Natural Product: NPC49297

Natural Product ID:  NPC49297
Common Name:   Gniditrin
IUPAC Name:  
Synonyms:   Gniditrin
Molecular Formula:   C37H42O10
Standard InCHIKey:  NEIGQRKMHFDLTK-FLWUMMFCSA-N
Standard InCHI:  InChI=1S/C37H42O10/c1-6-7-8-9-10-11-15-18-26(39)43-29-23(5)36-25-19-22(4)28(40)34(25,42)32(41)33(20-38)30(44-33)27(36)31-35(29,21(2)3)46-37(45-31,47-36)24-16-13-12-14-17-24/h8-19,23,25,27,29-32,38,41-42H,2,6-7,20H2,1,3-5H3/b9-8+,11-10+,18-15+/t23-,25-,27+,29-,30+,31?,32-,33+,34-,35?,36?,37?/m1/s1
Canonical SMILES:  CCC/C=C/C=C/C=C/C(=O)O[C@@H]1[C@@H](C)C23OC4(OC1(C(=C)C)C([C@@H]2[C@@H]1O[C@@]1([C@H]([C@]1([C@H]3C=C(C1=O)C)O)O)CO)O4)c1ccccc1
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO2035 Daphne aurantiaca Species Thymelaeaceae Eukaryota PMID[20192236]
NPO4035 Daphne odora Species Thymelaeaceae Eukaryota HerDing*
NPO4035 Daphne odora Species Thymelaeaceae Eukaryota TCMID*

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT113 Cell Line RAW264.7 Mus musculus IC50 = 30 nM 20192236
NPT24 Organism Human immunodeficiency virus 1 Human immunodeficiency virus 1 EC50 = 74 nM 22148316
NPT24 Organism Human immunodeficiency virus 1 Human immunodeficiency virus 1 EC50 = 133 nM 22148316

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC49297 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9932 High Similarity NPC181924
0.98 High Similarity NPC275477
0.98 High Similarity NPC477190
0.98 High Similarity NPC477188
0.98 High Similarity NPC43304
0.9728 High Similarity NPC146310
0.9608 High Similarity NPC61891
0.9477 High Similarity NPC66193
0.9477 High Similarity NPC322420
0.9467 High Similarity NPC154675
0.9359 High Similarity NPC40138
0.9272 High Similarity NPC251139
0.9231 High Similarity NPC324769
0.9231 High Similarity NPC325732
0.9167 High Similarity NPC471134
0.8961 High Similarity NPC475548
0.8961 High Similarity NPC475638
0.8961 High Similarity NPC290683
0.8839 High Similarity NPC11410
0.8831 High Similarity NPC471135
0.8808 High Similarity NPC477737
0.8795 High Similarity NPC254588
0.879 High Similarity NPC471138
0.879 High Similarity NPC326328
0.879 High Similarity NPC309991
0.879 High Similarity NPC323356
0.8701 High Similarity NPC471103
0.8701 High Similarity NPC62792
0.8701 High Similarity NPC51602
0.8675 High Similarity NPC471139
0.8662 High Similarity NPC322048
0.8662 High Similarity NPC318447
0.8645 High Similarity NPC138641
0.8645 High Similarity NPC469647
0.8645 High Similarity NPC283875
0.8645 High Similarity NPC469648
0.8645 High Similarity NPC22571
0.8599 High Similarity NPC323001
0.8599 High Similarity NPC326235
0.8599 High Similarity NPC106895
0.859 High Similarity NPC133430
0.859 High Similarity NPC469477
0.8581 High Similarity NPC478123
0.8581 High Similarity NPC298072
0.858 High Similarity NPC186746
0.8562 High Similarity NPC478124
0.8544 High Similarity NPC477735
0.8535 High Similarity NPC282239
0.8535 High Similarity NPC21410
0.8535 High Similarity NPC473670
0.8535 High Similarity NPC472549
0.8526 High Similarity NPC233581
0.8526 High Similarity NPC145649
0.8519 High Similarity NPC477491
0.8516 High Similarity NPC7095
0.8509 High Similarity NPC478073
0.8497 Intermediate Similarity NPC301946
0.8497 Intermediate Similarity NPC277053
0.8497 Intermediate Similarity NPC127857
0.8491 Intermediate Similarity NPC469399
0.8491 Intermediate Similarity NPC477736
0.8477 Intermediate Similarity NPC325078
0.8462 Intermediate Similarity NPC472398
0.8457 Intermediate Similarity NPC471493
0.8452 Intermediate Similarity NPC81698
0.8452 Intermediate Similarity NPC60509
0.8452 Intermediate Similarity NPC250046
0.8447 Intermediate Similarity NPC55744
0.8431 Intermediate Similarity NPC80895
0.8431 Intermediate Similarity NPC471912
0.8428 Intermediate Similarity NPC469417
0.8428 Intermediate Similarity NPC472393
0.8418 Intermediate Similarity NPC26033
0.8418 Intermediate Similarity NPC228204
0.8415 Intermediate Similarity NPC102465
0.8408 Intermediate Similarity NPC477905
0.8408 Intermediate Similarity NPC472548
0.8397 Intermediate Similarity NPC476173
0.8397 Intermediate Similarity NPC198455
0.8397 Intermediate Similarity NPC165260
0.8397 Intermediate Similarity NPC112216
0.8397 Intermediate Similarity NPC161239
0.8395 Intermediate Similarity NPC478125
0.8387 Intermediate Similarity NPC132652
0.8377 Intermediate Similarity NPC471100
0.8377 Intermediate Similarity NPC471107
0.8375 Intermediate Similarity NPC319404
0.8375 Intermediate Similarity NPC471102
0.8365 Intermediate Similarity NPC217091
0.8364 Intermediate Similarity NPC477488
0.8355 Intermediate Similarity NPC77493
0.8354 Intermediate Similarity NPC229545
0.8354 Intermediate Similarity NPC134685
0.8354 Intermediate Similarity NPC472030
0.8354 Intermediate Similarity NPC237549
0.8354 Intermediate Similarity NPC257213
0.8354 Intermediate Similarity NPC256142
0.8354 Intermediate Similarity NPC249471
0.8354 Intermediate Similarity NPC219419
0.8354 Intermediate Similarity NPC304876
0.8354 Intermediate Similarity NPC472005
0.8354 Intermediate Similarity NPC473414
0.8354 Intermediate Similarity NPC265395
0.8354 Intermediate Similarity NPC158333
0.8354 Intermediate Similarity NPC11588
0.8354 Intermediate Similarity NPC472022
0.8354 Intermediate Similarity NPC242262
0.8354 Intermediate Similarity NPC248265
0.8354 Intermediate Similarity NPC1173
0.8344 Intermediate Similarity NPC470153
0.8323 Intermediate Similarity NPC240115
0.8323 Intermediate Similarity NPC312393
0.8302 Intermediate Similarity NPC259144
0.8302 Intermediate Similarity NPC473611
0.8302 Intermediate Similarity NPC469730
0.8302 Intermediate Similarity NPC114410
0.8302 Intermediate Similarity NPC112523
0.8302 Intermediate Similarity NPC132599
0.8302 Intermediate Similarity NPC5115
0.8302 Intermediate Similarity NPC473632
0.8302 Intermediate Similarity NPC114357
0.8302 Intermediate Similarity NPC155329
0.8301 Intermediate Similarity NPC140021
0.8299 Intermediate Similarity NPC182266
0.8299 Intermediate Similarity NPC471137
0.8299 Intermediate Similarity NPC471136
0.8299 Intermediate Similarity NPC473548
0.8299 Intermediate Similarity NPC223356
0.8299 Intermediate Similarity NPC475154
0.8299 Intermediate Similarity NPC100017
0.8299 Intermediate Similarity NPC475500
0.8282 Intermediate Similarity NPC150893
0.8282 Intermediate Similarity NPC295408
0.8282 Intermediate Similarity NPC329960
0.828 Intermediate Similarity NPC254558
0.828 Intermediate Similarity NPC91730
0.828 Intermediate Similarity NPC473214
0.828 Intermediate Similarity NPC470245
0.8253 Intermediate Similarity NPC477471
0.8253 Intermediate Similarity NPC477473
0.8253 Intermediate Similarity NPC477469
0.8253 Intermediate Similarity NPC477466
0.825 Intermediate Similarity NPC70344
0.8247 Intermediate Similarity NPC95449
0.8247 Intermediate Similarity NPC477894
0.8246 Intermediate Similarity NPC93685
0.8246 Intermediate Similarity NPC108191
0.8239 Intermediate Similarity NPC77719
0.8235 Intermediate Similarity NPC27377
0.8235 Intermediate Similarity NPC472576
0.8235 Intermediate Similarity NPC97947
0.8235 Intermediate Similarity NPC41481
0.8235 Intermediate Similarity NPC16912
0.8235 Intermediate Similarity NPC118080
0.8235 Intermediate Similarity NPC291599
0.8235 Intermediate Similarity NPC87448
0.8228 Intermediate Similarity NPC101043
0.8228 Intermediate Similarity NPC197037
0.8228 Intermediate Similarity NPC469415
0.8228 Intermediate Similarity NPC306799
0.8221 Intermediate Similarity NPC475536
0.8221 Intermediate Similarity NPC165234
0.8217 Intermediate Similarity NPC476975
0.8217 Intermediate Similarity NPC473215
0.8214 Intermediate Similarity NPC469421
0.8205 Intermediate Similarity NPC469513
0.8199 Intermediate Similarity NPC469771
0.8194 Intermediate Similarity NPC34943
0.8193 Intermediate Similarity NPC469420
0.8188 Intermediate Similarity NPC68282
0.8187 Intermediate Similarity NPC471176
0.8187 Intermediate Similarity NPC469456
0.8187 Intermediate Similarity NPC469422
0.8187 Intermediate Similarity NPC34066
0.8182 Intermediate Similarity NPC182869
0.8182 Intermediate Similarity NPC183540
0.8171 Intermediate Similarity NPC475437
0.8171 Intermediate Similarity NPC473797
0.8171 Intermediate Similarity NPC475505
0.8171 Intermediate Similarity NPC473641
0.8171 Intermediate Similarity NPC475300
0.8171 Intermediate Similarity NPC475464
0.817 Intermediate Similarity NPC90614
0.817 Intermediate Similarity NPC100913
0.817 Intermediate Similarity NPC171207
0.817 Intermediate Similarity NPC97667
0.817 Intermediate Similarity NPC275592
0.8165 Intermediate Similarity NPC475561
0.8165 Intermediate Similarity NPC222102
0.8165 Intermediate Similarity NPC475417
0.8165 Intermediate Similarity NPC125033
0.8165 Intermediate Similarity NPC303429
0.8163 Intermediate Similarity NPC474508
0.8163 Intermediate Similarity NPC180902
0.8163 Intermediate Similarity NPC473485
0.8163 Intermediate Similarity NPC475139
0.8153 Intermediate Similarity NPC327031
0.8153 Intermediate Similarity NPC217918
0.8148 Intermediate Similarity NPC477467
0.8141 Intermediate Similarity NPC174982

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC49297 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8246 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.8133 Intermediate Similarity NPD7966 Clinical (unspecified phase)
0.8095 Intermediate Similarity NPD7799 Discontinued
0.7977 Intermediate Similarity NPD8407 Phase 2
0.7907 Intermediate Similarity NPD8368 Discontinued
0.7584 Intermediate Similarity NPD8434 Phase 2
0.7578 Intermediate Similarity NPD7236 Approved
0.7529 Intermediate Similarity NPD8470 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD8360 Approved
0.75 Intermediate Similarity NPD8435 Approved
0.75 Intermediate Similarity NPD8361 Approved
0.7455 Intermediate Similarity NPD7239 Suspended
0.7418 Intermediate Similarity NPD7879 Clinical (unspecified phase)
0.7293 Intermediate Similarity NPD8424 Clinical (unspecified phase)
0.7293 Intermediate Similarity NPD8150 Discontinued
0.7273 Intermediate Similarity NPD3751 Discontinued
0.7241 Intermediate Similarity NPD3787 Discontinued
0.7234 Intermediate Similarity NPD8486 Clinical (unspecified phase)
0.7207 Intermediate Similarity NPD7685 Pre-registration
0.7195 Intermediate Similarity NPD6190 Approved
0.7169 Intermediate Similarity NPD8389 Clinical (unspecified phase)
0.7152 Intermediate Similarity NPD5125 Phase 3
0.7152 Intermediate Similarity NPD5126 Approved
0.7151 Intermediate Similarity NPD4965 Approved
0.7151 Intermediate Similarity NPD4967 Phase 2
0.7151 Intermediate Similarity NPD4966 Approved
0.7079 Intermediate Similarity NPD7228 Approved
0.7076 Intermediate Similarity NPD37 Approved
0.7074 Intermediate Similarity NPD8485 Approved
0.7069 Intermediate Similarity NPD6234 Discontinued
0.7052 Intermediate Similarity NPD7057 Phase 3
0.7052 Intermediate Similarity NPD7058 Phase 2
0.7037 Intermediate Similarity NPD7700 Phase 2
0.7037 Intermediate Similarity NPD7699 Phase 2
0.7035 Intermediate Similarity NPD7096 Clinical (unspecified phase)
0.7025 Intermediate Similarity NPD5952 Clinical (unspecified phase)
0.7011 Intermediate Similarity NPD7075 Discontinued
0.7006 Intermediate Similarity NPD7184 Clinical (unspecified phase)
0.7005 Intermediate Similarity NPD8462 Phase 1
0.6995 Remote Similarity NPD8320 Phase 1
0.6995 Remote Similarity NPD8319 Approved
0.6989 Remote Similarity NPD7199 Phase 2
0.6968 Remote Similarity NPD6534 Approved
0.6968 Remote Similarity NPD6535 Approved
0.6944 Remote Similarity NPD7804 Clinical (unspecified phase)
0.6943 Remote Similarity NPD7435 Discontinued
0.694 Remote Similarity NPD8313 Approved
0.694 Remote Similarity NPD8312 Approved
0.6936 Remote Similarity NPD7819 Suspended
0.6923 Remote Similarity NPD7240 Approved
0.6889 Remote Similarity NPD3818 Discontinued
0.6885 Remote Similarity NPD4338 Clinical (unspecified phase)
0.6845 Remote Similarity NPD8397 Clinical (unspecified phase)
0.6835 Remote Similarity NPD6007 Clinical (unspecified phase)
0.6831 Remote Similarity NPD6559 Discontinued
0.6818 Remote Similarity NPD4381 Clinical (unspecified phase)
0.6818 Remote Similarity NPD7875 Clinical (unspecified phase)
0.6818 Remote Similarity NPD7874 Approved
0.6798 Remote Similarity NPD8127 Discontinued
0.6793 Remote Similarity NPD7808 Phase 3
0.6788 Remote Similarity NPD6780 Approved
0.6788 Remote Similarity NPD6777 Approved
0.6788 Remote Similarity NPD6781 Approved
0.6788 Remote Similarity NPD6782 Approved
0.6788 Remote Similarity NPD6776 Approved
0.6788 Remote Similarity NPD6779 Approved
0.6788 Remote Similarity NPD6778 Approved
0.6782 Remote Similarity NPD6801 Discontinued
0.6782 Remote Similarity NPD8404 Phase 2
0.6769 Remote Similarity NPD7698 Approved
0.6769 Remote Similarity NPD7696 Phase 3
0.6769 Remote Similarity NPD7697 Approved
0.6763 Remote Similarity NPD4380 Phase 2
0.6755 Remote Similarity NPD2629 Approved
0.6747 Remote Similarity NPD7266 Discontinued
0.6743 Remote Similarity NPD5761 Phase 2
0.6743 Remote Similarity NPD5760 Phase 2
0.6742 Remote Similarity NPD5494 Approved
0.674 Remote Similarity NPD7473 Discontinued
0.6739 Remote Similarity NPD7251 Discontinued
0.6739 Remote Similarity NPD6765 Approved
0.6739 Remote Similarity NPD6764 Approved
0.6735 Remote Similarity NPD7871 Phase 2
0.6735 Remote Similarity NPD7870 Phase 2
0.6721 Remote Similarity NPD7074 Phase 3
0.6717 Remote Similarity NPD7701 Phase 2
0.6711 Remote Similarity NPD4198 Discontinued
0.6706 Remote Similarity NPD6143 Clinical (unspecified phase)
0.6705 Remote Similarity NPD5402 Approved
0.6705 Remote Similarity NPD3817 Phase 2
0.6701 Remote Similarity NPD7999 Approved
0.67 Remote Similarity NPD7801 Approved
0.6688 Remote Similarity NPD7741 Discontinued
0.6685 Remote Similarity NPD5537 Clinical (unspecified phase)
0.6685 Remote Similarity NPD6797 Phase 2
0.6685 Remote Similarity NPD7993 Clinical (unspecified phase)
0.6683 Remote Similarity NPD7930 Approved
0.6667 Remote Similarity NPD7054 Approved
0.6667 Remote Similarity NPD6599 Discontinued
0.6667 Remote Similarity NPD7319 Approved
0.6667 Remote Similarity NPD5844 Phase 1
0.6648 Remote Similarity NPD8455 Phase 2
0.6647 Remote Similarity NPD5763 Approved
0.6647 Remote Similarity NPD5762 Approved
0.663 Remote Similarity NPD7472 Approved
0.6627 Remote Similarity NPD2575 Approved
0.6627 Remote Similarity NPD8166 Discontinued
0.6627 Remote Similarity NPD4628 Phase 3
0.6626 Remote Similarity NPD7961 Discontinued
0.6624 Remote Similarity NPD7492 Approved
0.6616 Remote Similarity NPD7211 Clinical (unspecified phase)
0.6608 Remote Similarity NPD6799 Approved
0.6604 Remote Similarity NPD7736 Approved
0.6596 Remote Similarity NPD6785 Approved
0.6596 Remote Similarity NPD6784 Approved
0.6593 Remote Similarity NPD6166 Phase 2
0.6593 Remote Similarity NPD6168 Clinical (unspecified phase)
0.6593 Remote Similarity NPD6167 Clinical (unspecified phase)
0.659 Remote Similarity NPD6980 Clinical (unspecified phase)
0.6588 Remote Similarity NPD7274 Clinical (unspecified phase)
0.6582 Remote Similarity NPD6616 Approved
0.6581 Remote Similarity NPD6054 Approved
0.6575 Remote Similarity NPD6232 Discontinued
0.6573 Remote Similarity NPD4868 Clinical (unspecified phase)
0.6573 Remote Similarity NPD3882 Suspended
0.6571 Remote Similarity NPD7028 Phase 2
0.657 Remote Similarity NPD2532 Approved
0.657 Remote Similarity NPD2534 Approved
0.657 Remote Similarity NPD2533 Approved
0.6556 Remote Similarity NPD969 Suspended
0.6554 Remote Similarity NPD2393 Clinical (unspecified phase)
0.6545 Remote Similarity NPD6355 Discontinued
0.6541 Remote Similarity NPD7078 Approved
0.6538 Remote Similarity NPD8515 Approved
0.6538 Remote Similarity NPD8516 Approved
0.6538 Remote Similarity NPD8513 Phase 3
0.6538 Remote Similarity NPD8517 Approved
0.6536 Remote Similarity NPD690 Clinical (unspecified phase)
0.6522 Remote Similarity NPD6085 Phase 2
0.6522 Remote Similarity NPD5740 Clinical (unspecified phase)
0.6517 Remote Similarity NPD8151 Discontinued
0.6517 Remote Similarity NPD8443 Clinical (unspecified phase)
0.6515 Remote Similarity NPD7497 Discontinued
0.6514 Remote Similarity NPD7458 Discontinued
0.6514 Remote Similarity NPD6591 Clinical (unspecified phase)
0.651 Remote Similarity NPD5345 Clinical (unspecified phase)
0.6497 Remote Similarity NPD1934 Approved
0.6497 Remote Similarity NPD6370 Approved
0.6494 Remote Similarity NPD5403 Approved
0.649 Remote Similarity NPD2181 Clinical (unspecified phase)
0.649 Remote Similarity NPD8155 Clinical (unspecified phase)
0.6478 Remote Similarity NPD7507 Approved
0.6477 Remote Similarity NPD6212 Phase 3
0.6477 Remote Similarity NPD6213 Phase 3
0.6477 Remote Similarity NPD6214 Clinical (unspecified phase)
0.6474 Remote Similarity NPD5401 Approved
0.6467 Remote Similarity NPD7097 Phase 1
0.6465 Remote Similarity NPD6823 Phase 2
0.6463 Remote Similarity NPD3764 Approved
0.645 Remote Similarity NPD6006 Clinical (unspecified phase)
0.645 Remote Similarity NPD6004 Phase 3
0.645 Remote Similarity NPD6003 Clinical (unspecified phase)
0.645 Remote Similarity NPD2346 Discontinued
0.645 Remote Similarity NPD6002 Phase 3
0.645 Remote Similarity NPD6005 Phase 3
0.6443 Remote Similarity NPD7899 Clinical (unspecified phase)
0.6441 Remote Similarity NPD7411 Suspended
0.6438 Remote Similarity NPD8293 Discontinued
0.6437 Remote Similarity NPD7314 Clinical (unspecified phase)
0.6433 Remote Similarity NPD6015 Approved
0.6433 Remote Similarity NPD1878 Clinical (unspecified phase)
0.6433 Remote Similarity NPD6398 Clinical (unspecified phase)
0.6433 Remote Similarity NPD6016 Approved
0.6432 Remote Similarity NPD7680 Approved
0.6429 Remote Similarity NPD7033 Discontinued
0.6425 Remote Similarity NPD7296 Approved
0.6424 Remote Similarity NPD2067 Discontinued
0.642 Remote Similarity NPD3226 Approved
0.6396 Remote Similarity NPD7237 Clinical (unspecified phase)
0.6392 Remote Similarity NPD5988 Approved
0.6387 Remote Similarity NPD7115 Discovery
0.6379 Remote Similarity NPD4378 Clinical (unspecified phase)
0.6379 Remote Similarity NPD7004 Clinical (unspecified phase)
0.6376 Remote Similarity NPD5048 Discontinued
0.6373 Remote Similarity NPD7782 Clinical (unspecified phase)
0.6373 Remote Similarity NPD7783 Phase 2
0.6369 Remote Similarity NPD2801 Approved
0.6369 Remote Similarity NPD6319 Approved
0.6369 Remote Similarity NPD6059 Approved
0.6364 Remote Similarity NPD6010 Discontinued
0.6354 Remote Similarity NPD3749 Approved
0.6352 Remote Similarity NPD8328 Phase 3
0.6352 Remote Similarity NPD7457 Clinical (unspecified phase)
0.6351 Remote Similarity NPD6647 Phase 2
0.6347 Remote Similarity NPD230 Phase 1
0.6337 Remote Similarity NPD7982 Clinical (unspecified phase)
0.6335 Remote Similarity NPD8074 Phase 3
0.6331 Remote Similarity NPD2799 Discontinued
0.6331 Remote Similarity NPD7305 Phase 1
0.6325 Remote Similarity NPD6233 Phase 2

Structure

External Identifiers

PubChem CID   46905268
ChEMBL   CHEMBL1159653
ZINC  

Physicochemical Properties

Molecular Weight:  646.28
ALogP:  0.2843
MLogP:  4.43
XLogP:  5.104
# Rotatable Bonds:  17
Polar Surface Area:  144.28
# H-Bond Aceptor:  10
# H-Bond Donor:  3
# Rings:  7
# Heavy Atoms:  47

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
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