NPASS Compound

Natural Product: NPC195114

Natural Product ID	NPC195114
Common Name ? The InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.	Galloyloxypaeoniflorin
IUPAC Name	n.a.
Synonyms	Galloyloxypaeoniflorin
Synthetic Gene Cluster	n.a.
ChEMBL Identifier	CHEMBL2205289
PubChem CID	71455849
Chemical Classification	CHEMONTID:0000000 [Organic compounds] [CHEMONTID:0000012] Lipids and lipid-like molecules [CHEMONTID:0000259] Prenol lipids [CHEMONTID:0002049] Terpene glycosides

The Chemical Classification was calculated by Classyfire, a software for chemical taxonomy calculation. Reference: DOI:10.1186/s13321-016-0174-y.

Chemical Representations

RDKit 3D 78 84 0 0 0 0 0 0 0 0999 V2000 -1.4566 -4.8854 -0.3317 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.3817 -4.0343 -1.1441 C 0 0 2 0 0 0 0 0 0 0 0 0 -2.7519 -4.5750 -2.4699 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.6956 -3.5389 -3.0737 C 0 0 2 0 0 0 0 0 0 0 0 0 -3.0349 -2.2286 -2.9369 C 0 0 2 0 0 0 0 0 0 0 0 0 -1.5589 -2.3012 -2.6658 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.8654 -2.5640 -1.2081 C 0 0 1 0 0 0 0 0 0 0 0 0 -3.1857 -1.8925 -1.4238 C 0 0 1 0 0 0 0 0 0 0 0 0 -3.3231 -0.4323 -1.2487 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.4741 0.2233 -0.0991 O 0 0 0 0 0 0 0 0 0 0 0 0 -4.3799 0.3291 0.8913 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.4268 -0.3499 0.8012 O 0 0 0 0 0 0 0 0 0 0 0 0 -4.2220 1.1947 2.0791 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.1646 1.2148 3.0798 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.9876 2.0572 4.1770 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.8894 2.8820 4.2996 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.9486 2.8558 3.2908 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.1277 2.0185 2.2032 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.7144 3.7209 5.3942 O 0 0 0 0 0 0 0 0 0 0 0 0 -4.2503 -2.8387 -1.0521 C 0 0 2 0 0 0 0 0 0 0 0 0 -3.5454 -3.8569 -0.3971 O 0 0 0 0 0 0 0 0 0 0 0 0 -4.7801 -3.4297 -2.2208 O 0 0 0 0 0 0 0 0 0 0 0 0 -1.0359 -2.2465 -0.2884 O 0 0 0 0 0 0 0 0 0 0 0 0 -0.3418 -1.2712 0.1658 C 0 0 1 0 0 0 0 0 0 0 0 0 -0.3848 -0.9831 1.6639 C 0 0 1 0 0 0 0 0 0 0 0 0 0.3381 0.3166 1.9534 C 0 0 2 0 0 0 0 0 0 0 0 0 1.7657 0.2078 1.4589 C 0 0 1 0 0 0 0 0 0 0 0 0 1.6702 -0.1474 -0.0325 C 0 0 1 0 0 0 0 0 0 0 0 0 3.1319 -0.3257 -0.4632 C 0 0 0 0 0 0 0 0 0 0 0 0 3.8155 0.9091 -0.4254 O 0 0 0 0 0 0 0 0 0 0 0 0 5.1583 0.9152 -0.7748 C 0 0 0 0 0 0 0 0 0 0 0 0 5.7179 -0.1665 -1.1097 O 0 0 0 0 0 0 0 0 0 0 0 0 5.9577 2.1328 -0.7701 C 0 0 0 0 0 0 0 0 0 0 0 0 7.2861 2.1217 -1.1036 C 0 0 0 0 0 0 0 0 0 0 0 0 8.0216 3.2988 -1.0923 C 0 0 0 0 0 0 0 0 0 0 0 0 7.4575 4.5033 -0.7524 C 0 0 0 0 0 0 0 0 0 0 0 0 6.1204 4.5190 -0.4161 C 0 0 0 0 0 0 0 0 0 0 0 0 5.3882 3.3469 -0.4272 C 0 0 0 0 0 0 0 0 0 0 0 0 5.4866 5.6899 -0.0649 O 0 0 0 0 0 0 0 0 0 0 0 0 8.1876 5.6915 -0.7378 O 0 0 0 0 0 0 0 0 0 0 0 0 9.3525 3.2602 -1.4310 O 0 0 0 0 0 0 0 0 0 0 0 0 1.0726 -1.3847 -0.0965 O 0 0 0 0 0 0 0 0 0 0 0 0 2.4814 1.3498 1.6807 O 0 0 0 0 0 0 0 0 0 0 0 0 0.4046 0.4309 3.3474 O 0 0 0 0 0 0 0 0 0 0 0 0 -1.6725 -0.8508 2.1342 O 0 0 0 0 0 0 0 0 0 0 0 0 -4.0724 -3.8703 -4.3577 O 0 0 0 0 0 0 0 0 0 0 0 0 -1.8391 -5.9139 -0.3671 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.5608 -4.5499 0.7355 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.4163 -4.8861 -0.6645 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.9457 -4.8782 -3.1316 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.3828 -5.4886 -2.2959 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.3880 -1.4075 -3.5800 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.9900 -3.0825 -3.1889 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.1210 -1.3147 -2.8879 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.1249 -0.1497 -2.0366 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.4042 0.0155 -1.7786 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.0448 0.5911 3.0390 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.7105 2.0966 4.9802 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.0887 3.5104 3.3992 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.3717 2.0307 1.4324 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.6880 4.7408 5.2550 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.0853 -2.5083 -0.4574 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.5476 -0.3080 -0.3396 H 0 0 0 0 0 0 0 0 0 0 0 0 0.1985 -1.7526 2.2255 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.1582 1.2066 1.5717 H 0 0 0 0 0 0 0 0 0 0 0 0 2.2233 -0.6910 1.9316 H 0 0 0 0 0 0 0 0 0 0 0 0 1.1539 0.6138 -0.6174 H 0 0 0 0 0 0 0 0 0 0 0 0 3.5863 -0.9824 0.3074 H 0 0 0 0 0 0 0 0 0 0 0 0 3.1899 -0.8070 -1.4594 H 0 0 0 0 0 0 0 0 0 0 0 0 7.7321 1.1849 -1.3697 H 0 0 0 0 0 0 0 0 0 0 0 0 4.3321 3.3251 -0.1675 H 0 0 0 0 0 0 0 0 0 0 0 0 5.6318 6.1258 0.8371 H 0 0 0 0 0 0 0 0 0 0 0 0 7.6782 6.5486 -0.8843 H 0 0 0 0 0 0 0 0 0 0 0 0 9.7133 3.3104 -2.3617 H 0 0 0 0 0 0 0 0 0 0 0 0 2.0892 1.9887 2.2963 H 0 0 0 0 0 0 0 0 0 0 0 0 0.1978 -0.4218 3.7977 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.7177 -1.1409 3.0992 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.2836 -4.0220 -4.9169 H 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 1 2 3 1 0 3 4 1 0 4 5 1 0 5 6 1 0 6 7 1 0 7 8 1 0 8 9 1 6 9 10 1 0 10 11 1 0 11 12 2 0 11 13 1 0 13 14 2 0 14 15 1 0 15 16 2 0 16 17 1 0 17 18 2 0 16 19 1 0 8 20 1 0 20 21 1 0 20 22 1 0 7 23 1 1 23 24 1 0 24 25 1 0 25 26 1 0 26 27 1 0 27 28 1 0 28 29 1 0 29 30 1 0 30 31 1 0 31 32 2 0 31 33 1 0 33 34 2 0 34 35 1 0 35 36 2 0 36 37 1 0 37 38 2 0 37 39 1 0 36 40 1 0 35 41 1 0 28 42 1 0 27 43 1 0 26 44 1 0 25 45 1 0 4 46 1 6 7 2 1 0 18 13 1 0 42 24 1 0 21 2 1 0 38 33 1 0 22 4 1 0 8 5 1 0 1 47 1 0 1 48 1 0 1 49 1 0 3 50 1 0 3 51 1 0 5 52 1 6 6 53 1 0 6 54 1 0 9 55 1 0 9 56 1 0 14 57 1 0 15 58 1 0 17 59 1 0 18 60 1 0 19 61 1 0 20 62 1 1 24 63 1 6 25 64 1 1 26 65 1 6 27 66 1 1 28 67 1 6 29 68 1 0 29 69 1 0 34 70 1 0 38 71 1 0 39 72 1 0 40 73 1 0 41 74 1 0 43 75 1 0 44 76 1 0 45 77 1 0 46 78 1 0 M END

Standard InCHIKey	UXLQQSZFSBGUNY-QHOIGUMUSA-N
Standard InCHI	InChI=1S/C30H32O16/c1-27-10-29(40)18-8-30(27,28(18,26(45-27)46-29)11-42-23(38)12-2-4-14(31)5-3-12)44-25-22(37)21(36)20(35)17(43-25)9-41-24(39)13-6-15(32)19(34)16(33)7-13/h2-7,17-18,20-22,25-26,31-37,40H,8-11H2,1H3/t17-,18-,20-,21+,22-,25+,26-,27+,28+,29-,30+/m1/s1
SMILES	C[C@]12C[C@@]3([C@@H]4C[C@]1([C@]4(COC(=O)c1ccc(cc1)O)[C@H](O2)O3)O[C@H]1[C@@H]([C@H]([C@@H]([C@@H](COC(=O)c2cc(c(c(c2)O)O)O)O1)O)O)O)O

Calculated Properties

Physi-Chem Properties

Molecular Weight:	648.17	Volume:	587.093 ? Van der Waals volume.
Dense:	1.104	LogP:	1.327 ? The logarithm of the n-octanol/water distribution coefficients.
logD7.4:	1.695 ? The logarithm of the n-octanol/water distribution coefficient at pH=7.4.	LogS:	-3.361 ? The logarithm of aqueous solubility value.
Rotatable Bonds:	10.0	Rigid Bonds:	33.0
TPSA:	251.36 ? Topological Polar Surface Area.	H-Bond Acceptor:	16.0
H-Bond Donor:	8.0	Rings:	9.0
Heavy Atoms:	16.0

MedChem Properties

QED Drug-Likeness Score:	0.13	GASA:	1.0 ? GASA represents the probability of being difficult to synthesize, ranging from 0 to 1.
Synthetic Accessibility Score:	6.436	Fsp³:	0.533
MCE-18:	171.13 ? MCE-18 stands for medicinal chemistry evolution.MCE-18≥45 is considered a suitable value.	Lipinski Rule-of-5:	Accepted
Pfizer Rule:	Rejected	GSK Rule:	Accepted
Golden Triangle Rule:	Accepted	BMS Rule:	0
Chelating Alert:	1	PAINS Alert:	1
Colloidal aggregators:	0.624	Fluc inhibitor:	0.233 ? The fluc inhibitor value is the probability of being fLuc inhibitors, within the range of 0 to 1.
Blue fluorescence:	0.064 ? The blue fluorescence value is the probability of being blue fluorescence, within the range of 0 to 1	Green fluorescence:	0.295 ? The green fluorescence value is the probability of being green fluorescence, within the range of 0 to 1
Reactive compounds:	0.096	Promiscuous compounds:	0.305

ADMET Properties (ADMETlab3.0)

ADMET: Absorption

Caco-2 Permeability:	-6.356	MDCK Permeability:	-5.21
Pgp-inhibitor:	0.0	Pgp-substrate:	0.032
PAMPA:	0.994 ? The experimental data for Peff was logarithmically transformed (logPeff). Molecules with log Peff values below 2.0 were classified as low-permeability (Category 0), while those with log Peff values exceeding 2.5 were classified as high-permeability (Category 1).	Human Intestinal Absorption (HIA):	0.001
20% Bioavailability (F20%):	0.96	30% Bioavailability (F30%):	0.992
50% Bioavailability (F50%):	1.0

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):	0.0	MRP1:	0.989
Plasma Protein Binding (PPB):	79.029%	Volume Distribution (VD):	-0.35
Fu:	23.288% ? The fraction unbound in plasms.	OATP1B1 inhibitor:	0.999
OATP1B3 inhibitor:	0.999	BCRP inhibitor:	0.679
BSEP inhibitor:	0.174

ADMET: Metabolism

CYP1A2-inhibitor:	0.0	CYP1A2-substrate:	0.0
CYP2C19-inhibitor:	0.0	CYP2C19-substrate:	0.002
CYP2C9-inhibitor:	0.0	CYP2C9-substrate:	0.0
CYP2D6-inhibitor:	0.0	CYP2D6-substrate:	0.183
CYP3A4-inhibitor:	0.0	CYP3A4-substrate:	0.983
CYP2B6-substrate:	0.0	CYP2C8-inhibitor:	0.949
HLM stability:	0.423 ? Human liver microsomal (HLM) stability. Category 0: stable+ (HLM > 30 min); Category 1: unstable- (HLM ≤ 30 min). The output value is the probability of human liver microsomal instability, where a value closer to 1 indicates a higher likelihood of instability.

ADMET: Excretion

Clearance (CL):

2.6

Half-life (T1/2):

4.442

ADMET: Toxicity

hERG Blockers:	0.055	hERG Blockers (10um):	0.799
Human Hepatotoxicity (H-HT):	0.073	Drug-induced Liver Injury (DILI):	0.35
AMES Toxicity:	0.866	Rat Oral Acute Toxicity:	0.022
Maximum Recommended Daily Dose:	0.381	Skin Sensitization:	1.0
Carcinogencity:	0.189	Eye Corrosion:	0.0
Eye Irritation:	0.14	Respiratory Toxicity:	0.041
Drug-induced Neurotoxicity:	0.001	Ototoxicity:	0.989
Hematotoxicity:	0.006	Drug-induced Nephrotoxicity:	0.03
Genotoxicity:	0.636	RPMI-8226 Immunitoxicity:	0.024
A549 Cytotoxicity:	0.953	Hek293 Cytotoxicity:	0.695
BCF:	0.517 ? Bioconcentration factors are used for considering secondary poisoning potential and assessing risks to human health via the food chain. The unit is -log10[(mg/L)/(1000*MW)].	IGC50:	3.691 ? 48 hour Tetrahymena pyriformis IGC50. The unit of IGC50 is -log10[(mg/L)/(1000*MW)].
LC50DM:	5.237 ? 48 hour Daphnia magna LC50. The unit of LC50DM is -log10[(mg/L)/(1000*MW)].	LC50FM:	4.592 ? 96 hour fathead minnow LC50. The unit of LC50FM is -log10[(mg/L)/(1000*MW)].

Species Source

Organism ID	Organism Name	Taxonomy Level	Family	SuperKingdom	Isolation Part	Collection Location	Collection Time	Reference
NPO9798	Paeonia lactiflora	Species	Paeoniaceae	Eukaryota	Seeds	Anhui province, China		DOI[10.1016/j.foodres.2020.109416]
NPO9798	Paeonia lactiflora	Species	Paeoniaceae	Eukaryota	Seeds	Gansu province, China		DOI[10.1016/j.foodres.2020.109416]
NPO9798	Paeonia lactiflora	Species	Paeoniaceae	Eukaryota	Seeds	Henan province, China		DOI[10.1016/j.foodres.2020.109416]
NPO9798	Paeonia lactiflora	Species	Paeoniaceae	Eukaryota	Seeds	Shandong province, China		DOI[10.1016/j.foodres.2020.109416]
NPO9798	Paeonia lactiflora	Species	Paeoniaceae	Eukaryota	Seeds	Shanxi province, China		DOI[10.1016/j.foodres.2020.109416]
NPO9798	Paeonia lactiflora	Species	Paeoniaceae	Eukaryota	n.a.	root	n.a.	DOI[10.2174/092986712800229032]
NPO22550	Paeonia suffruticosa	Species	Paeoniaceae	Eukaryota	n.a.	n.a.	n.a.	PMID[11339628]
NPO22550	Paeonia suffruticosa	Species	Paeoniaceae	Eukaryota	n.a.	bark	n.a.	PMID[17260795]
NPO9798	Paeonia lactiflora	Species	Paeoniaceae	Eukaryota	n.a.	n.a.	n.a.	PMID[19402674]
NPO22550	Paeonia suffruticosa	Species	Paeoniaceae	Eukaryota	n.a.	Daejeon, Korea	2007-Jan	PMID[19670875]
NPO9798	Paeonia lactiflora	Species	Paeoniaceae	Eukaryota	n.a.	root	n.a.	PMID[19721258]
NPO9798	Paeonia lactiflora	Species	Paeoniaceae	Eukaryota	n.a.	root	n.a.	PMID[19772486]
NPO9798	Paeonia lactiflora	Species	Paeoniaceae	Eukaryota	Roots	n.a.	n.a.	PMID[20806783]
NPO22550	Paeonia suffruticosa	Species	Paeoniaceae	Eukaryota	n.a.	seed	n.a.	PMID[20822014]
NPO9798	Paeonia lactiflora	Species	Paeoniaceae	Eukaryota	n.a.	root	n.a.	PMID[21782011]
NPO9798	Paeonia lactiflora	Species	Paeoniaceae	Eukaryota	n.a.	root	n.a.	PMID[22190295]
NPO22550	Paeonia suffruticosa	Species	Paeoniaceae	Eukaryota	n.a.	root	n.a.	PMID[22547314]
NPO9798	Paeonia lactiflora	Species	Paeoniaceae	Eukaryota	n.a.	seed	n.a.	PMID[23497864]
NPO22550	Paeonia suffruticosa	Species	Paeoniaceae	Eukaryota	root bark	Bozhou, Anhui Province, China	2010-AUG	PMID[24377852]
NPO22550	Paeonia suffruticosa	Species	Paeoniaceae	Eukaryota	n.a.	flower	n.a.	PMID[24504864]
NPO22550	Paeonia suffruticosa	Species	Paeoniaceae	Eukaryota	Flowers	LuoYang, HeNan, China	n.a.	PMID[24621197]
NPO9798	Paeonia lactiflora	Species	Paeoniaceae	Eukaryota	n.a.	root	n.a.	PMID[26838074]
NPO9798	Paeonia lactiflora	Species	Paeoniaceae	Eukaryota	n.a.	root	n.a.	PMID[27313650]
NPO9798	Paeonia lactiflora	Species	Paeoniaceae	Eukaryota	n.a.	root	n.a.	PMID[27429639]
NPO9798	Paeonia lactiflora	Species	Paeoniaceae	Eukaryota	Roots	n.a.	n.a.	PMID[29741372]
NPO9798	Paeonia lactiflora	Species	Paeoniaceae	Eukaryota	Seeds	HeZe, ShanDong, China	early autumn (from August to the beginning of September	PMID[32545196]
NPO9798	Paeonia lactiflora	Species	Paeoniaceae	Eukaryota	Roots	n.a.	n.a.	PMID[32951423]
NPO9798	Paeonia lactiflora	Species	Paeoniaceae	Eukaryota	Seeds	Xinjiang,China		PMID[33063333]
NPO22550	Paeonia suffruticosa	Species	Paeoniaceae	Eukaryota	n.a.	n.a.	n.a.	Database[COCONUT]
NPO9798	Paeonia lactiflora	Species	Paeoniaceae	Eukaryota	n.a.	n.a.	n.a.	Database[COCONUT]
NPO9798	Paeonia lactiflora	Species	Paeoniaceae	Eukaryota	n.a.	n.a.	n.a.	Database[HerDing]
NPO22550	Paeonia suffruticosa	Species	Paeoniaceae	Eukaryota	n.a.	n.a.	n.a.	Database[TCMID]
NPO9798	Paeonia lactiflora	Species	Paeoniaceae	Eukaryota	n.a.	n.a.	n.a.	Database[TCMID]
NPO22550	Paeonia suffruticosa	Species	Paeoniaceae	Eukaryota	n.a.	n.a.	n.a.	Database[TCM_Taiwan]
NPO9798	Paeonia lactiflora	Species	Paeoniaceae	Eukaryota	n.a.	n.a.	n.a.	Database[TCM_Taiwan]
NPO22550	Paeonia suffruticosa	Species	Paeoniaceae	Eukaryota	n.a.	n.a.	n.a.	Database[TM-MC]
NPO9798	Paeonia lactiflora	Species	Paeoniaceae	Eukaryota	n.a.	n.a.	n.a.	Database[TM-MC]
NPO22550	Paeonia suffruticosa	Species	Paeoniaceae	Eukaryota	n.a.	n.a.	n.a.	Database[UNPD]
NPO9798	Paeonia lactiflora	Species	Paeoniaceae	Eukaryota	n.a.	n.a.	n.a.	Database[UNPD]

Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
☉ UNPD: Universal Natural Products Database [PMID: 23638153].
☉ StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
☉ TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
☉ TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
☉ TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
☉ TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
☉ HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
☉ MetaboLights: a metabolomics database [PMID: 27010336].
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

NP Quantity Composition/Concentration

Organism ID	Organism Name	Organism Material Preparation	Organism Part	NP Quantity (Standard)	NP Quantity (Minimum)	NP Quantity (Maximum)	Quantity Unit	Reference

Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
☉ DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
☉ PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

Biological Activity

Activity Type	# Activity
IC50	1
INH	2

Activity Type	# Activity
Cell line	1
Others	2

Molecular-level activity

Target ID	Target Type	Target Name	Target Organism	Activity Type	Activity Relation	Value	Unit	Reference

In vitro activity

Target ID	Target Type	Target Name	Target Organism	Activity Type	Activity Relation	Value	Unit	Reference
NPT113	Cell line	RAW264.7	Mus musculus	IC50	>	100000.0	nM	PMID[23067550]
NPT610	Others	Molecular identity unknown	n.a.	INH	=	0.25	mM	PMID[24377852]
NPT610	Others	Molecular identity unknown	n.a.	INH	=	0.14	mM	PMID[24377852]

In vivo activity

Target ID	Target Type	Target Name	Target Organism	Activity Type	Activity Relation	Value	Unit	Reference

Experimental ADME

Experiment Model	Experiment Tissue	ADME Type	ADME Relation	ADME Value	ADME Unit	Reference

Experimental Toxicity

Quantitative toxicity

Experiment Model	Experiment Organism	Toxicity Type	Toxicity Relation	Toxicity Value	Toxicity Unit	Reference

Common Abbreviations:
LC: Lethal Concentration; LD: Lethal Dose; LT:Lethal Time; NOAEL: No-observed-adverse-effect Level; BMDL: Benchmark Dose Lower Confidence Limit; BMD: Benchmark Dose; BMC:Benchmark Concentration; LOAEL: Lowest Observed Adverse Effect Level; RfD:Reference Dose; RfC:Reference Concentration; MRL: Minimal Risk Level; MEG: Maximum Exposure Guideline; PAC: Protective Action Criteria

Categorical toxicity labels

Hepatotoxicity	Carcinogenicity	Mutagenicity	Cardiotoxicity	Respiratory Toxicity	Eye Irritation	Endocrine Disruption

Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP toxicity records from domain-specific databases. These databases include:
☉ ToxValDB: a curated database that compiles quantitative toxicity values for chemicals from diverse public sources to support toxicological research and risk assessment.
☉ TOXRIC: a comprehensive, free-to-access, online database providing toxicological/feature data. The toxicity labels are retrieved from this database. [PMID: 36400569]

Chemically structural similarity

Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes approximately 50,000 NPs with experimentally-derived bioactivity available in NPASS)

Similarity is measured using the Tanimoto coefficient (Tc) , which compares the binary fingerprints of two molecules. Tc is calculated as the intersection divided by the union of '1' bits in the fingerprints, ranging from 0 to 1, with 1 indicating highest similarity.

● The left chart: Distribution of similarity level between NPC195114 and all remaining natural products in the NPASS database.
● The right table: Most similar natural products (Tc>=0.5 or Top200).

range	Tanimoto Coefficient
0-0.1	12871
0.1-0.2	33726
0.2-0.3	3022
0.3-0.4	179
0.4-0.5	26
0.5-0.6	7
0.6-0.7	15
0.7-0.8	0
0.8-0.85	1
0.85-0.9	4
0.9-0.95	1
0.95-1	0

Similarity Score	Similarity Level	Natural Product ID
0.9114	High Similarity	NPC88176
0.8916	High Similarity	NPC80360
0.8675	High Similarity	NPC469396
0.8675	High Similarity	NPC469458
0.8675	High Similarity	NPC149002
0.8276	Intermediate Similarity	NPC148185
0.7831	Intermediate Similarity	NPC34066
0.7831	Intermediate Similarity	NPC190862
0.7738	Intermediate Similarity	NPC293568
0.7738	Intermediate Similarity	NPC161626
0.734	Intermediate Similarity	NPC188217
0.6848	Remote Similarity	NPC469398
0.6837	Remote Similarity	NPC477617
0.6596	Remote Similarity	NPC469418
0.6591	Remote Similarity	NPC303429
0.6591	Remote Similarity	NPC56594
0.6531	Remote Similarity	NPC478828
0.6471	Remote Similarity	NPC469397
0.6458	Remote Similarity	NPC260300
0.6337	Remote Similarity	NPC469421
0.6304	Remote Similarity	NPC120012
0.6277	Remote Similarity	NPC469419
0.625	Remote Similarity	NPC469438
0.6176	Remote Similarity	NPC478829
0.6117	Remote Similarity	NPC478826
0.6117	Remote Similarity	NPC478827
0.5638	Remote Similarity	NPC469417
0.5567	Remote Similarity	NPC117943
0.5532	Remote Similarity	NPC469448
0.5521	Remote Similarity	NPC469422
0.5281	Remote Similarity	NPC140151
0.5096	Remote Similarity	NPC265600
0.5052	Remote Similarity	NPC469399

Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

● The left chart: Distribution of similarity level between NPC195114 and all drugs/candidates.
● The right table: Most similar clinical/approved drugs (Tc>=0.5 or Top200).

range	Tanimoto Coefficient
0-0.1	4728
0.1-0.2	4371
0.2-0.3	49
0.3-0.4	2
0.4-0.5	0
0.5-0.6	0
0.6-0.7	0
0.7-0.8	0
0.8-0.85	0
0.85-0.9	0
0.9-0.95	0
0.95-1	0

Similarity Score	Similarity Level	Drug ID	Developmental Stage
		NPD

Bioactivity similarity

Similar Natural Products in NPASS

Similarity level is defined by Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
☉ A: chemistry similarity;
☉ B: biological targets similarity;
☉ C: networks similarity;
☉ D: cell-based bioactivity similarity;
☉ E: similarity based on clinical data.
Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity

B: biological targets similarity

C: networks similarity

D: cell-based bioactivity similarity

E: similarity based on clinical data