Natural Product: NPC97285

Natural Product ID:  NPC97285
Common Name:   Poncirin
IUPAC Name:   (2S)-7-[(2S,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-5-hydroxy-2-(4-methoxyphenyl)-2,3-dihydrochromen-4-one
Synonyms:   Poncirin
Molecular Formula:   C28H34O14
Standard InCHIKey:  NLAWPKPYBMEWIR-SKYQDXIQSA-N
Standard InCHI:  InChI=1S/C28H34O14/c1-11-21(32)23(34)25(36)27(38-11)42-26-24(35)22(33)19(10-29)41-28(26)39-14-7-15(30)20-16(31)9-17(40-18(20)8-14)12-3-5-13(37-2)6-4-12/h3-8,11,17,19,21-30,32-36H,9-10H2,1-2H3/t11-,17-,19+,21-,22+,23+,24-,25+,26+,27-,28+/m0/s1
Canonical SMILES:  OC[C@H]1O[C@@H](Oc2cc3O[C@@H](CC(=O)c3c(c2)O)c2ccc(cc2)OC)[C@@H]([C@H]([C@@H]1O)O)O[C@@H]1O[C@@H](C)[C@@H]([C@H]([C@H]1O)O)O
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO25443 Citrus reticulata Species Rutaceae Eukaryota TM-MC*
NPO19787 Citrus sinensis Species Rutaceae Eukaryota TM-MC*
NPO10082 Citrus unshiu Species Rutaceae Eukaryota TM-MC*
NPO21771 Citrus trifoliata Species Rutaceae Eukaryota TM-MC*
NPO31471 Poncirus trifoliata Species Rutaceae Eukaryota fruit PMID[17666859]
NPO7317 Citrus aurantium Species Rutaceae Eukaryota TM-MC*
NPO27288 Citrus maxima Species Rutaceae Eukaryota TM-MC*
NPO5270 Citrus natsudaidai Species Rutaceae Eukaryota TM-MC*

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT1310 Individual Protein Xanthine dehydrogenase Bos taurus Inhibition = 0 % 3379415

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC97285 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC271270
1.0 High Similarity NPC142860
1.0 High Similarity NPC246469
0.9869 High Similarity NPC190450
0.9803 High Similarity NPC473634
0.9803 High Similarity NPC22062
0.9803 High Similarity NPC138811
0.9801 High Similarity NPC206378
0.974 High Similarity NPC475382
0.9739 High Similarity NPC473623
0.9737 High Similarity NPC473512
0.9737 High Similarity NPC129827
0.9737 High Similarity NPC65003
0.9737 High Similarity NPC44931
0.9735 High Similarity NPC39351
0.9735 High Similarity NPC26195
0.9735 High Similarity NPC169248
0.9735 High Similarity NPC72649
0.9735 High Similarity NPC97052
0.9679 High Similarity NPC70441
0.9677 High Similarity NPC311850
0.9677 High Similarity NPC124155
0.9677 High Similarity NPC473644
0.9677 High Similarity NPC257566
0.9675 High Similarity NPC101636
0.9675 High Similarity NPC303913
0.9671 High Similarity NPC295613
0.9671 High Similarity NPC170475
0.9671 High Similarity NPC473657
0.9669 High Similarity NPC106625
0.9615 High Similarity NPC287889
0.9615 High Similarity NPC135358
0.9613 High Similarity NPC298171
0.9613 High Similarity NPC240306
0.9613 High Similarity NPC44947
0.961 High Similarity NPC153342
0.961 High Similarity NPC187379
0.9605 High Similarity NPC95090
0.9605 High Similarity NPC99233
0.9605 High Similarity NPC27408
0.9603 High Similarity NPC121001
0.9603 High Similarity NPC259182
0.9557 High Similarity NPC293629
0.9557 High Similarity NPC43587
0.9554 High Similarity NPC12013
0.9554 High Similarity NPC189564
0.9554 High Similarity NPC476470
0.9554 High Similarity NPC298666
0.9554 High Similarity NPC32641
0.9554 High Similarity NPC256188
0.9554 High Similarity NPC142142
0.9554 High Similarity NPC11432
0.9554 High Similarity NPC68592
0.9554 High Similarity NPC477613
0.9554 High Similarity NPC186816
0.9554 High Similarity NPC262222
0.9554 High Similarity NPC203145
0.9554 High Similarity NPC221342
0.9548 High Similarity NPC476215
0.9548 High Similarity NPC249281
0.9548 High Similarity NPC116458
0.9548 High Similarity NPC246943
0.9548 High Similarity NPC173582
0.9548 High Similarity NPC253788
0.9548 High Similarity NPC139320
0.9548 High Similarity NPC47923
0.9548 High Similarity NPC276377
0.9548 High Similarity NPC163242
0.9548 High Similarity NPC181465
0.9548 High Similarity NPC215710
0.9548 High Similarity NPC473438
0.9548 High Similarity NPC265885
0.9545 High Similarity NPC308265
0.9545 High Similarity NPC73511
0.9542 High Similarity NPC127406
0.9539 High Similarity NPC210003
0.9539 High Similarity NPC39360
0.9539 High Similarity NPC29763
0.9539 High Similarity NPC83283
0.9539 High Similarity NPC143851
0.9497 High Similarity NPC79056
0.9497 High Similarity NPC44328
0.9497 High Similarity NPC105095
0.9497 High Similarity NPC199079
0.9497 High Similarity NPC177731
0.9497 High Similarity NPC210808
0.949 High Similarity NPC76831
0.949 High Similarity NPC289667
0.949 High Similarity NPC292929
0.9487 High Similarity NPC259834
0.9487 High Similarity NPC244875
0.9487 High Similarity NPC472876
0.9484 High Similarity NPC271479
0.9484 High Similarity NPC200708
0.9484 High Similarity NPC471079
0.9484 High Similarity NPC472320
0.9484 High Similarity NPC136761
0.9484 High Similarity NPC304741
0.9484 High Similarity NPC470405
0.9481 High Similarity NPC313163
0.9481 High Similarity NPC161749
0.9481 High Similarity NPC197896
0.9481 High Similarity NPC108831
0.9481 High Similarity NPC258035
0.9481 High Similarity NPC23817
0.9481 High Similarity NPC6985
0.9481 High Similarity NPC182634
0.9481 High Similarity NPC43638
0.9481 High Similarity NPC156457
0.9481 High Similarity NPC60966
0.9474 High Similarity NPC88484
0.9474 High Similarity NPC259767
0.9437 High Similarity NPC257011
0.9437 High Similarity NPC137871
0.9437 High Similarity NPC288152
0.9437 High Similarity NPC9002
0.9434 High Similarity NPC105283
0.9434 High Similarity NPC5319
0.943 High Similarity NPC64425
0.9423 High Similarity NPC297987
0.9423 High Similarity NPC135846
0.9423 High Similarity NPC170052
0.9423 High Similarity NPC64305
0.9419 High Similarity NPC41121
0.9419 High Similarity NPC472459
0.9419 High Similarity NPC111929
0.9419 High Similarity NPC320283
0.9416 High Similarity NPC203500
0.9416 High Similarity NPC323593
0.9416 High Similarity NPC45165
0.9416 High Similarity NPC307938
0.9363 High Similarity NPC131745
0.9355 High Similarity NPC135391
0.9355 High Similarity NPC133671
0.9355 High Similarity NPC77672
0.9355 High Similarity NPC197304
0.9355 High Similarity NPC78263
0.9355 High Similarity NPC54802
0.9355 High Similarity NPC122809
0.9346 High Similarity NPC166067
0.9342 High Similarity NPC191154
0.9342 High Similarity NPC477240
0.9342 High Similarity NPC213723
0.9342 High Similarity NPC214454
0.9342 High Similarity NPC106025
0.9338 High Similarity NPC199335
0.9321 High Similarity NPC102028
0.9317 High Similarity NPC301683
0.9317 High Similarity NPC267254
0.9313 High Similarity NPC61791
0.9313 High Similarity NPC209296
0.9313 High Similarity NPC195257
0.9308 High Similarity NPC210073
0.9308 High Similarity NPC236934
0.9308 High Similarity NPC5778
0.9308 High Similarity NPC115674
0.9304 High Similarity NPC183672
0.9304 High Similarity NPC66087
0.9304 High Similarity NPC29830
0.9304 High Similarity NPC179198
0.9304 High Similarity NPC278419
0.9299 High Similarity NPC48093
0.9299 High Similarity NPC477629
0.9299 High Similarity NPC270675
0.9299 High Similarity NPC470125
0.9299 High Similarity NPC224530
0.9299 High Similarity NPC129217
0.9299 High Similarity NPC216496
0.9299 High Similarity NPC159579
0.9299 High Similarity NPC195685
0.9299 High Similarity NPC85707
0.9299 High Similarity NPC210961
0.9299 High Similarity NPC472994
0.9299 High Similarity NPC259957
0.9299 High Similarity NPC477628
0.9295 High Similarity NPC43761
0.929 High Similarity NPC265480
0.929 High Similarity NPC261866
0.929 High Similarity NPC149368
0.9286 High Similarity NPC211158
0.9286 High Similarity NPC87304
0.9286 High Similarity NPC78021
0.9286 High Similarity NPC268950
0.9286 High Similarity NPC108706
0.9281 High Similarity NPC134819
0.9281 High Similarity NPC325429
0.9281 High Similarity NPC190217
0.9272 High Similarity NPC23084
0.9259 High Similarity NPC239549
0.9259 High Similarity NPC51774
0.9259 High Similarity NPC236191
0.9259 High Similarity NPC208668
0.9259 High Similarity NPC168789
0.9255 High Similarity NPC209550
0.9255 High Similarity NPC51326
0.9255 High Similarity NPC150767
0.9255 High Similarity NPC293004
0.9255 High Similarity NPC138990
0.9255 High Similarity NPC277532
0.9255 High Similarity NPC175429

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC97285 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.9497 High Similarity NPD7074 Phase 3
0.9481 High Similarity NPD4381 Clinical (unspecified phase)
0.9434 High Similarity NPD7804 Clinical (unspecified phase)
0.9313 High Similarity NPD7054 Approved
0.9255 High Similarity NPD7472 Approved
0.9141 High Similarity NPD7251 Discontinued
0.9085 High Similarity NPD7808 Phase 3
0.908 High Similarity NPD6797 Phase 2
0.8846 High Similarity NPD4380 Phase 2
0.878 High Similarity NPD3818 Discontinued
0.8773 High Similarity NPD6168 Clinical (unspecified phase)
0.8773 High Similarity NPD6167 Clinical (unspecified phase)
0.8773 High Similarity NPD6166 Phase 2
0.875 High Similarity NPD7075 Discontinued
0.8675 High Similarity NPD1552 Clinical (unspecified phase)
0.8675 High Similarity NPD1550 Clinical (unspecified phase)
0.8631 High Similarity NPD4338 Clinical (unspecified phase)
0.8618 High Similarity NPD1549 Phase 2
0.8616 High Similarity NPD1934 Approved
0.8571 High Similarity NPD6559 Discontinued
0.8562 High Similarity NPD2393 Clinical (unspecified phase)
0.8562 High Similarity NPD7096 Clinical (unspecified phase)
0.8509 High Similarity NPD8443 Clinical (unspecified phase)
0.85 High Similarity NPD6801 Discontinued
0.8438 Intermediate Similarity NPD7411 Suspended
0.8408 Intermediate Similarity NPD4378 Clinical (unspecified phase)
0.8344 Intermediate Similarity NPD6799 Approved
0.8302 Intermediate Similarity NPD5403 Approved
0.8291 Intermediate Similarity NPD7410 Clinical (unspecified phase)
0.8253 Intermediate Similarity NPD6959 Discontinued
0.8247 Intermediate Similarity NPD2796 Approved
0.8232 Intermediate Similarity NPD4868 Clinical (unspecified phase)
0.8221 Intermediate Similarity NPD2801 Approved
0.8221 Intermediate Similarity NPD7819 Suspended
0.8182 Intermediate Similarity NPD1510 Phase 2
0.8176 Intermediate Similarity NPD5401 Approved
0.8171 Intermediate Similarity NPD3817 Phase 2
0.8158 Intermediate Similarity NPD1240 Approved
0.815 Intermediate Similarity NPD8312 Approved
0.815 Intermediate Similarity NPD8313 Approved
0.8148 Intermediate Similarity NPD6599 Discontinued
0.8136 Intermediate Similarity NPD7879 Clinical (unspecified phase)
0.8113 Intermediate Similarity NPD1511 Approved
0.811 Intermediate Similarity NPD8455 Phase 2
0.8107 Intermediate Similarity NPD7852 Clinical (unspecified phase)
0.8081 Intermediate Similarity NPD7993 Clinical (unspecified phase)
0.8061 Intermediate Similarity NPD5402 Approved
0.8052 Intermediate Similarity NPD1607 Approved
0.8012 Intermediate Similarity NPD3882 Suspended
0.8012 Intermediate Similarity NPD1512 Approved
0.7976 Intermediate Similarity NPD5494 Approved
0.7957 Intermediate Similarity NPD7584 Approved
0.7908 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.7904 Intermediate Similarity NPD7768 Phase 2
0.7812 Intermediate Similarity NPD4628 Phase 3
0.7812 Intermediate Similarity NPD3750 Approved
0.7812 Intermediate Similarity NPD1878 Clinical (unspecified phase)
0.7803 Intermediate Similarity NPD7228 Approved
0.7803 Intermediate Similarity NPD3751 Discontinued
0.7789 Intermediate Similarity NPD7782 Clinical (unspecified phase)
0.7789 Intermediate Similarity NPD7783 Phase 2
0.7778 Intermediate Similarity NPD8151 Discontinued
0.7778 Intermediate Similarity NPD3787 Discontinued
0.7759 Intermediate Similarity NPD5844 Phase 1
0.7751 Intermediate Similarity NPD3749 Approved
0.775 Intermediate Similarity NPD7421 Clinical (unspecified phase)
0.7746 Intermediate Similarity NPD7473 Discontinued
0.773 Intermediate Similarity NPD6779 Approved
0.773 Intermediate Similarity NPD6780 Approved
0.773 Intermediate Similarity NPD6776 Approved
0.773 Intermediate Similarity NPD6781 Approved
0.773 Intermediate Similarity NPD6778 Approved
0.773 Intermediate Similarity NPD6782 Approved
0.773 Intermediate Similarity NPD6777 Approved
0.7701 Intermediate Similarity NPD7698 Approved
0.7701 Intermediate Similarity NPD7696 Phase 3
0.7701 Intermediate Similarity NPD7435 Discontinued
0.7701 Intermediate Similarity NPD7697 Approved
0.7679 Intermediate Similarity NPD1465 Phase 2
0.7674 Intermediate Similarity NPD6232 Discontinued
0.7673 Intermediate Similarity NPD1551 Phase 2
0.7663 Intermediate Similarity NPD8090 Clinical (unspecified phase)
0.7651 Intermediate Similarity NPD7458 Discontinued
0.7636 Intermediate Similarity NPD6980 Clinical (unspecified phase)
0.7632 Intermediate Similarity NPD7701 Phase 2
0.7616 Intermediate Similarity NPD7199 Phase 2
0.7595 Intermediate Similarity NPD6651 Approved
0.759 Intermediate Similarity NPD1653 Approved
0.7578 Intermediate Similarity NPD970 Clinical (unspecified phase)
0.7566 Intermediate Similarity NPD7871 Phase 2
0.7566 Intermediate Similarity NPD7870 Phase 2
0.7557 Intermediate Similarity NPD7286 Phase 2
0.7553 Intermediate Similarity NPD6823 Phase 2
0.755 Intermediate Similarity NPD1091 Approved
0.7548 Intermediate Similarity NPD6832 Phase 2
0.7539 Intermediate Similarity NPD7585 Approved
0.7532 Intermediate Similarity NPD1933 Approved
0.7531 Intermediate Similarity NPD2800 Approved
0.7528 Intermediate Similarity NPD7685 Pre-registration
0.7527 Intermediate Similarity NPD7699 Phase 2
0.7527 Intermediate Similarity NPD8397 Clinical (unspecified phase)
0.7527 Intermediate Similarity NPD7700 Phase 2
0.7516 Intermediate Similarity NPD7266 Discontinued
0.75 Intermediate Similarity NPD3748 Approved
0.75 Intermediate Similarity NPD7033 Discontinued
0.7487 Intermediate Similarity NPD7583 Approved
0.7474 Intermediate Similarity NPD8319 Approved
0.7474 Intermediate Similarity NPD8320 Phase 1
0.7472 Intermediate Similarity NPD5953 Discontinued
0.7468 Intermediate Similarity NPD1613 Approved
0.7468 Intermediate Similarity NPD1612 Clinical (unspecified phase)
0.7461 Intermediate Similarity NPD7874 Approved
0.7461 Intermediate Similarity NPD7875 Clinical (unspecified phase)
0.7459 Intermediate Similarity NPD6535 Approved
0.7459 Intermediate Similarity NPD6534 Approved
0.7453 Intermediate Similarity NPD2935 Discontinued
0.7436 Intermediate Similarity NPD4908 Phase 1
0.7434 Intermediate Similarity NPD1547 Clinical (unspecified phase)
0.743 Intermediate Similarity NPD7240 Approved
0.7429 Intermediate Similarity NPD7184 Clinical (unspecified phase)
0.7425 Intermediate Similarity NPD920 Approved
0.7423 Intermediate Similarity NPD7801 Approved
0.7412 Intermediate Similarity NPD37 Approved
0.741 Intermediate Similarity NPD2534 Approved
0.741 Intermediate Similarity NPD2532 Approved
0.741 Intermediate Similarity NPD2533 Approved
0.7399 Intermediate Similarity NPD6234 Discontinued
0.7389 Intermediate Similarity NPD4419 Clinical (unspecified phase)
0.7384 Intermediate Similarity NPD4966 Approved
0.7384 Intermediate Similarity NPD4965 Approved
0.7384 Intermediate Similarity NPD4967 Phase 2
0.7366 Intermediate Similarity NPD4360 Phase 2
0.7366 Intermediate Similarity NPD4363 Phase 3
0.7363 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.7355 Intermediate Similarity NPD1203 Approved
0.7353 Intermediate Similarity NPD7615 Clinical (unspecified phase)
0.7349 Intermediate Similarity NPD6143 Clinical (unspecified phase)
0.7346 Intermediate Similarity NPD6099 Approved
0.7346 Intermediate Similarity NPD6100 Approved
0.7342 Intermediate Similarity NPD4907 Clinical (unspecified phase)
0.7342 Intermediate Similarity NPD6798 Discontinued
0.7329 Intermediate Similarity NPD7097 Phase 1
0.7317 Intermediate Similarity NPD1243 Approved
0.7317 Intermediate Similarity NPD1652 Phase 2
0.7312 Intermediate Similarity NPD5123 Clinical (unspecified phase)
0.7312 Intermediate Similarity NPD5124 Phase 1
0.7308 Intermediate Similarity NPD2798 Approved
0.7305 Intermediate Similarity NPD642 Clinical (unspecified phase)
0.7305 Intermediate Similarity NPD7004 Clinical (unspecified phase)
0.7301 Intermediate Similarity NPD2344 Approved
0.7289 Intermediate Similarity NPD643 Clinical (unspecified phase)
0.7288 Intermediate Similarity NPD7784 Clinical (unspecified phase)
0.7284 Intermediate Similarity NPD2799 Discontinued
0.725 Intermediate Similarity NPD943 Approved
0.7246 Intermediate Similarity NPD7390 Discontinued
0.7235 Intermediate Similarity NPD3226 Approved
0.7233 Intermediate Similarity NPD3268 Approved
0.7233 Intermediate Similarity NPD2313 Discontinued
0.7232 Intermediate Similarity NPD3926 Phase 2
0.7228 Intermediate Similarity NPD8150 Discontinued
0.7228 Intermediate Similarity NPD8434 Phase 2
0.7219 Intermediate Similarity NPD6214 Clinical (unspecified phase)
0.7219 Intermediate Similarity NPD6212 Phase 3
0.7219 Intermediate Similarity NPD6213 Phase 3
0.7215 Intermediate Similarity NPD1529 Clinical (unspecified phase)
0.7208 Intermediate Similarity NPD1610 Phase 2
0.7205 Intermediate Similarity NPD6355 Discontinued
0.72 Intermediate Similarity NPD919 Approved
0.7188 Intermediate Similarity NPD6233 Phase 2
0.7171 Intermediate Similarity NPD1548 Phase 1
0.717 Intermediate Similarity NPD3027 Phase 3
0.7169 Intermediate Similarity NPD6398 Clinical (unspecified phase)
0.7161 Intermediate Similarity NPD9717 Approved
0.7152 Intermediate Similarity NPD1530 Clinical (unspecified phase)
0.7134 Intermediate Similarity NPD2797 Approved
0.7126 Intermediate Similarity NPD2309 Approved
0.7119 Intermediate Similarity NPD1247 Approved
0.711 Intermediate Similarity NPD6844 Discontinued
0.7101 Intermediate Similarity NPD4662 Approved
0.7101 Intermediate Similarity NPD4661 Approved
0.7099 Intermediate Similarity NPD230 Phase 1
0.7097 Intermediate Similarity NPD422 Phase 1
0.7094 Intermediate Similarity NPD8155 Clinical (unspecified phase)
0.7091 Intermediate Similarity NPD2346 Discontinued
0.7083 Intermediate Similarity NPD7501 Clinical (unspecified phase)
0.707 Intermediate Similarity NPD3225 Approved
0.705 Intermediate Similarity NPD7930 Approved
0.7048 Intermediate Similarity NPD2424 Discontinued
0.7035 Intermediate Similarity NPD5808 Clinical (unspecified phase)
0.7031 Intermediate Similarity NPD7237 Clinical (unspecified phase)
0.7024 Intermediate Similarity NPD6190 Approved
0.7006 Intermediate Similarity NPD6674 Discontinued
0.7006 Intermediate Similarity NPD2654 Approved
0.6994 Remote Similarity NPD1899 Clinical (unspecified phase)
0.6994 Remote Similarity NPD447 Suspended
0.6983 Remote Similarity NPD5711 Approved
0.6983 Remote Similarity NPD5710 Approved
0.6974 Remote Similarity NPD7680 Approved
0.697 Remote Similarity NPD1509 Clinical (unspecified phase)
0.697 Remote Similarity NPD4308 Phase 3

Structure

External Identifiers

PubChem CID   442456
ChEMBL   CHEMBL451050
ZINC  

Physicochemical Properties

Molecular Weight:  594.19
ALogP:  -4.3997
MLogP:  3
XLogP:  -0.526
# Rotatable Bonds:  16
Polar Surface Area:  214.06
# H-Bond Aceptor:  10
# H-Bond Donor:  7
# Rings:  5
# Heavy Atoms:  42

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs