Natural Product: NPC43319

Natural Product ID:  NPC43319
Common Name:   Sigmoidin F
IUPAC Name:   (2R)-5,7-dihydroxy-2-[8-hydroxy-2,2-dimethyl-7-(3-methylbut-2-enyl)chromen-6-yl]-2,3-dihydrochromen-4-one
Synonyms:   Sigmoidin F
Molecular Formula:   C25H26O6
Standard InCHIKey:  WPVMLODCRMLWMB-HXUWFJFHSA-N
Standard InCHI:  InChI=1S/C25H26O6/c1-13(2)5-6-16-17(9-14-7-8-25(3,4)31-24(14)23(16)29)20-12-19(28)22-18(27)10-15(26)11-21(22)30-20/h5,7-11,20,26-27,29H,6,12H2,1-4H3/t20-/m1/s1
Canonical SMILES:  CC(=CCc1c(cc2c(c1O)OC(C=C2)(C)C)[C@H]1CC(=O)c2c(O1)cc(cc2O)O)C
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO8526 Erythrina abyssinica Species Fabaceae Eukaryota Stem barks PMID[17489632]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT178 Individual Protein Protein-tyrosine phosphatase 1B Homo sapiens IC50 = 14200 nM 16792413

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC43319 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9936 High Similarity NPC218226
0.9872 High Similarity NPC186686
0.9747 High Similarity NPC272502
0.9686 High Similarity NPC474024
0.9684 High Similarity NPC303174
0.9684 High Similarity NPC293319
0.9679 High Similarity NPC36217
0.9679 High Similarity NPC119209
0.9679 High Similarity NPC192686
0.9679 High Similarity NPC118256
0.9623 High Similarity NPC37870
0.9618 High Similarity NPC474038
0.9615 High Similarity NPC85121
0.956 High Similarity NPC239752
0.956 High Similarity NPC472450
0.956 High Similarity NPC275780
0.9557 High Similarity NPC474150
0.9557 High Similarity NPC474162
0.9557 High Similarity NPC201800
0.9554 High Similarity NPC471973
0.9554 High Similarity NPC474960
0.9554 High Similarity NPC475784
0.9551 High Similarity NPC27337
0.9551 High Similarity NPC473272
0.9551 High Similarity NPC284820
0.95 High Similarity NPC39091
0.9497 High Similarity NPC472625
0.9497 High Similarity NPC189473
0.9497 High Similarity NPC23298
0.9497 High Similarity NPC207690
0.9494 High Similarity NPC472632
0.9494 High Similarity NPC471210
0.9494 High Similarity NPC26326
0.949 High Similarity NPC210459
0.9487 High Similarity NPC291878
0.9487 High Similarity NPC195796
0.9487 High Similarity NPC24640
0.9487 High Similarity NPC35038
0.9487 High Similarity NPC278778
0.9441 High Similarity NPC6588
0.9441 High Similarity NPC117854
0.9441 High Similarity NPC477154
0.9437 High Similarity NPC62261
0.9434 High Similarity NPC229632
0.9434 High Similarity NPC472964
0.9434 High Similarity NPC474033
0.9434 High Similarity NPC474034
0.943 High Similarity NPC472624
0.943 High Similarity NPC174953
0.943 High Similarity NPC299436
0.943 High Similarity NPC472902
0.943 High Similarity NPC321399
0.9427 High Similarity NPC472598
0.9427 High Similarity NPC52889
0.9427 High Similarity NPC474055
0.9427 High Similarity NPC136674
0.9427 High Similarity NPC291508
0.9427 High Similarity NPC471209
0.9423 High Similarity NPC200761
0.9423 High Similarity NPC470327
0.9423 High Similarity NPC67396
0.9423 High Similarity NPC477503
0.9423 High Similarity NPC45849
0.9387 High Similarity NPC4200
0.9383 High Similarity NPC288813
0.9383 High Similarity NPC476637
0.9379 High Similarity NPC170245
0.9379 High Similarity NPC472449
0.9375 High Similarity NPC236521
0.9375 High Similarity NPC152659
0.9375 High Similarity NPC270837
0.9375 High Similarity NPC248638
0.9375 High Similarity NPC197168
0.9375 High Similarity NPC236132
0.9371 High Similarity NPC471212
0.9371 High Similarity NPC472634
0.9371 High Similarity NPC61010
0.9371 High Similarity NPC471211
0.9371 High Similarity NPC134783
0.9367 High Similarity NPC473990
0.9367 High Similarity NPC74178
0.9367 High Similarity NPC204879
0.9367 High Similarity NPC53545
0.9367 High Similarity NPC184755
0.9367 High Similarity NPC117418
0.9363 High Similarity NPC470328
0.9363 High Similarity NPC472626
0.9363 High Similarity NPC209614
0.9363 High Similarity NPC471985
0.9359 High Similarity NPC192083
0.9359 High Similarity NPC74924
0.9359 High Similarity NPC18727
0.9359 High Similarity NPC213896
0.9321 High Similarity NPC150131
0.9317 High Similarity NPC25361
0.9317 High Similarity NPC326520
0.9317 High Similarity NPC475888
0.9313 High Similarity NPC294965
0.9313 High Similarity NPC472635
0.9313 High Similarity NPC83922
0.9313 High Similarity NPC472448
0.9313 High Similarity NPC25152
0.9313 High Similarity NPC476247
0.9313 High Similarity NPC211107
0.9313 High Similarity NPC329760
0.9308 High Similarity NPC287328
0.9308 High Similarity NPC472630
0.9308 High Similarity NPC282009
0.9308 High Similarity NPC139036
0.9308 High Similarity NPC204290
0.9308 High Similarity NPC228785
0.9308 High Similarity NPC472631
0.9308 High Similarity NPC328102
0.9308 High Similarity NPC14353
0.9308 High Similarity NPC56085
0.9304 High Similarity NPC472963
0.9304 High Similarity NPC218313
0.9304 High Similarity NPC474681
0.9304 High Similarity NPC223787
0.9299 High Similarity NPC234255
0.9299 High Similarity NPC226025
0.9299 High Similarity NPC321779
0.9295 High Similarity NPC471982
0.9295 High Similarity NPC219582
0.9295 High Similarity NPC106976
0.9295 High Similarity NPC302950
0.9295 High Similarity NPC236637
0.9264 High Similarity NPC188079
0.9264 High Similarity NPC165456
0.9264 High Similarity NPC300307
0.9259 High Similarity NPC120593
0.9259 High Similarity NPC477517
0.9259 High Similarity NPC471213
0.9255 High Similarity NPC124038
0.9255 High Similarity NPC474240
0.9255 High Similarity NPC7483
0.9255 High Similarity NPC475985
0.9255 High Similarity NPC12461
0.9255 High Similarity NPC220313
0.9255 High Similarity NPC476295
0.925 High Similarity NPC471499
0.925 High Similarity NPC234644
0.925 High Similarity NPC142252
0.925 High Similarity NPC57715
0.925 High Similarity NPC29876
0.925 High Similarity NPC167678
0.925 High Similarity NPC474186
0.925 High Similarity NPC40491
0.925 High Similarity NPC289771
0.925 High Similarity NPC66288
0.925 High Similarity NPC278052
0.925 High Similarity NPC474187
0.925 High Similarity NPC173137
0.9245 High Similarity NPC476242
0.9245 High Similarity NPC235448
0.9245 High Similarity NPC100123
0.9245 High Similarity NPC474290
0.9245 High Similarity NPC95936
0.9245 High Similarity NPC22192
0.9245 High Similarity NPC280680
0.9245 High Similarity NPC250214
0.9241 High Similarity NPC170026
0.9241 High Similarity NPC6633
0.9241 High Similarity NPC133970
0.9241 High Similarity NPC5322
0.9241 High Similarity NPC472455
0.9241 High Similarity NPC472907
0.9241 High Similarity NPC282307
0.9236 High Similarity NPC170492
0.9236 High Similarity NPC93552
0.9236 High Similarity NPC298692
0.9236 High Similarity NPC472905
0.9207 High Similarity NPC101107
0.9207 High Similarity NPC472276
0.9202 High Similarity NPC476306
0.9202 High Similarity NPC126204
0.9198 High Similarity NPC156432
0.9198 High Similarity NPC300053
0.9198 High Similarity NPC472277
0.9198 High Similarity NPC108433
0.9198 High Similarity NPC224280
0.9193 High Similarity NPC261470
0.9193 High Similarity NPC472402
0.9193 High Similarity NPC194427
0.9193 High Similarity NPC206605
0.9193 High Similarity NPC78332
0.9187 High Similarity NPC200746
0.9187 High Similarity NPC476280
0.9187 High Similarity NPC188433
0.9187 High Similarity NPC320359
0.9187 High Similarity NPC476283
0.9187 High Similarity NPC470183
0.9187 High Similarity NPC475886
0.9187 High Similarity NPC119224
0.9187 High Similarity NPC470810
0.9187 High Similarity NPC474287
0.9187 High Similarity NPC470326
0.9187 High Similarity NPC297212
0.9187 High Similarity NPC476980
0.9182 High Similarity NPC475267

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC43319 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.9359 High Similarity NPD2393 Clinical (unspecified phase)
0.9295 High Similarity NPD1934 Approved
0.8994 High Similarity NPD2801 Approved
0.8963 High Similarity NPD6168 Clinical (unspecified phase)
0.8963 High Similarity NPD6167 Clinical (unspecified phase)
0.8963 High Similarity NPD6166 Phase 2
0.8805 High Similarity NPD4380 Phase 2
0.8802 High Similarity NPD5844 Phase 1
0.8802 High Similarity NPD7054 Approved
0.8782 High Similarity NPD1511 Approved
0.878 High Similarity NPD6959 Discontinued
0.875 High Similarity NPD7472 Approved
0.875 High Similarity NPD7074 Phase 3
0.8727 High Similarity NPD6232 Discontinued
0.872 High Similarity NPD5494 Approved
0.8683 High Similarity NPD7473 Discontinued
0.8671 High Similarity NPD1512 Approved
0.865 High Similarity NPD3882 Suspended
0.8631 High Similarity NPD3818 Discontinued
0.8608 High Similarity NPD4378 Clinical (unspecified phase)
0.8589 High Similarity NPD3817 Phase 2
0.8588 High Similarity NPD6797 Phase 2
0.8538 High Similarity NPD7251 Discontinued
0.8537 High Similarity NPD4868 Clinical (unspecified phase)
0.8528 High Similarity NPD7819 Suspended
0.8488 Intermediate Similarity NPD4338 Clinical (unspecified phase)
0.8488 Intermediate Similarity NPD7808 Phase 3
0.8485 Intermediate Similarity NPD7075 Discontinued
0.8485 Intermediate Similarity NPD4381 Clinical (unspecified phase)
0.8476 Intermediate Similarity NPD8443 Clinical (unspecified phase)
0.8415 Intermediate Similarity NPD7096 Clinical (unspecified phase)
0.8397 Intermediate Similarity NPD1550 Clinical (unspecified phase)
0.8397 Intermediate Similarity NPD1552 Clinical (unspecified phase)
0.8375 Intermediate Similarity NPD7410 Clinical (unspecified phase)
0.8363 Intermediate Similarity NPD7804 Clinical (unspecified phase)
0.8344 Intermediate Similarity NPD1549 Phase 2
0.8303 Intermediate Similarity NPD1465 Phase 2
0.8242 Intermediate Similarity NPD6801 Discontinued
0.8218 Intermediate Similarity NPD6559 Discontinued
0.8217 Intermediate Similarity NPD2796 Approved
0.8182 Intermediate Similarity NPD7411 Suspended
0.8153 Intermediate Similarity NPD1510 Phase 2
0.8148 Intermediate Similarity NPD2532 Approved
0.8148 Intermediate Similarity NPD2534 Approved
0.8148 Intermediate Similarity NPD2533 Approved
0.8121 Intermediate Similarity NPD6599 Discontinued
0.8101 Intermediate Similarity NPD8397 Clinical (unspecified phase)
0.8057 Intermediate Similarity NPD7993 Clinical (unspecified phase)
0.8025 Intermediate Similarity NPD1607 Approved
0.8012 Intermediate Similarity NPD3750 Approved
0.8011 Intermediate Similarity NPD7879 Clinical (unspecified phase)
0.8 Intermediate Similarity NPD970 Clinical (unspecified phase)
0.7977 Intermediate Similarity NPD7852 Clinical (unspecified phase)
0.7975 Intermediate Similarity NPD6799 Approved
0.7941 Intermediate Similarity NPD3749 Approved
0.7929 Intermediate Similarity NPD5402 Approved
0.7907 Intermediate Similarity NPD1247 Approved
0.7898 Intermediate Similarity NPD1612 Clinical (unspecified phase)
0.7898 Intermediate Similarity NPD1240 Approved
0.7898 Intermediate Similarity NPD1613 Approved
0.7895 Intermediate Similarity NPD6234 Discontinued
0.7895 Intermediate Similarity NPD919 Approved
0.7882 Intermediate Similarity NPD7768 Phase 2
0.7875 Intermediate Similarity NPD6100 Approved
0.7875 Intermediate Similarity NPD6099 Approved
0.7866 Intermediate Similarity NPD7390 Discontinued
0.7844 Intermediate Similarity NPD3226 Approved
0.7833 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.7831 Intermediate Similarity NPD5403 Approved
0.7826 Intermediate Similarity NPD2346 Discontinued
0.7821 Intermediate Similarity NPD8312 Approved
0.7821 Intermediate Similarity NPD8313 Approved
0.7812 Intermediate Similarity NPD1509 Clinical (unspecified phase)
0.7807 Intermediate Similarity NPD7501 Clinical (unspecified phase)
0.7791 Intermediate Similarity NPD4628 Phase 3
0.7785 Intermediate Similarity NPD943 Approved
0.7784 Intermediate Similarity NPD7228 Approved
0.7784 Intermediate Similarity NPD3751 Discontinued
0.7759 Intermediate Similarity NPD3787 Discontinued
0.7756 Intermediate Similarity NPD1529 Clinical (unspecified phase)
0.773 Intermediate Similarity NPD2800 Approved
0.7714 Intermediate Similarity NPD3926 Phase 2
0.7713 Intermediate Similarity NPD6779 Approved
0.7713 Intermediate Similarity NPD6776 Approved
0.7713 Intermediate Similarity NPD6780 Approved
0.7713 Intermediate Similarity NPD6781 Approved
0.7713 Intermediate Similarity NPD6782 Approved
0.7713 Intermediate Similarity NPD6777 Approved
0.7713 Intermediate Similarity NPD6778 Approved
0.7711 Intermediate Similarity NPD5401 Approved
0.7711 Intermediate Similarity NPD7422 Clinical (unspecified phase)
0.7707 Intermediate Similarity NPD3027 Phase 3
0.7707 Intermediate Similarity NPD4625 Phase 3
0.7706 Intermediate Similarity NPD37 Approved
0.7702 Intermediate Similarity NPD3748 Approved
0.7701 Intermediate Similarity NPD7199 Phase 2
0.7692 Intermediate Similarity NPD1530 Clinical (unspecified phase)
0.7692 Intermediate Similarity NPD8150 Discontinued
0.7674 Intermediate Similarity NPD4967 Phase 2
0.7674 Intermediate Similarity NPD4966 Approved
0.7674 Intermediate Similarity NPD4965 Approved
0.7657 Intermediate Similarity NPD5710 Approved
0.7657 Intermediate Similarity NPD5711 Approved
0.7654 Intermediate Similarity NPD2935 Discontinued
0.7654 Intermediate Similarity NPD1551 Phase 2
0.7633 Intermediate Similarity NPD5808 Clinical (unspecified phase)
0.7622 Intermediate Similarity NPD7421 Clinical (unspecified phase)
0.7614 Intermediate Similarity NPD7184 Clinical (unspecified phase)
0.7593 Intermediate Similarity NPD651 Clinical (unspecified phase)
0.7592 Intermediate Similarity NPD7435 Discontinued
0.7577 Intermediate Similarity NPD8151 Discontinued
0.7576 Intermediate Similarity NPD6398 Clinical (unspecified phase)
0.7569 Intermediate Similarity NPD4419 Clinical (unspecified phase)
0.7547 Intermediate Similarity NPD4907 Clinical (unspecified phase)
0.754 Intermediate Similarity NPD4360 Phase 2
0.754 Intermediate Similarity NPD4363 Phase 3
0.7516 Intermediate Similarity NPD230 Phase 1
0.7515 Intermediate Similarity NPD6980 Clinical (unspecified phase)
0.7515 Intermediate Similarity NPD920 Approved
0.7514 Intermediate Similarity NPD7685 Pre-registration
0.75 Intermediate Similarity NPD7698 Approved
0.75 Intermediate Similarity NPD7782 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD7783 Phase 2
0.75 Intermediate Similarity NPD7004 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD7696 Phase 3
0.75 Intermediate Similarity NPD7697 Approved
0.7471 Intermediate Similarity NPD1653 Approved
0.7461 Intermediate Similarity NPD7870 Phase 2
0.7461 Intermediate Similarity NPD7871 Phase 2
0.7448 Intermediate Similarity NPD6823 Phase 2
0.7447 Intermediate Similarity NPD6534 Approved
0.7447 Intermediate Similarity NPD6535 Approved
0.7438 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.7436 Intermediate Similarity NPD7701 Phase 2
0.7421 Intermediate Similarity NPD4908 Phase 1
0.741 Intermediate Similarity NPD1243 Approved
0.741 Intermediate Similarity NPD6674 Discontinued
0.741 Intermediate Similarity NPD5698 Clinical (unspecified phase)
0.7407 Intermediate Similarity NPD447 Suspended
0.7405 Intermediate Similarity NPD8434 Phase 2
0.7396 Intermediate Similarity NPD642 Clinical (unspecified phase)
0.7385 Intermediate Similarity NPD7584 Approved
0.7381 Intermediate Similarity NPD643 Clinical (unspecified phase)
0.7378 Intermediate Similarity NPD2799 Discontinued
0.7368 Intermediate Similarity NPD8090 Clinical (unspecified phase)
0.7363 Intermediate Similarity NPD5953 Discontinued
0.7362 Intermediate Similarity NPD6651 Approved
0.736 Intermediate Similarity NPD7875 Clinical (unspecified phase)
0.736 Intermediate Similarity NPD7874 Approved
0.7348 Intermediate Similarity NPD7286 Phase 2
0.7337 Intermediate Similarity NPD6143 Clinical (unspecified phase)
0.7333 Intermediate Similarity NPD5406 Approved
0.7333 Intermediate Similarity NPD5408 Approved
0.7333 Intermediate Similarity NPD5405 Approved
0.7333 Intermediate Similarity NPD5404 Approved
0.733 Intermediate Similarity NPD7699 Phase 2
0.733 Intermediate Similarity NPD7700 Phase 2
0.7329 Intermediate Similarity NPD2313 Discontinued
0.7326 Intermediate Similarity NPD7458 Discontinued
0.7323 Intermediate Similarity NPD7801 Approved
0.7322 Intermediate Similarity NPD7240 Approved
0.7321 Intermediate Similarity NPD6190 Approved
0.7306 Intermediate Similarity NPD2494 Approved
0.7306 Intermediate Similarity NPD2493 Approved
0.7301 Intermediate Similarity NPD5124 Phase 1
0.7301 Intermediate Similarity NPD1933 Approved
0.7301 Intermediate Similarity NPD5123 Clinical (unspecified phase)
0.7289 Intermediate Similarity NPD2344 Approved
0.7273 Intermediate Similarity NPD7033 Discontinued
0.7263 Intermediate Similarity NPD7229 Phase 3
0.7262 Intermediate Similarity NPD1878 Clinical (unspecified phase)
0.725 Intermediate Similarity NPD9494 Approved
0.7239 Intermediate Similarity NPD4060 Phase 1
0.7222 Intermediate Similarity NPD6410 Clinical (unspecified phase)
0.7216 Intermediate Similarity NPD3452 Approved
0.7216 Intermediate Similarity NPD3450 Approved
0.7215 Intermediate Similarity NPD4749 Approved
0.7215 Intermediate Similarity NPD4379 Clinical (unspecified phase)
0.7207 Intermediate Similarity NPD8127 Discontinued
0.7202 Intermediate Similarity NPD8285 Discontinued
0.7198 Intermediate Similarity NPD7177 Discontinued
0.7197 Intermediate Similarity NPD1201 Approved
0.7197 Intermediate Similarity NPD1547 Clinical (unspecified phase)
0.7197 Intermediate Similarity NPD1610 Phase 2
0.7194 Intermediate Similarity NPD4583 Approved
0.7194 Intermediate Similarity NPD4582 Approved
0.7194 Intermediate Similarity NPD8319 Approved
0.7194 Intermediate Similarity NPD8320 Phase 1
0.7171 Intermediate Similarity NPD7907 Approved
0.7169 Intermediate Similarity NPD4308 Phase 3
0.716 Intermediate Similarity NPD7003 Approved
0.7159 Intermediate Similarity NPD8455 Phase 2
0.7157 Intermediate Similarity NPD4665 Approved
0.7157 Intermediate Similarity NPD4111 Phase 1
0.7151 Intermediate Similarity NPD6273 Approved
0.7143 Intermediate Similarity NPD4002 Approved
0.7143 Intermediate Similarity NPD7615 Clinical (unspecified phase)
0.7143 Intermediate Similarity NPD4004 Approved
0.7143 Intermediate Similarity NPD2424 Discontinued
0.7135 Intermediate Similarity NPD4361 Phase 2

Structure

External Identifiers

PubChem CID   164215
ChEMBL   CHEMBL229222
ZINC  

Physicochemical Properties

Molecular Weight:  422.17
ALogP:  0.9708
MLogP:  3.55
XLogP:  2.804
# Rotatable Bonds:  10
Polar Surface Area:  96.22
# H-Bond Aceptor:  1
# H-Bond Donor:  3
# Rings:  4
# Heavy Atoms:  31

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs