Natural Product: NPC476463

Natural Product ID:  NPC476463
Common Name:   Thunberginol D
IUPAC Name:   3-(3,4-dihydroxyphenyl)-6,8-dihydroxy-3,4-dihydroisochromen-1-one
Synonyms:   thunberginol D
Molecular Formula:   C15H12O6
Standard InCHIKey:  NNFSGOSBNORREV-UHFFFAOYSA-N
Standard InCHI:  InChI=1S/C15H12O6/c16-9-3-8-5-13(7-1-2-10(17)11(18)4-7)21-15(20)14(8)12(19)6-9/h1-4,6,13,16-19H,5H2
Canonical SMILES:  Oc1cc2CC(OC(=O)c2c(c1)O)c1ccc(c(c1)O)O
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO33513 hydrangeae dulcis folium Species NA NA PMID[9871657]
NPO9360.1 Hydrangea macrophylla var. thunbergii Varieties Hydrangeaceae Eukaryota Leaves PMID[17609121]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT520 Cell Line 3T3-L1 Mus musculus Activity = 4 % 16309317
NPT520 Cell Line 3T3-L1 Mus musculus Activity = 12.5 % 17629328
NPT520 Cell Line 3T3-L1 Mus musculus Activity = 2.8 % 23642481
NPT520 Cell Line 3T3-L1 Mus musculus Activity = -0.8 % 19700322
NPT520 Cell Line 3T3-L1 Mus musculus Activity = -1.2 % 15165138

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC476463 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9507 High Similarity NPC257025
0.95 High Similarity NPC155205
0.9459 High Similarity NPC227062
0.9286 High Similarity NPC261292
0.9286 High Similarity NPC301915
0.9257 High Similarity NPC295646
0.9195 High Similarity NPC125487
0.9195 High Similarity NPC281703
0.9189 High Similarity NPC204350
0.9155 High Similarity NPC471819
0.9155 High Similarity NPC134969
0.9133 High Similarity NPC67396
0.9116 High Similarity NPC294852
0.9116 High Similarity NPC321011
0.9116 High Similarity NPC188679
0.911 High Similarity NPC138978
0.911 High Similarity NPC268366
0.9085 High Similarity NPC472602
0.9078 High Similarity NPC235115
0.9073 High Similarity NPC24640
0.9067 High Similarity NPC281477
0.9054 High Similarity NPC183959
0.9054 High Similarity NPC1612
0.9028 High Similarity NPC53649
0.9007 High Similarity NPC199926
0.9007 High Similarity NPC16082
0.9007 High Similarity NPC82592
0.9007 High Similarity NPC20541
0.9 High Similarity NPC167903
0.8958 High Similarity NPC158472
0.8954 High Similarity NPC210459
0.8947 High Similarity NPC150227
0.8944 High Similarity NPC223836
0.8933 High Similarity NPC227485
0.8933 High Similarity NPC204515
0.8926 High Similarity NPC237440
0.8926 High Similarity NPC270160
0.8919 High Similarity NPC81835
0.8912 High Similarity NPC83272
0.8896 High Similarity NPC36217
0.8896 High Similarity NPC471744
0.8896 High Similarity NPC321399
0.8889 High Similarity NPC84935
0.8889 High Similarity NPC247409
0.8889 High Similarity NPC77679
0.8889 High Similarity NPC88269
0.8889 High Similarity NPC190020
0.8881 High Similarity NPC70380
0.8874 High Similarity NPC302950
0.8874 High Similarity NPC246162
0.8874 High Similarity NPC36835
0.8874 High Similarity NPC236637
0.8874 High Similarity NPC61506
0.8874 High Similarity NPC9743
0.8874 High Similarity NPC260491
0.8874 High Similarity NPC240476
0.8874 High Similarity NPC219582
0.8867 High Similarity NPC96501
0.8867 High Similarity NPC85131
0.8865 High Similarity NPC153783
0.8859 High Similarity NPC3036
0.8851 High Similarity NPC473023
0.8844 High Similarity NPC242893
0.8844 High Similarity NPC38065
0.8844 High Similarity NPC151607
0.8844 High Similarity NPC42540
0.8839 High Similarity NPC112418
0.8831 High Similarity NPC85121
0.8831 High Similarity NPC329091
0.8828 High Similarity NPC472601
0.8828 High Similarity NPC472600
0.8819 High Similarity NPC191835
0.8819 High Similarity NPC212693
0.8819 High Similarity NPC126739
0.8819 High Similarity NPC478200
0.8819 High Similarity NPC33144
0.8819 High Similarity NPC94248
0.8819 High Similarity NPC197666
0.8816 High Similarity NPC325028
0.8816 High Similarity NPC256346
0.8816 High Similarity NPC192083
0.8816 High Similarity NPC27532
0.8816 High Similarity NPC18727
0.8816 High Similarity NPC213896
0.8816 High Similarity NPC246328
0.8811 High Similarity NPC291454
0.8808 High Similarity NPC215921
0.8808 High Similarity NPC70016
0.8808 High Similarity NPC202157
0.88 High Similarity NPC105512
0.8792 High Similarity NPC95864
0.8782 High Similarity NPC471745
0.8782 High Similarity NPC472964
0.8782 High Similarity NPC201800
0.8776 High Similarity NPC121573
0.8776 High Similarity NPC226738
0.8776 High Similarity NPC190587
0.8776 High Similarity NPC469542
0.8776 High Similarity NPC478202
0.8776 High Similarity NPC159721
0.8776 High Similarity NPC470130
0.8776 High Similarity NPC22176
0.8774 High Similarity NPC472902
0.8774 High Similarity NPC24627
0.8767 High Similarity NPC472603
0.8767 High Similarity NPC472604
0.8767 High Similarity NPC130485
0.8767 High Similarity NPC472605
0.8767 High Similarity NPC313123
0.8767 High Similarity NPC478217
0.8767 High Similarity NPC158634
0.8766 High Similarity NPC474010
0.8766 High Similarity NPC108456
0.8766 High Similarity NPC135222
0.8759 High Similarity NPC105456
0.8759 High Similarity NPC32360
0.8759 High Similarity NPC139634
0.8759 High Similarity NPC268052
0.8758 High Similarity NPC79998
0.8758 High Similarity NPC38898
0.8758 High Similarity NPC321779
0.875 High Similarity NPC19721
0.875 High Similarity NPC106976
0.875 High Similarity NPC260979
0.875 High Similarity NPC62907
0.875 High Similarity NPC71256
0.8742 High Similarity NPC151473
0.8742 High Similarity NPC470107
0.8742 High Similarity NPC62042
0.8741 High Similarity NPC27407
0.8741 High Similarity NPC142027
0.8734 High Similarity NPC472452
0.8733 High Similarity NPC218490
0.8733 High Similarity NPC119059
0.8733 High Similarity NPC221352
0.8733 High Similarity NPC276930
0.8726 High Similarity NPC186686
0.8725 High Similarity NPC51513
0.8725 High Similarity NPC267509
0.8725 High Similarity NPC202112
0.8723 High Similarity NPC219892
0.8723 High Similarity NPC189823
0.8723 High Similarity NPC470831
0.8723 High Similarity NPC214702
0.8716 High Similarity NPC210425
0.8716 High Similarity NPC279121
0.8716 High Similarity NPC280404
0.8716 High Similarity NPC277426
0.8716 High Similarity NPC86373
0.8707 High Similarity NPC250755
0.8707 High Similarity NPC322112
0.8707 High Similarity NPC82913
0.8707 High Similarity NPC471733
0.8701 High Similarity NPC471500
0.8701 High Similarity NPC278778
0.8701 High Similarity NPC153512
0.8701 High Similarity NPC291878
0.8701 High Similarity NPC195796
0.8701 High Similarity NPC35038
0.8701 High Similarity NPC326037
0.8701 High Similarity NPC201837
0.8701 High Similarity NPC54928
0.8701 High Similarity NPC13858
0.8701 High Similarity NPC320825
0.8701 High Similarity NPC235165
0.8701 High Similarity NPC255106
0.8699 High Similarity NPC187690
0.8693 High Similarity NPC238672
0.8693 High Similarity NPC298692
0.8693 High Similarity NPC74924
0.8693 High Similarity NPC291510
0.8693 High Similarity NPC144801
0.8693 High Similarity NPC89474
0.8693 High Similarity NPC469550
0.8693 High Similarity NPC43872
0.8693 High Similarity NPC197188
0.8693 High Similarity NPC116850
0.8693 High Similarity NPC141212
0.869 High Similarity NPC221104
0.869 High Similarity NPC175552
0.8671 High Similarity NPC175943
0.8671 High Similarity NPC293319
0.8671 High Similarity NPC248150
0.8671 High Similarity NPC471788
0.8667 High Similarity NPC108406
0.8667 High Similarity NPC166583
0.8667 High Similarity NPC125449
0.8667 High Similarity NPC53362
0.8667 High Similarity NPC188074
0.8662 High Similarity NPC14030
0.8662 High Similarity NPC211107
0.8662 High Similarity NPC291957
0.8658 High Similarity NPC70136
0.8658 High Similarity NPC32470
0.8654 High Similarity NPC292415
0.8654 High Similarity NPC470183
0.8654 High Similarity NPC299436
0.8654 High Similarity NPC200594
0.8654 High Similarity NPC474960
0.8652 High Similarity NPC233056

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC476463 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8874 High Similarity NPD1934 Approved
0.8816 High Similarity NPD2393 Clinical (unspecified phase)
0.8716 High Similarity NPD1511 Approved
0.8601 High Similarity NPD230 Phase 1
0.86 High Similarity NPD1512 Approved
0.8581 High Similarity NPD4868 Clinical (unspecified phase)
0.8531 High Similarity NPD943 Approved
0.8503 High Similarity NPD970 Clinical (unspecified phase)
0.8452 Intermediate Similarity NPD1465 Phase 2
0.8435 Intermediate Similarity NPD1552 Clinical (unspecified phase)
0.8435 Intermediate Similarity NPD1550 Clinical (unspecified phase)
0.8428 Intermediate Similarity NPD6232 Discontinued
0.8378 Intermediate Similarity NPD1549 Phase 2
0.8333 Intermediate Similarity NPD2801 Approved
0.8333 Intermediate Similarity NPD7819 Suspended
0.8323 Intermediate Similarity NPD6167 Clinical (unspecified phase)
0.8323 Intermediate Similarity NPD6166 Phase 2
0.8323 Intermediate Similarity NPD6168 Clinical (unspecified phase)
0.8299 Intermediate Similarity NPD651 Clinical (unspecified phase)
0.8299 Intermediate Similarity NPD1510 Phase 2
0.828 Intermediate Similarity NPD3817 Phase 2
0.8272 Intermediate Similarity NPD7473 Discontinued
0.8258 Intermediate Similarity NPD4380 Phase 2
0.8232 Intermediate Similarity NPD7074 Phase 3
0.8221 Intermediate Similarity NPD3818 Discontinued
0.8193 Intermediate Similarity NPD4338 Clinical (unspecified phase)
0.8176 Intermediate Similarity NPD7075 Discontinued
0.8171 Intermediate Similarity NPD7054 Approved
0.8171 Intermediate Similarity NPD5844 Phase 1
0.8121 Intermediate Similarity NPD7472 Approved
0.8113 Intermediate Similarity NPD3882 Suspended
0.8101 Intermediate Similarity NPD7096 Clinical (unspecified phase)
0.8072 Intermediate Similarity NPD6797 Phase 2
0.8063 Intermediate Similarity NPD4381 Clinical (unspecified phase)
0.8052 Intermediate Similarity NPD2532 Approved
0.8052 Intermediate Similarity NPD2534 Approved
0.8052 Intermediate Similarity NPD2533 Approved
0.8027 Intermediate Similarity NPD1240 Approved
0.8026 Intermediate Similarity NPD3750 Approved
0.8024 Intermediate Similarity NPD7251 Discontinued
0.7974 Intermediate Similarity NPD6190 Approved
0.7964 Intermediate Similarity NPD7993 Clinical (unspecified phase)
0.7958 Intermediate Similarity NPD9269 Phase 2
0.795 Intermediate Similarity NPD3749 Approved
0.7935 Intermediate Similarity NPD4378 Clinical (unspecified phase)
0.7933 Intermediate Similarity NPD1509 Clinical (unspecified phase)
0.7919 Intermediate Similarity NPD1607 Approved
0.7914 Intermediate Similarity NPD6959 Discontinued
0.7905 Intermediate Similarity NPD1612 Clinical (unspecified phase)
0.7905 Intermediate Similarity NPD1613 Approved
0.7881 Intermediate Similarity NPD1551 Phase 2
0.7871 Intermediate Similarity NPD6799 Approved
0.787 Intermediate Similarity NPD7808 Phase 3
0.7862 Intermediate Similarity NPD7411 Suspended
0.7853 Intermediate Similarity NPD5494 Approved
0.7826 Intermediate Similarity NPD8443 Clinical (unspecified phase)
0.7812 Intermediate Similarity NPD6801 Discontinued
0.7799 Intermediate Similarity NPD6599 Discontinued
0.7791 Intermediate Similarity NPD6234 Discontinued
0.777 Intermediate Similarity NPD3764 Approved
0.7763 Intermediate Similarity NPD2796 Approved
0.7763 Intermediate Similarity NPD2935 Discontinued
0.7755 Intermediate Similarity NPD1529 Clinical (unspecified phase)
0.7716 Intermediate Similarity NPD5402 Approved
0.7697 Intermediate Similarity NPD3748 Approved
0.7687 Intermediate Similarity NPD1530 Clinical (unspecified phase)
0.7676 Intermediate Similarity NPD9268 Approved
0.7669 Intermediate Similarity NPD7768 Phase 2
0.7665 Intermediate Similarity NPD7852 Clinical (unspecified phase)
0.7647 Intermediate Similarity NPD5405 Approved
0.7647 Intermediate Similarity NPD5404 Approved
0.7647 Intermediate Similarity NPD5406 Approved
0.7647 Intermediate Similarity NPD5408 Approved
0.7643 Intermediate Similarity NPD7390 Discontinued
0.7639 Intermediate Similarity NPD1201 Approved
0.7633 Intermediate Similarity NPD7804 Clinical (unspecified phase)
0.761 Intermediate Similarity NPD5403 Approved
0.7606 Intermediate Similarity NPD9545 Approved
0.7602 Intermediate Similarity NPD6559 Discontinued
0.76 Intermediate Similarity NPD8397 Clinical (unspecified phase)
0.7595 Intermediate Similarity NPD5401 Approved
0.7595 Intermediate Similarity NPD7422 Clinical (unspecified phase)
0.7593 Intermediate Similarity NPD37 Approved
0.759 Intermediate Similarity NPD7199 Phase 2
0.7586 Intermediate Similarity NPD8150 Discontinued
0.7576 Intermediate Similarity NPD919 Approved
0.7574 Intermediate Similarity NPD7228 Approved
0.7564 Intermediate Similarity NPD4628 Phase 3
0.7561 Intermediate Similarity NPD4966 Approved
0.7561 Intermediate Similarity NPD4965 Approved
0.7561 Intermediate Similarity NPD4967 Phase 2
0.7551 Intermediate Similarity NPD1470 Approved
0.7545 Intermediate Similarity NPD5710 Approved
0.7545 Intermediate Similarity NPD5711 Approved
0.7533 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.7516 Intermediate Similarity NPD3226 Approved
0.7514 Intermediate Similarity NPD7879 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD7184 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD6980 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD447 Suspended
0.7484 Intermediate Similarity NPD7266 Discontinued
0.7484 Intermediate Similarity NPD7410 Clinical (unspecified phase)
0.7484 Intermediate Similarity NPD2346 Discontinued
0.7471 Intermediate Similarity NPD3751 Discontinued
0.7467 Intermediate Similarity NPD3027 Phase 3
0.7465 Intermediate Similarity NPD9493 Approved
0.7453 Intermediate Similarity NPD1653 Approved
0.7452 Intermediate Similarity NPD1878 Clinical (unspecified phase)
0.7432 Intermediate Similarity NPD1164 Approved
0.7432 Intermediate Similarity NPD1203 Approved
0.7429 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.7421 Intermediate Similarity NPD6143 Clinical (unspecified phase)
0.7391 Intermediate Similarity NPD920 Approved
0.7389 Intermediate Similarity NPD7421 Clinical (unspecified phase)
0.7375 Intermediate Similarity NPD642 Clinical (unspecified phase)
0.7375 Intermediate Similarity NPD7004 Clinical (unspecified phase)
0.7358 Intermediate Similarity NPD643 Clinical (unspecified phase)
0.7342 Intermediate Similarity NPD8166 Discontinued
0.7337 Intermediate Similarity NPD3787 Discontinued
0.7314 Intermediate Similarity NPD8312 Approved
0.7314 Intermediate Similarity NPD8313 Approved
0.7301 Intermediate Similarity NPD5808 Clinical (unspecified phase)
0.7299 Intermediate Similarity NPD7685 Pre-registration
0.7279 Intermediate Similarity NPD1610 Phase 2
0.7278 Intermediate Similarity NPD1243 Approved
0.7278 Intermediate Similarity NPD2800 Approved
0.7278 Intermediate Similarity NPD1247 Approved
0.7273 Intermediate Similarity NPD1933 Approved
0.7261 Intermediate Similarity NPD2029 Clinical (unspecified phase)
0.7233 Intermediate Similarity NPD6398 Clinical (unspecified phase)
0.723 Intermediate Similarity NPD1608 Approved
0.7219 Intermediate Similarity NPD9494 Approved
0.7197 Intermediate Similarity NPD6100 Approved
0.7197 Intermediate Similarity NPD6099 Approved
0.7196 Intermediate Similarity NPD8151 Discontinued
0.7195 Intermediate Similarity NPD3455 Phase 2
0.7193 Intermediate Similarity NPD5242 Approved
0.7193 Intermediate Similarity NPD3926 Phase 2
0.719 Intermediate Similarity NPD2313 Discontinued
0.7186 Intermediate Similarity NPD4288 Approved
0.7162 Intermediate Similarity NPD1547 Clinical (unspecified phase)
0.7161 Intermediate Similarity NPD1899 Clinical (unspecified phase)
0.7143 Intermediate Similarity NPD6534 Approved
0.7143 Intermediate Similarity NPD5953 Discontinued
0.7143 Intermediate Similarity NPD6535 Approved
0.7135 Intermediate Similarity NPD7229 Phase 3
0.7135 Intermediate Similarity NPD7501 Clinical (unspecified phase)
0.7134 Intermediate Similarity NPD2799 Discontinued
0.7134 Intermediate Similarity NPD7033 Discontinued
0.7126 Intermediate Similarity NPD7286 Phase 2
0.7114 Intermediate Similarity NPD9717 Approved
0.7112 Intermediate Similarity NPD7435 Discontinued
0.7103 Intermediate Similarity NPD405 Clinical (unspecified phase)
0.7102 Intermediate Similarity NPD7240 Approved
0.7083 Intermediate Similarity NPD5353 Approved
0.7074 Intermediate Similarity NPD8320 Phase 1
0.7074 Intermediate Similarity NPD8319 Approved
0.7059 Intermediate Similarity NPD6832 Phase 2
0.7059 Intermediate Similarity NPD4908 Phase 1
0.7047 Intermediate Similarity NPD422 Phase 1
0.7044 Intermediate Similarity NPD2344 Approved
0.7043 Intermediate Similarity NPD6776 Approved
0.7043 Intermediate Similarity NPD6780 Approved
0.7043 Intermediate Similarity NPD6778 Approved
0.7043 Intermediate Similarity NPD6781 Approved
0.7043 Intermediate Similarity NPD6777 Approved
0.7043 Intermediate Similarity NPD6782 Approved
0.7043 Intermediate Similarity NPD6779 Approved
0.7037 Intermediate Similarity NPD3300 Phase 2
0.7027 Intermediate Similarity NPD7699 Phase 2
0.7027 Intermediate Similarity NPD7700 Phase 2
0.7027 Intermediate Similarity NPD17 Approved
0.7021 Intermediate Similarity NPD9266 Approved
0.7021 Intermediate Similarity NPD74 Approved
0.702 Intermediate Similarity NPD1283 Approved
0.7017 Intermediate Similarity NPD4287 Approved
0.7007 Intermediate Similarity NPD1548 Phase 1
0.7006 Intermediate Similarity NPD6651 Approved
0.7006 Intermediate Similarity NPD7615 Clinical (unspecified phase)
0.7 Intermediate Similarity NPD8434 Phase 2
0.6987 Remote Similarity NPD4060 Phase 1
0.6981 Remote Similarity NPD9570 Approved
0.6974 Remote Similarity NPD2797 Approved
0.6968 Remote Similarity NPD4907 Clinical (unspecified phase)
0.6968 Remote Similarity NPD3268 Approved
0.6968 Remote Similarity NPD5005 Approved
0.6968 Remote Similarity NPD5006 Approved
0.6968 Remote Similarity NPD6798 Discontinued
0.6968 Remote Similarity NPD411 Approved
0.6966 Remote Similarity NPD4419 Clinical (unspecified phase)
0.6957 Remote Similarity NPD1652 Phase 2
0.695 Remote Similarity NPD9265 Clinical (unspecified phase)
0.695 Remote Similarity NPD9263 Approved
0.695 Remote Similarity NPD9267 Approved
0.695 Remote Similarity NPD9264 Approved
0.6943 Remote Similarity NPD7782 Clinical (unspecified phase)
0.6943 Remote Similarity NPD6355 Discontinued
0.6943 Remote Similarity NPD7783 Phase 2
0.6928 Remote Similarity NPD2798 Approved
0.6923 Remote Similarity NPD8455 Phase 2

Structure

External Identifiers

PubChem CID   188928
ChEMBL   CHEMBL71702
ZINC  

Physicochemical Properties

Molecular Weight:  288.06
ALogP:  -1.9203
MLogP:  2.45
XLogP:  1.634
# Rotatable Bonds:  5
Polar Surface Area:  107.22
# H-Bond Aceptor:  2
# H-Bond Donor:  4
# Rings:  3
# Heavy Atoms:  21

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs