Natural Product: NPC156709

Natural Product ID:  NPC156709
Common Name:   Cimicifugic Acid C
IUPAC Name:   (2R,3S)-2-[(3,4-dihydroxyphenyl)methyl]-2-hydroxy-3-[(E)-3-(4-hydroxyphenyl)prop-2-enoyl]oxybutanedioic acid
Synonyms:   Cimicifugic Acid C
Molecular Formula:   C20H18O10
Standard InCHIKey:  NIDSBIYSGNHVDL-ZUVWSUMTSA-N
Standard InCHI:  InChI=1S/C20H18O10/c21-13-5-1-11(2-6-13)4-8-16(24)30-17(18(25)26)20(29,19(27)28)10-12-3-7-14(22)15(23)9-12/h1-9,17,21-23,29H,10H2,(H,25,26)(H,27,28)/b8-4+/t17-,20-/m1/s1
Canonical SMILES:  O=C(O[C@@H]([C@@](C(=O)O)(Cc1ccc(c(c1)O)O)O)C(=O)O)/C=C/c1ccc(cc1)O
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO30530 Cimicifuga dahurica Species Ranunculaceae Eukaryota PMID[20192237]
NPO32999 cimicifuga heracleifolia Species Ranunculaceae Eukaryota PMID[20192237]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT2 Others Unspecified IC50 = 251000 nM 20608716

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC156709 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC179505
0.9848 High Similarity NPC279676
0.9848 High Similarity NPC67349
0.9496 High Similarity NPC143892
0.9496 High Similarity NPC299090
0.9496 High Similarity NPC221383
0.9496 High Similarity NPC283081
0.9496 High Similarity NPC229264
0.9394 High Similarity NPC108553
0.9353 High Similarity NPC258671
0.9353 High Similarity NPC53884
0.9323 High Similarity NPC25581
0.9323 High Similarity NPC61
0.9323 High Similarity NPC5419
0.9323 High Similarity NPC18074
0.9318 High Similarity NPC329344
0.9318 High Similarity NPC237506
0.9318 High Similarity NPC217052
0.9318 High Similarity NPC32626
0.9281 High Similarity NPC304956
0.9254 High Similarity NPC155209
0.9254 High Similarity NPC168799
0.9248 High Similarity NPC198388
0.9185 High Similarity NPC106406
0.9167 High Similarity NPC246566
0.9167 High Similarity NPC95498
0.9161 High Similarity NPC32197
0.9155 High Similarity NPC192568
0.9155 High Similarity NPC471076
0.9143 High Similarity NPC474692
0.9085 High Similarity NPC322660
0.9071 High Similarity NPC220664
0.9071 High Similarity NPC319628
0.9071 High Similarity NPC37331
0.9071 High Similarity NPC284948
0.9071 High Similarity NPC303090
0.9058 High Similarity NPC37250
0.9058 High Similarity NPC278068
0.9058 High Similarity NPC219428
0.9058 High Similarity NPC142703
0.9058 High Similarity NPC152942
0.9058 High Similarity NPC302857
0.9 High Similarity NPC477335
0.9 High Similarity NPC224389
0.9 High Similarity NPC471027
0.9 High Similarity NPC35702
0.9 High Similarity NPC13818
0.9 High Similarity NPC206095
0.9 High Similarity NPC297517
0.8993 High Similarity NPC295492
0.8993 High Similarity NPC474875
0.8993 High Similarity NPC274891
0.8993 High Similarity NPC476820
0.8993 High Similarity NPC26241
0.8993 High Similarity NPC476819
0.8993 High Similarity NPC303683
0.8993 High Similarity NPC205751
0.8939 High Similarity NPC132921
0.8936 High Similarity NPC277315
0.8936 High Similarity NPC258469
0.8936 High Similarity NPC472016
0.8936 High Similarity NPC43158
0.8936 High Similarity NPC192831
0.8912 High Similarity NPC477299
0.8873 High Similarity NPC183824
0.8872 High Similarity NPC251407
0.8872 High Similarity NPC475695
0.8872 High Similarity NPC168653
0.8857 High Similarity NPC289690
0.8857 High Similarity NPC288452
0.8832 High Similarity NPC471749
0.8824 High Similarity NPC318799
0.8811 High Similarity NPC477333
0.8803 High Similarity NPC285550
0.8794 High Similarity NPC477279
0.8794 High Similarity NPC38473
0.8786 High Similarity NPC24295
0.8786 High Similarity NPC283560
0.8768 High Similarity NPC68517
0.8768 High Similarity NPC474895
0.8767 High Similarity NPC221091
0.8767 High Similarity NPC259576
0.8742 High Similarity NPC44507
0.8733 High Similarity NPC223335
0.8733 High Similarity NPC40920
0.8732 High Similarity NPC477278
0.8732 High Similarity NPC477277
0.8714 High Similarity NPC308976
0.8707 High Similarity NPC300329
0.8705 High Similarity NPC70680
0.8705 High Similarity NPC233350
0.8705 High Similarity NPC182217
0.8675 High Similarity NPC469654
0.8662 High Similarity NPC9218
0.863 High Similarity NPC1580
0.8621 High Similarity NPC98356
0.8611 High Similarity NPC160378
0.8591 High Similarity NPC475595
0.8591 High Similarity NPC266084
0.8591 High Similarity NPC475162
0.8591 High Similarity NPC473544
0.8591 High Similarity NPC83663
0.8591 High Similarity NPC475216
0.8591 High Similarity NPC475145
0.8581 High Similarity NPC477334
0.8571 High Similarity NPC42464
0.854 High Similarity NPC214246
0.8514 High Similarity NPC306343
0.8503 High Similarity NPC28776
0.8503 High Similarity NPC473138
0.8503 High Similarity NPC43123
0.8496 Intermediate Similarity NPC147654
0.8496 Intermediate Similarity NPC472271
0.8483 Intermediate Similarity NPC50221
0.8483 Intermediate Similarity NPC470130
0.8483 Intermediate Similarity NPC114242
0.8472 Intermediate Similarity NPC253722
0.8472 Intermediate Similarity NPC31751
0.8472 Intermediate Similarity NPC253481
0.8467 Intermediate Similarity NPC87403
0.8467 Intermediate Similarity NPC44730
0.8456 Intermediate Similarity NPC147192
0.8456 Intermediate Similarity NPC118584
0.8444 Intermediate Similarity NPC288945
0.8433 Intermediate Similarity NPC86900
0.8425 Intermediate Similarity NPC223185
0.8425 Intermediate Similarity NPC228940
0.8421 Intermediate Similarity NPC470848
0.8421 Intermediate Similarity NPC470849
0.8421 Intermediate Similarity NPC473275
0.8421 Intermediate Similarity NPC470896
0.8409 Intermediate Similarity NPC263386
0.8409 Intermediate Similarity NPC141791
0.8403 Intermediate Similarity NPC100675
0.84 Intermediate Similarity NPC93498
0.84 Intermediate Similarity NPC106818
0.84 Intermediate Similarity NPC163883
0.8392 Intermediate Similarity NPC220942
0.8392 Intermediate Similarity NPC284409
0.8387 Intermediate Similarity NPC144557
0.8382 Intermediate Similarity NPC67951
0.838 Intermediate Similarity NPC90431
0.838 Intermediate Similarity NPC470572
0.8378 Intermediate Similarity NPC472969
0.8378 Intermediate Similarity NPC98009
0.837 Intermediate Similarity NPC285345
0.837 Intermediate Similarity NPC14141
0.8369 Intermediate Similarity NPC34293
0.8369 Intermediate Similarity NPC135127
0.8369 Intermediate Similarity NPC287597
0.8369 Intermediate Similarity NPC886
0.8356 Intermediate Similarity NPC121573
0.8356 Intermediate Similarity NPC122491
0.8356 Intermediate Similarity NPC22176
0.8356 Intermediate Similarity NPC226738
0.8356 Intermediate Similarity NPC190587
0.8356 Intermediate Similarity NPC32
0.8344 Intermediate Similarity NPC327225
0.8344 Intermediate Similarity NPC146277
0.8344 Intermediate Similarity NPC19380
0.8333 Intermediate Similarity NPC173729
0.8333 Intermediate Similarity NPC223006
0.8333 Intermediate Similarity NPC322021
0.8333 Intermediate Similarity NPC147379
0.8333 Intermediate Similarity NPC134047
0.8333 Intermediate Similarity NPC471875
0.8333 Intermediate Similarity NPC252979
0.8333 Intermediate Similarity NPC474784
0.8333 Intermediate Similarity NPC272750
0.831 Intermediate Similarity NPC180171
0.831 Intermediate Similarity NPC158325
0.831 Intermediate Similarity NPC311742
0.831 Intermediate Similarity NPC123988
0.831 Intermediate Similarity NPC470990
0.831 Intermediate Similarity NPC103398
0.831 Intermediate Similarity NPC113295
0.8309 Intermediate Similarity NPC85565
0.8298 Intermediate Similarity NPC475468
0.8284 Intermediate Similarity NPC98305
0.8278 Intermediate Similarity NPC476434
0.8273 Intermediate Similarity NPC94810
0.8271 Intermediate Similarity NPC70084
0.8267 Intermediate Similarity NPC280753
0.8267 Intermediate Similarity NPC44378
0.8267 Intermediate Similarity NPC12006
0.8264 Intermediate Similarity NPC328273
0.8264 Intermediate Similarity NPC321184
0.8264 Intermediate Similarity NPC321638
0.8264 Intermediate Similarity NPC171134
0.8248 Intermediate Similarity NPC197832
0.8243 Intermediate Similarity NPC473867
0.8239 Intermediate Similarity NPC248150
0.8235 Intermediate Similarity NPC38699
0.8235 Intermediate Similarity NPC203757
0.8235 Intermediate Similarity NPC145425
0.8227 Intermediate Similarity NPC323379
0.8227 Intermediate Similarity NPC327204
0.8222 Intermediate Similarity NPC322332
0.8212 Intermediate Similarity NPC243891
0.8212 Intermediate Similarity NPC140151

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC156709 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.9071 High Similarity NPD6190 Approved
0.8138 Intermediate Similarity NPD7266 Discontinued
0.7949 Intermediate Similarity NPD4868 Clinical (unspecified phase)
0.7917 Intermediate Similarity NPD230 Phase 1
0.7834 Intermediate Similarity NPD3882 Suspended
0.7771 Intermediate Similarity NPD3817 Phase 2
0.7733 Intermediate Similarity NPD8166 Discontinued
0.7724 Intermediate Similarity NPD943 Approved
0.7711 Intermediate Similarity NPD4338 Clinical (unspecified phase)
0.7673 Intermediate Similarity NPD7075 Discontinued
0.7658 Intermediate Similarity NPD5402 Approved
0.7655 Intermediate Similarity NPD6233 Phase 2
0.7643 Intermediate Similarity NPD1934 Approved
0.7622 Intermediate Similarity NPD3818 Discontinued
0.7607 Intermediate Similarity NPD6168 Clinical (unspecified phase)
0.7607 Intermediate Similarity NPD6167 Clinical (unspecified phase)
0.7607 Intermediate Similarity NPD6166 Phase 2
0.7595 Intermediate Similarity NPD2393 Clinical (unspecified phase)
0.759 Intermediate Similarity NPD7993 Clinical (unspecified phase)
0.7589 Intermediate Similarity NPD4379 Clinical (unspecified phase)
0.7586 Intermediate Similarity NPD6798 Discontinued
0.7586 Intermediate Similarity NPD3764 Approved
0.7584 Intermediate Similarity NPD2935 Discontinued
0.7574 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.7564 Intermediate Similarity NPD3455 Phase 2
0.7551 Intermediate Similarity NPD6355 Discontinued
0.7518 Intermediate Similarity NPD9269 Phase 2
0.7517 Intermediate Similarity NPD3027 Phase 3
0.7516 Intermediate Similarity NPD6234 Discontinued
0.75 Intermediate Similarity NPD4628 Phase 3
0.7485 Intermediate Similarity NPD6232 Discontinued
0.7485 Intermediate Similarity NPD6797 Phase 2
0.7484 Intermediate Similarity NPD1512 Approved
0.7484 Intermediate Similarity NPD7096 Clinical (unspecified phase)
0.7484 Intermediate Similarity NPD2801 Approved
0.7468 Intermediate Similarity NPD6799 Approved
0.7468 Intermediate Similarity NPD6143 Clinical (unspecified phase)
0.744 Intermediate Similarity NPD7251 Discontinued
0.7436 Intermediate Similarity NPD5403 Approved
0.7421 Intermediate Similarity NPD6801 Discontinued
0.7415 Intermediate Similarity NPD4062 Phase 3
0.7405 Intermediate Similarity NPD4380 Phase 2
0.74 Intermediate Similarity NPD651 Clinical (unspecified phase)
0.7397 Intermediate Similarity NPD7095 Approved
0.7365 Intermediate Similarity NPD7966 Clinical (unspecified phase)
0.7365 Intermediate Similarity NPD4060 Phase 1
0.7355 Intermediate Similarity NPD1511 Approved
0.7351 Intermediate Similarity NPD9570 Approved
0.7349 Intermediate Similarity NPD7473 Discontinued
0.7337 Intermediate Similarity NPD7685 Pre-registration
0.7321 Intermediate Similarity NPD7074 Phase 3
0.7315 Intermediate Similarity NPD447 Suspended
0.7312 Intermediate Similarity NPD37 Approved
0.7308 Intermediate Similarity NPD7422 Clinical (unspecified phase)
0.7308 Intermediate Similarity NPD5401 Approved
0.7305 Intermediate Similarity NPD3751 Discontinued
0.7296 Intermediate Similarity NPD6599 Discontinued
0.7294 Intermediate Similarity NPD7808 Phase 3
0.7286 Intermediate Similarity NPD9545 Approved
0.7284 Intermediate Similarity NPD4965 Approved
0.7284 Intermediate Similarity NPD4967 Phase 2
0.7284 Intermediate Similarity NPD4966 Approved
0.7267 Intermediate Similarity NPD1465 Phase 2
0.7262 Intermediate Similarity NPD7054 Approved
0.726 Intermediate Similarity NPD9494 Approved
0.7259 Intermediate Similarity NPD3022 Approved
0.7259 Intermediate Similarity NPD3021 Approved
0.7257 Intermediate Similarity NPD7879 Clinical (unspecified phase)
0.7248 Intermediate Similarity NPD1612 Clinical (unspecified phase)
0.7248 Intermediate Similarity NPD1613 Approved
0.7248 Intermediate Similarity NPD826 Approved
0.7248 Intermediate Similarity NPD825 Approved
0.7241 Intermediate Similarity NPD8397 Clinical (unspecified phase)
0.7239 Intermediate Similarity NPD4381 Clinical (unspecified phase)
0.7234 Intermediate Similarity NPD9268 Approved
0.7225 Intermediate Similarity NPD8150 Discontinued
0.7219 Intermediate Similarity NPD7472 Approved
0.7202 Intermediate Similarity NPD7228 Approved
0.717 Intermediate Similarity NPD1653 Approved
0.7161 Intermediate Similarity NPD4109 Clinical (unspecified phase)
0.7161 Intermediate Similarity NPD4110 Phase 3
0.7143 Intermediate Similarity NPD5958 Discontinued
0.7143 Intermediate Similarity NPD4534 Discontinued
0.7132 Intermediate Similarity NPD2067 Discontinued
0.7126 Intermediate Similarity NPD8434 Phase 2
0.7126 Intermediate Similarity NPD7184 Clinical (unspecified phase)
0.7124 Intermediate Similarity NPD5406 Approved
0.7124 Intermediate Similarity NPD5404 Approved
0.7124 Intermediate Similarity NPD5405 Approved
0.7124 Intermediate Similarity NPD5408 Approved
0.7123 Intermediate Similarity NPD1470 Approved
0.7122 Intermediate Similarity NPD2629 Approved
0.7108 Intermediate Similarity NPD8127 Discontinued
0.7107 Intermediate Similarity NPD6980 Clinical (unspecified phase)
0.7095 Intermediate Similarity NPD1529 Clinical (unspecified phase)
0.7092 Intermediate Similarity NPD5536 Phase 2
0.7089 Intermediate Similarity NPD4378 Clinical (unspecified phase)
0.7086 Intermediate Similarity NPD4340 Discontinued
0.7066 Intermediate Similarity NPD3787 Discontinued
0.7059 Intermediate Similarity NPD5844 Phase 1
0.7059 Intermediate Similarity NPD7033 Discontinued
0.7059 Intermediate Similarity NPD2799 Discontinued
0.7059 Intermediate Similarity NPD1510 Phase 2
0.7059 Intermediate Similarity NPD7804 Clinical (unspecified phase)
0.7055 Intermediate Similarity NPD7819 Suspended
0.7051 Intermediate Similarity NPD3400 Discontinued
0.7037 Intermediate Similarity NPD6386 Approved
0.7037 Intermediate Similarity NPD6385 Approved
0.7035 Intermediate Similarity NPD6559 Discontinued
0.7032 Intermediate Similarity NPD1549 Phase 2
0.7027 Intermediate Similarity NPD1530 Clinical (unspecified phase)
0.7021 Intermediate Similarity NPD9493 Approved
0.7019 Intermediate Similarity NPD3226 Approved
0.7013 Intermediate Similarity NPD2438 Suspended
0.7013 Intermediate Similarity NPD1551 Phase 2
0.7007 Intermediate Similarity NPD1164 Approved
0.7007 Intermediate Similarity NPD1203 Approved
0.7006 Intermediate Similarity NPD3887 Approved
0.7006 Intermediate Similarity NPD2354 Approved
0.7 Intermediate Similarity NPD690 Clinical (unspecified phase)
0.7 Intermediate Similarity NPD2313 Discontinued
0.7 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.6993 Remote Similarity NPD7097 Phase 1
0.6988 Remote Similarity NPD919 Approved
0.6987 Remote Similarity NPD7421 Clinical (unspecified phase)
0.698 Remote Similarity NPD6832 Phase 2
0.6974 Remote Similarity NPD555 Phase 2
0.6968 Remote Similarity NPD1552 Clinical (unspecified phase)
0.6968 Remote Similarity NPD1550 Clinical (unspecified phase)
0.6966 Remote Similarity NPD1535 Discovery
0.6959 Remote Similarity NPD257 Approved
0.6959 Remote Similarity NPD258 Approved
0.6954 Remote Similarity NPD8312 Approved
0.6954 Remote Similarity NPD6663 Approved
0.6954 Remote Similarity NPD8313 Approved
0.695 Remote Similarity NPD4198 Discontinued
0.6946 Remote Similarity NPD5494 Approved
0.6943 Remote Similarity NPD1878 Clinical (unspecified phase)
0.6943 Remote Similarity NPD3750 Approved
0.6933 Remote Similarity NPD7411 Suspended
0.6923 Remote Similarity NPD3926 Phase 2
0.6923 Remote Similarity NPD1894 Discontinued
0.6923 Remote Similarity NPD970 Clinical (unspecified phase)
0.6918 Remote Similarity NPD1608 Approved
0.6918 Remote Similarity NPD1481 Phase 2
0.6913 Remote Similarity NPD5736 Approved
0.6908 Remote Similarity NPD1240 Approved
0.6906 Remote Similarity NPD228 Approved
0.6905 Remote Similarity NPD7199 Phase 2
0.6903 Remote Similarity NPD1501 Clinical (unspecified phase)
0.6903 Remote Similarity NPD6032 Approved
0.6892 Remote Similarity NPD2797 Approved
0.6875 Remote Similarity NPD2534 Approved
0.6875 Remote Similarity NPD2532 Approved
0.6875 Remote Similarity NPD2533 Approved
0.6867 Remote Similarity NPD7768 Phase 2
0.6865 Remote Similarity NPD7435 Discontinued
0.6863 Remote Similarity NPD1899 Clinical (unspecified phase)
0.6863 Remote Similarity NPD1933 Approved
0.6861 Remote Similarity NPD9265 Clinical (unspecified phase)
0.6859 Remote Similarity NPD2029 Clinical (unspecified phase)
0.6859 Remote Similarity NPD5762 Approved
0.6859 Remote Similarity NPD2346 Discontinued
0.6859 Remote Similarity NPD5763 Approved
0.6849 Remote Similarity NPD1201 Approved
0.6848 Remote Similarity NPD8455 Phase 2
0.6846 Remote Similarity NPD5647 Approved
0.6842 Remote Similarity NPD259 Phase 1
0.6839 Remote Similarity NPD1509 Clinical (unspecified phase)
0.6835 Remote Similarity NPD6398 Clinical (unspecified phase)
0.6832 Remote Similarity NPD5049 Phase 3
0.6828 Remote Similarity NPD8319 Approved
0.6828 Remote Similarity NPD8320 Phase 1
0.6824 Remote Similarity NPD5242 Approved
0.6824 Remote Similarity NPD1283 Approved
0.6818 Remote Similarity NPD1607 Approved
0.6818 Remote Similarity NPD6653 Approved
0.6809 Remote Similarity NPD5283 Phase 1
0.6805 Remote Similarity NPD1247 Approved
0.68 Remote Similarity NPD9569 Approved
0.6797 Remote Similarity NPD2979 Phase 3
0.6796 Remote Similarity NPD6535 Approved
0.6796 Remote Similarity NPD6534 Approved
0.6795 Remote Similarity NPD2796 Approved
0.6783 Remote Similarity NPD405 Clinical (unspecified phase)
0.6781 Remote Similarity NPD3847 Discontinued
0.6776 Remote Similarity NPD3268 Approved
0.677 Remote Similarity NPD3146 Approved
0.677 Remote Similarity NPD7004 Clinical (unspecified phase)
0.677 Remote Similarity NPD3688 Clinical (unspecified phase)
0.677 Remote Similarity NPD7410 Clinical (unspecified phase)
0.6752 Remote Similarity NPD2344 Approved
0.6752 Remote Similarity NPD2353 Approved
0.6752 Remote Similarity NPD2355 Clinical (unspecified phase)
0.675 Remote Similarity NPD3300 Phase 2
0.6747 Remote Similarity NPD7972 Discontinued
0.6743 Remote Similarity NPD7039 Approved
0.6743 Remote Similarity NPD7038 Approved
0.6743 Remote Similarity NPD7240 Approved
0.6739 Remote Similarity NPD1358 Approved

Structure

External Identifiers

PubChem CID   6450178
ChEMBL   CHEMBL1095595
ZINC  

Physicochemical Properties

Molecular Weight:  418.09
ALogP:  -2.1716
MLogP:  2.56
XLogP:  1.291
# Rotatable Bonds:  15
Polar Surface Area:  181.82
# H-Bond Aceptor:  7
# H-Bond Donor:  6
# Rings:  2
# Heavy Atoms:  30

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
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Biological Activities  
Similar NPs/Drugs