Natural Product: NPC250956

Natural Product ID:  NPC250956
Common Name:   n.a.
IUPAC Name:  
Synonyms:  
Molecular Formula:   C34H52O10
Standard InCHIKey:  RXBPTSDQBCRGFU-ZMRUMRKBSA-N
Standard InCHI:  InChI=1S/C34H52O10/c1-18(35)42-26-15-24-29(3,4)44-28(38)16-27(43-19(2)36)33(24,9)23-12-13-31(7)21(10-11-22(31)32(23,26)8)20-14-25(37)34(40,41-17-20)30(5,6)39/h11,20-21,23-27,37,39-40H,10,12-17H2,1-9H3/t20-,21+,23+,24+,25-,26-,27+,31+,32+,33-,34+/m1/s1
Canonical SMILES:  CC(=O)O[C@@H]1C[C@H]2C(C)(C)OC(=O)C[C@@H]([C@@]2([C@@H]2[C@]1(C)C1=CC[C@H]([C@]1(C)CC2)[C@H]1CO[C@]([C@@H](C1)O)(O)C(O)(C)C)C)OC(=O)C
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO3063 Aphanamixis grandifolia Species Meliaceae Eukaryota Fruits PMID[23772699]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT659 Cell Line SMMC-7721 Homo sapiens IC50 = 670 nM 15620238
NPT181 Cell Line Bel-7402 Homo sapiens IC50 = 1530 nM 25899335

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC250956 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9706 High Similarity NPC218853
0.8932 High Similarity NPC470053
0.8857 High Similarity NPC472655
0.8835 High Similarity NPC470054
0.8824 High Similarity NPC470066
0.8824 High Similarity NPC470067
0.8716 High Similarity NPC234042
0.8716 High Similarity NPC152117
0.8692 High Similarity NPC258323
0.8641 High Similarity NPC470068
0.8636 High Similarity NPC255017
0.8624 High Similarity NPC250481
0.8624 High Similarity NPC285410
0.8624 High Similarity NPC263827
0.8611 High Similarity NPC477070
0.8611 High Similarity NPC477069
0.8559 High Similarity NPC473882
0.8559 High Similarity NPC116024
0.8545 High Similarity NPC243572
0.8545 High Similarity NPC470543
0.8532 High Similarity NPC154856
0.8532 High Similarity NPC52241
0.8532 High Similarity NPC129340
0.8532 High Similarity NPC475317
0.8532 High Similarity NPC101450
0.8519 High Similarity NPC295389
0.8496 Intermediate Similarity NPC239293
0.8468 Intermediate Similarity NPC251309
0.8455 Intermediate Similarity NPC31839
0.8455 Intermediate Similarity NPC272242
0.8455 Intermediate Similarity NPC477073
0.844 Intermediate Similarity NPC265655
0.8426 Intermediate Similarity NPC293512
0.8426 Intermediate Similarity NPC469318
0.8426 Intermediate Similarity NPC473173
0.8421 Intermediate Similarity NPC477071
0.8411 Intermediate Similarity NPC470061
0.8411 Intermediate Similarity NPC470058
0.8411 Intermediate Similarity NPC470059
0.8411 Intermediate Similarity NPC470060
0.8411 Intermediate Similarity NPC470064
0.8411 Intermediate Similarity NPC470057
0.8411 Intermediate Similarity NPC470062
0.8411 Intermediate Similarity NPC470043
0.8393 Intermediate Similarity NPC472274
0.8393 Intermediate Similarity NPC54395
0.8381 Intermediate Similarity NPC167974
0.8378 Intermediate Similarity NPC210420
0.8378 Intermediate Similarity NPC80843
0.8378 Intermediate Similarity NPC474265
0.8378 Intermediate Similarity NPC1046
0.8378 Intermediate Similarity NPC130427
0.8378 Intermediate Similarity NPC233003
0.8378 Intermediate Similarity NPC46388
0.8378 Intermediate Similarity NPC48249
0.8378 Intermediate Similarity NPC37739
0.8364 Intermediate Similarity NPC90630
0.8364 Intermediate Similarity NPC475243
0.8364 Intermediate Similarity NPC242611
0.8364 Intermediate Similarity NPC475134
0.8364 Intermediate Similarity NPC475563
0.8364 Intermediate Similarity NPC470065
0.8364 Intermediate Similarity NPC274507
0.835 Intermediate Similarity NPC473415
0.835 Intermediate Similarity NPC469329
0.835 Intermediate Similarity NPC37787
0.835 Intermediate Similarity NPC180557
0.835 Intermediate Similarity NPC30677
0.8349 Intermediate Similarity NPC472217
0.8349 Intermediate Similarity NPC472219
0.8349 Intermediate Similarity NPC472218
0.8349 Intermediate Similarity NPC195708
0.8349 Intermediate Similarity NPC469845
0.8348 Intermediate Similarity NPC471406
0.8333 Intermediate Similarity NPC297179
0.8333 Intermediate Similarity NPC470587
0.8333 Intermediate Similarity NPC473199
0.8319 Intermediate Similarity NPC244127
0.8318 Intermediate Similarity NPC218513
0.8318 Intermediate Similarity NPC55954
0.8304 Intermediate Similarity NPC47063
0.8304 Intermediate Similarity NPC238935
0.8304 Intermediate Similarity NPC138334
0.8304 Intermediate Similarity NPC477074
0.8304 Intermediate Similarity NPC269315
0.8304 Intermediate Similarity NPC271138
0.8304 Intermediate Similarity NPC189884
0.8304 Intermediate Similarity NPC102619
0.8304 Intermediate Similarity NPC204458
0.8304 Intermediate Similarity NPC475208
0.8288 Intermediate Similarity NPC211798
0.8288 Intermediate Similarity NPC473481
0.8288 Intermediate Similarity NPC475668
0.8288 Intermediate Similarity NPC235841
0.8288 Intermediate Similarity NPC473921
0.8288 Intermediate Similarity NPC475480
0.8288 Intermediate Similarity NPC292196
0.8288 Intermediate Similarity NPC11035
0.8288 Intermediate Similarity NPC297208
0.8288 Intermediate Similarity NPC108748
0.8288 Intermediate Similarity NPC30397
0.8288 Intermediate Similarity NPC190837
0.8288 Intermediate Similarity NPC191763
0.8286 Intermediate Similarity NPC119036
0.8273 Intermediate Similarity NPC137917
0.8273 Intermediate Similarity NPC237503
0.8273 Intermediate Similarity NPC5475
0.8273 Intermediate Similarity NPC472216
0.8273 Intermediate Similarity NPC118225
0.8273 Intermediate Similarity NPC41405
0.8273 Intermediate Similarity NPC173905
0.8273 Intermediate Similarity NPC306746
0.8273 Intermediate Similarity NPC284828
0.8273 Intermediate Similarity NPC204407
0.8273 Intermediate Similarity NPC167383
0.8273 Intermediate Similarity NPC57362
0.8252 Intermediate Similarity NPC240617
0.8246 Intermediate Similarity NPC156651
0.8241 Intermediate Similarity NPC475036
0.823 Intermediate Similarity NPC164389
0.823 Intermediate Similarity NPC474557
0.823 Intermediate Similarity NPC220293
0.823 Intermediate Similarity NPC475486
0.823 Intermediate Similarity NPC243354
0.8224 Intermediate Similarity NPC296879
0.8224 Intermediate Similarity NPC471119
0.8224 Intermediate Similarity NPC475558
0.8224 Intermediate Similarity NPC473788
0.8214 Intermediate Similarity NPC65590
0.8214 Intermediate Similarity NPC161434
0.8214 Intermediate Similarity NPC128925
0.8214 Intermediate Similarity NPC100383
0.8214 Intermediate Similarity NPC256798
0.8214 Intermediate Similarity NPC116794
0.8214 Intermediate Similarity NPC125923
0.8214 Intermediate Similarity NPC470063
0.8214 Intermediate Similarity NPC195132
0.8214 Intermediate Similarity NPC212968
0.8214 Intermediate Similarity NPC64106
0.8205 Intermediate Similarity NPC156789
0.8198 Intermediate Similarity NPC110139
0.8198 Intermediate Similarity NPC474589
0.8198 Intermediate Similarity NPC279554
0.8198 Intermediate Similarity NPC475296
0.8198 Intermediate Similarity NPC29069
0.8198 Intermediate Similarity NPC78046
0.8198 Intermediate Similarity NPC56713
0.8198 Intermediate Similarity NPC136877
0.8198 Intermediate Similarity NPC75747
0.8198 Intermediate Similarity NPC90856
0.8198 Intermediate Similarity NPC269095
0.8198 Intermediate Similarity NPC5284
0.8198 Intermediate Similarity NPC7870
0.8198 Intermediate Similarity NPC476881
0.8198 Intermediate Similarity NPC59804
0.8198 Intermediate Similarity NPC474567
0.8198 Intermediate Similarity NPC476884
0.8198 Intermediate Similarity NPC68419
0.8198 Intermediate Similarity NPC174679
0.8198 Intermediate Similarity NPC476887
0.8198 Intermediate Similarity NPC476882
0.8198 Intermediate Similarity NPC199457
0.8198 Intermediate Similarity NPC102914
0.8198 Intermediate Similarity NPC108709
0.8198 Intermediate Similarity NPC127056
0.8198 Intermediate Similarity NPC476880
0.8198 Intermediate Similarity NPC164194
0.8198 Intermediate Similarity NPC476886
0.8198 Intermediate Similarity NPC476883
0.8198 Intermediate Similarity NPC476885
0.8198 Intermediate Similarity NPC270667
0.8198 Intermediate Similarity NPC220984
0.819 Intermediate Similarity NPC473645
0.819 Intermediate Similarity NPC472075
0.819 Intermediate Similarity NPC267694
0.819 Intermediate Similarity NPC144644
0.819 Intermediate Similarity NPC142151
0.819 Intermediate Similarity NPC472076
0.819 Intermediate Similarity NPC153673
0.819 Intermediate Similarity NPC110385
0.819 Intermediate Similarity NPC241192
0.819 Intermediate Similarity NPC37860
0.8182 Intermediate Similarity NPC88744
0.8182 Intermediate Similarity NPC284807
0.8182 Intermediate Similarity NPC224414
0.8182 Intermediate Similarity NPC38217
0.8182 Intermediate Similarity NPC472988
0.8182 Intermediate Similarity NPC28198
0.8182 Intermediate Similarity NPC285576
0.8182 Intermediate Similarity NPC177246
0.8182 Intermediate Similarity NPC476123
0.8174 Intermediate Similarity NPC86020
0.8174 Intermediate Similarity NPC105800
0.8174 Intermediate Similarity NPC204552
0.8174 Intermediate Similarity NPC188667
0.8174 Intermediate Similarity NPC232237
0.8174 Intermediate Similarity NPC475632
0.8173 Intermediate Similarity NPC279974
0.8165 Intermediate Similarity NPC475494
0.8165 Intermediate Similarity NPC477877

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC250956 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.7946 Intermediate Similarity NPD8132 Clinical (unspecified phase)
0.7931 Intermediate Similarity NPD8295 Clinical (unspecified phase)
0.7805 Intermediate Similarity NPD7319 Approved
0.7731 Intermediate Similarity NPD6319 Approved
0.7705 Intermediate Similarity NPD7507 Approved
0.7699 Intermediate Similarity NPD6686 Approved
0.7686 Intermediate Similarity NPD8328 Phase 3
0.7672 Intermediate Similarity NPD8133 Approved
0.7642 Intermediate Similarity NPD8293 Discontinued
0.7623 Intermediate Similarity NPD7492 Approved
0.7611 Intermediate Similarity NPD6412 Phase 2
0.7586 Intermediate Similarity NPD8297 Approved
0.7583 Intermediate Similarity NPD6059 Approved
0.7583 Intermediate Similarity NPD6054 Approved
0.7581 Intermediate Similarity NPD7736 Approved
0.7561 Intermediate Similarity NPD6616 Approved
0.7544 Intermediate Similarity NPD5345 Clinical (unspecified phase)
0.7521 Intermediate Similarity NPD8033 Approved
0.75 Intermediate Similarity NPD7078 Approved
0.7479 Intermediate Similarity NPD7115 Discovery
0.7477 Intermediate Similarity NPD6399 Phase 3
0.7459 Intermediate Similarity NPD6370 Approved
0.7438 Intermediate Similarity NPD8377 Approved
0.7438 Intermediate Similarity NPD8294 Approved
0.7436 Intermediate Similarity NPD6882 Approved
0.7417 Intermediate Similarity NPD7328 Approved
0.7417 Intermediate Similarity NPD7327 Approved
0.7377 Intermediate Similarity NPD6015 Approved
0.7377 Intermediate Similarity NPD8378 Approved
0.7377 Intermediate Similarity NPD8380 Approved
0.7377 Intermediate Similarity NPD8335 Approved
0.7377 Intermediate Similarity NPD8379 Approved
0.7377 Intermediate Similarity NPD6016 Approved
0.7377 Intermediate Similarity NPD8296 Approved
0.7373 Intermediate Similarity NPD4632 Approved
0.7368 Intermediate Similarity NPD6402 Approved
0.7368 Intermediate Similarity NPD7128 Approved
0.7368 Intermediate Similarity NPD5739 Approved
0.7368 Intermediate Similarity NPD6675 Approved
0.7355 Intermediate Similarity NPD7516 Approved
0.7333 Intermediate Similarity NPD6009 Approved
0.7328 Intermediate Similarity NPD4061 Clinical (unspecified phase)
0.7328 Intermediate Similarity NPD6372 Approved
0.7328 Intermediate Similarity NPD6373 Approved
0.7317 Intermediate Similarity NPD5988 Approved
0.7297 Intermediate Similarity NPD7638 Approved
0.7241 Intermediate Similarity NPD7320 Approved
0.7241 Intermediate Similarity NPD6899 Approved
0.7241 Intermediate Similarity NPD6881 Approved
0.7236 Intermediate Similarity NPD8515 Approved
0.7236 Intermediate Similarity NPD8517 Approved
0.7236 Intermediate Similarity NPD8516 Approved
0.7236 Intermediate Similarity NPD8513 Phase 3
0.7232 Intermediate Similarity NPD7640 Approved
0.7232 Intermediate Similarity NPD7639 Approved
0.7222 Intermediate Similarity NPD8034 Phase 2
0.7222 Intermediate Similarity NPD8035 Phase 2
0.7203 Intermediate Similarity NPD8130 Phase 1
0.7203 Intermediate Similarity NPD6649 Approved
0.7203 Intermediate Similarity NPD6650 Approved
0.7155 Intermediate Similarity NPD5697 Approved
0.7155 Intermediate Similarity NPD5701 Approved
0.7143 Intermediate Similarity NPD4225 Approved
0.7119 Intermediate Similarity NPD5955 Clinical (unspecified phase)
0.7119 Intermediate Similarity NPD7290 Approved
0.7119 Intermediate Similarity NPD4634 Approved
0.7119 Intermediate Similarity NPD6883 Approved
0.7119 Intermediate Similarity NPD7102 Approved
0.7097 Intermediate Similarity NPD7503 Approved
0.7091 Intermediate Similarity NPD7748 Approved
0.7069 Intermediate Similarity NPD6008 Approved
0.7064 Intermediate Similarity NPD6411 Approved
0.7059 Intermediate Similarity NPD6869 Approved
0.7059 Intermediate Similarity NPD6617 Approved
0.7059 Intermediate Similarity NPD6847 Approved
0.7054 Intermediate Similarity NPD6084 Phase 2
0.7054 Intermediate Similarity NPD6083 Phase 2
0.7054 Intermediate Similarity NPD7902 Approved
0.7048 Intermediate Similarity NPD4786 Approved
0.7034 Intermediate Similarity NPD6013 Approved
0.7034 Intermediate Similarity NPD6012 Approved
0.7034 Intermediate Similarity NPD6014 Approved
0.7031 Intermediate Similarity NPD6033 Approved
0.7009 Intermediate Similarity NPD7899 Clinical (unspecified phase)
0.6984 Remote Similarity NPD7604 Phase 2
0.6981 Remote Similarity NPD7520 Clinical (unspecified phase)
0.6975 Remote Similarity NPD6371 Approved
0.696 Remote Similarity NPD6921 Approved
0.696 Remote Similarity NPD5983 Phase 2
0.6953 Remote Similarity NPD8074 Phase 3
0.6949 Remote Similarity NPD6011 Approved
0.6917 Remote Similarity NPD6401 Clinical (unspecified phase)
0.6917 Remote Similarity NPD8413 Clinical (unspecified phase)
0.6909 Remote Similarity NPD7515 Phase 2
0.6909 Remote Similarity NPD7983 Approved
0.6909 Remote Similarity NPD7637 Suspended
0.6903 Remote Similarity NPD4755 Approved
0.6881 Remote Similarity NPD5328 Approved
0.6881 Remote Similarity NPD5764 Clinical (unspecified phase)
0.6881 Remote Similarity NPD6101 Approved
0.6875 Remote Similarity NPD6336 Discontinued
0.6864 Remote Similarity NPD5954 Clinical (unspecified phase)
0.686 Remote Similarity NPD6053 Discontinued
0.6857 Remote Similarity NPD3667 Approved
0.6847 Remote Similarity NPD4202 Approved
0.6838 Remote Similarity NPD8170 Clinical (unspecified phase)
0.6827 Remote Similarity NPD7525 Registered
0.6818 Remote Similarity NPD6698 Approved
0.6818 Remote Similarity NPD46 Approved
0.681 Remote Similarity NPD7632 Discontinued
0.6796 Remote Similarity NPD6114 Approved
0.6796 Remote Similarity NPD6115 Approved
0.6796 Remote Similarity NPD6118 Approved
0.6796 Remote Similarity NPD6697 Approved
0.6786 Remote Similarity NPD7901 Clinical (unspecified phase)
0.6786 Remote Similarity NPD7900 Approved
0.6783 Remote Similarity NPD4700 Approved
0.6783 Remote Similarity NPD4696 Approved
0.6783 Remote Similarity NPD5285 Approved
0.6783 Remote Similarity NPD5286 Approved
0.6759 Remote Similarity NPD3618 Phase 1
0.6757 Remote Similarity NPD6079 Approved
0.6726 Remote Similarity NPD5695 Phase 3
0.6719 Remote Similarity NPD6067 Discontinued
0.6699 Remote Similarity NPD6116 Phase 1
0.6697 Remote Similarity NPD7524 Approved
0.6696 Remote Similarity NPD5696 Approved
0.6696 Remote Similarity NPD5779 Approved
0.6696 Remote Similarity NPD5778 Approved
0.6694 Remote Similarity NPD6274 Approved
0.6667 Remote Similarity NPD7100 Approved
0.6667 Remote Similarity NPD5225 Approved
0.6667 Remote Similarity NPD5224 Approved
0.6667 Remote Similarity NPD5211 Phase 2
0.6667 Remote Similarity NPD4633 Approved
0.6667 Remote Similarity NPD5226 Approved
0.6667 Remote Similarity NPD7101 Approved
0.6639 Remote Similarity NPD4767 Approved
0.6639 Remote Similarity NPD4768 Approved
0.6637 Remote Similarity NPD5282 Discontinued
0.6636 Remote Similarity NPD5737 Approved
0.6636 Remote Similarity NPD6672 Approved
0.661 Remote Similarity NPD5175 Approved
0.661 Remote Similarity NPD5174 Approved
0.6606 Remote Similarity NPD7334 Approved
0.6606 Remote Similarity NPD6684 Approved
0.6606 Remote Similarity NPD6409 Approved
0.6606 Remote Similarity NPD5330 Approved
0.6606 Remote Similarity NPD3574 Clinical (unspecified phase)
0.6606 Remote Similarity NPD7146 Approved
0.6606 Remote Similarity NPD7521 Approved
0.6602 Remote Similarity NPD6117 Approved
0.6587 Remote Similarity NPD6335 Approved
0.6581 Remote Similarity NPD5223 Approved
0.6579 Remote Similarity NPD6356 Clinical (unspecified phase)
0.6577 Remote Similarity NPD4753 Phase 2
0.6574 Remote Similarity NPD7338 Clinical (unspecified phase)
0.6562 Remote Similarity NPD6908 Approved
0.6562 Remote Similarity NPD6909 Approved
0.6555 Remote Similarity NPD5141 Approved
0.6541 Remote Similarity NPD5956 Approved
0.6529 Remote Similarity NPD4730 Approved
0.6529 Remote Similarity NPD4729 Approved
0.6522 Remote Similarity NPD5220 Clinical (unspecified phase)
0.6522 Remote Similarity NPD5221 Approved
0.6522 Remote Similarity NPD5222 Approved
0.6522 Remote Similarity NPD4697 Phase 3
0.6522 Remote Similarity NPD7839 Suspended
0.6508 Remote Similarity NPD6317 Approved
0.6508 Remote Similarity NPD8137 Clinical (unspecified phase)
0.6486 Remote Similarity NPD6903 Approved
0.6486 Remote Similarity NPD7513 Clinical (unspecified phase)
0.6481 Remote Similarity NPD6695 Phase 3
0.6481 Remote Similarity NPD3670 Clinical (unspecified phase)
0.6481 Remote Similarity NPD3669 Approved
0.6471 Remote Similarity NPD4754 Approved
0.6466 Remote Similarity NPD5173 Approved
0.6457 Remote Similarity NPD6314 Approved
0.6457 Remote Similarity NPD6313 Approved
0.6455 Remote Similarity NPD6098 Approved
0.6441 Remote Similarity NPD5344 Discontinued
0.6429 Remote Similarity NPD6904 Approved
0.6429 Remote Similarity NPD6673 Approved
0.6429 Remote Similarity NPD6868 Approved
0.6429 Remote Similarity NPD6080 Approved
0.6423 Remote Similarity NPD5250 Approved
0.6423 Remote Similarity NPD5249 Phase 3
0.6423 Remote Similarity NPD5247 Approved
0.6423 Remote Similarity NPD5248 Approved
0.6423 Remote Similarity NPD5251 Approved
0.6422 Remote Similarity NPD3668 Phase 3
0.6422 Remote Similarity NPD3665 Phase 1
0.6422 Remote Similarity NPD3666 Approved
0.6422 Remote Similarity NPD3133 Approved
0.641 Remote Similarity NPD8029 Clinical (unspecified phase)
0.6408 Remote Similarity NPD6113 Clinical (unspecified phase)
0.6404 Remote Similarity NPD8171 Discontinued
0.6396 Remote Similarity NPD7750 Discontinued
0.6396 Remote Similarity NPD3573 Approved
0.6393 Remote Similarity NPD5128 Approved

Structure

External Identifiers

PubChem CID   71726327
ChEMBL   CHEMBL2392316
ZINC  

Physicochemical Properties

Molecular Weight:  620.36
ALogP:  0.7897
MLogP:  4.1
XLogP:  4.649
# Rotatable Bonds:  18
Polar Surface Area:  148.82
# H-Bond Aceptor:  10
# H-Bond Donor:  3
# Rings:  5
# Heavy Atoms:  44

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
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Biological Activities  
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