Natural Product: NPC476280

Natural Product ID:  NPC476280
Common Name:   Ugonin R
IUPAC Name:   2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-6-[[(1S)-2-hydroxy-2,6,6-trimethylcyclohexyl]methyl]chromen-4-one
Synonyms:   Ugonin R
Molecular Formula:   C25H28O7
Standard InCHIKey:  IEDRNKKFHHTLRT-BWDMCYIDSA-N
Standard InCHI:  InChI=1S/C25H28O7/c1-24(2)7-4-8-25(3,31)21(24)10-14-16(27)11-20-22(23(14)30)18(29)12-19(32-20)13-5-6-15(26)17(28)9-13/h5-6,9,11-12,21,26-28,30-31H,4,7-8,10H2,1-3H3/t21-,25?/m0/s1
Canonical SMILES:  Oc1cc2oc(cc(=O)c2c(c1C[C@H]1C(C)(C)CCCC1(C)O)O)c1ccc(c(c1)O)O
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO11959 Helminthostachys zeylanica Species Ophioglossaceae Eukaryota Rhizomes PMID[19583252]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT65 Cell Line HepG2 Homo sapiens IC50 > 10000 nM 26213786
NPT83 Cell Line MCF7 Homo sapiens IC50 > 10000 nM 10924160
NPT2 Others Unspecified IC50 = 4560 nM 21572583
NPT2 Others Unspecified IC50 > 10000 nM 18519731

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC476280 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9934 High Similarity NPC46736
0.9869 High Similarity NPC206605
0.9868 High Similarity NPC297212
0.9805 High Similarity NPC12461
0.9803 High Similarity NPC197856
0.9677 High Similarity NPC476295
0.9542 High Similarity NPC3980
0.9539 High Similarity NPC170492
0.9494 High Similarity NPC476306
0.9487 High Similarity NPC78332
0.947 High Similarity NPC3825
0.947 High Similarity NPC88804
0.9423 High Similarity NPC234644
0.9423 High Similarity NPC472906
0.9416 High Similarity NPC276444
0.9416 High Similarity NPC471985
0.9408 High Similarity NPC154345
0.9367 High Similarity NPC156432
0.9363 High Similarity NPC474150
0.9363 High Similarity NPC329760
0.9363 High Similarity NPC474162
0.9359 High Similarity NPC45146
0.9359 High Similarity NPC80375
0.9359 High Similarity NPC476283
0.9359 High Similarity NPC235018
0.9359 High Similarity NPC188433
0.9359 High Similarity NPC28241
0.9359 High Similarity NPC471973
0.9355 High Similarity NPC237418
0.9355 High Similarity NPC273843
0.9355 High Similarity NPC476630
0.9355 High Similarity NPC218871
0.9346 High Similarity NPC157784
0.9346 High Similarity NPC37684
0.9346 High Similarity NPC63187
0.9304 High Similarity NPC207690
0.9304 High Similarity NPC189473
0.9304 High Similarity NPC306321
0.9304 High Similarity NPC23298
0.9304 High Similarity NPC186686
0.9304 High Similarity NPC303460
0.9299 High Similarity NPC32694
0.9299 High Similarity NPC472275
0.9299 High Similarity NPC278427
0.9299 High Similarity NPC57715
0.9295 High Similarity NPC172770
0.9295 High Similarity NPC235448
0.9295 High Similarity NPC185258
0.929 High Similarity NPC13779
0.929 High Similarity NPC170026
0.929 High Similarity NPC475799
0.929 High Similarity NPC282307
0.9281 High Similarity NPC59162
0.9281 High Similarity NPC205046
0.9281 High Similarity NPC305965
0.9281 High Similarity NPC304295
0.9245 High Similarity NPC239752
0.9245 High Similarity NPC275780
0.9245 High Similarity NPC472450
0.9236 High Similarity NPC204290
0.9236 High Similarity NPC119209
0.9236 High Similarity NPC192686
0.9236 High Similarity NPC118256
0.9231 High Similarity NPC161960
0.9231 High Similarity NPC304008
0.9231 High Similarity NPC471209
0.9231 High Similarity NPC187745
0.9231 High Similarity NPC136674
0.9231 High Similarity NPC218313
0.9231 High Similarity NPC79053
0.9231 High Similarity NPC474681
0.9226 High Similarity NPC472280
0.9226 High Similarity NPC133392
0.9226 High Similarity NPC234255
0.9221 High Similarity NPC471982
0.9221 High Similarity NPC237994
0.9221 High Similarity NPC249570
0.9193 High Similarity NPC476637
0.9193 High Similarity NPC165456
0.9193 High Similarity NPC288813
0.9187 High Similarity NPC43319
0.9187 High Similarity NPC37870
0.9187 High Similarity NPC472449
0.9187 High Similarity NPC39091
0.9182 High Similarity NPC220313
0.9177 High Similarity NPC167678
0.9177 High Similarity NPC259456
0.9177 High Similarity NPC187354
0.9177 High Similarity NPC29876
0.9177 High Similarity NPC474038
0.9177 High Similarity NPC198829
0.9172 High Similarity NPC204879
0.9172 High Similarity NPC210459
0.9172 High Similarity NPC280680
0.9172 High Similarity NPC74178
0.9172 High Similarity NPC184755
0.9167 High Similarity NPC472455
0.9167 High Similarity NPC5322
0.9167 High Similarity NPC6633
0.9167 High Similarity NPC133970
0.9167 High Similarity NPC142339
0.9167 High Similarity NPC115853
0.9167 High Similarity NPC24640
0.9161 High Similarity NPC74924
0.9161 High Similarity NPC476631
0.9161 High Similarity NPC192083
0.9161 High Similarity NPC213896
0.9145 High Similarity NPC108406
0.9136 High Similarity NPC101107
0.913 High Similarity NPC218226
0.913 High Similarity NPC126204
0.9125 High Similarity NPC303174
0.9125 High Similarity NPC293319
0.9119 High Similarity NPC194427
0.9119 High Similarity NPC83922
0.9119 High Similarity NPC470694
0.9119 High Similarity NPC472448
0.9119 High Similarity NPC229632
0.9119 High Similarity NPC25152
0.9114 High Similarity NPC328102
0.9114 High Similarity NPC475784
0.9114 High Similarity NPC474960
0.9114 High Similarity NPC139036
0.9114 High Similarity NPC321399
0.9114 High Similarity NPC476980
0.9114 High Similarity NPC36217
0.9108 High Similarity NPC180011
0.9108 High Similarity NPC284820
0.9108 High Similarity NPC236796
0.9108 High Similarity NPC473272
0.9108 High Similarity NPC27337
0.9108 High Similarity NPC52889
0.9108 High Similarity NPC219867
0.9103 High Similarity NPC80534
0.9103 High Similarity NPC56786
0.9103 High Similarity NPC200246
0.9103 High Similarity NPC321779
0.9103 High Similarity NPC67396
0.9097 High Similarity NPC106976
0.9074 High Similarity NPC475805
0.9074 High Similarity NPC300307
0.9074 High Similarity NPC188079
0.9073 High Similarity NPC279121
0.9073 High Similarity NPC11700
0.9068 High Similarity NPC320741
0.9068 High Similarity NPC171985
0.9062 High Similarity NPC472625
0.9062 High Similarity NPC152659
0.9062 High Similarity NPC236521
0.9062 High Similarity NPC319200
0.9062 High Similarity NPC187491
0.9062 High Similarity NPC248638
0.9057 High Similarity NPC471210
0.9057 High Similarity NPC26326
0.9057 High Similarity NPC472632
0.9057 High Similarity NPC61010
0.9057 High Similarity NPC142252
0.9051 High Similarity NPC53545
0.9051 High Similarity NPC100123
0.9051 High Similarity NPC469658
0.9051 High Similarity NPC85121
0.9051 High Similarity NPC117418
0.9051 High Similarity NPC474290
0.9045 High Similarity NPC68093
0.9045 High Similarity NPC470600
0.9045 High Similarity NPC35038
0.9045 High Similarity NPC192587
0.9045 High Similarity NPC472907
0.9045 High Similarity NPC278778
0.9045 High Similarity NPC291878
0.9045 High Similarity NPC191146
0.9045 High Similarity NPC195796
0.9038 High Similarity NPC70433
0.9038 High Similarity NPC33051
0.9038 High Similarity NPC298692
0.9038 High Similarity NPC280530
0.9038 High Similarity NPC472905
0.9038 High Similarity NPC178964
0.9038 High Similarity NPC227337
0.9038 High Similarity NPC89474
0.9038 High Similarity NPC95842
0.9038 High Similarity NPC273462
0.9038 High Similarity NPC49402
0.9038 High Similarity NPC329844
0.9026 High Similarity NPC10027
0.9026 High Similarity NPC52005
0.9026 High Similarity NPC177298
0.9026 High Similarity NPC65775
0.9026 High Similarity NPC223579
0.9026 High Similarity NPC270465
0.9026 High Similarity NPC87125
0.9026 High Similarity NPC137062
0.9026 High Similarity NPC48479
0.9026 High Similarity NPC287101
0.9026 High Similarity NPC38545
0.9026 High Similarity NPC183950
0.9026 High Similarity NPC171916
0.9018 High Similarity NPC472276
0.9013 High Similarity NPC70136
0.9013 High Similarity NPC470673

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC476280 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.9161 High Similarity NPD2393 Clinical (unspecified phase)
0.9073 High Similarity NPD1511 Approved
0.8954 High Similarity NPD1512 Approved
0.8917 High Similarity NPD2801 Approved
0.8854 High Similarity NPD1934 Approved
0.8766 High Similarity NPD4378 Clinical (unspecified phase)
0.8766 High Similarity NPD7410 Clinical (unspecified phase)
0.8659 High Similarity NPD6166 Phase 2
0.8659 High Similarity NPD6168 Clinical (unspecified phase)
0.8659 High Similarity NPD6167 Clinical (unspecified phase)
0.8509 High Similarity NPD8443 Clinical (unspecified phase)
0.8494 Intermediate Similarity NPD7473 Discontinued
0.8491 Intermediate Similarity NPD4380 Phase 2
0.8457 Intermediate Similarity NPD3882 Suspended
0.8424 Intermediate Similarity NPD6232 Discontinued
0.8415 Intermediate Similarity NPD5494 Approved
0.8395 Intermediate Similarity NPD3817 Phase 2
0.8393 Intermediate Similarity NPD7054 Approved
0.8364 Intermediate Similarity NPD6959 Discontinued
0.8344 Intermediate Similarity NPD4868 Clinical (unspecified phase)
0.8343 Intermediate Similarity NPD7472 Approved
0.8343 Intermediate Similarity NPD7074 Phase 3
0.8333 Intermediate Similarity NPD7819 Suspended
0.8333 Intermediate Similarity NPD3818 Discontinued
0.8294 Intermediate Similarity NPD6797 Phase 2
0.8246 Intermediate Similarity NPD7251 Discontinued
0.821 Intermediate Similarity NPD7411 Suspended
0.8205 Intermediate Similarity NPD2800 Approved
0.8194 Intermediate Similarity NPD1552 Clinical (unspecified phase)
0.8194 Intermediate Similarity NPD1550 Clinical (unspecified phase)
0.8182 Intermediate Similarity NPD1510 Phase 2
0.8182 Intermediate Similarity NPD7075 Discontinued
0.8182 Intermediate Similarity NPD4381 Clinical (unspecified phase)
0.8176 Intermediate Similarity NPD5844 Phase 1
0.8153 Intermediate Similarity NPD3750 Approved
0.8141 Intermediate Similarity NPD1549 Phase 2
0.8141 Intermediate Similarity NPD970 Clinical (unspecified phase)
0.8129 Intermediate Similarity NPD6099 Approved
0.8129 Intermediate Similarity NPD6100 Approved
0.8129 Intermediate Similarity NPD2796 Approved
0.811 Intermediate Similarity NPD7096 Clinical (unspecified phase)
0.811 Intermediate Similarity NPD1465 Phase 2
0.8092 Intermediate Similarity NPD7808 Phase 3
0.8092 Intermediate Similarity NPD4338 Clinical (unspecified phase)
0.8072 Intermediate Similarity NPD3749 Approved
0.807 Intermediate Similarity NPD7804 Clinical (unspecified phase)
0.8049 Intermediate Similarity NPD6801 Discontinued
0.8039 Intermediate Similarity NPD1240 Approved
0.8039 Intermediate Similarity NPD943 Approved
0.8037 Intermediate Similarity NPD6599 Discontinued
0.8012 Intermediate Similarity NPD7768 Phase 2
0.8 Intermediate Similarity NPD7852 Clinical (unspecified phase)
0.7935 Intermediate Similarity NPD1607 Approved
0.7888 Intermediate Similarity NPD7390 Discontinued
0.7888 Intermediate Similarity NPD6799 Approved
0.7874 Intermediate Similarity NPD7993 Clinical (unspecified phase)
0.7866 Intermediate Similarity NPD3226 Approved
0.784 Intermediate Similarity NPD2533 Approved
0.784 Intermediate Similarity NPD2532 Approved
0.784 Intermediate Similarity NPD2534 Approved
0.7834 Intermediate Similarity NPD3748 Approved
0.7834 Intermediate Similarity NPD1509 Clinical (unspecified phase)
0.7821 Intermediate Similarity NPD6651 Approved
0.7812 Intermediate Similarity NPD6398 Clinical (unspecified phase)
0.7785 Intermediate Similarity NPD2935 Discontinued
0.7778 Intermediate Similarity NPD1529 Clinical (unspecified phase)
0.775 Intermediate Similarity NPD7421 Clinical (unspecified phase)
0.7738 Intermediate Similarity NPD5402 Approved
0.7727 Intermediate Similarity NPD6559 Discontinued
0.7722 Intermediate Similarity NPD2799 Discontinued
0.7722 Intermediate Similarity NPD651 Clinical (unspecified phase)
0.7719 Intermediate Similarity NPD1247 Approved
0.7712 Intermediate Similarity NPD1530 Clinical (unspecified phase)
0.7706 Intermediate Similarity NPD919 Approved
0.7684 Intermediate Similarity NPD4419 Clinical (unspecified phase)
0.7677 Intermediate Similarity NPD4907 Clinical (unspecified phase)
0.764 Intermediate Similarity NPD1243 Approved
0.7636 Intermediate Similarity NPD5403 Approved
0.763 Intermediate Similarity NPD3926 Phase 2
0.7625 Intermediate Similarity NPD2346 Discontinued
0.7624 Intermediate Similarity NPD8397 Clinical (unspecified phase)
0.7622 Intermediate Similarity NPD7422 Clinical (unspecified phase)
0.7616 Intermediate Similarity NPD7199 Phase 2
0.7602 Intermediate Similarity NPD6234 Discontinued
0.7593 Intermediate Similarity NPD4628 Phase 3
0.758 Intermediate Similarity NPD1613 Approved
0.758 Intermediate Similarity NPD1612 Clinical (unspecified phase)
0.7564 Intermediate Similarity NPD2313 Discontinued
0.7556 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.7548 Intermediate Similarity NPD4908 Phase 1
0.7541 Intermediate Similarity NPD7879 Clinical (unspecified phase)
0.7532 Intermediate Similarity NPD230 Phase 1
0.753 Intermediate Similarity NPD6980 Clinical (unspecified phase)
0.753 Intermediate Similarity NPD920 Approved
0.7529 Intermediate Similarity NPD7184 Clinical (unspecified phase)
0.7516 Intermediate Similarity NPD2344 Approved
0.7515 Intermediate Similarity NPD7004 Clinical (unspecified phase)
0.7515 Intermediate Similarity NPD5401 Approved
0.75 Intermediate Similarity NPD4625 Phase 3
0.75 Intermediate Similarity NPD3751 Discontinued
0.7471 Intermediate Similarity NPD3787 Discontinued
0.7459 Intermediate Similarity NPD4360 Phase 2
0.7459 Intermediate Similarity NPD4363 Phase 3
0.7453 Intermediate Similarity NPD1551 Phase 2
0.7452 Intermediate Similarity NPD3268 Approved
0.7452 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.7447 Intermediate Similarity NPD7501 Clinical (unspecified phase)
0.7444 Intermediate Similarity NPD8313 Approved
0.7444 Intermediate Similarity NPD8312 Approved
0.744 Intermediate Similarity NPD7458 Discontinued
0.7421 Intermediate Similarity NPD447 Suspended
0.7419 Intermediate Similarity NPD2798 Approved
0.7418 Intermediate Similarity NPD8434 Phase 2
0.7412 Intermediate Similarity NPD37 Approved
0.741 Intermediate Similarity NPD642 Clinical (unspecified phase)
0.7401 Intermediate Similarity NPD7228 Approved
0.7394 Intermediate Similarity NPD643 Clinical (unspecified phase)
0.7389 Intermediate Similarity NPD3027 Phase 3
0.7384 Intermediate Similarity NPD4966 Approved
0.7384 Intermediate Similarity NPD4965 Approved
0.7384 Intermediate Similarity NPD4967 Phase 2
0.7378 Intermediate Similarity NPD7003 Approved
0.7378 Intermediate Similarity NPD8166 Discontinued
0.7374 Intermediate Similarity NPD5953 Discontinued
0.7371 Intermediate Similarity NPD7229 Phase 3
0.736 Intermediate Similarity NPD7286 Phase 2
0.7355 Intermediate Similarity NPD2797 Approved
0.7349 Intermediate Similarity NPD6143 Clinical (unspecified phase)
0.7346 Intermediate Similarity NPD5404 Approved
0.7346 Intermediate Similarity NPD5405 Approved
0.7346 Intermediate Similarity NPD5406 Approved
0.7346 Intermediate Similarity NPD5408 Approved
0.7337 Intermediate Similarity NPD5808 Clinical (unspecified phase)
0.7333 Intermediate Similarity NPD2309 Approved
0.7322 Intermediate Similarity NPD8150 Discontinued
0.732 Intermediate Similarity NPD1201 Approved
0.7287 Intermediate Similarity NPD8090 Clinical (unspecified phase)
0.7273 Intermediate Similarity NPD5710 Approved
0.7273 Intermediate Similarity NPD1608 Approved
0.7273 Intermediate Similarity NPD1878 Clinical (unspecified phase)
0.7273 Intermediate Similarity NPD5711 Approved
0.7267 Intermediate Similarity NPD5760 Phase 2
0.7267 Intermediate Similarity NPD5761 Phase 2
0.7263 Intermediate Similarity NPD6777 Approved
0.7263 Intermediate Similarity NPD6781 Approved
0.7263 Intermediate Similarity NPD6779 Approved
0.7263 Intermediate Similarity NPD6776 Approved
0.7263 Intermediate Similarity NPD6778 Approved
0.7263 Intermediate Similarity NPD6780 Approved
0.7263 Intermediate Similarity NPD6782 Approved
0.7262 Intermediate Similarity NPD6273 Approved
0.7244 Intermediate Similarity NPD1470 Approved
0.7244 Intermediate Similarity NPD1203 Approved
0.7238 Intermediate Similarity NPD7685 Pre-registration
0.7234 Intermediate Similarity NPD4361 Phase 2
0.7234 Intermediate Similarity NPD4362 Clinical (unspecified phase)
0.7233 Intermediate Similarity NPD6410 Clinical (unspecified phase)
0.7229 Intermediate Similarity NPD6190 Approved
0.7226 Intermediate Similarity NPD4749 Approved
0.7225 Intermediate Similarity NPD4288 Approved
0.7216 Intermediate Similarity NPD8127 Discontinued
0.7208 Intermediate Similarity NPD1610 Phase 2
0.7205 Intermediate Similarity NPD5124 Phase 1
0.7205 Intermediate Similarity NPD5123 Clinical (unspecified phase)
0.7186 Intermediate Similarity NPD3300 Phase 2
0.7178 Intermediate Similarity NPD4308 Phase 3
0.7178 Intermediate Similarity NPD7033 Discontinued
0.717 Intermediate Similarity NPD7095 Approved
0.7151 Intermediate Similarity NPD4287 Approved
0.715 Intermediate Similarity NPD7435 Discontinued
0.7143 Intermediate Similarity NPD4060 Phase 1
0.7143 Intermediate Similarity NPD8151 Discontinued
0.7134 Intermediate Similarity NPD3266 Approved
0.7134 Intermediate Similarity NPD3267 Approved
0.7128 Intermediate Similarity NPD7584 Approved
0.7125 Intermediate Similarity NPD3764 Approved
0.7115 Intermediate Similarity NPD4379 Clinical (unspecified phase)
0.7099 Intermediate Similarity NPD1933 Approved
0.7097 Intermediate Similarity NPD422 Phase 1
0.7095 Intermediate Similarity NPD2403 Approved
0.7078 Intermediate Similarity NPD17 Approved
0.7076 Intermediate Similarity NPD1653 Approved
0.7071 Intermediate Similarity NPD7783 Phase 2
0.7071 Intermediate Similarity NPD7782 Clinical (unspecified phase)
0.707 Intermediate Similarity NPD3225 Approved
0.7062 Intermediate Similarity NPD7697 Approved
0.7062 Intermediate Similarity NPD7696 Phase 3
0.7062 Intermediate Similarity NPD7698 Approved
0.7059 Intermediate Similarity NPD1548 Phase 1
0.7052 Intermediate Similarity NPD7615 Clinical (unspecified phase)
0.7051 Intermediate Similarity NPD9717 Approved
0.7051 Intermediate Similarity NPD3972 Approved
0.7051 Intermediate Similarity NPD9269 Phase 2
0.7047 Intermediate Similarity NPD2494 Approved
0.7047 Intermediate Similarity NPD2493 Approved
0.7044 Intermediate Similarity NPD9494 Approved
0.7026 Intermediate Similarity NPD7871 Phase 2
0.7026 Intermediate Similarity NPD7870 Phase 2
0.7026 Intermediate Similarity NPD4582 Approved
0.7026 Intermediate Similarity NPD4583 Approved

Structure

External Identifiers

PubChem CID   45269028
ChEMBL   CHEMBL561372
ZINC  

Physicochemical Properties

Molecular Weight:  440.18
ALogP:  -1.4194
MLogP:  3.44
XLogP:  3.604
# Rotatable Bonds:  11
Polar Surface Area:  127.45
# H-Bond Aceptor:  2
# H-Bond Donor:  5
# Rings:  4
# Heavy Atoms:  32

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
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Biological Activities  
Similar NPs/Drugs