Natural Product: NPC64425

Natural Product ID:  NPC64425
Common Name:   2''-Acetylapaeonoside
IUPAC Name:   [(2S,3R,4S,5S,6R)-4,5-dihydroxy-2-[5-hydroxy-2-(4-hydroxyphenyl)-4-oxo-7-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-3-yl]oxy-6-(hydroxymethyl)oxan-3-yl] acetate
Synonyms:   2'-Acetylapaeonoside
Molecular Formula:   C29H32O17
Standard InCHIKey:  UNCGSIXTLZAFKK-RXRZWAIISA-N
Standard InCHI:  InChI=1S/C29H32O17/c1-10(32)41-27-23(39)20(36)17(9-31)45-29(27)46-26-21(37)18-14(34)6-13(42-28-24(40)22(38)19(35)16(8-30)44-28)7-15(18)43-25(26)11-2-4-12(33)5-3-11/h2-7,16-17,19-20,22-24,27-31,33-36,38-40H,8-9H2,1H3/t16-,17-,19-,20-,22+,23+,24-,27-,28-,29+/m1/s1
Canonical SMILES:  OC[C@H]1O[C@@H](Oc2cc(O)c3c(c2)oc(c(c3=O)O[C@@H]2O[C@H](CO)[C@H]([C@@H]([C@H]2OC(=O)C)O)O)c2ccc(cc2)O)[C@@H]([C@H]([C@@H]1O)O)O
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO31221 Delphinium staphisagria Species Ranunculaceae Eukaryota Aerial parts PMID[21466157]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT580 Organism Trypanosoma cruzi Trypanosoma cruzi IC50 = 21700 nM 21466157
NPT189 Cell Line Vero Chlorocebus aethiops IC50 = 1000000 nM 21466157
NPT2 Others Unspecified Ratio IC50 = 46.1 21466157
NPT580 Organism Trypanosoma cruzi Trypanosoma cruzi Inhibition = 85 % 21466157
NPT580 Organism Trypanosoma cruzi Trypanosoma cruzi Activity = 77 % 21466157
NPT580 Organism Trypanosoma cruzi Trypanosoma cruzi Activity = 23 % 21466157

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC64425 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9811 High Similarity NPC175429
0.9811 High Similarity NPC277532
0.9811 High Similarity NPC209550
0.9811 High Similarity NPC138990
0.9808 High Similarity NPC240306
0.9808 High Similarity NPC298171
0.975 High Similarity NPC474522
0.9747 High Similarity NPC476470
0.9747 High Similarity NPC221342
0.9747 High Similarity NPC256188
0.9747 High Similarity NPC142142
0.9747 High Similarity NPC477613
0.9747 High Similarity NPC186816
0.9747 High Similarity NPC203145
0.9747 High Similarity NPC32641
0.9747 High Similarity NPC189564
0.9747 High Similarity NPC12013
0.9747 High Similarity NPC11432
0.9744 High Similarity NPC265885
0.9744 High Similarity NPC85707
0.9744 High Similarity NPC101636
0.9744 High Similarity NPC116458
0.9744 High Similarity NPC253788
0.9744 High Similarity NPC170052
0.9744 High Similarity NPC181465
0.9744 High Similarity NPC259957
0.9744 High Similarity NPC163242
0.9744 High Similarity NPC129217
0.9744 High Similarity NPC246943
0.9744 High Similarity NPC476215
0.9744 High Similarity NPC215710
0.9744 High Similarity NPC224530
0.9744 High Similarity NPC139320
0.9744 High Similarity NPC48093
0.9744 High Similarity NPC473438
0.9744 High Similarity NPC173582
0.9744 High Similarity NPC64305
0.9744 High Similarity NPC276377
0.9744 High Similarity NPC159579
0.9744 High Similarity NPC216496
0.9744 High Similarity NPC249281
0.9744 High Similarity NPC135846
0.9744 High Similarity NPC297987
0.9688 High Similarity NPC470712
0.9688 High Similarity NPC164704
0.9684 High Similarity NPC287889
0.9684 High Similarity NPC76831
0.9684 High Similarity NPC292929
0.9684 High Similarity NPC135358
0.9684 High Similarity NPC289667
0.9682 High Similarity NPC27942
0.9679 High Similarity NPC304741
0.9679 High Similarity NPC136761
0.9679 High Similarity NPC471079
0.9679 High Similarity NPC470405
0.9679 High Similarity NPC187379
0.9627 High Similarity NPC470715
0.9627 High Similarity NPC470714
0.9627 High Similarity NPC470716
0.9623 High Similarity NPC68592
0.9623 High Similarity NPC298666
0.9623 High Similarity NPC262222
0.962 High Similarity NPC121703
0.9618 High Similarity NPC282169
0.9615 High Similarity NPC41121
0.9615 High Similarity NPC138811
0.9615 High Similarity NPC473634
0.9615 High Similarity NPC104677
0.9615 High Similarity NPC320283
0.9615 High Similarity NPC22062
0.9615 High Similarity NPC472459
0.9615 High Similarity NPC111929
0.9571 High Similarity NPC89127
0.9571 High Similarity NPC231787
0.9571 High Similarity NPC471669
0.956 High Similarity NPC129264
0.956 High Similarity NPC19240
0.956 High Similarity NPC139060
0.956 High Similarity NPC72016
0.956 High Similarity NPC85751
0.956 High Similarity NPC205824
0.9557 High Similarity NPC475382
0.9557 High Similarity NPC244875
0.9554 High Similarity NPC473623
0.9554 High Similarity NPC153342
0.9551 High Similarity NPC108831
0.9551 High Similarity NPC129827
0.9551 High Similarity NPC473512
0.9551 High Similarity NPC65003
0.9551 High Similarity NPC78263
0.9551 High Similarity NPC133671
0.9551 High Similarity NPC135391
0.9551 High Similarity NPC197304
0.9551 High Similarity NPC77672
0.9551 High Similarity NPC54802
0.9551 High Similarity NPC182634
0.9551 High Similarity NPC44931
0.9512 High Similarity NPC173837
0.9506 High Similarity NPC221288
0.9506 High Similarity NPC11847
0.9506 High Similarity NPC101399
0.9506 High Similarity NPC217822
0.9503 High Similarity NPC5319
0.9497 High Similarity NPC80068
0.9497 High Similarity NPC311850
0.9497 High Similarity NPC473644
0.9494 High Similarity NPC470125
0.9487 High Similarity NPC307938
0.9487 High Similarity NPC295613
0.9487 High Similarity NPC323593
0.9487 High Similarity NPC203500
0.9487 High Similarity NPC473657
0.9451 High Similarity NPC473862
0.9444 High Similarity NPC469344
0.9444 High Similarity NPC188815
0.9444 High Similarity NPC96605
0.9444 High Similarity NPC92815
0.9444 High Similarity NPC280642
0.9444 High Similarity NPC218161
0.9434 High Similarity NPC150164
0.943 High Similarity NPC142860
0.943 High Similarity NPC97285
0.943 High Similarity NPC321478
0.943 High Similarity NPC246469
0.943 High Similarity NPC271270
0.9423 High Similarity NPC27408
0.9423 High Similarity NPC95090
0.939 High Similarity NPC16194
0.939 High Similarity NPC294815
0.939 High Similarity NPC19108
0.939 High Similarity NPC220173
0.939 High Similarity NPC253685
0.939 High Similarity NPC476472
0.939 High Similarity NPC473327
0.9387 High Similarity NPC155877
0.9387 High Similarity NPC203259
0.9387 High Similarity NPC471725
0.9387 High Similarity NPC471748
0.9387 High Similarity NPC176740
0.9387 High Similarity NPC134532
0.9387 High Similarity NPC33054
0.9375 High Similarity NPC124155
0.9375 High Similarity NPC66087
0.9375 High Similarity NPC179198
0.9375 High Similarity NPC257566
0.9375 High Similarity NPC278419
0.9371 High Similarity NPC477628
0.9371 High Similarity NPC303913
0.9371 High Similarity NPC270675
0.9371 High Similarity NPC210961
0.9371 High Similarity NPC472994
0.9371 High Similarity NPC477629
0.9371 High Similarity NPC195685
0.9371 High Similarity NPC473516
0.9363 High Similarity NPC206378
0.9363 High Similarity NPC127406
0.9359 High Similarity NPC143851
0.9359 High Similarity NPC210003
0.9359 High Similarity NPC39360
0.9359 High Similarity NPC83283
0.9359 High Similarity NPC29763
0.9341 High Similarity NPC470449
0.9341 High Similarity NPC470445
0.9341 High Similarity NPC470447
0.9341 High Similarity NPC162394
0.9341 High Similarity NPC156785
0.9341 High Similarity NPC241781
0.9341 High Similarity NPC470446
0.9333 High Similarity NPC292019
0.9333 High Similarity NPC48984
0.9333 High Similarity NPC14187
0.9333 High Similarity NPC202908
0.9333 High Similarity NPC122467
0.9325 High Similarity NPC136042
0.9325 High Similarity NPC199079
0.9325 High Similarity NPC67326
0.9325 High Similarity NPC244776
0.9325 High Similarity NPC210808
0.9325 High Similarity NPC67105
0.9325 High Similarity NPC116864
0.9325 High Similarity NPC254855
0.9325 High Similarity NPC95866
0.9325 High Similarity NPC156869
0.9325 High Similarity NPC29958
0.9325 High Similarity NPC259896
0.9325 High Similarity NPC255157
0.9313 High Similarity NPC190450
0.9313 High Similarity NPC44947
0.9313 High Similarity NPC259834
0.9313 High Similarity NPC472876
0.9313 High Similarity NPC131745
0.9304 High Similarity NPC288084
0.9304 High Similarity NPC43638
0.9304 High Similarity NPC117478
0.9304 High Similarity NPC6985
0.9304 High Similarity NPC60966
0.9299 High Similarity NPC97052
0.9299 High Similarity NPC169248
0.9299 High Similarity NPC26195
0.9299 High Similarity NPC39351

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC64425 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.9503 High Similarity NPD7804 Clinical (unspecified phase)
0.9448 High Similarity NPD7251 Discontinued
0.939 High Similarity NPD7808 Phase 3
0.9387 High Similarity NPD6797 Phase 2
0.9207 High Similarity NPD7472 Approved
0.9182 High Similarity NPD4381 Clinical (unspecified phase)
0.9146 High Similarity NPD7054 Approved
0.9042 High Similarity NPD4338 Clinical (unspecified phase)
0.8976 High Similarity NPD7074 Phase 3
0.8944 High Similarity NPD7075 Discontinued
0.8812 High Similarity NPD6801 Discontinued
0.8758 High Similarity NPD7096 Clinical (unspecified phase)
0.8734 High Similarity NPD5403 Approved
0.8662 High Similarity NPD6799 Approved
0.8623 High Similarity NPD6168 Clinical (unspecified phase)
0.8623 High Similarity NPD6167 Clinical (unspecified phase)
0.8623 High Similarity NPD6166 Phase 2
0.8608 High Similarity NPD5401 Approved
0.8589 High Similarity NPD3817 Phase 2
0.8571 High Similarity NPD4380 Phase 2
0.8521 High Similarity NPD3818 Discontinued
0.8476 Intermediate Similarity NPD5402 Approved
0.8375 Intermediate Similarity NPD4378 Clinical (unspecified phase)
0.8344 Intermediate Similarity NPD6599 Discontinued
0.8324 Intermediate Similarity NPD6559 Discontinued
0.8315 Intermediate Similarity NPD7879 Clinical (unspecified phase)
0.8293 Intermediate Similarity NPD7411 Suspended
0.828 Intermediate Similarity NPD1552 Clinical (unspecified phase)
0.828 Intermediate Similarity NPD1550 Clinical (unspecified phase)
0.8266 Intermediate Similarity NPD7993 Clinical (unspecified phase)
0.8242 Intermediate Similarity NPD1934 Approved
0.8228 Intermediate Similarity NPD1549 Phase 2
0.8193 Intermediate Similarity NPD2393 Clinical (unspecified phase)
0.8144 Intermediate Similarity NPD8443 Clinical (unspecified phase)
0.8125 Intermediate Similarity NPD8312 Approved
0.8125 Intermediate Similarity NPD8313 Approved
0.8098 Intermediate Similarity NPD1512 Approved
0.8095 Intermediate Similarity NPD4868 Clinical (unspecified phase)
0.8095 Intermediate Similarity NPD3882 Suspended
0.8084 Intermediate Similarity NPD8455 Phase 2
0.8084 Intermediate Similarity NPD2801 Approved
0.8084 Intermediate Similarity NPD7819 Suspended
0.8037 Intermediate Similarity NPD7410 Clinical (unspecified phase)
0.7987 Intermediate Similarity NPD2796 Approved
0.7977 Intermediate Similarity NPD7852 Clinical (unspecified phase)
0.7975 Intermediate Similarity NPD1511 Approved
0.7935 Intermediate Similarity NPD8090 Clinical (unspecified phase)
0.7925 Intermediate Similarity NPD1510 Phase 2
0.7907 Intermediate Similarity NPD6959 Discontinued
0.7901 Intermediate Similarity NPD1878 Clinical (unspecified phase)
0.7886 Intermediate Similarity NPD3751 Discontinued
0.7885 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.7872 Intermediate Similarity NPD7435 Discontinued
0.7861 Intermediate Similarity NPD3787 Discontinued
0.7791 Intermediate Similarity NPD3750 Approved
0.7785 Intermediate Similarity NPD1240 Approved
0.7778 Intermediate Similarity NPD7768 Phase 2
0.776 Intermediate Similarity NPD8151 Discontinued
0.7749 Intermediate Similarity NPD7584 Approved
0.7688 Intermediate Similarity NPD1607 Approved
0.7684 Intermediate Similarity NPD7228 Approved
0.7683 Intermediate Similarity NPD4628 Phase 3
0.7679 Intermediate Similarity NPD1653 Approved
0.767 Intermediate Similarity NPD7784 Clinical (unspecified phase)
0.7669 Intermediate Similarity NPD970 Clinical (unspecified phase)
0.7654 Intermediate Similarity NPD1551 Phase 2
0.7644 Intermediate Similarity NPD5494 Approved
0.764 Intermediate Similarity NPD5844 Phase 1
0.763 Intermediate Similarity NPD3749 Approved
0.7629 Intermediate Similarity NPD7874 Approved
0.7629 Intermediate Similarity NPD7875 Clinical (unspecified phase)
0.7627 Intermediate Similarity NPD7473 Discontinued
0.7622 Intermediate Similarity NPD7421 Clinical (unspecified phase)
0.7619 Intermediate Similarity NPD6776 Approved
0.7619 Intermediate Similarity NPD6779 Approved
0.7619 Intermediate Similarity NPD6777 Approved
0.7619 Intermediate Similarity NPD6780 Approved
0.7619 Intermediate Similarity NPD6782 Approved
0.7619 Intermediate Similarity NPD6778 Approved
0.7619 Intermediate Similarity NPD6781 Approved
0.7614 Intermediate Similarity NPD7184 Clinical (unspecified phase)
0.7611 Intermediate Similarity NPD7685 Pre-registration
0.7592 Intermediate Similarity NPD7698 Approved
0.7592 Intermediate Similarity NPD7696 Phase 3
0.7592 Intermediate Similarity NPD7697 Approved
0.759 Intermediate Similarity NPD7782 Clinical (unspecified phase)
0.759 Intermediate Similarity NPD7783 Phase 2
0.7558 Intermediate Similarity NPD1465 Phase 2
0.7557 Intermediate Similarity NPD6232 Discontinued
0.7552 Intermediate Similarity NPD8320 Phase 1
0.7552 Intermediate Similarity NPD8319 Approved
0.7547 Intermediate Similarity NPD6798 Discontinued
0.7532 Intermediate Similarity NPD6832 Phase 2
0.7529 Intermediate Similarity NPD7458 Discontinued
0.7526 Intermediate Similarity NPD7585 Approved
0.7526 Intermediate Similarity NPD7701 Phase 2
0.7516 Intermediate Similarity NPD1933 Approved
0.7515 Intermediate Similarity NPD6980 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD7266 Discontinued
0.75 Intermediate Similarity NPD6233 Phase 2
0.75 Intermediate Similarity NPD7199 Phase 2
0.7486 Intermediate Similarity NPD919 Approved
0.7485 Intermediate Similarity NPD7033 Discontinued
0.7485 Intermediate Similarity NPD3748 Approved
0.7474 Intermediate Similarity NPD7583 Approved
0.7461 Intermediate Similarity NPD7870 Phase 2
0.7461 Intermediate Similarity NPD7871 Phase 2
0.7446 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.7444 Intermediate Similarity NPD7286 Phase 2
0.7421 Intermediate Similarity NPD7699 Phase 2
0.7421 Intermediate Similarity NPD7700 Phase 2
0.7419 Intermediate Similarity NPD8397 Clinical (unspecified phase)
0.7418 Intermediate Similarity NPD7240 Approved
0.7412 Intermediate Similarity NPD920 Approved
0.741 Intermediate Similarity NPD1652 Phase 2
0.7407 Intermediate Similarity NPD6355 Discontinued
0.7405 Intermediate Similarity NPD8434 Phase 2
0.7363 Intermediate Similarity NPD5953 Discontinued
0.7354 Intermediate Similarity NPD6535 Approved
0.7354 Intermediate Similarity NPD6534 Approved
0.7342 Intermediate Similarity NPD1203 Approved
0.7333 Intermediate Similarity NPD2935 Discontinued
0.7323 Intermediate Similarity NPD7801 Approved
0.7321 Intermediate Similarity NPD6190 Approved
0.7312 Intermediate Similarity NPD8150 Discontinued
0.7308 Intermediate Similarity NPD1091 Approved
0.7305 Intermediate Similarity NPD1243 Approved
0.7301 Intermediate Similarity NPD5124 Phase 1
0.7301 Intermediate Similarity NPD5123 Clinical (unspecified phase)
0.7299 Intermediate Similarity NPD37 Approved
0.7294 Intermediate Similarity NPD2533 Approved
0.7294 Intermediate Similarity NPD642 Clinical (unspecified phase)
0.7294 Intermediate Similarity NPD2534 Approved
0.7294 Intermediate Similarity NPD2532 Approved
0.7288 Intermediate Similarity NPD6234 Discontinued
0.7278 Intermediate Similarity NPD643 Clinical (unspecified phase)
0.7273 Intermediate Similarity NPD4967 Phase 2
0.7273 Intermediate Similarity NPD4965 Approved
0.7273 Intermediate Similarity NPD4966 Approved
0.7268 Intermediate Similarity NPD6823 Phase 2
0.7256 Intermediate Similarity NPD6651 Approved
0.7255 Intermediate Similarity NPD8155 Clinical (unspecified phase)
0.7241 Intermediate Similarity NPD7615 Clinical (unspecified phase)
0.7235 Intermediate Similarity NPD6143 Clinical (unspecified phase)
0.7222 Intermediate Similarity NPD2313 Discontinued
0.7222 Intermediate Similarity NPD3268 Approved
0.7212 Intermediate Similarity NPD7097 Phase 1
0.7207 Intermediate Similarity NPD1247 Approved
0.7202 Intermediate Similarity NPD2800 Approved
0.7197 Intermediate Similarity NPD422 Phase 1
0.7193 Intermediate Similarity NPD7004 Clinical (unspecified phase)
0.7189 Intermediate Similarity NPD4419 Clinical (unspecified phase)
0.7178 Intermediate Similarity NPD4062 Phase 3
0.7173 Intermediate Similarity NPD4363 Phase 3
0.7173 Intermediate Similarity NPD4360 Phase 2
0.717 Intermediate Similarity NPD3225 Approved
0.7169 Intermediate Similarity NPD2799 Discontinued
0.7152 Intermediate Similarity NPD9717 Approved
0.7134 Intermediate Similarity NPD1613 Approved
0.7134 Intermediate Similarity NPD1612 Clinical (unspecified phase)
0.7127 Intermediate Similarity NPD3926 Phase 2
0.7126 Intermediate Similarity NPD3226 Approved
0.7125 Intermediate Similarity NPD2797 Approved
0.7118 Intermediate Similarity NPD2354 Approved
0.7118 Intermediate Similarity NPD3887 Approved
0.7099 Intermediate Similarity NPD4908 Phase 1
0.7091 Intermediate Similarity NPD4340 Discontinued
0.7091 Intermediate Similarity NPD230 Phase 1
0.7089 Intermediate Similarity NPD1547 Clinical (unspecified phase)
0.7081 Intermediate Similarity NPD2798 Approved
0.7059 Intermediate Similarity NPD6398 Clinical (unspecified phase)
0.7051 Intermediate Similarity NPD1548 Phase 1
0.7024 Intermediate Similarity NPD6100 Approved
0.7024 Intermediate Similarity NPD6099 Approved
0.7012 Intermediate Similarity NPD4907 Clinical (unspecified phase)
0.7006 Intermediate Similarity NPD6844 Discontinued
0.6988 Remote Similarity NPD1899 Clinical (unspecified phase)
0.6988 Remote Similarity NPD447 Suspended
0.6982 Remote Similarity NPD2346 Discontinued
0.6982 Remote Similarity NPD2344 Approved
0.6964 Remote Similarity NPD4308 Phase 3
0.6961 Remote Similarity NPD7930 Approved
0.6954 Remote Similarity NPD5049 Phase 3
0.6943 Remote Similarity NPD6214 Clinical (unspecified phase)
0.6943 Remote Similarity NPD9545 Approved
0.6943 Remote Similarity NPD6213 Phase 3
0.6943 Remote Similarity NPD6212 Phase 3
0.6939 Remote Similarity NPD7237 Clinical (unspecified phase)
0.6936 Remote Similarity NPD7390 Discontinued
0.6932 Remote Similarity NPD5808 Clinical (unspecified phase)
0.6928 Remote Similarity NPD4060 Phase 1
0.6928 Remote Similarity NPD943 Approved
0.6927 Remote Similarity NPD4288 Approved
0.6914 Remote Similarity NPD3266 Approved
0.6914 Remote Similarity NPD3267 Approved
0.689 Remote Similarity NPD1529 Clinical (unspecified phase)
0.6885 Remote Similarity NPD5711 Approved
0.6885 Remote Similarity NPD5710 Approved
0.6884 Remote Similarity NPD7680 Approved
0.6882 Remote Similarity NPD2353 Approved

Structure

External Identifiers

PubChem CID   52952636
ChEMBL   CHEMBL1774169
ZINC  

Physicochemical Properties

Molecular Weight:  652.16
ALogP:  -5.7996
MLogP:  2.78
XLogP:  -0.617
# Rotatable Bonds:  19
Polar Surface Area:  271.59
# H-Bond Aceptor:  13
# H-Bond Donor:  9
# Rings:  5
# Heavy Atoms:  46

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
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Biological Activities  
Similar NPs/Drugs