 Approved
0.7647 Intermediate Similarity NPD3146 Approved
0.7647 Intermediate Similarity NPD3688 Clinical (unspecified phase)
0.7643 Intermediate Similarity NPD1608 Approved
0.764 Intermediate Similarity NPD8127 Discontinued
0.7636 Intermediate Similarity NPD7074 Phase 3
0.7636 Intermediate Similarity NPD7472 Approved
0.7628 Intermediate Similarity NPD6599 Discontinued
0.7622 Intermediate Similarity NPD7228 Approved
0.7603 Intermediate Similarity NPD1613 Approved
0.7603 Intermediate Similarity NPD1612 Clinical (unspecified phase)
0.76 Intermediate Similarity NPD5958 Discontinued
0.7595 Intermediate Similarity NPD1465 Phase 2
0.7593 Intermediate Similarity NPD6232 Discontinued
0.7582 Intermediate Similarity NPD1511 Approved
0.7576 Intermediate Similarity NPD5844 Phase 1
0.7556 Intermediate Similarity NPD5283 Phase 1
0.7551 Intermediate Similarity NPD447 Suspended
0.7544 Intermediate Similarity NPD8397 Clinical (unspecified phase)
0.7536 Intermediate Similarity NPD1894 Discontinued
0.7531 Intermediate Similarity NPD7199 Phase 2
0.7516 Intermediate Similarity NPD4380 Phase 2
0.75 Intermediate Similarity NPD1358 Approved
0.7467 Intermediate Similarity NPD1501 Clinical (unspecified phase)
0.7467 Intermediate Similarity NPD2438 Suspended
0.7466 Intermediate Similarity NPD3764 Approved
0.7455 Intermediate Similarity NPD7473 Discontinued
0.7451 Intermediate Similarity NPD2354 Approved
0.7451 Intermediate Similarity NPD3887 Approved
0.7448 Intermediate Similarity NPD1529 Clinical (unspecified phase)
0.7447 Intermediate Similarity NPD1535 Discovery
0.744 Intermediate Similarity NPD7038 Approved
0.744 Intermediate Similarity NPD7039 Approved
0.7429 Intermediate Similarity NPD17 Approved
0.7417 Intermediate Similarity NPD5763 Approved
0.7417 Intermediate Similarity NPD5762 Approved
0.7413 Intermediate Similarity NPD1283 Approved
0.7407 Intermediate Similarity NPD919 Approved
0.7394 Intermediate Similarity NPD1481 Phase 2
0.7386 Intermediate Similarity NPD3750 Approved
0.7379 Intermediate Similarity NPD1530 Clinical (unspecified phase)
0.7376 Intermediate Similarity NPD3847 Discontinued
0.7375 Intermediate Similarity NPD7819 Suspended
0.7368 Intermediate Similarity NPD970 Clinical (unspecified phase)
0.7365 Intermediate Similarity NPD1558 Phase 1
0.7361 Intermediate Similarity NPD2797 Approved
0.7355 Intermediate Similarity NPD4357 Discontinued
0.7351 Intermediate Similarity NPD1551 Phase 2
0.7346 Intermediate Similarity NPD4381 Clinical (unspecified phase)
0.7343 Intermediate Similarity NPD2982 Phase 2
0.7343 Intermediate Similarity NPD2983 Phase 2
0.7329 Intermediate Similarity NPD6832 Phase 2
0.7324 Intermediate Similarity NPD3705 Approved
0.7315 Intermediate Similarity NPD1933 Approved
0.7308 Intermediate Similarity NPD3536 Discontinued
0.7308 Intermediate Similarity NPD4378 Clinical (unspecified phase)
0.7305 Intermediate Similarity NPD1778 Approved
0.7299 Intermediate Similarity NPD1241 Discontinued
0.7293 Intermediate Similarity NPD3134 Approved
0.7285 Intermediate Similarity NPD7033 Discontinued
0.7285 Intermediate Similarity NPD1510 Phase 2
0.7285 Intermediate Similarity NPD2799 Discontinued
0.7278 Intermediate Similarity NPD3687 Approved
0.7278 Intermediate Similarity NPD3686 Approved
0.7273 Intermediate Similarity NPD2981 Phase 2
0.7273 Intermediate Similarity NPD6398 Clinical (unspecified phase)
0.7267 Intermediate Similarity NPD6653 Approved
0.7262 Intermediate Similarity NPD7804 Clinical (unspecified phase)
0.7261 Intermediate Similarity NPD6273 Approved
0.7261 Intermediate Similarity NPD5049 Phase 3
0.726 Intermediate Similarity NPD3018 Phase 2
0.7259 Intermediate Similarity NPD3021 Approved
0.7259 Intermediate Similarity NPD3022 Approved
0.7255 Intermediate Similarity NPD1549 Phase 2
0.7254 Intermediate Similarity NPD3496 Discontinued
0.725 Intermediate Similarity NPD7411 Suspended
0.7248 Intermediate Similarity NPD826 Approved
0.7248 Intermediate Similarity NPD3619 Clinical (unspecified phase)
0.7248 Intermediate Similarity NPD1240 Approved
0.7248 Intermediate Similarity NPD2979 Phase 3
0.7248 Intermediate Similarity NPD3620 Phase 2
0.7248 Intermediate Similarity NPD825 Approved
0.7241 Intermediate Similarity NPD1203 Approved
0.7235 Intermediate Similarity NPD6559 Discontinued
0.7234 Intermediate Similarity NPD1357 Approved
0.7234 Intermediate Similarity NPD5585 Approved
0.723 Intermediate Similarity NPD3268 Approved
0.7229 Intermediate Similarity NPD5242 Approved
0.7222 Intermediate Similarity NPD5353 Approved
0.7208 Intermediate Similarity NPD3060 Approved
0.7203 Intermediate Similarity NPD422 Phase 1
0.7203 Intermediate Similarity NPD1281 Approved
0.7202 Intermediate Similarity NPD3751 Discontinued
0.7197 Intermediate Similarity NPD7004 Clinical (unspecified phase)
0.7192 Intermediate Similarity NPD5647 Approved
0.719 Intermediate Similarity NPD1552 Clinical (unspecified phase)
0.719 Intermediate Similarity NPD2353 Approved
0.719 Intermediate Similarity NPD2355 Clinical (unspecified phase)
0.719 Intermediate Similarity NPD1550 Clinical (unspecified phase)
0.7188 Intermediate Similarity NPD4972 Discontinued
0.7183 Intermediate Similarity NPD4626 Approved
0.7178 Intermediate Similarity NPD7768 Phase 2
0.7172 Intermediate Similarity NPD3225 Approved
0.7161 Intermediate Similarity NPD1878 Clinical (unspecified phase)
0.716 Intermediate Similarity NPD8455 Phase 2
0.716 Intermediate Similarity NPD1006 Clinical (unspecified phase)
0.7159 Intermediate Similarity NPD7879 Clinical (unspecified phase)
0.7153 Intermediate Similarity NPD9269 Phase 2
0.7152 Intermediate Similarity NPD5494 Approved
0.7152 Intermediate Similarity NPD1607 Approved
0.7143 Intermediate Similarity NPD6873 Phase 2
0.7143 Intermediate Similarity NPD2861 Phase 2
0.7135 Intermediate Similarity NPD7240 Approved
0.7133 Intermediate Similarity NPD943 Approved
0.7126 Intermediate Similarity NPD3926 Phase 2
0.7125 Intermediate Similarity NPD3226 Approved
0.7125 Intermediate Similarity NPD7458 Discontinued
0.7124 Intermediate Similarity NPD2796 Approved
0.7124 Intermediate Similarity NPD6032 Approved
0.7122 Intermediate Similarity NPD690 Clinical (unspecified phase)
0.7122 Intermediate Similarity NPD2629 Approved
0.7113 Intermediate Similarity NPD1651 Approved
0.7113 Intermediate Similarity NPD5691 Approved
0.711 Intermediate Similarity NPD7090 Clinical (unspecified phase)
0.7108 Intermediate Similarity NPD2821 Approved
0.7105 Intermediate Similarity NPD7097 Phase 1
0.7101 Intermediate Similarity NPD5535 Approved
0.7101 Intermediate Similarity NPD2163 Approved
0.7101 Intermediate Similarity NPD7843 Approved
0.7097 Intermediate Similarity NPD4236 Phase 3
0.7097 Intermediate Similarity NPD4237 Approved
0.7095 Intermediate Similarity NPD2614 Approved
0.7086 Intermediate Similarity NPD555 Phase 2
0.7086 Intermediate Similarity NPD1899 Clinical (unspecified phase)
0.7081 Intermediate Similarity NPD7028 Phase 2
0.7071 Intermediate Similarity NPD7157 Approved
0.707 Intermediate Similarity NPD7440 Discontinued
0.7066 Intermediate Similarity NPD3787 Discontinued
0.7059 Intermediate Similarity NPD3748 Approved

Structure

External Identifiers

PubChem CID   44254692
ChEMBL   CHEMBL1080778
ZINC  

Physicochemical Properties

Molecular Weight:  374.10
ALogP:  -1.4972
MLogP:  2.67
XLogP:  2.173
# Rotatable Bonds:  13
Polar Surface Area:  133.52
# H-Bond Aceptor:  4
# H-Bond Donor:  4
# Rings:  2
# Heavy Atoms:  27

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs