Natural Product: NPC218226

Natural Product ID:  NPC218226
Common Name:   5,7,3'-Trihydroxy-4',5'-(2'''',2''''-Dimethylpyran)-8,2'-Di(3-Methyl-2-Butenyl)-(2S)-Flavanone
IUPAC Name:   (2S)-5,7-dihydroxy-2-[8-hydroxy-2,2-dimethyl-7-(3-methylbut-2-enyl)chromen-6-yl]-8-(3-methylbut-2-enyl)-2,3-dihydrochromen-4-one
Synonyms:  
Molecular Formula:   C30H34O6
Standard InCHIKey:  WHMJSNMIIPVCHC-VWLOTQADSA-N
Standard InCHI:  InChI=1S/C30H34O6/c1-16(2)7-9-19-21(13-18-11-12-30(5,6)36-28(18)27(19)34)25-15-24(33)26-23(32)14-22(31)20(29(26)35-25)10-8-17(3)4/h7-8,11-14,25,31-32,34H,9-10,15H2,1-6H3/t25-/m0/s1
Canonical SMILES:  CC(=CCc1c(cc2c(c1O)OC(C=C2)(C)C)[C@@H]1CC(=O)c2c(O1)c(CC=C(C)C)c(cc2O)O)C
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO32946 dendrolobium tanceolatum Species Fabaceae Eukaryota roots PMID[15217275]
NPO22556 Dendrolobium lanceolatum Species Fabaceae Eukaryota Root PMID[15217275]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT485 Organism Plasmodium falciparum (isolate K1 / Thailand) Plasmodium falciparum K1 IC50 = 2.6 ug/ml 15217275
NPT88 Organism Mycobacterium tuberculosis Mycobacterium tuberculosis MIC = 6.3 ug/ml 15217275
NPT91 Cell Line KB Homo sapiens IC50 = 1.2 ug/ml 15217275
NPT2 Others Unspecified IC50 = 1.7 ug/ml 15217275
NPT639 Cell Line NCI-H187 Homo sapiens IC50 = 0.6 ug/ml 15217275

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC218226 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9936 High Similarity NPC43319
0.9809 High Similarity NPC186686
0.9747 High Similarity NPC293319
0.9686 High Similarity NPC272502
0.9625 High Similarity NPC474024
0.9623 High Similarity NPC303174
0.962 High Similarity NPC201800
0.9618 High Similarity NPC119209
0.9618 High Similarity NPC36217
0.9618 High Similarity NPC118256
0.9618 High Similarity NPC192686
0.9563 High Similarity NPC39091
0.9563 High Similarity NPC37870
0.9557 High Similarity NPC474038
0.9557 High Similarity NPC471210
0.9554 High Similarity NPC85121
0.9554 High Similarity NPC210459
0.95 High Similarity NPC472450
0.95 High Similarity NPC239752
0.95 High Similarity NPC275780
0.9497 High Similarity NPC474150
0.9497 High Similarity NPC474162
0.9497 High Similarity NPC472964
0.9494 High Similarity NPC299436
0.9494 High Similarity NPC474960
0.9494 High Similarity NPC321399
0.9494 High Similarity NPC471973
0.9494 High Similarity NPC475784
0.949 High Similarity NPC284820
0.949 High Similarity NPC27337
0.949 High Similarity NPC473272
0.9437 High Similarity NPC472625
0.9437 High Similarity NPC189473
0.9437 High Similarity NPC23298
0.9437 High Similarity NPC236132
0.9437 High Similarity NPC207690
0.9434 High Similarity NPC471212
0.9434 High Similarity NPC472632
0.9434 High Similarity NPC472634
0.9434 High Similarity NPC26326
0.9434 High Similarity NPC471211
0.9427 High Similarity NPC291878
0.9427 High Similarity NPC472626
0.9427 High Similarity NPC470328
0.9427 High Similarity NPC35038
0.9427 High Similarity NPC24640
0.9427 High Similarity NPC209614
0.9427 High Similarity NPC278778
0.9427 High Similarity NPC195796
0.9383 High Similarity NPC477154
0.9383 High Similarity NPC6588
0.9383 High Similarity NPC117854
0.9379 High Similarity NPC62261
0.9379 High Similarity NPC475888
0.9375 High Similarity NPC474034
0.9375 High Similarity NPC474033
0.9375 High Similarity NPC211107
0.9375 High Similarity NPC229632
0.9371 High Similarity NPC472631
0.9371 High Similarity NPC472630
0.9371 High Similarity NPC472902
0.9371 High Similarity NPC174953
0.9371 High Similarity NPC472624
0.9367 High Similarity NPC52889
0.9367 High Similarity NPC472598
0.9367 High Similarity NPC472963
0.9367 High Similarity NPC136674
0.9367 High Similarity NPC474055
0.9367 High Similarity NPC291508
0.9367 High Similarity NPC471209
0.9363 High Similarity NPC67396
0.9363 High Similarity NPC477503
0.9363 High Similarity NPC226025
0.9363 High Similarity NPC470327
0.9363 High Similarity NPC45849
0.9363 High Similarity NPC200761
0.9329 High Similarity NPC4200
0.9325 High Similarity NPC288813
0.9325 High Similarity NPC476637
0.9321 High Similarity NPC472449
0.9321 High Similarity NPC471213
0.9321 High Similarity NPC170245
0.9317 High Similarity NPC236521
0.9317 High Similarity NPC152659
0.9317 High Similarity NPC197168
0.9317 High Similarity NPC474240
0.9317 High Similarity NPC270837
0.9317 High Similarity NPC248638
0.9317 High Similarity NPC7483
0.9313 High Similarity NPC134783
0.9313 High Similarity NPC474187
0.9313 High Similarity NPC61010
0.9313 High Similarity NPC40491
0.9313 High Similarity NPC278052
0.9313 High Similarity NPC474186
0.9308 High Similarity NPC473990
0.9308 High Similarity NPC184755
0.9308 High Similarity NPC204879
0.9308 High Similarity NPC53545
0.9308 High Similarity NPC117418
0.9308 High Similarity NPC74178
0.9304 High Similarity NPC472907
0.9304 High Similarity NPC471985
0.9299 High Similarity NPC18727
0.9299 High Similarity NPC213896
0.9299 High Similarity NPC192083
0.9299 High Similarity NPC74924
0.9299 High Similarity NPC298692
0.9264 High Similarity NPC150131
0.9264 High Similarity NPC126204
0.9259 High Similarity NPC25361
0.9259 High Similarity NPC326520
0.9255 High Similarity NPC472448
0.9255 High Similarity NPC476247
0.9255 High Similarity NPC472635
0.9255 High Similarity NPC25152
0.9255 High Similarity NPC329760
0.9255 High Similarity NPC83922
0.9255 High Similarity NPC294965
0.925 High Similarity NPC470183
0.925 High Similarity NPC56085
0.925 High Similarity NPC282009
0.925 High Similarity NPC328102
0.925 High Similarity NPC228785
0.925 High Similarity NPC287328
0.925 High Similarity NPC204290
0.925 High Similarity NPC119224
0.925 High Similarity NPC139036
0.925 High Similarity NPC474287
0.925 High Similarity NPC475886
0.925 High Similarity NPC320359
0.925 High Similarity NPC14353
0.9245 High Similarity NPC474681
0.9245 High Similarity NPC218313
0.9245 High Similarity NPC273843
0.9245 High Similarity NPC223787
0.9241 High Similarity NPC321779
0.9241 High Similarity NPC234255
0.9236 High Similarity NPC236637
0.9236 High Similarity NPC471982
0.9236 High Similarity NPC106976
0.9236 High Similarity NPC302950
0.9236 High Similarity NPC219582
0.9207 High Similarity NPC165456
0.9207 High Similarity NPC300307
0.9207 High Similarity NPC188079
0.9202 High Similarity NPC120593
0.9202 High Similarity NPC477517
0.9198 High Similarity NPC475985
0.9198 High Similarity NPC124038
0.9198 High Similarity NPC12461
0.9198 High Similarity NPC476295
0.9198 High Similarity NPC220313
0.9193 High Similarity NPC278427
0.9193 High Similarity NPC474239
0.9193 High Similarity NPC471499
0.9193 High Similarity NPC474351
0.9193 High Similarity NPC173137
0.9193 High Similarity NPC158188
0.9193 High Similarity NPC234644
0.9193 High Similarity NPC142252
0.9193 High Similarity NPC66288
0.9193 High Similarity NPC289771
0.9193 High Similarity NPC29876
0.9193 High Similarity NPC167678
0.9193 High Similarity NPC475883
0.9193 High Similarity NPC57715
0.9187 High Similarity NPC250214
0.9187 High Similarity NPC469658
0.9187 High Similarity NPC280680
0.9187 High Similarity NPC100123
0.9187 High Similarity NPC95936
0.9187 High Similarity NPC22192
0.9187 High Similarity NPC474290
0.9187 High Similarity NPC476242
0.9187 High Similarity NPC235448
0.9182 High Similarity NPC133970
0.9182 High Similarity NPC282307
0.9182 High Similarity NPC6633
0.9182 High Similarity NPC13779
0.9182 High Similarity NPC170026
0.9182 High Similarity NPC475799
0.9182 High Similarity NPC5322
0.9182 High Similarity NPC472455
0.9177 High Similarity NPC169990
0.9177 High Similarity NPC210942
0.9177 High Similarity NPC472905
0.9177 High Similarity NPC93552
0.9177 High Similarity NPC170492
0.9152 High Similarity NPC472276
0.9152 High Similarity NPC101107
0.9146 High Similarity NPC476306
0.9141 High Similarity NPC472277
0.9141 High Similarity NPC224280
0.9141 High Similarity NPC156432
0.9141 High Similarity NPC300053
0.9141 High Similarity NPC108433
0.9136 High Similarity NPC78332
0.9136 High Similarity NPC194427
0.9136 High Similarity NPC206605

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC218226 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.9299 High Similarity NPD2393 Clinical (unspecified phase)
0.9236 High Similarity NPD1934 Approved
0.8938 High Similarity NPD2801 Approved
0.8909 High Similarity NPD6168 Clinical (unspecified phase)
0.8909 High Similarity NPD6167 Clinical (unspecified phase)
0.8909 High Similarity NPD6166 Phase 2
0.8862 High Similarity NPD7054 Approved
0.881 High Similarity NPD7074 Phase 3
0.881 High Similarity NPD7472 Approved
0.875 High Similarity NPD4380 Phase 2
0.875 High Similarity NPD5844 Phase 1
0.8743 High Similarity NPD7473 Discontinued
0.8727 High Similarity NPD6959 Discontinued
0.8726 High Similarity NPD1511 Approved
0.8675 High Similarity NPD6232 Discontinued
0.8667 High Similarity NPD5494 Approved
0.8616 High Similarity NPD1512 Approved
0.8598 High Similarity NPD3882 Suspended
0.8596 High Similarity NPD7251 Discontinued
0.8589 High Similarity NPD7819 Suspended
0.858 High Similarity NPD3818 Discontinued
0.8553 High Similarity NPD4378 Clinical (unspecified phase)
0.8547 High Similarity NPD7808 Phase 3
0.8545 High Similarity NPD7075 Discontinued
0.8538 High Similarity NPD6797 Phase 2
0.8537 High Similarity NPD8443 Clinical (unspecified phase)
0.8537 High Similarity NPD3817 Phase 2
0.8485 Intermediate Similarity NPD4868 Clinical (unspecified phase)
0.8476 Intermediate Similarity NPD7096 Clinical (unspecified phase)
0.8439 Intermediate Similarity NPD4338 Clinical (unspecified phase)
0.8434 Intermediate Similarity NPD4381 Clinical (unspecified phase)
0.8421 Intermediate Similarity NPD7804 Clinical (unspecified phase)
0.8344 Intermediate Similarity NPD1552 Clinical (unspecified phase)
0.8344 Intermediate Similarity NPD1550 Clinical (unspecified phase)
0.8323 Intermediate Similarity NPD7410 Clinical (unspecified phase)
0.8291 Intermediate Similarity NPD1549 Phase 2
0.8253 Intermediate Similarity NPD1465 Phase 2
0.8193 Intermediate Similarity NPD6801 Discontinued
0.8171 Intermediate Similarity NPD6559 Discontinued
0.8165 Intermediate Similarity NPD2796 Approved
0.8156 Intermediate Similarity NPD8397 Clinical (unspecified phase)
0.8133 Intermediate Similarity NPD7411 Suspended
0.8101 Intermediate Similarity NPD1510 Phase 2
0.8098 Intermediate Similarity NPD2534 Approved
0.8098 Intermediate Similarity NPD2533 Approved
0.8098 Intermediate Similarity NPD2532 Approved
0.8072 Intermediate Similarity NPD6599 Discontinued
0.8066 Intermediate Similarity NPD7879 Clinical (unspecified phase)
0.8011 Intermediate Similarity NPD7993 Clinical (unspecified phase)
0.7975 Intermediate Similarity NPD1607 Approved
0.7963 Intermediate Similarity NPD3750 Approved
0.795 Intermediate Similarity NPD970 Clinical (unspecified phase)
0.7941 Intermediate Similarity NPD7768 Phase 2
0.7937 Intermediate Similarity NPD6100 Approved
0.7937 Intermediate Similarity NPD6099 Approved
0.7931 Intermediate Similarity NPD7852 Clinical (unspecified phase)
0.7927 Intermediate Similarity NPD6799 Approved
0.7895 Intermediate Similarity NPD3749 Approved
0.7889 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.7882 Intermediate Similarity NPD5402 Approved
0.7877 Intermediate Similarity NPD8313 Approved
0.7877 Intermediate Similarity NPD8312 Approved
0.7861 Intermediate Similarity NPD1247 Approved
0.7861 Intermediate Similarity NPD7501 Clinical (unspecified phase)
0.7849 Intermediate Similarity NPD919 Approved
0.7849 Intermediate Similarity NPD6234 Discontinued
0.7848 Intermediate Similarity NPD1612 Clinical (unspecified phase)
0.7848 Intermediate Similarity NPD1613 Approved
0.7848 Intermediate Similarity NPD1240 Approved
0.7841 Intermediate Similarity NPD7228 Approved
0.7818 Intermediate Similarity NPD7390 Discontinued
0.7798 Intermediate Similarity NPD3226 Approved
0.7784 Intermediate Similarity NPD5403 Approved
0.7778 Intermediate Similarity NPD2346 Discontinued
0.7764 Intermediate Similarity NPD1509 Clinical (unspecified phase)
0.7747 Intermediate Similarity NPD8150 Discontinued
0.7744 Intermediate Similarity NPD4628 Phase 3
0.774 Intermediate Similarity NPD3751 Discontinued
0.7736 Intermediate Similarity NPD943 Approved
0.7714 Intermediate Similarity NPD3787 Discontinued
0.7707 Intermediate Similarity NPD1529 Clinical (unspecified phase)
0.7683 Intermediate Similarity NPD2800 Approved
0.7672 Intermediate Similarity NPD6778 Approved
0.7672 Intermediate Similarity NPD6776 Approved
0.7672 Intermediate Similarity NPD6777 Approved
0.7672 Intermediate Similarity NPD6779 Approved
0.7672 Intermediate Similarity NPD6781 Approved
0.7672 Intermediate Similarity NPD6780 Approved
0.7672 Intermediate Similarity NPD6782 Approved
0.767 Intermediate Similarity NPD3926 Phase 2
0.7665 Intermediate Similarity NPD5401 Approved
0.7665 Intermediate Similarity NPD7422 Clinical (unspecified phase)
0.7661 Intermediate Similarity NPD37 Approved
0.7658 Intermediate Similarity NPD4625 Phase 3
0.7658 Intermediate Similarity NPD3027 Phase 3
0.7657 Intermediate Similarity NPD7199 Phase 2
0.7654 Intermediate Similarity NPD3748 Approved
0.7644 Intermediate Similarity NPD7435 Discontinued
0.7643 Intermediate Similarity NPD1530 Clinical (unspecified phase)
0.7636 Intermediate Similarity NPD6398 Clinical (unspecified phase)
0.763 Intermediate Similarity NPD4965 Approved
0.763 Intermediate Similarity NPD4967 Phase 2
0.763 Intermediate Similarity NPD4966 Approved
0.7629 Intermediate Similarity NPD8151 Discontinued
0.7614 Intermediate Similarity NPD5710 Approved
0.7614 Intermediate Similarity NPD5711 Approved
0.7607 Intermediate Similarity NPD1551 Phase 2
0.7607 Intermediate Similarity NPD2935 Discontinued
0.7588 Intermediate Similarity NPD5808 Clinical (unspecified phase)
0.7576 Intermediate Similarity NPD7421 Clinical (unspecified phase)
0.7571 Intermediate Similarity NPD7184 Clinical (unspecified phase)
0.7569 Intermediate Similarity NPD7685 Pre-registration
0.7552 Intermediate Similarity NPD7696 Phase 3
0.7552 Intermediate Similarity NPD7697 Approved
0.7552 Intermediate Similarity NPD7698 Approved
0.7551 Intermediate Similarity NPD7783 Phase 2
0.7551 Intermediate Similarity NPD7782 Clinical (unspecified phase)
0.7546 Intermediate Similarity NPD651 Clinical (unspecified phase)
0.7527 Intermediate Similarity NPD4419 Clinical (unspecified phase)
0.7513 Intermediate Similarity NPD7870 Phase 2
0.7513 Intermediate Similarity NPD7871 Phase 2
0.75 Intermediate Similarity NPD6823 Phase 2
0.75 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD4907 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD4363 Phase 3
0.75 Intermediate Similarity NPD4360 Phase 2
0.7487 Intermediate Similarity NPD7701 Phase 2
0.7471 Intermediate Similarity NPD6980 Clinical (unspecified phase)
0.7471 Intermediate Similarity NPD920 Approved
0.747 Intermediate Similarity NPD6674 Discontinued
0.7469 Intermediate Similarity NPD230 Phase 1
0.7459 Intermediate Similarity NPD8434 Phase 2
0.7456 Intermediate Similarity NPD7004 Clinical (unspecified phase)
0.7436 Intermediate Similarity NPD7584 Approved
0.7427 Intermediate Similarity NPD1653 Approved
0.7423 Intermediate Similarity NPD6651 Approved
0.7421 Intermediate Similarity NPD8090 Clinical (unspecified phase)
0.7411 Intermediate Similarity NPD7874 Approved
0.7411 Intermediate Similarity NPD7875 Clinical (unspecified phase)
0.7407 Intermediate Similarity NPD6535 Approved
0.7407 Intermediate Similarity NPD6534 Approved
0.7403 Intermediate Similarity NPD7286 Phase 2
0.7384 Intermediate Similarity NPD7458 Discontinued
0.7382 Intermediate Similarity NPD7699 Phase 2
0.7382 Intermediate Similarity NPD7700 Phase 2
0.7377 Intermediate Similarity NPD7240 Approved
0.7375 Intermediate Similarity NPD4908 Phase 1
0.7374 Intermediate Similarity NPD7801 Approved
0.7365 Intermediate Similarity NPD5698 Clinical (unspecified phase)
0.7365 Intermediate Similarity NPD1243 Approved
0.7362 Intermediate Similarity NPD447 Suspended
0.7353 Intermediate Similarity NPD642 Clinical (unspecified phase)
0.7337 Intermediate Similarity NPD643 Clinical (unspecified phase)
0.7333 Intermediate Similarity NPD2799 Discontinued
0.7322 Intermediate Similarity NPD5953 Discontinued
0.7318 Intermediate Similarity NPD7229 Phase 3
0.7294 Intermediate Similarity NPD6143 Clinical (unspecified phase)
0.7289 Intermediate Similarity NPD5408 Approved
0.7289 Intermediate Similarity NPD5404 Approved
0.7289 Intermediate Similarity NPD5405 Approved
0.7289 Intermediate Similarity NPD5406 Approved
0.7284 Intermediate Similarity NPD6410 Clinical (unspecified phase)
0.7284 Intermediate Similarity NPD2313 Discontinued
0.7278 Intermediate Similarity NPD6190 Approved
0.7268 Intermediate Similarity NPD2494 Approved
0.7268 Intermediate Similarity NPD2493 Approved
0.7263 Intermediate Similarity NPD8127 Discontinued
0.7256 Intermediate Similarity NPD5124 Phase 1
0.7256 Intermediate Similarity NPD5123 Clinical (unspecified phase)
0.7256 Intermediate Similarity NPD1933 Approved
0.7254 Intermediate Similarity NPD8285 Discontinued
0.7246 Intermediate Similarity NPD2344 Approved
0.7245 Intermediate Similarity NPD8319 Approved
0.7245 Intermediate Similarity NPD8320 Phase 1
0.7229 Intermediate Similarity NPD7033 Discontinued
0.722 Intermediate Similarity NPD7907 Approved
0.7219 Intermediate Similarity NPD1878 Clinical (unspecified phase)
0.7216 Intermediate Similarity NPD8455 Phase 2
0.7205 Intermediate Similarity NPD9494 Approved
0.72 Intermediate Similarity NPD7615 Clinical (unspecified phase)
0.7195 Intermediate Similarity NPD4060 Phase 1
0.7179 Intermediate Similarity NPD3452 Approved
0.7179 Intermediate Similarity NPD3450 Approved
0.717 Intermediate Similarity NPD4379 Clinical (unspecified phase)
0.717 Intermediate Similarity NPD4749 Approved
0.7159 Intermediate Similarity NPD6844 Discontinued
0.7158 Intermediate Similarity NPD7177 Discontinued
0.7157 Intermediate Similarity NPD4582 Approved
0.7157 Intermediate Similarity NPD4583 Approved
0.7152 Intermediate Similarity NPD1201 Approved
0.7152 Intermediate Similarity NPD1610 Phase 2
0.7152 Intermediate Similarity NPD1547 Clinical (unspecified phase)
0.7126 Intermediate Similarity NPD4308 Phase 3
0.7122 Intermediate Similarity NPD4665 Approved
0.7122 Intermediate Similarity NPD4111 Phase 1
0.7119 Intermediate Similarity NPD5761 Phase 2
0.7119 Intermediate Similarity NPD5760 Phase 2
0.7118 Intermediate Similarity NPD8166 Discontinued
0.7118 Intermediate Similarity NPD7003 Approved
0.711 Intermediate Similarity NPD6273 Approved

Structure

External Identifiers

PubChem CID   3012485
ChEMBL   CHEMBL511455
ZINC  

Physicochemical Properties

Molecular Weight:  490.24
ALogP:  2.8482
MLogP:  4.1
XLogP:  4.274
# Rotatable Bonds:  14
Polar Surface Area:  96.22
# H-Bond Aceptor:  1
# H-Bond Donor:  3
# Rings:  4
# Heavy Atoms:  36

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs