Organism Name: Gardenia tubifera

Organism ID:   NPO7016
Organism Name:   Gardenia tubifera
Native / Engineered Organism:   Native Organism
Matched Taxonomy Level:   Species
Organism External ID:   NCBI_Taxonomy_ID[ 1240870]
Organism Synonyms:  
Genus:   Gardenia
Family:   Rubiaceae
Kingdom:   Viridiplantae
SuperKingdom:   Eukaryota

  Individual Natural Products

Natural Product ID Prefer Name (or InChiKey) IUPAC Name Number of Targets Number of Activity Records
NPC270180 SEWGEBLLCBZABI-UZAFNIHYSA-N n.a. 0 0
NPC119620 FOWPKLFOIDTRMY-YXPGJMBHSA-N n.a. 0 0
NPC119949 Elemicin 4-methoxy-6-prop-2-enyl-1,3-benzodioxole 19 20
NPC119092 NPLTVGMLNDMOQE-LLVKDONJSA-N n.a. 0 0
NPC152384 Benzyl Beta-D-Glucopyranoside (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-phenylmethoxyoxane-3,4,5-triol 6 10
NPC209431 (4S)-4-Prop-1-En-2-Ylcyclohexene-1-Carbaldehyde (4S)-4-prop-1-en-2-ylcyclohexene-1-carbaldehyde 2 7
NPC210457 GMYHXOPIKMGWOM-MGCOHNPYSA-N n.a. 0 0
NPC150950 Thiamine 2-[3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-4-methyl-1,3-thiazol-3-ium-5-yl]ethanol 15 43
NPC118726 6,7,3',4'-Tetrahydroxyflavone 2-(3,4-dihydroxyphenyl)-6,7-dihydroxychromen-4-one 1 1
NPC158059 Pomolic Acid (1R,2R,4aS,6aR,6aS,6bR,8aR,10S,12aR,14bS)-1,10-dihydroxy-1,2,6a,6b,9,9,12a-heptamethyl-2,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylic acid 63 77
NPC50898 Apigenin 5,7-dihydroxy-2-(4-hydroxyphenyl)chromen-4-one 399 1052
NPC137949 Esculetin 6,7-dihydroxychromen-2-one 129 201
NPC214691 YMBFCQPIMVLNIU-KKUMJFAQSA-N n.a. 0 0
NPC252997 OSDXSOSJRPQCHJ-OPQSBORISA-N n.a. 0 0
NPC84721 5-Methoxyfuro[2,3-G][3]Benzoxepin 2-(5-methoxyfuro[3,2-i][3]benzoxepin-2-yl)propan-2-ol 1 1
NPC76315 HRYIDVZLDQBLFF-JEFOHARNSA-N n.a. 0 0
NPC142415 Oleanolic_Acid (4aS,6aR,6aS,6bR,8aR,10S,12aR,14bS)-10-hydroxy-2,2,6a,6b,9,9,12a-heptamethyl-1,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylic acid 174 689
NPC190810 (-)-Limonene (4S)-1-methyl-4-prop-1-en-2-ylcyclohexene 3 8
NPC45536 Perillaketone 1-(furan-3-yl)-4-methylpentan-1-one 59 61
NPC68889 Linalool (+) (3R)-3,7-dimethylocta-1,6-dien-3-ol 5 6
NPC14568 QLCNJZHWGARWON-GWBCVVOASA-N n.a. 0 0
NPC235053 Hyptasienic Acid (3aS,5aR,5bS,7aS,10R,11R,11aS,13aS,13bS)-11-hydroxy-1-(hydroxymethyl)-3,3,5a,5b,10,11,13b-heptamethyl-4,5,6,7,8,9,10,11a,13,13a-decahydro-3aH-cyclopenta[a]chrysene-7a-carboxylic acid 5 5
NPC204120 5'-Metoxy Eugenol 1,2,3-trimethoxy-5-prop-2-enylbenzene 6 6
NPC311348 QOPSZFXPZWQLOG-TVKJYDDYSA-N n.a. 0 0
NPC84030 Racementhol (1S,2R,5S)-5-methyl-2-propan-2-ylcyclohexan-1-ol 1 1
NPC195667 RJBGVAIXGHZIDY-UHFFFAOYSA-N n.a. 0 0
NPC232083 HCZDGTUAMVKZNE-JPBGGQQDSA-O n.a. 0 0
NPC51700 Ursolic Acid (1S,2R,4aS,6aR,6aS,6bR,8aR,10S,12aR,14bS)-10-hydroxy-1,2,6a,6b,9,9,12a-heptamethyl-2,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydro-1H-picene-4a-carboxylic acid 175 680
NPC280945 Cyanin (2S,3R,4S,5S,6R)-2-[2-(3,4-dihydroxyphenyl)-7-hydroxy-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromenylium-5-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol 1 4
NPC56014 SJFTVAAHLRFBST-DBFWEQBMSA-N n.a. 0 0
NPC54925 Trilinolein 2,3-bis[[(9Z,12Z)-octadeca-9,12-dienoyl]oxy]propyl (9Z,12Z)-octadeca-9,12-dienoate 1 1
NPC165991 SJFTVAAHLRFBST-NSHQGHFVSA-N n.a. 0 0
NPC201384 JWLMVCZLDCVNAM-HFVZKWEFSA-N n.a. 0 0
NPC243728 Daucosterol (2R,3R,4S,5S,6R)-2-[[(3S,8S,9S,10R,13R,14S,17R)-17-[(2R,5R)-5-ethyl-6-methylheptan-2-yl]-10,13-dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]-6-(hydroxymethyl)oxane-3,4,5-triol 37 69
NPC312454 XWFVDCOWPBJQFH-UHFFFAOYSA-N n.a. 0 0
NPC227632 (+)-Beta-Pinene (1R,5R)-6,6-dimethyl-4-methylidenebicyclo[3.1.1]heptane 6 6
NPC109813 Beta-Caryophyllene (1R,4E,9S)-4,11,11-trimethyl-8-methylidenebicyclo[7.2.0]undec-4-ene 17 51
NPC18205 Citral (2E)-3,7-dimethylocta-2,6-dienal 12 26
NPC178890 GJZJZRWFRZFTEE-WSWXFMRZSA-N n.a. 0 0
NPC30621 YUTAFQVKXLDYFG-YTQIUSBHSA-N n.a. 0 0
NPC36530 UZRUFOMXLWRIQS-MRVPVSSYSA-N n.a. 0 0
NPC194937 Gardenoin D n.a. 4 5
NPC155500 XHALVRQBZGZHFE-PFWMLDTASA-N n.a. 0 0
NPC275407 FLXYFXDZJHWWGW-VJQRDGCPSA-N n.a. 0 0
NPC3824 XNGKCOFXDHYSGR-UHFFFAOYSA-N n.a. 0 0
NPC113733 Stigmasterol (3S,8S,9S,10R,13R,14S,17R)-17-[(E,2R,5S)-5-ethyl-6-methylhept-3-en-2-yl]-10,13-dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-ol 37 91
NPC304309 (3S,8S,9S,10R,13R,14S,17R)-17-[(2R,5S)-5,6-Dimethylheptan-2-Yl]-10,13-Dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-Dodecahydro-1H-Cyclopenta[A]Phenanthren-3-Ol (3S,8S,9S,10R,13R,14S,17R)-17-[(2R,5S)-5,6-dimethylheptan-2-yl]-10,13-dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-ol 2 9
NPC128988 PBBVWJQPAZYQDB-DBFWEQBMSA-N n.a. 0 0
NPC120217 Prunasin (2R)-2-phenyl-2-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyacetonitrile 2 2
NPC61 Rosmarinic Acid (2R)-3-(3,4-dihydroxyphenyl)-2-[(E)-3-(3,4-dihydroxyphenyl)prop-2-enoyl]oxypropanoic acid 80 273
NPC241784 (1S,5S)-4,6,6-Trimethylbicyclo[3.1.1]Hept-3-Ene (1S,5S)-4,6,6-trimethylbicyclo[3.1.1]hept-3-ene 3 10
NPC32365 GAQXTAWZNDSRDE-BAXHPOPBSA-N n.a. 0 0
NPC200209 YPXWWSJGANMFFQ-AQAMAIGXSA-O n.a. 0 0
NPC189248 Magnosalin 1-[(1R,2R,3R,4R)-2,3-dimethyl-4-(2,4,5-trimethoxyphenyl)cyclobutyl]-2,4,5-trimethoxybenzene 9 10
NPC12319 3,7-Dimethylocta-2,6-Dienal 3,7-dimethylocta-2,6-dienal 4 34
NPC68098 JFDNMLUPLXZXGV-RKAGECJXSA-N n.a. 0 0
NPC230301 Beta-Sitosterol (3S,8S,9S,10R,13R,14S,17R)-17-[(2R,5R)-5-ethyl-6-methylheptan-2-yl]-10,13-dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-ol 107 201
NPC183950 Chrysoeriol 5,7-dihydroxy-2-(4-hydroxy-3-methoxyphenyl)chromen-4-one 55 144
NPC116140 YGHHWSRCTPQFFC-YSCNKMLASA-N n.a. 0 0
NPC43211 Scutellarin (2S,3S,4S,5R,6S)-6-[5,6-dihydroxy-2-(4-hydroxyphenyl)-4-oxochromen-7-yl]oxy-3,4,5-trihydroxyoxane-2-carboxylic acid 31 97
NPC301610 OHEWWNXUFJOVOD-YMIJDRNOSA-N n.a. 0 0
NPC184105 MONAHUOUARCHLM-RMPHEQRESA-N n.a. 0 0
NPC71074 Corosolic Acid (1S,2R,4aS,6aR,6aS,6bR,8aR,10R,11R,12aR,14bS)-10,11-dihydroxy-1,2,6a,6b,9,9,12a-heptamethyl-2,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydro-1H-picene-4a-carboxylic acid 58 136
NPC202904 1-[(1R,2S,3S,4R)-2,3-Dimethyl-4-(2,4,5-Trimethoxyphenyl)Cyclobutyl]-2,4,5-Trimethoxybenzene 1-[(1R,2S,3S,4R)-2,3-dimethyl-4-(2,4,5-trimethoxyphenyl)cyclobutyl]-2,4,5-trimethoxybenzene 2 3
NPC274179 XEYCZVQIOJGCNL-UHFFFAOYSA-N n.a. 0 0
NPC278102 Protocatechualdehyde 3,4-dihydroxybenzaldehyde 33 87
NPC311517 XVCVDNKCUNGTRP-GQCTYLIASA-N n.a. 0 0
NPC20505 Luteolin-7-O-Glucuronic Acid (2S,3S,4S,5R,6S)-6-[2-(3,4-dihydroxyphenyl)-5-hydroxy-4-oxochromen-7-yl]oxy-3,4,5-trihydroxyoxane-2-carboxylic acid 2 2
NPC47646 CDSQRAACZGXZNE-YPDLZZPGSA-N n.a. 0 0
NPC173696 ZKSZEJFBGODIJW-YOVYLDAJSA-N n.a. 0 0
NPC216746 DSMWJDJWYGMEBO-IWDMAWHXSA-N n.a. 0 0
NPC76145 Limonene (4R)-1-methyl-4-prop-1-en-2-ylcyclohexene 43 225
NPC83638 YYYCJNDALLBNEG-GNRUMFBNSA-N n.a. 0 0
NPC52021 3-Epimaslinic Acid (4aS,6aR,6aS,6bR,8aR,10S,11R,12aR,14bS)-10,11-dihydroxy-2,2,6a,6b,9,9,12a-heptamethyl-1,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylic acid 12 18
NPC93666 Gardenoin A n.a. 4 5
NPC124774 NDRLBVWGLKJENX-OTOOEMNYSA-O n.a. 0 0
NPC78500 Benzaldehyde benzaldehyde 26 62
NPC259733 Tomentic Acid (1R,2R,4aS,6aR,6aS,6bR,8aR,10R,11R,12aR,14bS)-1,10,11-trihydroxy-1,2,6a,6b,9,9,12a-heptamethyl-2,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylic acid 18 29
NPC45270 Menthone (2S,5R)-5-methyl-2-propan-2-ylcyclohexan-1-one 4 20
NPC141777 (-)-Camphene (1R,4S)-3,3-dimethyl-2-methylidenebicyclo[2.2.1]heptane 7 9
NPC70432 CGYLWHVYZDSTDR-ZJUUUORDSA-N n.a. 0 0
NPC11089 Perilloxin 2-[(2R)-5-methoxy-2,3-dihydrofuro[3,2-i][3]benzoxepin-2-yl]propan-2-ol 1 1
NPC46274 Cyanidin 2-(3,4-dihydroxyphenyl)chromenylium-3,5,7-triol 13 39
NPC68409 VADSVXSGIFBZLI-DGADGQDISA-N n.a. 0 0
NPC226374 IBLZNWWZRXJQAK-DBFWEQBMSA-N n.a. 0 0
NPC257124 Eugenol 2-methoxy-4-prop-2-enylphenol 98 251
NPC34679 SSVXLIRLGPMWSL-LHHGAGPPSA-N n.a. 0 0
NPC189142 Galuteolin 2-(3,4-dihydroxyphenyl)-5-hydroxy-7-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-4-one 63 121
NPC158654 Methyl Protocatechuate methyl 3,4-dihydroxybenzoate 19 37
NPC270849 Citrusin C (2R,3S,4S,5R,6S)-2-(hydroxymethyl)-6-(2-methoxy-4-prop-2-enylphenoxy)oxane-3,4,5-triol 4 5
NPC60339 HGNBCZFZBKBJMT-SBLNNXNXSA-N n.a. 0 0
NPC300351 Pygenic Acid A (1S,2R,4aS,6aR,6aS,6bR,8aR,10S,11R,12aR,14bS)-10,11-dihydroxy-1,2,6a,6b,9,9,12a-heptamethyl-2,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydro-1H-picene-4a-carboxylic acid 4 4
NPC76510 GETJVNWBYXAIFC-JPBGGQQDSA-O n.a. 0 0
NPC88566 P-Cymene 1-methyl-4-propan-2-ylbenzene 12 33
NPC176309 Levomenthol (1R,2S,5R)-5-methyl-2-propan-2-ylcyclohexan-1-ol 15 46
NPC157193 Methyl Alpha-D-Galactoside (2R,3R,4S,5R,6S)-2-(hydroxymethyl)-6-methoxyoxane-3,4,5-triol 9 9
NPC306541 Augustic Acid (4aS,6aR,6aS,6bR,8aR,10R,11S,12aR,14bS)-10,11-dihydroxy-2,2,6a,6b,9,9,12a-heptamethyl-1,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylic acid 7 13
NPC226250 Methylcaffeate methyl (E)-3-(3,4-dihydroxyphenyl)prop-2-enoate 35 62
NPC304873 4-Isopropylbenzoic Acid 4-propan-2-ylbenzoic acid 2 4
NPC95031 RUMOYJJNUMEFDD-JTQLQIEISA-N n.a. 0 0
NPC87854 SNEUKIVZGFXMHQ-QMMMGPOBSA-N n.a. 0 0
NPC226538 YWFKRPGNXQGHPZ-NTYSQWBRSA-N n.a. 0 0
NPC150610 GFZFUVWXGQWUGX-DGEKEWMVSA-N n.a. 1 1
NPC102738 MONAHUOUARCHLM-QORBILMTSA-N n.a. 0 0
NPC294902 Caffeic Acid (E)-3-(3,4-dihydroxyphenyl)prop-2-enoic acid 219 596
NPC130209 [(4R)-4-Prop-1-En-2-Ylcyclohexen-1-Yl]Methanol [(4R)-4-prop-1-en-2-ylcyclohexen-1-yl]methanol 6 6
NPC46248 1-Octen-3-Ol (3R)-oct-1-en-3-ol 7 38
NPC283170 Dillapiole 4,5-dimethoxy-6-prop-2-enyl-1,3-benzodioxole 2 2
NPC294548 Linolenic Acid (9Z,12Z,15Z)-octadeca-9,12,15-trienoic acid 78 247
NPC197545 CDSQRAACZGXZNE-MMNFBHMQSA-N n.a. 0 0
NPC151620 FAMPSKZZVDUYOS-KXWHQPPKSA-N n.a. 0 0
NPC56731 Gardenoin B n.a. 4 5
NPC140688 Isoegomaketone (E)-1-(furan-3-yl)-4-methylpent-2-en-1-one 1 66
NPC117707 LIEMWVYKRWIQMX-IBEHDNSVSA-N n.a. 0 0
NPC18074 (-)-Rosmarinic Acid (2S)-3-(3,4-dihydroxyphenyl)-2-[(E)-3-(3,4-dihydroxyphenyl)prop-2-enoyl]oxypropanoic acid 1 1
NPC292559 SLKPBCXNFNIJSV-HNNXBMFYSA-N n.a. 0 0
NPC81035 MBMFVVJRZMJLSK-YMIJDRNOSA-N n.a. 0 0
NPC162742 Campesterol (3S,8S,9S,10R,13R,14S,17R)-17-[(2R,5R)-5,6-dimethylheptan-2-yl]-10,13-dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-ol 1 2
NPC128543 YUTAFQVKXLDYFG-RCZWDNKTSA-N n.a. 0 0
NPC279121 Luteolin 2-(3,4-dihydroxyphenyl)-5,7-dihydroxychromen-4-one 269 872
NPC7654 VPWIBNQGHJUEJI-XDMCCRGWSA-O n.a. 0 0
NPC239117 VQDVPEBDINWLHZ-SXFAUFNYSA-N n.a. 0 0
NPC84349 Gardenoin C n.a. 4 5
NPC204243 PBBVWJQPAZYQDB-NSHQGHFVSA-N n.a. 0 0
NPC286212 YONLJLRPNAUKHY-UZAFNIHYSA-N n.a. 0 0
NPC260727 TUDSCAUWKFENRC-GUFWIUQMSA-N n.a. 0 0
NPC210003 Apigetrin 5-hydroxy-2-(4-hydroxyphenyl)-7-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-4-one 95 124
NPC112701 Vicenin-2 5,7-dihydroxy-2-(4-hydroxyphenyl)-6,8-bis[(2S,3R,4R,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]chromen-4-one 11 20

  NPs produced by Co-culture Organisms (for Co-culture organisms, the full organism list can be found HERE)

Organism Name Producer Organism Inducer Organism NP ID NP Name Effect of Co-culture Reference

  NPs produced by Engineered Organisms (for Engineered organisms, the full organism list can be found HERE)

Organism Name Parent Organism Name Engineered Gene in Organism Purpose of Engineering Engineering Category Engineering Description NP ID NP Name NP Yeild of Parent Organism NP Yeild of Engineered Organism Yeild Change Reference

  The Quantitative Compositions of NPs in Organism

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference