Natural Product: NPC13745

Natural Product ID:  NPC13745
Common Name:   (-)-(7S,8S)-Threo-1-C-Syringylglycerol 4-O-Beta-D-Glucopyranoside
IUPAC Name:   (2S,3R,4S,5S,6R)-2-[2,6-dimethoxy-4-[(1S,2S)-1,2,3-trihydroxypropyl]phenoxy]-6-(hydroxymethyl)oxane-3,4,5-triol
Synonyms:  
Molecular Formula:   C17H26O11
Standard InCHIKey:  VIKGCVPVRTWXMM-KAUBVSFJSA-N
Standard InCHI:  InChI=1S/C17H26O11/c1-25-9-3-7(12(21)8(20)5-18)4-10(26-2)16(9)28-17-15(24)14(23)13(22)11(6-19)27-17/h3-4,8,11-15,17-24H,5-6H2,1-2H3/t8-,11+,12-,13+,14-,15+,17-/m0/s1
Canonical SMILES:  OC[C@@H]([C@H](c1cc(OC)c(c(c1)OC)O[C@@H]1O[C@H](CO)[C@H]([C@@H]([C@H]1O)O)O)O)O
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO30984 Fraxinus sieboldiana Species Oleaceae Eukaryota Stem barks PMID[17461599]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT179 Cell Line A2780 Homo sapiens IC50 > 5000 nM 20102170
NPT180 Cell Line HCT-8 Homo sapiens IC50 > 5000 nM 9651160
NPT2 Others Unspecified Inhibition = 28.2 % 18077363
NPT81 Cell Line A549 Homo sapiens IC50 > 5000 nM 18077425
NPT1084 Subcellular Liver microsomes Rattus norvegicus IC50 > 10000 nM 19654408

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC13745 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC48863
1.0 High Similarity NPC251981
0.9921 High Similarity NPC69513
0.9921 High Similarity NPC215833
0.9843 High Similarity NPC299144
0.9766 High Similarity NPC49074
0.969 High Similarity NPC107478
0.9688 High Similarity NPC162093
0.9542 High Similarity NPC164857
0.9535 High Similarity NPC470270
0.9531 High Similarity NPC80600
0.9531 High Similarity NPC472024
0.9478 High Similarity NPC189115
0.9478 High Similarity NPC469559
0.9466 High Similarity NPC470236
0.9462 High Similarity NPC132895
0.9453 High Similarity NPC26653
0.9453 High Similarity NPC166040
0.9453 High Similarity NPC270849
0.9453 High Similarity NPC248355
0.9403 High Similarity NPC469661
0.9398 High Similarity NPC212770
0.9398 High Similarity NPC98777
0.9394 High Similarity NPC25695
0.9394 High Similarity NPC172818
0.9394 High Similarity NPC104167
0.9375 High Similarity NPC302378
0.9338 High Similarity NPC25292
0.9338 High Similarity NPC473045
0.9333 High Similarity NPC475084
0.9323 High Similarity NPC65530
0.9323 High Similarity NPC59324
0.9313 High Similarity NPC25821
0.9308 High Similarity NPC248307
0.9308 High Similarity NPC9912
0.9308 High Similarity NPC65942
0.927 High Similarity NPC277867
0.927 High Similarity NPC161700
0.927 High Similarity NPC475096
0.9265 High Similarity NPC473044
0.9248 High Similarity NPC242028
0.9248 High Similarity NPC203230
0.9242 High Similarity NPC187194
0.9231 High Similarity NPC262606
0.9231 High Similarity NPC469614
0.9231 High Similarity NPC469612
0.9203 High Similarity NPC190714
0.9203 High Similarity NPC125755
0.9203 High Similarity NPC99515
0.9191 High Similarity NPC5262
0.9191 High Similarity NPC472714
0.9185 High Similarity NPC210478
0.9179 High Similarity NPC138738
0.9179 High Similarity NPC195196
0.9179 High Similarity NPC470413
0.9167 High Similarity NPC115022
0.9167 High Similarity NPC294166
0.916 High Similarity NPC469625
0.916 High Similarity NPC30043
0.916 High Similarity NPC469613
0.9154 High Similarity NPC222004
0.9154 High Similarity NPC307110
0.9154 High Similarity NPC202582
0.9154 High Similarity NPC470258
0.9154 High Similarity NPC3439
0.9154 High Similarity NPC210623
0.9154 High Similarity NPC218856
0.9154 High Similarity NPC226788
0.9154 High Similarity NPC273295
0.9154 High Similarity NPC285339
0.9154 High Similarity NPC190629
0.9141 High Similarity NPC12308
0.9137 High Similarity NPC227902
0.9137 High Similarity NPC39657
0.9124 High Similarity NPC37793
0.9124 High Similarity NPC252169
0.9098 High Similarity NPC35731
0.9098 High Similarity NPC476411
0.9098 High Similarity NPC470881
0.9098 High Similarity NPC170694
0.9091 High Similarity NPC160991
0.9091 High Similarity NPC184447
0.9091 High Similarity NPC26080
0.9091 High Similarity NPC7903
0.9091 High Similarity NPC85799
0.9091 High Similarity NPC303422
0.9091 High Similarity NPC16208
0.9091 High Similarity NPC165686
0.9091 High Similarity NPC35932
0.9071 High Similarity NPC175976
0.9071 High Similarity NPC248132
0.9071 High Similarity NPC130449
0.907 High Similarity NPC473960
0.9058 High Similarity NPC168579
0.9058 High Similarity NPC472712
0.9058 High Similarity NPC118385
0.9058 High Similarity NPC138227
0.9058 High Similarity NPC469313
0.9058 High Similarity NPC76176
0.9058 High Similarity NPC187774
0.9058 High Similarity NPC472713
0.9058 High Similarity NPC473046
0.9044 High Similarity NPC226547
0.903 High Similarity NPC238243
0.9023 High Similarity NPC6836
0.9015 High Similarity NPC166168
0.9015 High Similarity NPC473412
0.9015 High Similarity NPC475067
0.9015 High Similarity NPC472597
0.9015 High Similarity NPC121376
0.9015 High Similarity NPC469698
0.9007 High Similarity NPC55158
0.9007 High Similarity NPC51328
0.9007 High Similarity NPC286235
0.9007 High Similarity NPC106138
0.9 High Similarity NPC15538
0.9 High Similarity NPC474119
0.9 High Similarity NPC473480
0.8978 High Similarity NPC210192
0.8963 High Similarity NPC37468
0.8963 High Similarity NPC197723
0.8963 High Similarity NPC52277
0.8963 High Similarity NPC138350
0.8963 High Similarity NPC40664
0.8963 High Similarity NPC199459
0.8963 High Similarity NPC165482
0.8963 High Similarity NPC177035
0.8963 High Similarity NPC471719
0.8963 High Similarity NPC3293
0.8955 High Similarity NPC130496
0.8955 High Similarity NPC87696
0.8955 High Similarity NPC188555
0.8955 High Similarity NPC310854
0.8947 High Similarity NPC252833
0.8944 High Similarity NPC472710
0.8944 High Similarity NPC472709
0.8939 High Similarity NPC472338
0.8936 High Similarity NPC270751
0.8936 High Similarity NPC93924
0.8913 High Similarity NPC60249
0.8905 High Similarity NPC106944
0.8897 High Similarity NPC124149
0.8897 High Similarity NPC283949
0.8897 High Similarity NPC304152
0.8897 High Similarity NPC474039
0.8889 High Similarity NPC236522
0.8889 High Similarity NPC234333
0.8889 High Similarity NPC61946
0.8889 High Similarity NPC55040
0.8889 High Similarity NPC260898
0.8889 High Similarity NPC47398
0.8881 High Similarity NPC263064
0.8873 High Similarity NPC95392
0.8873 High Similarity NPC35877
0.8873 High Similarity NPC55715
0.8872 High Similarity NPC470095
0.8872 High Similarity NPC309787
0.8872 High Similarity NPC470096
0.8864 High Similarity NPC218003
0.8849 High Similarity NPC46092
0.8849 High Similarity NPC470950
0.8849 High Similarity NPC81638
0.8849 High Similarity NPC185307
0.8841 High Similarity NPC76871
0.8837 High Similarity NPC220598
0.8837 High Similarity NPC165375
0.8832 High Similarity NPC292487
0.8832 High Similarity NPC100389
0.8824 High Similarity NPC306441
0.8824 High Similarity NPC16435
0.8819 High Similarity NPC21902
0.8815 High Similarity NPC309744
0.8806 High Similarity NPC470752
0.8806 High Similarity NPC201587
0.8806 High Similarity NPC253105
0.8803 High Similarity NPC280945
0.8803 High Similarity NPC96294
0.8803 High Similarity NPC478237
0.8786 High Similarity NPC297342
0.8786 High Similarity NPC470235
0.8786 High Similarity NPC283995
0.8786 High Similarity NPC129417
0.8777 High Similarity NPC476356
0.8777 High Similarity NPC246947
0.8769 High Similarity NPC94276
0.8769 High Similarity NPC109822
0.8768 High Similarity NPC56091
0.8768 High Similarity NPC177868
0.8768 High Similarity NPC46591
0.8759 High Similarity NPC78809
0.8759 High Similarity NPC185908
0.8759 High Similarity NPC150442
0.8759 High Similarity NPC134260
0.8759 High Similarity NPC87777
0.8759 High Similarity NPC262328
0.875 High Similarity NPC112246
0.875 High Similarity NPC213197
0.875 High Similarity NPC121812
0.875 High Similarity NPC473621
0.875 High Similarity NPC185778

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC13745 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8722 High Similarity NPD3027 Phase 3
0.8611 High Similarity NPD1653 Approved
0.8538 High Similarity NPD1091 Approved
0.8529 High Similarity NPD1613 Approved
0.8529 High Similarity NPD1612 Clinical (unspecified phase)
0.8296 Intermediate Similarity NPD1530 Clinical (unspecified phase)
0.8258 Intermediate Similarity NPD3705 Approved
0.8235 Intermediate Similarity NPD1529 Clinical (unspecified phase)
0.8182 Intermediate Similarity NPD6674 Discontinued
0.8042 Intermediate Similarity NPD7266 Discontinued
0.8038 Intermediate Similarity NPD7054 Approved
0.803 Intermediate Similarity NPD1357 Approved
0.8013 Intermediate Similarity NPD37 Approved
0.7987 Intermediate Similarity NPD7074 Phase 3
0.7987 Intermediate Similarity NPD7472 Approved
0.7974 Intermediate Similarity NPD4967 Phase 2
0.7974 Intermediate Similarity NPD4965 Approved
0.7974 Intermediate Similarity NPD4966 Approved
0.7871 Intermediate Similarity NPD6234 Discontinued
0.7868 Intermediate Similarity NPD2983 Phase 2
0.7868 Intermediate Similarity NPD2982 Phase 2
0.7862 Intermediate Similarity NPD7228 Approved
0.7862 Intermediate Similarity NPD3818 Discontinued
0.784 Intermediate Similarity NPD7808 Phase 3
0.7826 Intermediate Similarity NPD6797 Phase 2
0.7794 Intermediate Similarity NPD2981 Phase 2
0.7778 Intermediate Similarity NPD7251 Discontinued
0.7771 Intermediate Similarity NPD7199 Phase 2
0.777 Intermediate Similarity NPD3018 Phase 2
0.773 Intermediate Similarity NPD4338 Clinical (unspecified phase)
0.7714 Intermediate Similarity NPD4908 Phase 1
0.7692 Intermediate Similarity NPD4381 Clinical (unspecified phase)
0.7692 Intermediate Similarity NPD228 Approved
0.7662 Intermediate Similarity NPD1934 Approved
0.7634 Intermediate Similarity NPD7843 Approved
0.7628 Intermediate Similarity NPD4868 Clinical (unspecified phase)
0.7609 Intermediate Similarity NPD4749 Approved
0.7606 Intermediate Similarity NPD6410 Clinical (unspecified phase)
0.7606 Intermediate Similarity NPD4907 Clinical (unspecified phase)
0.7597 Intermediate Similarity NPD2684 Approved
0.7594 Intermediate Similarity NPD7157 Approved
0.7591 Intermediate Similarity NPD1610 Phase 2
0.7568 Intermediate Similarity NPD1652 Phase 2
0.7562 Intermediate Similarity NPD7184 Clinical (unspecified phase)
0.7561 Intermediate Similarity NPD7240 Approved
0.7556 Intermediate Similarity NPD1548 Phase 1
0.7533 Intermediate Similarity NPD5058 Phase 3
0.7516 Intermediate Similarity NPD6168 Clinical (unspecified phase)
0.7516 Intermediate Similarity NPD6167 Clinical (unspecified phase)
0.7516 Intermediate Similarity NPD6166 Phase 2
0.75 Intermediate Similarity NPD6843 Phase 3
0.75 Intermediate Similarity NPD6842 Approved
0.75 Intermediate Similarity NPD6841 Approved
0.75 Intermediate Similarity NPD2393 Clinical (unspecified phase)
0.7468 Intermediate Similarity NPD7975 Clinical (unspecified phase)
0.7455 Intermediate Similarity NPD6559 Discontinued
0.7452 Intermediate Similarity NPD3817 Phase 2
0.7452 Intermediate Similarity NPD6374 Clinical (unspecified phase)
0.7444 Intermediate Similarity NPD5283 Phase 1
0.7432 Intermediate Similarity NPD1375 Discontinued
0.7419 Intermediate Similarity NPD4675 Approved
0.7419 Intermediate Similarity NPD4678 Approved
0.7394 Intermediate Similarity NPD2861 Phase 2
0.7389 Intermediate Similarity NPD2801 Approved
0.7385 Intermediate Similarity NPD290 Approved
0.7378 Intermediate Similarity NPD7804 Clinical (unspecified phase)
0.7368 Intermediate Similarity NPD6143 Clinical (unspecified phase)
0.7361 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.7355 Intermediate Similarity NPD6055 Clinical (unspecified phase)
0.7347 Intermediate Similarity NPD4536 Approved
0.7347 Intermediate Similarity NPD4537 Clinical (unspecified phase)
0.7347 Intermediate Similarity NPD4538 Approved
0.7338 Intermediate Similarity NPD422 Phase 1
0.7338 Intermediate Similarity NPD6980 Clinical (unspecified phase)
0.7333 Intermediate Similarity NPD5698 Clinical (unspecified phase)
0.7329 Intermediate Similarity NPD5123 Clinical (unspecified phase)
0.7329 Intermediate Similarity NPD5124 Phase 1
0.7324 Intermediate Similarity NPD6917 Clinical (unspecified phase)
0.7296 Intermediate Similarity NPD3882 Suspended
0.7292 Intermediate Similarity NPD4625 Phase 3
0.729 Intermediate Similarity NPD3686 Approved
0.729 Intermediate Similarity NPD3687 Approved
0.7278 Intermediate Similarity NPD2977 Approved
0.7278 Intermediate Similarity NPD2978 Approved
0.7278 Intermediate Similarity NPD8455 Phase 2
0.7273 Intermediate Similarity NPD5844 Phase 1
0.7266 Intermediate Similarity NPD291 Approved
0.726 Intermediate Similarity NPD3619 Clinical (unspecified phase)
0.726 Intermediate Similarity NPD3620 Phase 2
0.726 Intermediate Similarity NPD1558 Phase 1
0.7237 Intermediate Similarity NPD2219 Phase 1
0.7237 Intermediate Similarity NPD5307 Clinical (unspecified phase)
0.7234 Intermediate Similarity NPD4379 Clinical (unspecified phase)
0.7219 Intermediate Similarity NPD4236 Phase 3
0.7219 Intermediate Similarity NPD4237 Approved
0.7211 Intermediate Similarity NPD230 Phase 1
0.7206 Intermediate Similarity NPD6671 Approved
0.72 Intermediate Similarity NPD3540 Phase 1
0.7192 Intermediate Similarity NPD1726 Clinical (unspecified phase)
0.7186 Intermediate Similarity NPD7993 Clinical (unspecified phase)
0.7183 Intermediate Similarity NPD8651 Approved
0.7181 Intermediate Similarity NPD5588 Approved
0.7181 Intermediate Similarity NPD5960 Phase 3
0.7178 Intermediate Similarity NPD3787 Discontinued
0.717 Intermediate Similarity NPD5773 Approved
0.717 Intermediate Similarity NPD5772 Approved
0.7162 Intermediate Similarity NPD6653 Approved
0.7143 Intermediate Similarity NPD1774 Approved
0.7143 Intermediate Similarity NPD556 Approved
0.7143 Intermediate Similarity NPD7685 Pre-registration
0.7143 Intermediate Similarity NPD4060 Phase 1
0.7143 Intermediate Similarity NPD1511 Approved
0.7134 Intermediate Similarity NPD4005 Discontinued
0.7133 Intermediate Similarity NPD3539 Phase 1
0.7124 Intermediate Similarity NPD2677 Approved
0.7114 Intermediate Similarity NPD7097 Phase 1
0.7113 Intermediate Similarity NPD3685 Discontinued
0.7105 Intermediate Similarity NPD4162 Approved
0.7105 Intermediate Similarity NPD3060 Approved
0.7097 Intermediate Similarity NPD4123 Phase 3
0.7089 Intermediate Similarity NPD4380 Phase 2
0.7075 Intermediate Similarity NPD6233 Phase 2
0.7063 Intermediate Similarity NPD1465 Phase 2
0.7059 Intermediate Similarity NPD4110 Phase 3
0.7059 Intermediate Similarity NPD4109 Clinical (unspecified phase)
0.7059 Intermediate Similarity NPD4628 Phase 3
0.7051 Intermediate Similarity NPD1512 Approved
0.7051 Intermediate Similarity NPD1940 Clinical (unspecified phase)
0.7042 Intermediate Similarity NPD2231 Phase 2
0.7042 Intermediate Similarity NPD2235 Phase 2
0.7039 Intermediate Similarity NPD2424 Discontinued
0.7037 Intermediate Similarity NPD7075 Discontinued
0.7032 Intermediate Similarity NPD4357 Discontinued
0.7022 Intermediate Similarity NPD7237 Clinical (unspecified phase)
0.7021 Intermediate Similarity NPD3496 Discontinued
0.7019 Intermediate Similarity NPD5402 Approved
0.7013 Intermediate Similarity NPD6190 Approved
0.7006 Intermediate Similarity NPD3751 Discontinued
0.7 Intermediate Similarity NPD6111 Discontinued
0.6993 Remote Similarity NPD5177 Phase 3
0.6986 Remote Similarity NPD5752 Clinical (unspecified phase)
0.698 Remote Similarity NPD5735 Approved
0.6978 Remote Similarity NPD5536 Phase 2
0.6974 Remote Similarity NPD5762 Approved
0.6974 Remote Similarity NPD5763 Approved
0.6957 Remote Similarity NPD7096 Clinical (unspecified phase)
0.6954 Remote Similarity NPD4108 Discontinued
0.6951 Remote Similarity NPD5494 Approved
0.695 Remote Similarity NPD6516 Phase 2
0.695 Remote Similarity NPD5125 Phase 3
0.695 Remote Similarity NPD5846 Approved
0.695 Remote Similarity NPD5126 Approved
0.6948 Remote Similarity NPD6398 Clinical (unspecified phase)
0.6943 Remote Similarity NPD7526 Approved
0.6943 Remote Similarity NPD7527 Clinical (unspecified phase)
0.6943 Remote Similarity NPD52 Approved
0.6939 Remote Similarity NPD3180 Approved
0.6939 Remote Similarity NPD3179 Approved
0.6939 Remote Similarity NPD7095 Approved
0.6923 Remote Similarity NPD7212 Phase 2
0.6923 Remote Similarity NPD7213 Phase 3
0.6923 Remote Similarity NPD6799 Approved
0.6919 Remote Similarity NPD7090 Clinical (unspecified phase)
0.6917 Remote Similarity NPD968 Approved
0.6914 Remote Similarity NPD2563 Approved
0.6914 Remote Similarity NPD2560 Approved
0.6914 Remote Similarity NPD5353 Approved
0.6913 Remote Similarity NPD2238 Phase 2
0.6908 Remote Similarity NPD6099 Approved
0.6908 Remote Similarity NPD6100 Approved
0.6908 Remote Similarity NPD2161 Phase 2
0.6901 Remote Similarity NPD7549 Discontinued
0.6899 Remote Similarity NPD5403 Approved
0.6899 Remote Similarity NPD2122 Discontinued
0.6894 Remote Similarity NPD3384 Approved
0.6894 Remote Similarity NPD6801 Discontinued
0.6894 Remote Similarity NPD3383 Approved
0.6894 Remote Similarity NPD3382 Approved
0.6892 Remote Similarity NPD6798 Discontinued
0.6889 Remote Similarity NPD3022 Approved
0.6889 Remote Similarity NPD3021 Approved
0.6879 Remote Similarity NPD8055 Clinical (unspecified phase)
0.6879 Remote Similarity NPD7447 Phase 1
0.6868 Remote Similarity NPD7680 Approved
0.6867 Remote Similarity NPD6232 Discontinued
0.6867 Remote Similarity NPD6355 Discontinued
0.6867 Remote Similarity NPD447 Suspended
0.6867 Remote Similarity NPD4340 Discontinued
0.6863 Remote Similarity NPD1552 Clinical (unspecified phase)
0.6863 Remote Similarity NPD1550 Clinical (unspecified phase)
0.6861 Remote Similarity NPD821 Approved
0.6859 Remote Similarity NPD7124 Phase 2
0.6857 Remote Similarity NPD1408 Clinical (unspecified phase)
0.6852 Remote Similarity NPD7819 Suspended
0.6849 Remote Similarity NPD6584 Phase 3
0.6846 Remote Similarity NPD4062 Phase 3
0.6846 Remote Similarity NPD2674 Phase 3
0.6839 Remote Similarity NPD4535 Phase 3
0.6839 Remote Similarity NPD6331 Phase 2
0.6839 Remote Similarity NPD1878 Clinical (unspecified phase)

Structure

External Identifiers

PubChem CID   16681231
ChEMBL   CHEMBL227793
ZINC  

Physicochemical Properties

Molecular Weight:  406.15
ALogP:  -3.7809
MLogP:  2.12
XLogP:  -2.527
# Rotatable Bonds:  17
Polar Surface Area:  178.53
# H-Bond Aceptor:  8
# H-Bond Donor:  7
# Rings:  2
# Heavy Atoms:  28

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
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Biological Activities  
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