Natural Product: NPC471138

Natural Product ID:  NPC471138
Common Name:   n.a.
IUPAC Name:  
Synonyms:  
Molecular Formula:   C34H38O9
Standard InCHIKey:  DKRXIDRIIJZHJE-QNLQFRPWSA-N
Standard InCHI:  InChI=1S/C34H38O9/c1-18(2)30-16-20(4)33-23-15-19(3)25(35)32(23,38)29(37)31(17-39-28(36)21-11-7-5-8-12-21)27(40-31)24(33)26(30)41-34(42-30,43-33)22-13-9-6-10-14-22/h5-14,19-20,23-27,29,35,37-38H,1,15-17H2,2-4H3/t19-,20+,23+,24+,25-,26?,27-,29+,30+,31-,32+,33-,34?/m0/s1
Canonical SMILES:  O=C(c1ccccc1)OC[C@]12O[C@H]1[C@H]1C3OC4(O[C@]1([C@H]1[C@@]([C@@H]2O)(O)[C@@H](O)[C@H](C1)C)[C@@H](C[C@@]3(O4)C(=C)C)C)c1ccccc1
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO9756 Daphne genkwa Species Thymelaeaceae Eukaryota Flower buds PMID[23558238]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT165 Cell Line HeLa Homo sapiens IC50 = 20170 nM 15646539
NPT83 Cell Line MCF7 Homo sapiens IC50 = 25280 nM 25302529
NPT81 Cell Line A549 Homo sapiens IC50 = 23380 nM 25437914
NPT111 Cell Line K562 Homo sapiens IC50 = 20160 nM 19425589
NPT453 Cell Line HT-1080 Homo sapiens IC50 < 100 nM PubChem BioAssay data set
NPT393 Cell Line HCT-116 Homo sapiens IC50 = 28140 nM 18070960
NPT2 Others Unspecified IC50 = 3620 nM 15568791
NPT65 Cell Line HepG2 Homo sapiens IC50 = 29900 nM 15730251
NPT116 Cell Line HL-60 Homo sapiens IC50 = 30850 nM PubChem BioAssay data set
NPT466 Cell Line U-937 Homo sapiens IC50 = 18110 nM 22916954

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC471138 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC326328
1.0 High Similarity NPC323356
1.0 High Similarity NPC309991
0.9865 High Similarity NPC322048
0.9865 High Similarity NPC318447
0.9797 High Similarity NPC290683
0.9797 High Similarity NPC323001
0.9797 High Similarity NPC475638
0.9797 High Similarity NPC326235
0.9797 High Similarity NPC475548
0.9662 High Similarity NPC471135
0.9605 High Similarity NPC478124
0.9542 High Similarity NPC478125
0.9423 High Similarity NPC40138
0.9408 High Similarity NPC319404
0.9267 High Similarity NPC478123
0.9267 High Similarity NPC62792
0.9172 High Similarity NPC61891
0.9139 High Similarity NPC298072
0.9128 High Similarity NPC312393
0.9122 High Similarity NPC471139
0.9073 High Similarity NPC476173
0.9051 High Similarity NPC324769
0.9051 High Similarity NPC325732
0.9045 High Similarity NPC66193
0.9007 High Similarity NPC76103
0.8987 High Similarity NPC471134
0.8981 High Similarity NPC275477
0.8981 High Similarity NPC477188
0.8981 High Similarity NPC477190
0.8981 High Similarity NPC43304
0.894 High Similarity NPC327031
0.8931 High Similarity NPC477491
0.8919 High Similarity NPC325078
0.8896 High Similarity NPC472657
0.8896 High Similarity NPC472658
0.8889 High Similarity NPC96308
0.8839 High Similarity NPC34066
0.8812 High Similarity NPC473557
0.8812 High Similarity NPC473468
0.8812 High Similarity NPC475567
0.8808 High Similarity NPC472575
0.8808 High Similarity NPC470159
0.8808 High Similarity NPC70403
0.8808 High Similarity NPC472568
0.8808 High Similarity NPC158663
0.8808 High Similarity NPC184817
0.8808 High Similarity NPC469349
0.8808 High Similarity NPC471104
0.8808 High Similarity NPC174982
0.8808 High Similarity NPC470157
0.8808 High Similarity NPC473088
0.8808 High Similarity NPC472572
0.8808 High Similarity NPC177940
0.8808 High Similarity NPC96903
0.8808 High Similarity NPC171525
0.8808 High Similarity NPC476973
0.8808 High Similarity NPC472571
0.8808 High Similarity NPC29704
0.8808 High Similarity NPC200471
0.8805 High Similarity NPC322420
0.879 High Similarity NPC476784
0.879 High Similarity NPC49297
0.8782 High Similarity NPC154675
0.8765 High Similarity NPC477488
0.8758 High Similarity NPC475531
0.8758 High Similarity NPC475175
0.8758 High Similarity NPC475198
0.875 High Similarity NPC240115
0.8742 High Similarity NPC95810
0.8742 High Similarity NPC188865
0.8742 High Similarity NPC11685
0.8742 High Similarity NPC476974
0.8742 High Similarity NPC472570
0.8742 High Similarity NPC125106
0.8742 High Similarity NPC25768
0.8742 High Similarity NPC470152
0.8742 High Similarity NPC163719
0.8742 High Similarity NPC475122
0.8742 High Similarity NPC475759
0.8742 High Similarity NPC57628
0.8742 High Similarity NPC472569
0.8742 High Similarity NPC241951
0.8742 High Similarity NPC95265
0.8742 High Similarity NPC70716
0.8742 High Similarity NPC472573
0.8726 High Similarity NPC181924
0.8718 High Similarity NPC469422
0.8701 High Similarity NPC469448
0.8693 High Similarity NPC473760
0.8675 High Similarity NPC163087
0.8667 High Similarity NPC472576
0.8667 High Similarity NPC118080
0.8667 High Similarity NPC27377
0.8667 High Similarity NPC41481
0.8667 High Similarity NPC87448
0.8667 High Similarity NPC97947
0.8667 High Similarity NPC16912
0.8667 High Similarity NPC291599
0.8636 High Similarity NPC476975
0.8636 High Similarity NPC92293
0.8636 High Similarity NPC266265
0.8636 High Similarity NPC301556
0.8636 High Similarity NPC471101
0.8636 High Similarity NPC270590
0.8627 High Similarity NPC474935
0.8627 High Similarity NPC48599
0.8627 High Similarity NPC209592
0.8627 High Similarity NPC473602
0.8627 High Similarity NPC478263
0.8618 High Similarity NPC34943
0.8616 High Similarity NPC477623
0.86 High Similarity NPC100913
0.86 High Similarity NPC171207
0.86 High Similarity NPC97667
0.86 High Similarity NPC275592
0.86 High Similarity NPC90614
0.8581 High Similarity NPC473214
0.8581 High Similarity NPC475417
0.8581 High Similarity NPC470245
0.8581 High Similarity NPC31829
0.8581 High Similarity NPC475561
0.8571 High Similarity NPC281717
0.8562 High Similarity NPC472556
0.8562 High Similarity NPC478264
0.8553 High Similarity NPC191387
0.8553 High Similarity NPC131966
0.8553 High Similarity NPC469399
0.8543 High Similarity NPC266374
0.8535 High Similarity NPC146310
0.8529 High Similarity NPC186746
0.8526 High Similarity NPC470153
0.8526 High Similarity NPC469415
0.8516 High Similarity NPC473215
0.8506 High Similarity NPC20255
0.8487 Intermediate Similarity NPC192658
0.8481 Intermediate Similarity NPC469398
0.8481 Intermediate Similarity NPC251139
0.8477 Intermediate Similarity NPC43241
0.8477 Intermediate Similarity NPC48017
0.8477 Intermediate Similarity NPC147880
0.8477 Intermediate Similarity NPC473613
0.8477 Intermediate Similarity NPC473085
0.8477 Intermediate Similarity NPC473060
0.8477 Intermediate Similarity NPC473112
0.8477 Intermediate Similarity NPC184747
0.8477 Intermediate Similarity NPC476094
0.8477 Intermediate Similarity NPC473109
0.8477 Intermediate Similarity NPC473081
0.8477 Intermediate Similarity NPC211137
0.8477 Intermediate Similarity NPC473758
0.8477 Intermediate Similarity NPC4341
0.8477 Intermediate Similarity NPC200592
0.8471 Intermediate Similarity NPC472548
0.8471 Intermediate Similarity NPC477905
0.8462 Intermediate Similarity NPC222102
0.8462 Intermediate Similarity NPC303429
0.8442 Intermediate Similarity NPC92867
0.8442 Intermediate Similarity NPC125882
0.8442 Intermediate Similarity NPC311825
0.8431 Intermediate Similarity NPC91703
0.8421 Intermediate Similarity NPC224491
0.8411 Intermediate Similarity NPC210591
0.8411 Intermediate Similarity NPC475652
0.8411 Intermediate Similarity NPC214550
0.8395 Intermediate Similarity NPC55744
0.8375 Intermediate Similarity NPC469417
0.8366 Intermediate Similarity NPC34012
0.8365 Intermediate Similarity NPC469730
0.8365 Intermediate Similarity NPC472549
0.8365 Intermediate Similarity NPC471176
0.8365 Intermediate Similarity NPC132599
0.8365 Intermediate Similarity NPC469456
0.8365 Intermediate Similarity NPC473611
0.8365 Intermediate Similarity NPC473632
0.8355 Intermediate Similarity NPC472547
0.8355 Intermediate Similarity NPC87934
0.8355 Intermediate Similarity NPC162613
0.8344 Intermediate Similarity NPC283375
0.8344 Intermediate Similarity NPC183122
0.8333 Intermediate Similarity NPC291638
0.8333 Intermediate Similarity NPC66761
0.8333 Intermediate Similarity NPC17877
0.8333 Intermediate Similarity NPC472577
0.8333 Intermediate Similarity NPC195647
0.8313 Intermediate Similarity NPC70344
0.8313 Intermediate Similarity NPC106895
0.8312 Intermediate Similarity NPC270498
0.8312 Intermediate Similarity NPC246480
0.8312 Intermediate Similarity NPC473673
0.8312 Intermediate Similarity NPC139067
0.8312 Intermediate Similarity NPC147217
0.8312 Intermediate Similarity NPC191082
0.8312 Intermediate Similarity NPC177340
0.8312 Intermediate Similarity NPC475429
0.8312 Intermediate Similarity NPC477894
0.8304 Intermediate Similarity NPC254588
0.8302 Intermediate Similarity NPC133430
0.8302 Intermediate Similarity NPC469477
0.8289 Intermediate Similarity NPC53361

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC471138 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8263 Intermediate Similarity NPD7799 Discontinued
0.7886 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.7862 Intermediate Similarity NPD7236 Approved
0.7759 Intermediate Similarity NPD7685 Pre-registration
0.773 Intermediate Similarity NPD7239 Suspended
0.7688 Intermediate Similarity NPD8470 Clinical (unspecified phase)
0.7532 Intermediate Similarity NPD5952 Clinical (unspecified phase)
0.7451 Intermediate Similarity NPD6007 Clinical (unspecified phase)
0.743 Intermediate Similarity NPD8407 Phase 2
0.736 Intermediate Similarity NPD8368 Discontinued
0.731 Intermediate Similarity NPD7057 Phase 3
0.731 Intermediate Similarity NPD7058 Phase 2
0.7278 Intermediate Similarity NPD7966 Clinical (unspecified phase)
0.7268 Intermediate Similarity NPD8361 Approved
0.7268 Intermediate Similarity NPD8360 Approved
0.7268 Intermediate Similarity NPD8435 Approved
0.7253 Intermediate Similarity NPD8424 Clinical (unspecified phase)
0.7232 Intermediate Similarity NPD7228 Approved
0.7219 Intermediate Similarity NPD5125 Phase 3
0.7219 Intermediate Similarity NPD5126 Approved
0.7209 Intermediate Similarity NPD4967 Phase 2
0.7209 Intermediate Similarity NPD4965 Approved
0.7209 Intermediate Similarity NPD4966 Approved
0.7189 Intermediate Similarity NPD7879 Clinical (unspecified phase)
0.7158 Intermediate Similarity NPD8434 Phase 2
0.7143 Intermediate Similarity NPD8127 Discontinued
0.7143 Intermediate Similarity NPD7199 Phase 2
0.7135 Intermediate Similarity NPD37 Approved
0.7126 Intermediate Similarity NPD6234 Discontinued
0.7088 Intermediate Similarity NPD8312 Approved
0.7088 Intermediate Similarity NPD8313 Approved
0.7083 Intermediate Similarity NPD7497 Discontinued
0.7083 Intermediate Similarity NPD6273 Approved
0.7072 Intermediate Similarity NPD7240 Approved
0.7065 Intermediate Similarity NPD8150 Discontinued
0.7016 Intermediate Similarity NPD8486 Clinical (unspecified phase)
0.7 Intermediate Similarity NPD5844 Phase 1
0.6994 Remote Similarity NPD8455 Phase 2
0.6974 Remote Similarity NPD7741 Discontinued
0.6966 Remote Similarity NPD7184 Clinical (unspecified phase)
0.6948 Remote Similarity NPD7457 Clinical (unspecified phase)
0.6909 Remote Similarity NPD7266 Discontinued
0.6898 Remote Similarity NPD8397 Clinical (unspecified phase)
0.6897 Remote Similarity NPD5760 Phase 2
0.6897 Remote Similarity NPD5761 Phase 2
0.6894 Remote Similarity NPD7961 Discontinued
0.6885 Remote Similarity NPD6559 Discontinued
0.6859 Remote Similarity NPD8485 Approved
0.6845 Remote Similarity NPD6190 Approved
0.6832 Remote Similarity NPD3764 Approved
0.6823 Remote Similarity NPD7699 Phase 2
0.6823 Remote Similarity NPD7700 Phase 2
0.6821 Remote Similarity NPD7028 Phase 2
0.6818 Remote Similarity NPD4868 Clinical (unspecified phase)
0.68 Remote Similarity NPD7819 Suspended
0.6797 Remote Similarity NPD7516 Approved
0.6793 Remote Similarity NPD6764 Approved
0.6793 Remote Similarity NPD6765 Approved
0.6786 Remote Similarity NPD4628 Phase 3
0.6786 Remote Similarity NPD8320 Phase 1
0.6786 Remote Similarity NPD8319 Approved
0.678 Remote Similarity NPD4381 Clinical (unspecified phase)
0.677 Remote Similarity NPD7008 Discontinued
0.6765 Remote Similarity NPD6143 Clinical (unspecified phase)
0.6763 Remote Similarity NPD6591 Clinical (unspecified phase)
0.6763 Remote Similarity NPD7458 Discontinued
0.6758 Remote Similarity NPD3751 Discontinued
0.6754 Remote Similarity NPD6535 Approved
0.6754 Remote Similarity NPD6534 Approved
0.6752 Remote Similarity NPD7507 Approved
0.6751 Remote Similarity NPD7999 Approved
0.6744 Remote Similarity NPD6980 Clinical (unspecified phase)
0.6735 Remote Similarity NPD7435 Discontinued
0.6732 Remote Similarity NPD7327 Approved
0.6732 Remote Similarity NPD7328 Approved
0.673 Remote Similarity NPD7319 Approved
0.6725 Remote Similarity NPD8389 Clinical (unspecified phase)
0.6724 Remote Similarity NPD4380 Phase 2
0.6722 Remote Similarity NPD3787 Discontinued
0.6721 Remote Similarity NPD7804 Clinical (unspecified phase)
0.6716 Remote Similarity NPD8462 Phase 1
0.6707 Remote Similarity NPD6004 Phase 3
0.6707 Remote Similarity NPD6002 Phase 3
0.6707 Remote Similarity NPD6006 Clinical (unspecified phase)
0.6707 Remote Similarity NPD6003 Clinical (unspecified phase)
0.6707 Remote Similarity NPD5762 Approved
0.6707 Remote Similarity NPD6005 Phase 3
0.6707 Remote Similarity NPD5763 Approved
0.6705 Remote Similarity NPD7096 Clinical (unspecified phase)
0.6687 Remote Similarity NPD6663 Approved
0.6686 Remote Similarity NPD8166 Discontinued
0.6685 Remote Similarity NPD7075 Discontinued
0.6685 Remote Similarity NPD7074 Phase 3
0.6667 Remote Similarity NPD5808 Clinical (unspecified phase)
0.6667 Remote Similarity NPD3818 Discontinued
0.6667 Remote Similarity NPD2181 Clinical (unspecified phase)
0.665 Remote Similarity NPD7930 Approved
0.6649 Remote Similarity NPD6784 Approved
0.6649 Remote Similarity NPD7993 Clinical (unspecified phase)
0.6649 Remote Similarity NPD6785 Approved
0.663 Remote Similarity NPD7054 Approved
0.6628 Remote Similarity NPD7004 Clinical (unspecified phase)
0.6617 Remote Similarity NPD7874 Approved
0.6617 Remote Similarity NPD7875 Clinical (unspecified phase)
0.6612 Remote Similarity NPD7473 Discontinued
0.6611 Remote Similarity NPD5494 Approved
0.6607 Remote Similarity NPD7702 Clinical (unspecified phase)
0.6603 Remote Similarity NPD8033 Approved
0.6603 Remote Similarity NPD8378 Approved
0.6603 Remote Similarity NPD8380 Approved
0.6603 Remote Similarity NPD8335 Approved
0.6603 Remote Similarity NPD8296 Approved
0.6603 Remote Similarity NPD8379 Approved
0.6601 Remote Similarity NPD2629 Approved
0.6599 Remote Similarity NPD6823 Phase 2
0.6595 Remote Similarity NPD7472 Approved
0.6582 Remote Similarity NPD6777 Approved
0.6582 Remote Similarity NPD6781 Approved
0.6582 Remote Similarity NPD6776 Approved
0.6582 Remote Similarity NPD6782 Approved
0.6582 Remote Similarity NPD6780 Approved
0.6582 Remote Similarity NPD6779 Approved
0.6582 Remote Similarity NPD6778 Approved
0.6579 Remote Similarity NPD6858 Approved
0.6579 Remote Similarity NPD7094 Approved
0.6578 Remote Similarity NPD4338 Clinical (unspecified phase)
0.6578 Remote Similarity NPD7808 Phase 3
0.6573 Remote Similarity NPD5402 Approved
0.6573 Remote Similarity NPD8443 Clinical (unspecified phase)
0.6566 Remote Similarity NPD7698 Approved
0.6566 Remote Similarity NPD7680 Approved
0.6566 Remote Similarity NPD7696 Phase 3
0.6566 Remote Similarity NPD7697 Approved
0.6558 Remote Similarity NPD4198 Discontinued
0.655 Remote Similarity NPD7274 Clinical (unspecified phase)
0.6543 Remote Similarity NPD5736 Approved
0.6538 Remote Similarity NPD6232 Discontinued
0.6538 Remote Similarity NPD8294 Approved
0.6538 Remote Similarity NPD8377 Approved
0.6536 Remote Similarity NPD7768 Phase 2
0.6533 Remote Similarity NPD7871 Phase 2
0.6533 Remote Similarity NPD7870 Phase 2
0.6531 Remote Similarity NPD7237 Clinical (unspecified phase)
0.6527 Remote Similarity NPD7097 Phase 1
0.6524 Remote Similarity NPD7251 Discontinued
0.6517 Remote Similarity NPD7701 Phase 2
0.651 Remote Similarity NPD6685 Approved
0.6506 Remote Similarity NPD6355 Discontinued
0.6502 Remote Similarity NPD7801 Approved
0.6497 Remote Similarity NPD7503 Approved
0.6497 Remote Similarity NPD7411 Suspended
0.6494 Remote Similarity NPD5951 Approved
0.6485 Remote Similarity NPD8151 Discontinued
0.6474 Remote Similarity NPD7610 Discontinued
0.6471 Remote Similarity NPD6797 Phase 2
0.6467 Remote Similarity NPD6167 Clinical (unspecified phase)
0.6467 Remote Similarity NPD6168 Clinical (unspecified phase)
0.6467 Remote Similarity NPD6166 Phase 2
0.6461 Remote Similarity NPD6801 Discontinued
0.646 Remote Similarity NPD7736 Approved
0.6457 Remote Similarity NPD5403 Approved
0.6443 Remote Similarity NPD6214 Clinical (unspecified phase)
0.6443 Remote Similarity NPD6212 Phase 3
0.6443 Remote Similarity NPD6213 Phase 3
0.6437 Remote Similarity NPD5401 Approved
0.6433 Remote Similarity NPD7421 Clinical (unspecified phase)
0.6433 Remote Similarity NPD6674 Discontinued
0.6425 Remote Similarity NPD8404 Phase 2
0.6425 Remote Similarity NPD2393 Clinical (unspecified phase)
0.6424 Remote Similarity NPD2182 Approved
0.6422 Remote Similarity NPD7782 Clinical (unspecified phase)
0.6422 Remote Similarity NPD7783 Phase 2
0.6418 Remote Similarity NPD7211 Clinical (unspecified phase)
0.6412 Remote Similarity NPD2346 Discontinued
0.6407 Remote Similarity NPD5735 Approved
0.64 Remote Similarity NPD7314 Clinical (unspecified phase)
0.6395 Remote Similarity NPD3750 Approved
0.6395 Remote Similarity NPD6398 Clinical (unspecified phase)
0.6395 Remote Similarity NPD7003 Approved
0.6389 Remote Similarity NPD3817 Phase 2
0.6384 Remote Similarity NPD3226 Approved
0.638 Remote Similarity NPD5740 Clinical (unspecified phase)
0.638 Remote Similarity NPD6085 Phase 2
0.6378 Remote Similarity NPD7997 Clinical (unspecified phase)
0.6378 Remote Similarity NPD7852 Clinical (unspecified phase)
0.6374 Remote Similarity NPD5537 Clinical (unspecified phase)
0.6369 Remote Similarity NPD6653 Approved
0.6369 Remote Similarity NPD1934 Approved
0.6353 Remote Similarity NPD5405 Approved
0.6353 Remote Similarity NPD5408 Approved
0.6353 Remote Similarity NPD5406 Approved
0.6353 Remote Similarity NPD2935 Discontinued
0.6353 Remote Similarity NPD7137 Phase 2
0.6353 Remote Similarity NPD5404 Approved
0.6352 Remote Similarity NPD7163 Clinical (unspecified phase)
0.6348 Remote Similarity NPD6599 Discontinued
0.6347 Remote Similarity NPD4140 Approved
0.6343 Remote Similarity NPD2534 Approved
0.6343 Remote Similarity NPD2533 Approved
0.6343 Remote Similarity NPD7422 Clinical (unspecified phase)

Structure

External Identifiers

PubChem CID   73351914
ChEMBL   CHEMBL2376822
ZINC  

Physicochemical Properties

Molecular Weight:  590.25
ALogP:  -1.6953
MLogP:  4.21
XLogP:  5.898
# Rotatable Bonds:  12
Polar Surface Area:  127.21
# H-Bond Aceptor:  9
# H-Bond Donor:  3
# Rings:  8
# Heavy Atoms:  43

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
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Biological Activities  
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