Natural Product: NPC470266

Natural Product ID:  NPC470266
Common Name:   Ageline A
IUPAC Name:   7-[(2E,6E)-3,7-dimethyl-9-[(1R,6S)-1,2,6-trimethylcyclohex-2-en-1-yl]nona-2,6-dienyl]-9-methylpurin-9-ium-6-amine;chloride
Synonyms:  
Molecular Formula:   C26H40N5.ClH
Standard InCHIKey:  NGAASWSXRQKIFQ-LPMOHPDMSA-M
Standard InCHI:  InChI=1S/C26H40N5.ClH/c1-19(13-15-26(5)21(3)11-8-12-22(26)4)9-7-10-20(2)14-16-31-18-30(6)25-23(31)24(27)28-17-29-25;/h9,11,14,17-18,22H,7-8,10,12-13,15-16H2,1-6H3,(H2,27,28,29);1H/q+1;/p-1/b19-9+,20-14+;/t22-,26-;/m0./s1
Canonical SMILES:  C/C(=CCC/C(=C/Cn1c[n+](c2c1c(N)ncn2)C)/C)/CC[C@]1(C)[C@@H](C)CCC=C1C.[Cl-]
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO11199 Agelas nakamurai Species Agelasidae Eukaryota Okinawan PMID[26083682]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT88 Organism Mycobacterium tuberculosis Mycobacterium tuberculosis MIC = 3.13 ug/ml 8411013
NPT397 Cell Line NCI-H460 Homo sapiens GI50 = 3700 nM 23832254
NPT2 Others Unspecified IC50 = 24000 nM 19110424
NPT602 Organism Mycobacterium smegmatis Mycobacterium smegmatis IZ = 20 mm 8450319
NPT175 Organism Enterococcus faecalis Enterococcus faecalis MIC = 2 ug/ml 19226152
NPT1521 Organism Stenotrophomonas maltophilia Stenotrophomonas maltophilia MIC = 16 ug/ml 8496706
NPT1033 Organism Enterobacter cloacae Enterobacter cloacae MIC = 32 ug/ml 8496706
NPT16 Organism Staphylococcus aureus Staphylococcus aureus MIC = 2 ug/ml 25442304
NPT20 Organism Candida albicans Candida albicans MIC = 4 ug/ml 10.6019/CHEMBL1201861
NPT85 Organism Filobasidiella neoformans Cryptococcus neoformans MIC = 2 ug/ml 10.6019/CHEMBL1201861
NPT2 Others Unspecified IC50 = 16000 nM 17562796
NPT1522 Organism Neisseria gonorrhoeae Neisseria gonorrhoeae MIC = 2 ug/ml 24742203
NPT178 Individual Protein Protein-tyrosine phosphatase 1B Homo sapiens IC50 > 24000 nM 23758051
NPT168 Cell Line P388 Mus musculus ED50 = 21.8 nM DrugMatrix in vivo data: Biochemistry
NPT1081 Cell Line BXPC-3 Homo sapiens GI50 = 3500 nM DrugMatrix in vivo data: Biochemistry
NPT729 Organism Micrococcus luteus Micrococcus luteus MIC < 0.5 ug/ml 20350806
NPT19 Organism Escherichia coli Escherichia coli MIC = 32 ug/ml 20350806
NPT575 Cell Line KM-20L2 Homo sapiens GI50 = 3500 nM 15267241
NPT90 Cell Line DU-145 Homo sapiens GI50 = 4200 nM 15911319
NPT602 Organism Mycobacterium smegmatis Mycobacterium smegmatis IZ = 14 mm 17261620
NPT395 Cell Line SF-268 Homo sapiens GI50 = 3500 nM 19349520
NPT83 Cell Line MCF7 Homo sapiens GI50 = 3900 nM 19349520
NPT1118 Organism Streptococcus pneumoniae Streptococcus pneumoniae MIC = 16 ug/ml 19349520

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC470266 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9771 High Similarity NPC476522
0.9771 High Similarity NPC476013
0.9771 High Similarity NPC476520
0.9771 High Similarity NPC474986
0.9767 High Similarity NPC296437
0.9697 High Similarity NPC476521
0.9695 High Similarity NPC476528
0.9695 High Similarity NPC476433
0.9407 High Similarity NPC476408
0.9078 High Similarity NPC472834
0.9014 High Similarity NPC472833
0.8828 High Similarity NPC18308
0.8828 High Similarity NPC472832
0.8786 High Similarity NPC244700
0.8239 Intermediate Similarity NPC217656
0.8 Intermediate Similarity NPC473585
0.7931 Intermediate Similarity NPC89139
0.7805 Intermediate Similarity NPC265111
0.7266 Intermediate Similarity NPC87981
0.7266 Intermediate Similarity NPC174114
0.7067 Intermediate Similarity NPC167285
0.6954 Remote Similarity NPC76544
0.6954 Remote Similarity NPC226184
0.6939 Remote Similarity NPC57279
0.6905 Remote Similarity NPC317054
0.6716 Remote Similarity NPC18335
0.6716 Remote Similarity NPC476564
0.6667 Remote Similarity NPC164845
0.6577 Remote Similarity NPC104011
0.6549 Remote Similarity NPC68938
0.6494 Remote Similarity NPC33996
0.6475 Remote Similarity NPC4837
0.6475 Remote Similarity NPC312187
0.6452 Remote Similarity NPC129756
0.6424 Remote Similarity NPC239737
0.6306 Remote Similarity NPC317821
0.6258 Remote Similarity NPC150853
0.625 Remote Similarity NPC246193
0.6243 Remote Similarity NPC313514
0.6229 Remote Similarity NPC313897
0.6228 Remote Similarity NPC93365
0.6207 Remote Similarity NPC189314
0.6203 Remote Similarity NPC209525
0.6203 Remote Similarity NPC161659
0.6158 Remote Similarity NPC477119
0.6125 Remote Similarity NPC314152
0.6125 Remote Similarity NPC229974
0.6111 Remote Similarity NPC189068
0.6074 Remote Similarity NPC219313
0.6074 Remote Similarity NPC309832
0.6049 Remote Similarity NPC156461
0.6049 Remote Similarity NPC21448
0.6049 Remote Similarity NPC107374
0.6036 Remote Similarity NPC476219
0.6036 Remote Similarity NPC476297
0.6026 Remote Similarity NPC248007
0.6023 Remote Similarity NPC300238
0.6012 Remote Similarity NPC164665
0.6012 Remote Similarity NPC469975
0.6 Remote Similarity NPC136349
0.5976 Remote Similarity NPC269827
0.5956 Remote Similarity NPC477118
0.5954 Remote Similarity NPC470203
0.5939 Remote Similarity NPC121222
0.5938 Remote Similarity NPC469308
0.5928 Remote Similarity NPC161224
0.5924 Remote Similarity NPC477120
0.5922 Remote Similarity NPC189261
0.5906 Remote Similarity NPC195140
0.5896 Remote Similarity NPC470204
0.5893 Remote Similarity NPC328479
0.5887 Remote Similarity NPC476099
0.5858 Remote Similarity NPC302778
0.5858 Remote Similarity NPC212551
0.5833 Remote Similarity NPC114209
0.5833 Remote Similarity NPC185991
0.5833 Remote Similarity NPC211025
0.5833 Remote Similarity NPC85689
0.5828 Remote Similarity NPC139776
0.5828 Remote Similarity NPC8590
0.5824 Remote Similarity NPC174802
0.5799 Remote Similarity NPC472816
0.5799 Remote Similarity NPC321814
0.5789 Remote Similarity NPC224076
0.5769 Remote Similarity NPC14330
0.5765 Remote Similarity NPC164952
0.5765 Remote Similarity NPC130586
0.5756 Remote Similarity NPC226245
0.5756 Remote Similarity NPC120070
0.5745 Remote Similarity NPC476561
0.5732 Remote Similarity NPC287876
0.573 Remote Similarity NPC290959
0.5728 Remote Similarity NPC158055
0.5707 Remote Similarity NPC250178
0.5706 Remote Similarity NPC207633
0.5692 Remote Similarity NPC276373
0.5674 Remote Similarity NPC187191
0.5674 Remote Similarity NPC326248
0.5665 Remote Similarity NPC316618
0.5663 Remote Similarity NPC5802
0.5645 Remote Similarity NPC24589
0.5642 Remote Similarity NPC326082
0.5635 Remote Similarity NPC157821
0.5629 Remote Similarity NPC197068
0.5625 Remote Similarity NPC122141
0.5618 Remote Similarity NPC325906
0.5613 Remote Similarity NPC115595

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC470266 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.7483 Intermediate Similarity NPD1058 Discontinued
0.7055 Intermediate Similarity NPD1313 Approved
0.6848 Remote Similarity NPD1333 Phase 3
0.6781 Remote Similarity NPD870 Clinical (unspecified phase)
0.6774 Remote Similarity NPD7158 Phase 1
0.6768 Remote Similarity NPD6074 Clinical (unspecified phase)
0.6727 Remote Similarity NPD1016 Phase 2
0.6727 Remote Similarity NPD1015 Phase 2
0.6716 Remote Similarity NPD8836 Approved
0.6707 Remote Similarity NPD516 Clinical (unspecified phase)
0.6686 Remote Similarity NPD1567 Clinical (unspecified phase)
0.6667 Remote Similarity NPD2593 Clinical (unspecified phase)
0.6647 Remote Similarity NPD5962 Phase 2
0.6644 Remote Similarity NPD9408 Phase 3
0.6622 Remote Similarity NPD9633 Phase 3
0.6603 Remote Similarity NPD4240 Approved
0.659 Remote Similarity NPD2930 Clinical (unspecified phase)
0.6577 Remote Similarity NPD248 Discontinued
0.6554 Remote Similarity NPD3378 Clinical (unspecified phase)
0.6534 Remote Similarity NPD2456 Phase 2
0.6534 Remote Similarity NPD2457 Phase 2
0.6529 Remote Similarity NPD2875 Clinical (unspecified phase)
0.6519 Remote Similarity NPD3485 Clinical (unspecified phase)
0.6509 Remote Similarity NPD1215 Discontinued
0.6494 Remote Similarity NPD3341 Clinical (unspecified phase)
0.6494 Remote Similarity NPD799 Phase 1
0.6471 Remote Similarity NPD2333 Discontinued
0.6448 Remote Similarity NPD7023 Clinical (unspecified phase)
0.6436 Remote Similarity NPD2965 Clinical (unspecified phase)
0.641 Remote Similarity NPD3695 Approved
0.641 Remote Similarity NPD3696 Approved
0.6409 Remote Similarity NPD3419 Clinical (unspecified phase)
0.6398 Remote Similarity NPD6816 Phase 3
0.6386 Remote Similarity NPD2927 Phase 3
0.6358 Remote Similarity NPD5324 Clinical (unspecified phase)
0.6353 Remote Similarity NPD8120 Approved
0.6353 Remote Similarity NPD5269 Clinical (unspecified phase)
0.6353 Remote Similarity NPD8121 Phase 3
0.6352 Remote Similarity NPD171 Discontinued
0.6343 Remote Similarity NPD7111 Discontinued
0.633 Remote Similarity NPD6129 Phase 2
0.6328 Remote Similarity NPD4649 Clinical (unspecified phase)
0.6325 Remote Similarity NPD5969 Clinical (unspecified phase)
0.6316 Remote Similarity NPD2647 Phase 3
0.6307 Remote Similarity NPD5730 Phase 2
0.6307 Remote Similarity NPD40 Phase 2
0.6303 Remote Similarity NPD2524 Discontinued
0.6289 Remote Similarity NPD4352 Phase 1
0.6286 Remote Similarity NPD5843 Discontinued
0.6284 Remote Similarity NPD3431 Approved
0.6284 Remote Similarity NPD3430 Approved
0.6284 Remote Similarity NPD2839 Phase 2
0.6278 Remote Similarity NPD2591 Phase 2
0.6278 Remote Similarity NPD2793 Discontinued
0.6258 Remote Similarity NPD4568 Phase 2
0.625 Remote Similarity NPD3041 Approved
0.6243 Remote Similarity NPD7138 Phase 2
0.6242 Remote Similarity NPD3107 Discontinued
0.6236 Remote Similarity NPD1637 Clinical (unspecified phase)
0.6236 Remote Similarity NPD2526 Phase 2
0.6236 Remote Similarity NPD2523 Phase 2
0.623 Remote Similarity NPD6761 Discontinued
0.623 Remote Similarity NPD7323 Phase 2
0.6229 Remote Similarity NPD3799 Suspended
0.6228 Remote Similarity NPD546 Clinical (unspecified phase)
0.6221 Remote Similarity NPD6794 Approved
0.6216 Remote Similarity NPD306 Approved
0.6215 Remote Similarity NPD1893 Phase 2
0.6215 Remote Similarity NPD1892 Phase 2
0.6207 Remote Similarity NPD8831 Approved
0.6207 Remote Similarity NPD8833 Approved
0.6203 Remote Similarity NPD193 Suspended
0.6196 Remote Similarity NPD7722 Suspended
0.6196 Remote Similarity NPD6619 Phase 3
0.6188 Remote Similarity NPD174 Discontinued
0.6188 Remote Similarity NPD4902 Discontinued
0.618 Remote Similarity NPD5508 Phase 1
0.6167 Remote Similarity NPD5463 Clinical (unspecified phase)
0.6166 Remote Similarity NPD4612 Discontinued
0.6159 Remote Similarity NPD3708 Phase 2
0.615 Remote Similarity NPD5462 Discontinued
0.6146 Remote Similarity NPD2877 Clinical (unspecified phase)
0.6146 Remote Similarity NPD2876 Phase 3
0.6136 Remote Similarity NPD7006 Approved
0.6135 Remote Similarity NPD4183 Phase 3
0.6135 Remote Similarity NPD4182 Phase 3
0.6131 Remote Similarity NPD2646 Discontinued
0.6127 Remote Similarity NPD2478 Clinical (unspecified phase)
0.6126 Remote Similarity NPD2364 Suspended
0.6125 Remote Similarity NPD185 Approved
0.6124 Remote Similarity NPD3409 Phase 1
0.6114 Remote Similarity NPD2452 Phase 2
0.6114 Remote Similarity NPD2450 Phase 2
0.6114 Remote Similarity NPD2453 Phase 2
0.6114 Remote Similarity NPD2451 Phase 2
0.6108 Remote Similarity NPD4615 Phase 2
0.6108 Remote Similarity NPD1257 Approved
0.6102 Remote Similarity NPD2406 Clinical (unspecified phase)
0.6099 Remote Similarity NPD5684 Clinical (unspecified phase)
0.6099 Remote Similarity NPD6721 Phase 1
0.6099 Remote Similarity NPD5683 Clinical (unspecified phase)
0.6099 Remote Similarity NPD5642 Approved
0.6099 Remote Similarity NPD5682 Phase 3
0.6096 Remote Similarity NPD3362 Clinical (unspecified phase)
0.609 Remote Similarity NPD4763 Clinical (unspecified phase)
0.6089 Remote Similarity NPD4716 Approved
0.6087 Remote Similarity NPD2818 Discontinued
0.6082 Remote Similarity NPD2824 Phase 2
0.6069 Remote Similarity NPD509 Phase 3
0.6069 Remote Similarity NPD7988 Suspended
0.6066 Remote Similarity NPD6418 Phase 1
0.6059 Remote Similarity NPD5300 Clinical (unspecified phase)
0.6056 Remote Similarity NPD5806 Clinical (unspecified phase)
0.6056 Remote Similarity NPD4744 Clinical (unspecified phase)
0.6056 Remote Similarity NPD1675 Phase 1
0.6056 Remote Similarity NPD1674 Clinical (unspecified phase)
0.6049 Remote Similarity NPD250 Approved
0.6049 Remote Similarity NPD249 Approved
0.6049 Remote Similarity NPD166 Approved
0.6048 Remote Similarity NPD1029 Clinical (unspecified phase)
0.6048 Remote Similarity NPD1030 Approved
0.6048 Remote Similarity NPD1027 Approved
0.6045 Remote Similarity NPD7297 Phase 2
0.6032 Remote Similarity NPD6468 Clinical (unspecified phase)
0.6032 Remote Similarity NPD6469 Phase 3
0.6031 Remote Similarity NPD7445 Phase 1
0.6026 Remote Similarity NPD9084 Phase 2
0.6023 Remote Similarity NPD6828 Phase 2
0.6023 Remote Similarity NPD6827 Clinical (unspecified phase)
0.6022 Remote Similarity NPD6577 Clinical (unspecified phase)
0.6021 Remote Similarity NPD4142 Discontinued
0.602 Remote Similarity NPD6192 Phase 3
0.6012 Remote Similarity NPD3612 Phase 2
0.6011 Remote Similarity NPD2963 Phase 1
0.601 Remote Similarity NPD5012 Phase 2
0.6 Remote Similarity NPD6520 Phase 3
0.6 Remote Similarity NPD548 Clinical (unspecified phase)
0.6 Remote Similarity NPD702 Clinical (unspecified phase)
0.6 Remote Similarity NPD6521 Phase 3
0.6 Remote Similarity NPD1873 Clinical (unspecified phase)
0.6 Remote Similarity NPD1690 Clinical (unspecified phase)
0.6 Remote Similarity NPD5145 Clinical (unspecified phase)
0.5989 Remote Similarity NPD5996 Clinical (unspecified phase)
0.5988 Remote Similarity NPD1288 Clinical (unspecified phase)
0.5987 Remote Similarity NPD9484 Clinical (unspecified phase)
0.598 Remote Similarity NPD6850 Phase 2
0.598 Remote Similarity NPD6849 Phase 2
0.5979 Remote Similarity NPD2880 Discontinued
0.5978 Remote Similarity NPD2731 Phase 2
0.5978 Remote Similarity NPD1272 Clinical (unspecified phase)
0.5977 Remote Similarity NPD3889 Approved
0.5976 Remote Similarity NPD1303 Phase 1
0.5976 Remote Similarity NPD195 Approved
0.5976 Remote Similarity NPD186 Discovery
0.5974 Remote Similarity NPD1807 Clinical (unspecified phase)
0.5969 Remote Similarity NPD3860 Discontinued
0.5965 Remote Similarity NPD1869 Phase 2
0.596 Remote Similarity NPD2903 Clinical (unspecified phase)
0.596 Remote Similarity NPD2902 Phase 2
0.5959 Remote Similarity NPD757 Phase 3
0.5955 Remote Similarity NPD5666 Phase 2
0.5952 Remote Similarity NPD7502 Clinical (unspecified phase)
0.5946 Remote Similarity NPD7504 Discontinued
0.5944 Remote Similarity NPD3432 Approved
0.5943 Remote Similarity NPD4213 Clinical (unspecified phase)
0.5941 Remote Similarity NPD2624 Phase 2
0.5941 Remote Similarity NPD3405 Phase 3
0.5938 Remote Similarity NPD4318 Clinical (unspecified phase)
0.5938 Remote Similarity NPD6151 Phase 2
0.5934 Remote Similarity NPD4441 Phase 2
0.5924 Remote Similarity NPD5757 Discontinued
0.5924 Remote Similarity NPD9083 Clinical (unspecified phase)
0.5917 Remote Similarity NPD2128 Phase 1
0.5909 Remote Similarity NPD4863 Approved
0.5909 Remote Similarity NPD1354 Approved
0.5909 Remote Similarity NPD1355 Clinical (unspecified phase)
0.5909 Remote Similarity NPD1356 Approved
0.5907 Remote Similarity NPD2807 Discontinued
0.5906 Remote Similarity NPD2150 Discontinued
0.5906 Remote Similarity NPD580 Discontinued
0.5904 Remote Similarity NPD2445 Approved
0.5904 Remote Similarity NPD4709 Approved
0.5904 Remote Similarity NPD2446 Approved
0.5897 Remote Similarity NPD6271 Approved
0.5897 Remote Similarity NPD4023 Clinical (unspecified phase)
0.5892 Remote Similarity NPD3002 Clinical (unspecified phase)
0.5891 Remote Similarity NPD6470 Phase 3
0.589 Remote Similarity NPD3706 Clinical (unspecified phase)
0.5889 Remote Similarity NPD4155 Approved
0.5886 Remote Similarity NPD2134 Approved
0.5886 Remote Similarity NPD2136 Approved
0.5886 Remote Similarity NPD2135 Approved
0.5882 Remote Similarity NPD1658 Discontinued
0.5882 Remote Similarity NPD4854 Phase 3
0.5879 Remote Similarity NPD1895 Discontinued
0.5871 Remote Similarity NPD5079 Phase 2
0.587 Remote Similarity NPD2868 Clinical (unspecified phase)
0.5867 Remote Similarity NPD3905 Phase 3
0.5864 Remote Similarity NPD5885 Approved
0.5862 Remote Similarity NPD2149 Clinical (unspecified phase)

Structure

External Identifiers

PubChem CID   10253609
ChEMBL   CHEMBL193838
ZINC  

Physicochemical Properties

Molecular Weight:  422.33
ALogP:  2.0355
MLogP:  3.77
XLogP:  6.664
# Rotatable Bonds:  15
Polar Surface Area:  60.61
# H-Bond Aceptor:  4
# H-Bond Donor:  1
# Rings:  3
# Heavy Atoms:  31

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