Natural Product: NPC9248

Natural Product ID:  NPC9248
Common Name:   Pyrocatechol-O-Beta-D-Glucopyranoside
IUPAC Name:   (2R,3S,4S,5R,6S)-2-(hydroxymethyl)-6-(2-hydroxyphenoxy)oxane-3,4,5-triol
Synonyms:  
Molecular Formula:   C12H16O7
Standard InCHIKey:  NMZWIAATAZXMRV-RMPHRYRLSA-N
Standard InCHI:  InChI=1S/C12H16O7/c13-5-8-9(15)10(16)11(17)12(19-8)18-7-4-2-1-3-6(7)14/h1-4,8-17H,5H2/t8-,9-,10+,11-,12-/m1/s1
Canonical SMILES:  OC[C@H]1O[C@@H](Oc2ccccc2O)[C@@H]([C@H]([C@@H]1O)O)O
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO9317 Itoa orientalis Species Salicaceae Eukaryota bark, twigs, and leaves PMID[18412396]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT31 Individual Protein Cyclooxygenase-2 Homo sapiens Inhibition = 40 % PubChem BioAssay data set

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC9248 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9381 High Similarity NPC228907
0.9369 High Similarity NPC142319
0.9316 High Similarity NPC221090
0.9231 High Similarity NPC192810
0.9145 High Similarity NPC152722
0.9083 High Similarity NPC37074
0.9 High Similarity NPC298845
0.9 High Similarity NPC189589
0.9 High Similarity NPC469622
0.8974 High Similarity NPC276195
0.8833 High Similarity NPC25817
0.879 High Similarity NPC166168
0.879 High Similarity NPC287780
0.877 High Similarity NPC469621
0.875 High Similarity NPC217854
0.8739 High Similarity NPC57751
0.871 High Similarity NPC60756
0.871 High Similarity NPC208769
0.8655 High Similarity NPC269242
0.8651 High Similarity NPC60982
0.8629 High Similarity NPC307110
0.8629 High Similarity NPC248355
0.8629 High Similarity NPC166040
0.8583 High Similarity NPC226712
0.8583 High Similarity NPC87696
0.8571 High Similarity NPC60589
0.8571 High Similarity NPC469708
0.8548 High Similarity NPC247146
0.8548 High Similarity NPC302378
0.8537 High Similarity NPC171533
0.85 High Similarity NPC198734
0.85 High Similarity NPC469412
0.8492 Intermediate Similarity NPC65942
0.8492 Intermediate Similarity NPC248307
0.848 Intermediate Similarity NPC26653
0.848 Intermediate Similarity NPC270849
0.845 Intermediate Similarity NPC186418
0.844 Intermediate Similarity NPC314803
0.8425 Intermediate Similarity NPC252833
0.8413 Intermediate Similarity NPC472024
0.8413 Intermediate Similarity NPC80600
0.8387 Intermediate Similarity NPC233559
0.8385 Intermediate Similarity NPC470413
0.8385 Intermediate Similarity NPC138738
0.8385 Intermediate Similarity NPC65530
0.8385 Intermediate Similarity NPC59324
0.8359 Intermediate Similarity NPC49074
0.8359 Intermediate Similarity NPC25821
0.8359 Intermediate Similarity NPC132895
0.8359 Intermediate Similarity NPC6836
0.8346 Intermediate Similarity NPC9912
0.8321 Intermediate Similarity NPC100389
0.8321 Intermediate Similarity NPC98777
0.8321 Intermediate Similarity NPC212770
0.832 Intermediate Similarity NPC140750
0.8308 Intermediate Similarity NPC242028
0.8308 Intermediate Similarity NPC203230
0.8306 Intermediate Similarity NPC12308
0.8306 Intermediate Similarity NPC470510
0.8295 Intermediate Similarity NPC470881
0.8295 Intermediate Similarity NPC35731
0.8281 Intermediate Similarity NPC162093
0.8281 Intermediate Similarity NPC299144
0.8281 Intermediate Similarity NPC470270
0.8258 Intermediate Similarity NPC202700
0.8258 Intermediate Similarity NPC106944
0.8254 Intermediate Similarity NPC198487
0.8254 Intermediate Similarity NPC40377
0.8235 Intermediate Similarity NPC175771
0.8226 Intermediate Similarity NPC287429
0.822 Intermediate Similarity NPC313193
0.8195 Intermediate Similarity NPC469661
0.8189 Intermediate Similarity NPC218003
0.8189 Intermediate Similarity NPC97326
0.8168 Intermediate Similarity NPC104167
0.8168 Intermediate Similarity NPC199459
0.8168 Intermediate Similarity NPC37468
0.8168 Intermediate Similarity NPC164857
0.8168 Intermediate Similarity NPC52277
0.8168 Intermediate Similarity NPC177035
0.8168 Intermediate Similarity NPC157554
0.8154 Intermediate Similarity NPC187194
0.8154 Intermediate Similarity NPC107478
0.8154 Intermediate Similarity NPC476411
0.8154 Intermediate Similarity NPC13745
0.8154 Intermediate Similarity NPC251981
0.8154 Intermediate Similarity NPC48863
0.8134 Intermediate Similarity NPC475084
0.8134 Intermediate Similarity NPC469559
0.8134 Intermediate Similarity NPC189115
0.8134 Intermediate Similarity NPC157816
0.8125 Intermediate Similarity NPC470079
0.811 Intermediate Similarity NPC146540
0.811 Intermediate Similarity NPC72529
0.8106 Intermediate Similarity NPC195196
0.8106 Intermediate Similarity NPC304152
0.8092 Intermediate Similarity NPC55040
0.8092 Intermediate Similarity NPC470236
0.8077 Intermediate Similarity NPC69513
0.8077 Intermediate Similarity NPC215833
0.8074 Intermediate Similarity NPC252169
0.8074 Intermediate Similarity NPC478239
0.8074 Intermediate Similarity NPC46092
0.8074 Intermediate Similarity NPC470950
0.8074 Intermediate Similarity NPC185307
0.807 Intermediate Similarity NPC307875
0.8065 Intermediate Similarity NPC476142
0.8062 Intermediate Similarity NPC121376
0.806 Intermediate Similarity NPC186406
0.8047 Intermediate Similarity NPC86030
0.8047 Intermediate Similarity NPC5851
0.8045 Intermediate Similarity NPC226005
0.8034 Intermediate Similarity NPC247871
0.8031 Intermediate Similarity NPC183181
0.8031 Intermediate Similarity NPC118787
0.8031 Intermediate Similarity NPC163332
0.8031 Intermediate Similarity NPC111247
0.8031 Intermediate Similarity NPC292056
0.8031 Intermediate Similarity NPC198798
0.8031 Intermediate Similarity NPC41706
0.8031 Intermediate Similarity NPC319625
0.8031 Intermediate Similarity NPC147821
0.8015 Intermediate Similarity NPC25292
0.8015 Intermediate Similarity NPC283995
0.8015 Intermediate Similarity NPC473045
0.8015 Intermediate Similarity NPC129417
0.8015 Intermediate Similarity NPC470235
0.8015 Intermediate Similarity NPC232228
0.8 Intermediate Similarity NPC476356
0.8 Intermediate Similarity NPC85799
0.8 Intermediate Similarity NPC165686
0.8 Intermediate Similarity NPC26080
0.8 Intermediate Similarity NPC303422
0.7984 Intermediate Similarity NPC470804
0.7984 Intermediate Similarity NPC262606
0.7984 Intermediate Similarity NPC266045
0.797 Intermediate Similarity NPC477797
0.797 Intermediate Similarity NPC477798
0.7956 Intermediate Similarity NPC279298
0.7956 Intermediate Similarity NPC475096
0.7956 Intermediate Similarity NPC476868
0.7956 Intermediate Similarity NPC38041
0.7956 Intermediate Similarity NPC469586
0.7956 Intermediate Similarity NPC18979
0.7956 Intermediate Similarity NPC476866
0.7956 Intermediate Similarity NPC476869
0.7956 Intermediate Similarity NPC476864
0.7956 Intermediate Similarity NPC22150
0.7955 Intermediate Similarity NPC101624
0.7955 Intermediate Similarity NPC184938
0.7953 Intermediate Similarity NPC58607
0.7953 Intermediate Similarity NPC191037
0.7953 Intermediate Similarity NPC178284
0.7941 Intermediate Similarity NPC473044
0.7939 Intermediate Similarity NPC115022
0.7939 Intermediate Similarity NPC294166
0.7931 Intermediate Similarity NPC124712
0.7926 Intermediate Similarity NPC472711
0.7917 Intermediate Similarity NPC157338
0.7909 Intermediate Similarity NPC114325
0.7907 Intermediate Similarity NPC295970
0.7899 Intermediate Similarity NPC112861
0.7899 Intermediate Similarity NPC476865
0.7899 Intermediate Similarity NPC99515
0.7899 Intermediate Similarity NPC125755
0.7899 Intermediate Similarity NPC199928
0.7899 Intermediate Similarity NPC190714
0.7895 Intermediate Similarity NPC25695
0.7895 Intermediate Similarity NPC172818
0.7886 Intermediate Similarity NPC214289
0.7883 Intermediate Similarity NPC469313
0.7883 Intermediate Similarity NPC168579
0.7883 Intermediate Similarity NPC138227
0.7883 Intermediate Similarity NPC476867
0.7883 Intermediate Similarity NPC76176
0.7883 Intermediate Similarity NPC292443
0.7879 Intermediate Similarity NPC130496
0.7879 Intermediate Similarity NPC188555
0.7874 Intermediate Similarity NPC194519
0.7869 Intermediate Similarity NPC76915
0.7869 Intermediate Similarity NPC151617
0.7868 Intermediate Similarity NPC477800
0.7868 Intermediate Similarity NPC477799
0.7868 Intermediate Similarity NPC48309
0.7868 Intermediate Similarity NPC60249
0.7868 Intermediate Similarity NPC477794
0.7868 Intermediate Similarity NPC140502
0.7868 Intermediate Similarity NPC253878
0.7852 Intermediate Similarity NPC210478
0.7845 Intermediate Similarity NPC232654
0.7845 Intermediate Similarity NPC41594
0.7842 Intermediate Similarity NPC275284
0.7842 Intermediate Similarity NPC15956
0.7842 Intermediate Similarity NPC227902
0.7842 Intermediate Similarity NPC114505
0.7842 Intermediate Similarity NPC193473
0.7842 Intermediate Similarity NPC41844
0.7842 Intermediate Similarity NPC213074
0.7842 Intermediate Similarity NPC224674
0.7842 Intermediate Similarity NPC39657

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC9248 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8583 High Similarity NPD1091 Approved
0.8455 Intermediate Similarity NPD291 Approved
0.8261 Intermediate Similarity NPD556 Approved
0.7909 Intermediate Similarity NPD9296 Approved
0.7798 Intermediate Similarity NPD9365 Approved
0.773 Intermediate Similarity NPD1653 Approved
0.7594 Intermediate Similarity NPD1613 Approved
0.7594 Intermediate Similarity NPD1612 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD3027 Phase 3
0.746 Intermediate Similarity NPD1357 Approved
0.7333 Intermediate Similarity NPD9552 Approved
0.7333 Intermediate Similarity NPD290 Approved
0.7302 Intermediate Similarity NPD1408 Clinical (unspecified phase)
0.7293 Intermediate Similarity NPD1529 Clinical (unspecified phase)
0.728 Intermediate Similarity NPD191 Approved
0.7266 Intermediate Similarity NPD7266 Discontinued
0.7218 Intermediate Similarity NPD1530 Clinical (unspecified phase)
0.7194 Intermediate Similarity NPD3454 Phase 3
0.7163 Intermediate Similarity NPD6674 Discontinued
0.7154 Intermediate Similarity NPD3705 Approved
0.7143 Intermediate Similarity NPD521 Clinical (unspecified phase)
0.7143 Intermediate Similarity NPD9295 Approved
0.7107 Intermediate Similarity NPD968 Approved
0.7097 Intermediate Similarity NPD228 Approved
0.7083 Intermediate Similarity NPD9501 Approved
0.7054 Intermediate Similarity NPD1797 Approved
0.7054 Intermediate Similarity NPD1798 Approved
0.6992 Remote Similarity NPD2684 Approved
0.6977 Remote Similarity NPD7533 Approved
0.6977 Remote Similarity NPD7534 Approved
0.6929 Remote Similarity NPD9299 Approved
0.6912 Remote Similarity NPD3537 Clinical (unspecified phase)
0.6905 Remote Similarity NPD7843 Approved
0.6903 Remote Similarity NPD9094 Approved
0.6899 Remote Similarity NPD1102 Approved
0.6899 Remote Similarity NPD1103 Approved
0.6899 Remote Similarity NPD7054 Approved
0.6897 Remote Similarity NPD5058 Phase 3
0.6855 Remote Similarity NPD7472 Approved
0.6855 Remote Similarity NPD7074 Phase 3
0.6846 Remote Similarity NPD1548 Phase 1
0.6835 Remote Similarity NPD3818 Discontinued
0.6818 Remote Similarity NPD915 Approved
0.6791 Remote Similarity NPD4379 Clinical (unspecified phase)
0.6767 Remote Similarity NPD1610 Phase 2
0.6753 Remote Similarity NPD4381 Clinical (unspecified phase)
0.6744 Remote Similarity NPD7157 Approved
0.6728 Remote Similarity NPD4338 Clinical (unspecified phase)
0.6715 Remote Similarity NPD2250 Discontinued
0.6715 Remote Similarity NPD2861 Phase 2
0.6714 Remote Similarity NPD1558 Phase 1
0.6708 Remote Similarity NPD6797 Phase 2
0.669 Remote Similarity NPD4538 Approved
0.669 Remote Similarity NPD4536 Approved
0.669 Remote Similarity NPD4537 Clinical (unspecified phase)
0.669 Remote Similarity NPD1652 Phase 2
0.6667 Remote Similarity NPD1375 Discontinued
0.6667 Remote Similarity NPD4908 Phase 1
0.6667 Remote Similarity NPD2977 Approved
0.6667 Remote Similarity NPD8455 Phase 2
0.6667 Remote Similarity NPD7251 Discontinued
0.6667 Remote Similarity NPD2978 Approved
0.6643 Remote Similarity NPD5960 Phase 3
0.6643 Remote Similarity NPD5588 Approved
0.6642 Remote Similarity NPD5647 Approved
0.6626 Remote Similarity NPD7808 Phase 3
0.6625 Remote Similarity NPD7228 Approved
0.6622 Remote Similarity NPD1774 Approved
0.662 Remote Similarity NPD2223 Approved
0.662 Remote Similarity NPD2224 Approved
0.6615 Remote Similarity NPD6671 Approved
0.6603 Remote Similarity NPD6234 Discontinued
0.6601 Remote Similarity NPD1934 Approved
0.6571 Remote Similarity NPD4907 Clinical (unspecified phase)
0.6569 Remote Similarity NPD3827 Clinical (unspecified phase)
0.6567 Remote Similarity NPD155 Clinical (unspecified phase)
0.6564 Remote Similarity NPD7685 Pre-registration
0.6544 Remote Similarity NPD2983 Phase 2
0.6544 Remote Similarity NPD2982 Phase 2
0.6544 Remote Similarity NPD3685 Discontinued
0.6525 Remote Similarity NPD6233 Phase 2
0.6519 Remote Similarity NPD422 Phase 1
0.651 Remote Similarity NPD6143 Clinical (unspecified phase)
0.6508 Remote Similarity NPD1358 Approved
0.6503 Remote Similarity NPD6653 Approved
0.65 Remote Similarity NPD3180 Approved
0.65 Remote Similarity NPD3179 Approved
0.6496 Remote Similarity NPD8651 Approved
0.6494 Remote Similarity NPD37 Approved
0.6493 Remote Similarity NPD5846 Approved
0.6493 Remote Similarity NPD5126 Approved
0.6493 Remote Similarity NPD6516 Phase 2
0.6493 Remote Similarity NPD5125 Phase 3
0.6484 Remote Similarity NPD2673 Approved
0.6484 Remote Similarity NPD2671 Approved
0.6479 Remote Similarity NPD3620 Phase 2
0.6479 Remote Similarity NPD3619 Clinical (unspecified phase)
0.6475 Remote Similarity NPD5266 Clinical (unspecified phase)
0.6474 Remote Similarity NPD4868 Clinical (unspecified phase)
0.6474 Remote Similarity NPD4967 Phase 2
0.6474 Remote Similarity NPD4966 Approved
0.6474 Remote Similarity NPD4965 Approved
0.6471 Remote Similarity NPD2981 Phase 2
0.6471 Remote Similarity NPD2231 Phase 2
0.6471 Remote Similarity NPD2235 Phase 2
0.6463 Remote Similarity NPD5698 Clinical (unspecified phase)
0.6462 Remote Similarity NPD5283 Phase 1
0.6458 Remote Similarity NPD4978 Clinical (unspecified phase)
0.6458 Remote Similarity NPD7097 Phase 1
0.6454 Remote Similarity NPD6410 Clinical (unspecified phase)
0.6452 Remote Similarity NPD2393 Clinical (unspecified phase)
0.6449 Remote Similarity NPD1049 Clinical (unspecified phase)
0.6449 Remote Similarity NPD9549 Phase 2
0.6449 Remote Similarity NPD2082 Clinical (unspecified phase)
0.6449 Remote Similarity NPD6362 Approved
0.6447 Remote Similarity NPD3687 Approved
0.6447 Remote Similarity NPD3686 Approved
0.6434 Remote Similarity NPD969 Suspended
0.6434 Remote Similarity NPD4340 Discontinued
0.6434 Remote Similarity NPD1933 Approved
0.6423 Remote Similarity NPD4749 Approved
0.6419 Remote Similarity NPD4628 Phase 3
0.6415 Remote Similarity NPD7199 Phase 2
0.6414 Remote Similarity NPD7033 Discontinued
0.6408 Remote Similarity NPD1726 Clinical (unspecified phase)
0.6398 Remote Similarity NPD6167 Clinical (unspecified phase)
0.6398 Remote Similarity NPD6168 Clinical (unspecified phase)
0.6398 Remote Similarity NPD6166 Phase 2
0.6385 Remote Similarity NPD821 Approved
0.638 Remote Similarity NPD7804 Clinical (unspecified phase)
0.6376 Remote Similarity NPD6190 Approved
0.6376 Remote Similarity NPD2677 Approved
0.6372 Remote Similarity NPD9089 Approved
0.637 Remote Similarity NPD1778 Approved
0.6364 Remote Similarity NPD4060 Phase 1
0.6358 Remote Similarity NPD4123 Phase 3
0.6357 Remote Similarity NPD9494 Approved
0.6357 Remote Similarity NPD3018 Phase 2
0.6351 Remote Similarity NPD4236 Phase 3
0.6351 Remote Similarity NPD4237 Approved
0.6351 Remote Similarity NPD3060 Approved
0.6346 Remote Similarity NPD5773 Approved
0.6346 Remote Similarity NPD5772 Approved
0.6346 Remote Similarity NPD2801 Approved
0.6338 Remote Similarity NPD6798 Discontinued
0.6338 Remote Similarity NPD6859 Clinical (unspecified phase)
0.6338 Remote Similarity NPD1048 Approved
0.6327 Remote Similarity NPD5763 Approved
0.6327 Remote Similarity NPD5762 Approved
0.6324 Remote Similarity NPD3496 Discontinued
0.6319 Remote Similarity NPD447 Suspended
0.6319 Remote Similarity NPD5124 Phase 1
0.6319 Remote Similarity NPD5123 Clinical (unspecified phase)
0.6306 Remote Similarity NPD9088 Approved
0.6294 Remote Similarity NPD4062 Phase 3
0.6291 Remote Similarity NPD1511 Approved
0.6286 Remote Similarity NPD558 Phase 2
0.6284 Remote Similarity NPD2424 Discontinued
0.6283 Remote Similarity NPD9093 Approved
0.6282 Remote Similarity NPD3384 Approved
0.6282 Remote Similarity NPD3382 Approved
0.6282 Remote Similarity NPD3383 Approved
0.6277 Remote Similarity NPD1535 Discovery
0.6277 Remote Similarity NPD776 Approved
0.6275 Remote Similarity NPD2122 Discontinued
0.6273 Remote Similarity NPD3787 Discontinued
0.6269 Remote Similarity NPD5536 Phase 2
0.6268 Remote Similarity NPD4625 Phase 3
0.6266 Remote Similarity NPD3882 Suspended
0.6265 Remote Similarity NPD6559 Discontinued
0.626 Remote Similarity NPD769 Approved
0.6259 Remote Similarity NPD3225 Approved
0.6258 Remote Similarity NPD4678 Approved
0.6258 Remote Similarity NPD4675 Approved
0.625 Remote Similarity NPD1754 Clinical (unspecified phase)
0.625 Remote Similarity NPD3536 Discontinued
0.6242 Remote Similarity NPD4162 Approved
0.6242 Remote Similarity NPD5177 Phase 3
0.6239 Remote Similarity NPD9087 Approved
0.6235 Remote Similarity NPD7184 Clinical (unspecified phase)
0.6232 Remote Similarity NPD1481 Phase 2
0.6224 Remote Similarity NPD3144 Approved
0.6224 Remote Similarity NPD3145 Approved
0.6216 Remote Similarity NPD6005 Phase 3
0.6216 Remote Similarity NPD1552 Clinical (unspecified phase)
0.6216 Remote Similarity NPD6002 Phase 3
0.6216 Remote Similarity NPD1550 Clinical (unspecified phase)
0.6216 Remote Similarity NPD6004 Phase 3
0.6216 Remote Similarity NPD6006 Clinical (unspecified phase)
0.6216 Remote Similarity NPD6003 Clinical (unspecified phase)
0.6216 Remote Similarity NPD2029 Clinical (unspecified phase)
0.6214 Remote Similarity NPD1817 Approved
0.6214 Remote Similarity NPD1818 Approved
0.6214 Remote Similarity NPD1820 Approved
0.6214 Remote Similarity NPD1794 Approved
0.6214 Remote Similarity NPD1819 Approved
0.6209 Remote Similarity NPD1512 Approved
0.6207 Remote Similarity NPD6355 Discontinued
0.6207 Remote Similarity NPD230 Phase 1
0.62 Remote Similarity NPD4535 Phase 3

Structure

External Identifiers

PubChem CID   9900144
ChEMBL   CHEMBL443206
ZINC  

Physicochemical Properties

Molecular Weight:  272.09
ALogP:  -2.6675
MLogP:  2.01
XLogP:  -0.238
# Rotatable Bonds:  8
Polar Surface Area:  119.61
# H-Bond Aceptor:  5
# H-Bond Donor:  5
# Rings:  2
# Heavy Atoms:  19

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
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