Natural Product: NPC96031

Natural Product ID:  NPC96031
Common Name:   Gramniphenol D
IUPAC Name:   1,4-dihydroxy-7-[(2S)-2-hydroxy-3-methylbut-3-enoxy]-5-methoxyfluoren-9-one
Synonyms:   Gramniphenol D
Molecular Formula:   C19H18O6
Standard InCHIKey:  DEGBJQLDDFJQRR-CQSZACIVSA-N
Standard InCHI:  InChI=1S/C19H18O6/c1-9(2)14(22)8-25-10-6-11-16(15(7-10)24-3)17-12(20)4-5-13(21)18(17)19(11)23/h4-7,14,20-22H,1,8H2,2-3H3/t14-/m1/s1
Canonical SMILES:  COc1cc(OC[C@H](C(=C)C)O)cc2c1c1c(O)ccc(c1C2=O)O
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO33109 arundina gramnifolia Species Orchidaceae Eukaryota PMID[23368966]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT1452 Cell Line C8166 Homo sapiens CC50 > 200 ug/ml 9358643
NPT2 Others Unspecified Ratio CC50/EC50 > 137 22168134
NPT786 Organism Tobacco mosaic virus Tobacco mosaic virus Inhibition = 13.3 % PubChem BioAssay data set
NPT786 Organism Tobacco mosaic virus Tobacco mosaic virus Inhibition = 11.4 % PubChem BioAssay data set
NPT24 Organism Human immunodeficiency virus 1 Human immunodeficiency virus 1 EC50 = 1.46 ug/ml 16562846
NPT786 Organism Tobacco mosaic virus Tobacco mosaic virus IC50 = 129200 nM 17844994

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC96031 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9605 High Similarity NPC303950
0.9286 High Similarity NPC474843
0.9276 High Similarity NPC216624
0.9114 High Similarity NPC329091
0.9062 High Similarity NPC472402
0.9057 High Similarity NPC471976
0.9051 High Similarity NPC477833
0.9038 High Similarity NPC207624
0.9012 High Similarity NPC53640
0.9006 High Similarity NPC475985
0.9006 High Similarity NPC133065
0.9 High Similarity NPC3629
0.8974 High Similarity NPC472423
0.8974 High Similarity NPC193976
0.8974 High Similarity NPC474772
0.8974 High Similarity NPC115324
0.8974 High Similarity NPC58668
0.8974 High Similarity NPC106372
0.8974 High Similarity NPC23668
0.8974 High Similarity NPC474744
0.8957 High Similarity NPC247973
0.8951 High Similarity NPC326520
0.8951 High Similarity NPC39306
0.8944 High Similarity NPC84515
0.8944 High Similarity NPC312056
0.8944 High Similarity NPC472964
0.8938 High Similarity NPC470810
0.8938 High Similarity NPC472902
0.8931 High Similarity NPC474208
0.8931 High Similarity NPC210084
0.8931 High Similarity NPC48208
0.8931 High Similarity NPC181960
0.8931 High Similarity NPC241904
0.8931 High Similarity NPC162869
0.8931 High Similarity NPC99597
0.8931 High Similarity NPC300727
0.8931 High Similarity NPC474836
0.8931 High Similarity NPC470402
0.8931 High Similarity NPC156057
0.8931 High Similarity NPC475267
0.8924 High Similarity NPC148938
0.8924 High Similarity NPC37392
0.8924 High Similarity NPC67396
0.8917 High Similarity NPC142308
0.891 High Similarity NPC37348
0.891 High Similarity NPC227122
0.891 High Similarity NPC472421
0.8896 High Similarity NPC170245
0.8889 High Similarity NPC197168
0.8889 High Similarity NPC7483
0.8882 High Similarity NPC30655
0.8882 High Similarity NPC474186
0.8882 High Similarity NPC74854
0.8882 High Similarity NPC308992
0.8882 High Similarity NPC103752
0.8882 High Similarity NPC269117
0.8882 High Similarity NPC474187
0.8882 High Similarity NPC188486
0.8882 High Similarity NPC45124
0.8882 High Similarity NPC18714
0.8882 High Similarity NPC49108
0.8875 High Similarity NPC476242
0.8868 High Similarity NPC235165
0.8868 High Similarity NPC164427
0.8868 High Similarity NPC24640
0.8868 High Similarity NPC78492
0.8868 High Similarity NPC255106
0.8868 High Similarity NPC208152
0.8868 High Similarity NPC274730
0.8868 High Similarity NPC472916
0.8861 High Similarity NPC135522
0.8861 High Similarity NPC235333
0.8861 High Similarity NPC89474
0.8861 High Similarity NPC280937
0.8861 High Similarity NPC472915
0.8854 High Similarity NPC215921
0.8854 High Similarity NPC70016
0.8854 High Similarity NPC244577
0.8854 High Similarity NPC471676
0.8854 High Similarity NPC472420
0.8854 High Similarity NPC240768
0.8854 High Similarity NPC263384
0.8854 High Similarity NPC472422
0.8854 High Similarity NPC200773
0.8854 High Similarity NPC471229
0.8846 High Similarity NPC266499
0.8841 High Similarity NPC117854
0.8841 High Similarity NPC225419
0.8841 High Similarity NPC6588
0.8841 High Similarity NPC477154
0.8834 High Similarity NPC234052
0.8834 High Similarity NPC473286
0.8834 High Similarity NPC25361
0.8827 High Similarity NPC81679
0.8827 High Similarity NPC473961
0.882 High Similarity NPC321399
0.882 High Similarity NPC263449
0.882 High Similarity NPC474287
0.882 High Similarity NPC475886
0.882 High Similarity NPC36217
0.882 High Similarity NPC56085
0.882 High Similarity NPC220582
0.882 High Similarity NPC304839
0.882 High Similarity NPC228785
0.882 High Similarity NPC14353
0.8812 High Similarity NPC217677
0.8812 High Similarity NPC472911
0.8812 High Similarity NPC469584
0.8812 High Similarity NPC96342
0.8812 High Similarity NPC472913
0.8812 High Similarity NPC165977
0.8812 High Similarity NPC472914
0.8812 High Similarity NPC96167
0.8812 High Similarity NPC299520
0.8812 High Similarity NPC245758
0.8812 High Similarity NPC129684
0.8812 High Similarity NPC222814
0.8812 High Similarity NPC164110
0.8812 High Similarity NPC246647
0.8812 High Similarity NPC212967
0.8812 High Similarity NPC196448
0.8812 High Similarity NPC472910
0.8805 High Similarity NPC213936
0.8805 High Similarity NPC255807
0.8805 High Similarity NPC20830
0.8805 High Similarity NPC31018
0.8805 High Similarity NPC472909
0.8805 High Similarity NPC213622
0.8805 High Similarity NPC175192
0.8805 High Similarity NPC99199
0.8805 High Similarity NPC297531
0.8805 High Similarity NPC2928
0.8805 High Similarity NPC256612
0.8797 High Similarity NPC470340
0.8797 High Similarity NPC327269
0.8797 High Similarity NPC31627
0.8797 High Similarity NPC171651
0.8797 High Similarity NPC243171
0.8797 High Similarity NPC476238
0.8797 High Similarity NPC285623
0.8797 High Similarity NPC473996
0.8797 High Similarity NPC35567
0.8795 High Similarity NPC260263
0.879 High Similarity NPC267117
0.8782 High Similarity NPC218569
0.8782 High Similarity NPC186397
0.8782 High Similarity NPC37135
0.878 High Similarity NPC277480
0.878 High Similarity NPC477517
0.878 High Similarity NPC128293
0.8774 High Similarity NPC299011
0.8774 High Similarity NPC316769
0.8773 High Similarity NPC329669
0.8773 High Similarity NPC220313
0.8773 High Similarity NPC472278
0.8773 High Similarity NPC473313
0.8773 High Similarity NPC124038
0.8773 High Similarity NPC270837
0.8765 High Similarity NPC40491
0.8765 High Similarity NPC278052
0.8765 High Similarity NPC32694
0.8765 High Similarity NPC474351
0.8765 High Similarity NPC61010
0.8765 High Similarity NPC475883
0.8765 High Similarity NPC66288
0.8758 High Similarity NPC196879
0.8758 High Similarity NPC100123
0.8758 High Similarity NPC250214
0.8758 High Similarity NPC210459
0.8758 High Similarity NPC152904
0.8758 High Similarity NPC195832
0.8758 High Similarity NPC16935
0.8758 High Similarity NPC186113
0.8758 High Similarity NPC95936
0.875 High Similarity NPC45131
0.875 High Similarity NPC201837
0.875 High Similarity NPC142339
0.875 High Similarity NPC317383
0.875 High Similarity NPC180924
0.8742 High Similarity NPC69394
0.8742 High Similarity NPC7989
0.8742 High Similarity NPC145379
0.8742 High Similarity NPC203080
0.8742 High Similarity NPC223701
0.8742 High Similarity NPC88645
0.8742 High Similarity NPC183878
0.8742 High Similarity NPC176775
0.8742 High Similarity NPC47781
0.8742 High Similarity NPC469405
0.8742 High Similarity NPC95842
0.8742 High Similarity NPC293286
0.8742 High Similarity NPC167091
0.8742 High Similarity NPC178964
0.8742 High Similarity NPC206238
0.8742 High Similarity NPC22519
0.8742 High Similarity NPC25127
0.8742 High Similarity NPC472583
0.8742 High Similarity NPC124714
0.8742 High Similarity NPC280530
0.8742 High Similarity NPC160951

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC96031 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8742 High Similarity NPD2801 Approved
0.8679 High Similarity NPD1934 Approved
0.8634 High Similarity NPD3882 Suspended
0.8625 High Similarity NPD2393 Clinical (unspecified phase)
0.8553 High Similarity NPD4380 Phase 2
0.8503 High Similarity NPD3818 Discontinued
0.8476 Intermediate Similarity NPD5494 Approved
0.8466 Intermediate Similarity NPD4381 Clinical (unspecified phase)
0.8442 Intermediate Similarity NPD1549 Phase 2
0.8395 Intermediate Similarity NPD7819 Suspended
0.8383 Intermediate Similarity NPD6168 Clinical (unspecified phase)
0.8383 Intermediate Similarity NPD6166 Phase 2
0.8383 Intermediate Similarity NPD6167 Clinical (unspecified phase)
0.8377 Intermediate Similarity NPD1550 Clinical (unspecified phase)
0.8377 Intermediate Similarity NPD1552 Clinical (unspecified phase)
0.8354 Intermediate Similarity NPD7075 Discontinued
0.8354 Intermediate Similarity NPD4378 Clinical (unspecified phase)
0.8344 Intermediate Similarity NPD5402 Approved
0.8343 Intermediate Similarity NPD5844 Phase 1
0.8313 Intermediate Similarity NPD6959 Discontinued
0.8312 Intermediate Similarity NPD2796 Approved
0.8291 Intermediate Similarity NPD1511 Approved
0.8291 Intermediate Similarity NPD6799 Approved
0.8282 Intermediate Similarity NPD7096 Clinical (unspecified phase)
0.8247 Intermediate Similarity NPD1510 Phase 2
0.8224 Intermediate Similarity NPD1240 Approved
0.8221 Intermediate Similarity NPD6801 Discontinued
0.821 Intermediate Similarity NPD6599 Discontinued
0.8198 Intermediate Similarity NPD6559 Discontinued
0.8187 Intermediate Similarity NPD7074 Phase 3
0.8187 Intermediate Similarity NPD1512 Approved
0.8182 Intermediate Similarity NPD4868 Clinical (unspecified phase)
0.8155 Intermediate Similarity NPD6232 Discontinued
0.815 Intermediate Similarity NPD4338 Clinical (unspecified phase)
0.8133 Intermediate Similarity NPD3749 Approved
0.8129 Intermediate Similarity NPD7054 Approved
0.8125 Intermediate Similarity NPD2533 Approved
0.8125 Intermediate Similarity NPD2532 Approved
0.8125 Intermediate Similarity NPD2534 Approved
0.8121 Intermediate Similarity NPD3817 Phase 2
0.8121 Intermediate Similarity NPD8443 Clinical (unspecified phase)
0.8118 Intermediate Similarity NPD7473 Discontinued
0.8117 Intermediate Similarity NPD1607 Approved
0.8089 Intermediate Similarity NPD970 Clinical (unspecified phase)
0.8081 Intermediate Similarity NPD7472 Approved
0.8035 Intermediate Similarity NPD6797 Phase 2
0.8023 Intermediate Similarity NPD7804 Clinical (unspecified phase)
0.8012 Intermediate Similarity NPD7410 Clinical (unspecified phase)
0.7989 Intermediate Similarity NPD7251 Discontinued
0.7988 Intermediate Similarity NPD1247 Approved
0.7987 Intermediate Similarity NPD4628 Phase 3
0.7987 Intermediate Similarity NPD3750 Approved
0.7965 Intermediate Similarity NPD3751 Discontinued
0.7962 Intermediate Similarity NPD2935 Discontinued
0.7952 Intermediate Similarity NPD1465 Phase 2
0.7943 Intermediate Similarity NPD7808 Phase 3
0.7939 Intermediate Similarity NPD7411 Suspended
0.7925 Intermediate Similarity NPD2800 Approved
0.7914 Intermediate Similarity NPD5403 Approved
0.7911 Intermediate Similarity NPD2344 Approved
0.7895 Intermediate Similarity NPD3926 Phase 2
0.7889 Intermediate Similarity NPD7879 Clinical (unspecified phase)
0.7882 Intermediate Similarity NPD7199 Phase 2
0.7857 Intermediate Similarity NPD7768 Phase 2
0.7849 Intermediate Similarity NPD7852 Clinical (unspecified phase)
0.7836 Intermediate Similarity NPD3787 Discontinued
0.7829 Intermediate Similarity NPD7993 Clinical (unspecified phase)
0.7805 Intermediate Similarity NPD920 Approved
0.7791 Intermediate Similarity NPD5401 Approved
0.7756 Intermediate Similarity NPD943 Approved
0.7736 Intermediate Similarity NPD1551 Phase 2
0.7716 Intermediate Similarity NPD2309 Approved
0.7711 Intermediate Similarity NPD3226 Approved
0.7688 Intermediate Similarity NPD7184 Clinical (unspecified phase)
0.7683 Intermediate Similarity NPD642 Clinical (unspecified phase)
0.768 Intermediate Similarity NPD8397 Clinical (unspecified phase)
0.7673 Intermediate Similarity NPD3748 Approved
0.7673 Intermediate Similarity NPD1509 Clinical (unspecified phase)
0.7661 Intermediate Similarity NPD919 Approved
0.7654 Intermediate Similarity NPD1878 Clinical (unspecified phase)
0.7628 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.7598 Intermediate Similarity NPD8312 Approved
0.7598 Intermediate Similarity NPD8313 Approved
0.7594 Intermediate Similarity NPD6777 Approved
0.7594 Intermediate Similarity NPD6779 Approved
0.7594 Intermediate Similarity NPD6781 Approved
0.7594 Intermediate Similarity NPD6776 Approved
0.7594 Intermediate Similarity NPD6778 Approved
0.7594 Intermediate Similarity NPD6782 Approved
0.7594 Intermediate Similarity NPD6780 Approved
0.7593 Intermediate Similarity NPD1243 Approved
0.7593 Intermediate Similarity NPD7421 Clinical (unspecified phase)
0.7578 Intermediate Similarity NPD2346 Discontinued
0.7576 Intermediate Similarity NPD7004 Clinical (unspecified phase)
0.7569 Intermediate Similarity NPD8434 Phase 2
0.7562 Intermediate Similarity NPD651 Clinical (unspecified phase)
0.7562 Intermediate Similarity NPD2799 Discontinued
0.7561 Intermediate Similarity NPD643 Clinical (unspecified phase)
0.7548 Intermediate Similarity NPD2861 Phase 2
0.7542 Intermediate Similarity NPD4419 Clinical (unspecified phase)
0.7532 Intermediate Similarity NPD1613 Approved
0.7532 Intermediate Similarity NPD1612 Clinical (unspecified phase)
0.7529 Intermediate Similarity NPD5711 Approved
0.7529 Intermediate Similarity NPD5760 Phase 2
0.7529 Intermediate Similarity NPD5710 Approved
0.7529 Intermediate Similarity NPD5761 Phase 2
0.7528 Intermediate Similarity NPD5953 Discontinued
0.7516 Intermediate Similarity NPD6099 Approved
0.7516 Intermediate Similarity NPD6100 Approved
0.7515 Intermediate Similarity NPD7390 Discontinued
0.7514 Intermediate Similarity NPD7286 Phase 2
0.7484 Intermediate Similarity NPD230 Phase 1
0.7474 Intermediate Similarity NPD7435 Discontinued
0.7471 Intermediate Similarity NPD37 Approved
0.7457 Intermediate Similarity NPD6234 Discontinued
0.7453 Intermediate Similarity NPD7033 Discontinued
0.7452 Intermediate Similarity NPD3027 Phase 3
0.7442 Intermediate Similarity NPD4965 Approved
0.7442 Intermediate Similarity NPD4966 Approved
0.7442 Intermediate Similarity NPD4967 Phase 2
0.7429 Intermediate Similarity NPD7229 Phase 3
0.7425 Intermediate Similarity NPD6273 Approved
0.7418 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.7407 Intermediate Similarity NPD7501 Clinical (unspecified phase)
0.7396 Intermediate Similarity NPD5808 Clinical (unspecified phase)
0.7389 Intermediate Similarity NPD7685 Pre-registration
0.7385 Intermediate Similarity NPD7783 Phase 2
0.7385 Intermediate Similarity NPD7782 Clinical (unspecified phase)
0.7382 Intermediate Similarity NPD7697 Approved
0.7382 Intermediate Similarity NPD7698 Approved
0.7382 Intermediate Similarity NPD7696 Phase 3
0.7381 Intermediate Similarity NPD6980 Clinical (unspecified phase)
0.7377 Intermediate Similarity NPD8150 Discontinued
0.7375 Intermediate Similarity NPD447 Suspended
0.7375 Intermediate Similarity NPD6355 Discontinued
0.7371 Intermediate Similarity NPD8151 Discontinued
0.7368 Intermediate Similarity NPD6844 Discontinued
0.7355 Intermediate Similarity NPD1876 Approved
0.7344 Intermediate Similarity NPD7871 Phase 2
0.7344 Intermediate Similarity NPD7870 Phase 2
0.733 Intermediate Similarity NPD6823 Phase 2
0.7329 Intermediate Similarity NPD6651 Approved
0.7326 Intermediate Similarity NPD6534 Approved
0.7326 Intermediate Similarity NPD6535 Approved
0.732 Intermediate Similarity NPD7701 Phase 2
0.7308 Intermediate Similarity NPD1203 Approved
0.7296 Intermediate Similarity NPD2313 Discontinued
0.7289 Intermediate Similarity NPD6190 Approved
0.7278 Intermediate Similarity NPD6832 Phase 2
0.7278 Intermediate Similarity NPD4908 Phase 1
0.7278 Intermediate Similarity NPD1529 Clinical (unspecified phase)
0.7273 Intermediate Similarity NPD1547 Clinical (unspecified phase)
0.7267 Intermediate Similarity NPD1899 Clinical (unspecified phase)
0.7263 Intermediate Similarity NPD7228 Approved
0.7256 Intermediate Similarity NPD5763 Approved
0.7256 Intermediate Similarity NPD1471 Phase 3
0.7256 Intermediate Similarity NPD5762 Approved
0.7249 Intermediate Similarity NPD8090 Clinical (unspecified phase)
0.7245 Intermediate Similarity NPD7875 Clinical (unspecified phase)
0.7245 Intermediate Similarity NPD7874 Approved
0.7235 Intermediate Similarity NPD1653 Approved
0.7234 Intermediate Similarity NPD4360 Phase 2
0.7234 Intermediate Similarity NPD4363 Phase 3
0.7233 Intermediate Similarity NPD4625 Phase 3
0.7229 Intermediate Similarity NPD6398 Clinical (unspecified phase)
0.7215 Intermediate Similarity NPD1530 Clinical (unspecified phase)
0.7212 Intermediate Similarity NPD2424 Discontinued
0.7211 Intermediate Similarity NPD7699 Phase 2
0.7211 Intermediate Similarity NPD7700 Phase 2
0.7208 Intermediate Similarity NPD7801 Approved
0.7205 Intermediate Similarity NPD4060 Phase 1
0.7204 Intermediate Similarity NPD4287 Approved
0.7198 Intermediate Similarity NPD3658 Clinical (unspecified phase)
0.7197 Intermediate Similarity NPD1470 Approved
0.7193 Intermediate Similarity NPD2649 Approved
0.7193 Intermediate Similarity NPD2651 Approved
0.7188 Intermediate Similarity NPD3764 Approved
0.7188 Intermediate Similarity NPD4907 Clinical (unspecified phase)
0.7184 Intermediate Similarity NPD2296 Approved
0.7175 Intermediate Similarity NPD8127 Discontinued
0.7161 Intermediate Similarity NPD1610 Phase 2
0.716 Intermediate Similarity NPD4662 Approved
0.716 Intermediate Similarity NPD4661 Approved
0.7152 Intermediate Similarity NPD2798 Approved
0.7152 Intermediate Similarity NPD5647 Approved
0.7152 Intermediate Similarity NPD2343 Clinical (unspecified phase)
0.7151 Intermediate Similarity NPD2403 Approved
0.7151 Intermediate Similarity NPD4575 Clinical (unspecified phase)
0.7143 Intermediate Similarity NPD6233 Phase 2
0.7126 Intermediate Similarity NPD3892 Phase 2
0.7115 Intermediate Similarity NPD1608 Approved
0.7115 Intermediate Similarity NPD9717 Approved
0.7107 Intermediate Similarity NPD9494 Approved
0.7105 Intermediate Similarity NPD4361 Phase 2
0.7105 Intermediate Similarity NPD4362 Clinical (unspecified phase)
0.7101 Intermediate Similarity NPD6143 Clinical (unspecified phase)
0.7095 Intermediate Similarity NPD5242 Approved
0.7092 Intermediate Similarity NPD7584 Approved
0.7091 Intermediate Similarity NPD5405 Approved
0.7091 Intermediate Similarity NPD5404 Approved

Structure

External Identifiers

PubChem CID   71578156
ChEMBL   CHEMBL2333778
ZINC  

Physicochemical Properties

Molecular Weight:  342.11
ALogP:  -0.7355
MLogP:  2.89
XLogP:  0.625
# Rotatable Bonds:  10
Polar Surface Area:  96.22
# H-Bond Aceptor:  2
# H-Bond Donor:  3
# Rings:  3
# Heavy Atoms:  25

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs