Natural Product: NPC303429

Natural Product ID:  NPC303429
Common Name:   Paeoniflorin
IUPAC Name:  
Synonyms:   Paeoniflorin; Peoniflorin
Molecular Formula:   C23H28O11
Standard InCHIKey:  YKRGDOXKVOZESV-QYDSDWLYSA-N
Standard InCHI:  InChI=1S/C23H28O11/c1-20-9-22(29)13-7-23(20,32-18-16(27)15(26)14(25)12(8-24)31-18)21(13,19(33-20)34-22)10-30-17(28)11-5-3-2-4-6-11/h2-6,12-16,18-19,24-27,29H,7-10H2,1H3/t12-,13+,14-,15+,16-,18+,19-,20+,21+,22-,23-/m1/s1
Canonical SMILES:  OC[C@H]1O[C@@H](O[C@]23C[C@H]4[C@@]3(COC(=O)c3ccccc3)[C@@H]3O[C@@]2(C)C[C@]4(O3)O)[C@@H]([C@H]([C@@H]1O)O)O
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO22550 Paeonia suffruticosa Species Paeoniaceae Eukaryota Daejeon, Korea 2007-JAN PMID[19670875]
NPO30226 Paeonia albiflora Species Paeoniaceae Eukaryota roots PMID[19691309]
NPO22550 Paeonia suffruticosa Species Paeoniaceae Eukaryota TM-MC*

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT68 Individual Protein Aldose reductase Rattus norvegicus IC50 > 50000 nM 19670875
NPT2 Others Unspecified IC50 > 500000 nM 19670875
NPT848 Cell Line N9 Homo sapiens Inhibition = 100.3 % 19691309
NPT848 Cell Line N9 Homo sapiens Inhibition = 87.8 % 19691309
NPT848 Cell Line N9 Homo sapiens Inhibition = 79.5 % 19691309
NPT848 Cell Line N9 Homo sapiens Inhibition = 66.7 % 19691309
NPT848 Cell Line N9 Homo sapiens IC50 = 27800 nM 19691309
NPT108 Individual Protein Estrogen receptor alpha Homo sapiens Activity = 70.16 % 22137340
NPT108 Individual Protein Estrogen receptor alpha Homo sapiens Activity = 71.88 % 22137340
NPT113 Cell Line RAW264.7 Mus musculus IC50 > 100000 nM 23067550
NPT73 Individual Protein Solute carrier organic anion transporter family member 1B1 Homo sapiens Inhibition = 109.48 % 23571415
NPT72 Individual Protein Solute carrier organic anion transporter family member 1B3 Homo sapiens Inhibition = 101.83 % 23571415

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC303429 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC222102
0.9929 High Similarity NPC469415
0.9722 High Similarity NPC469422
0.9722 High Similarity NPC469398
0.9586 High Similarity NPC34066
0.9459 High Similarity NPC477623
0.9384 High Similarity NPC133430
0.9384 High Similarity NPC469477
0.932 High Similarity NPC5115
0.931 High Similarity NPC469448
0.9211 High Similarity NPC293568
0.9211 High Similarity NPC117943
0.9133 High Similarity NPC469399
0.9091 High Similarity NPC120012
0.9032 High Similarity NPC265600
0.9021 High Similarity NPC291599
0.9021 High Similarity NPC27377
0.9021 High Similarity NPC97947
0.9021 High Similarity NPC41481
0.9021 High Similarity NPC472576
0.9021 High Similarity NPC87448
0.9021 High Similarity NPC118080
0.8974 High Similarity NPC469459
0.8951 High Similarity NPC275592
0.8951 High Similarity NPC97667
0.8951 High Similarity NPC100913
0.8951 High Similarity NPC90614
0.8951 High Similarity NPC171207
0.894 High Similarity NPC469417
0.8919 High Similarity NPC476173
0.8889 High Similarity NPC16912
0.8854 High Similarity NPC469458
0.8854 High Similarity NPC469396
0.8854 High Similarity NPC149002
0.8854 High Similarity NPC88176
0.8844 High Similarity NPC469513
0.8836 High Similarity NPC470152
0.8836 High Similarity NPC475759
0.8836 High Similarity NPC241951
0.8819 High Similarity NPC472547
0.8805 High Similarity NPC469421
0.879 High Similarity NPC469420
0.8776 High Similarity NPC472575
0.8776 High Similarity NPC473088
0.8776 High Similarity NPC469349
0.8776 High Similarity NPC158663
0.8776 High Similarity NPC171525
0.8776 High Similarity NPC70403
0.8776 High Similarity NPC29704
0.8776 High Similarity NPC174982
0.8776 High Similarity NPC177940
0.8776 High Similarity NPC471104
0.8776 High Similarity NPC472572
0.8776 High Similarity NPC472571
0.8776 High Similarity NPC184817
0.8776 High Similarity NPC472568
0.8776 High Similarity NPC200471
0.8776 High Similarity NPC476973
0.8776 High Similarity NPC470157
0.8776 High Similarity NPC470159
0.8776 High Similarity NPC96903
0.8767 High Similarity NPC163087
0.875 High Similarity NPC477617
0.8742 High Similarity NPC472657
0.8742 High Similarity NPC471135
0.8742 High Similarity NPC472658
0.8716 High Similarity NPC478263
0.8707 High Similarity NPC476974
0.8707 High Similarity NPC38696
0.8707 High Similarity NPC472569
0.8707 High Similarity NPC472570
0.8707 High Similarity NPC475122
0.8707 High Similarity NPC57628
0.8707 High Similarity NPC163719
0.8707 High Similarity NPC11685
0.8707 High Similarity NPC95265
0.8707 High Similarity NPC25768
0.8707 High Similarity NPC70716
0.8707 High Similarity NPC125106
0.8707 High Similarity NPC472573
0.8707 High Similarity NPC95810
0.8707 High Similarity NPC188865
0.8699 High Similarity NPC34012
0.8684 High Similarity NPC469456
0.8681 High Similarity NPC39549
0.8671 High Similarity NPC291638
0.8671 High Similarity NPC195647
0.8671 High Similarity NPC472577
0.8671 High Similarity NPC17877
0.8671 High Similarity NPC66761
0.8649 High Similarity NPC478264
0.8639 High Similarity NPC91703
0.8636 High Similarity NPC476784
0.8634 High Similarity NPC148185
0.8627 High Similarity NPC475638
0.8627 High Similarity NPC290683
0.8627 High Similarity NPC475548
0.8611 High Similarity NPC472545
0.8611 High Similarity NPC472551
0.8601 High Similarity NPC474608
0.86 High Similarity NPC270590
0.86 High Similarity NPC301556
0.86 High Similarity NPC476975
0.86 High Similarity NPC471101
0.86 High Similarity NPC92293
0.86 High Similarity NPC266265
0.8599 High Similarity NPC477627
0.8591 High Similarity NPC240115
0.8591 High Similarity NPC474935
0.8589 High Similarity NPC469397
0.8571 High Similarity NPC322048
0.8571 High Similarity NPC318447
0.8544 High Similarity NPC473468
0.8544 High Similarity NPC477491
0.8544 High Similarity NPC473557
0.8544 High Similarity NPC475567
0.8543 High Similarity NPC473214
0.8543 High Similarity NPC470245
0.8542 High Similarity NPC473216
0.8542 High Similarity NPC473399
0.8537 High Similarity NPC80360
0.8533 High Similarity NPC281717
0.8533 High Similarity NPC217918
0.8528 High Similarity NPC469438
0.8523 High Similarity NPC472556
0.8523 High Similarity NPC92867
0.8523 High Similarity NPC311825
0.8506 High Similarity NPC326235
0.8506 High Similarity NPC323001
0.8503 High Similarity NPC77493
0.8491 Intermediate Similarity NPC475198
0.8491 Intermediate Similarity NPC475531
0.8491 Intermediate Similarity NPC475175
0.8487 Intermediate Similarity NPC470153
0.8487 Intermediate Similarity NPC471103
0.8485 Intermediate Similarity NPC195114
0.8481 Intermediate Similarity NPC471493
0.8477 Intermediate Similarity NPC473215
0.8467 Intermediate Similarity NPC20255
0.8467 Intermediate Similarity NPC477737
0.8462 Intermediate Similarity NPC323356
0.8462 Intermediate Similarity NPC309991
0.8462 Intermediate Similarity NPC326328
0.8462 Intermediate Similarity NPC471138
0.8456 Intermediate Similarity NPC34943
0.8446 Intermediate Similarity NPC472546
0.8442 Intermediate Similarity NPC473632
0.8442 Intermediate Similarity NPC469730
0.8442 Intermediate Similarity NPC132599
0.8438 Intermediate Similarity NPC102465
0.8435 Intermediate Similarity NPC183270
0.8435 Intermediate Similarity NPC473613
0.8435 Intermediate Similarity NPC43241
0.8435 Intermediate Similarity NPC473758
0.8435 Intermediate Similarity NPC473112
0.8435 Intermediate Similarity NPC48017
0.8435 Intermediate Similarity NPC473085
0.8435 Intermediate Similarity NPC147880
0.8435 Intermediate Similarity NPC184747
0.8435 Intermediate Similarity NPC473109
0.8435 Intermediate Similarity NPC473081
0.8435 Intermediate Similarity NPC477904
0.8435 Intermediate Similarity NPC473060
0.8435 Intermediate Similarity NPC4341
0.8435 Intermediate Similarity NPC200592
0.8435 Intermediate Similarity NPC476094
0.8435 Intermediate Similarity NPC211137
0.8434 Intermediate Similarity NPC188217
0.8431 Intermediate Similarity NPC472548
0.8431 Intermediate Similarity NPC477905
0.8425 Intermediate Similarity NPC183122
0.8425 Intermediate Similarity NPC283375
0.8424 Intermediate Similarity NPC260300
0.8421 Intermediate Similarity NPC91730
0.8418 Intermediate Similarity NPC295408
0.8418 Intermediate Similarity NPC329960
0.8418 Intermediate Similarity NPC150893
0.8411 Intermediate Similarity NPC473760
0.84 Intermediate Similarity NPC125882
0.8397 Intermediate Similarity NPC319404
0.8389 Intermediate Similarity NPC477894
0.8385 Intermediate Similarity NPC477469
0.8385 Intermediate Similarity NPC477471
0.8385 Intermediate Similarity NPC477473
0.8385 Intermediate Similarity NPC477488
0.8385 Intermediate Similarity NPC477466
0.8385 Intermediate Similarity NPC469419
0.8378 Intermediate Similarity NPC224491
0.8367 Intermediate Similarity NPC214550
0.8367 Intermediate Similarity NPC210591
0.8367 Intermediate Similarity NPC475652
0.8366 Intermediate Similarity NPC51602
0.8366 Intermediate Similarity NPC197037
0.8354 Intermediate Similarity NPC43304
0.8354 Intermediate Similarity NPC477188
0.8354 Intermediate Similarity NPC478124
0.8354 Intermediate Similarity NPC477190
0.8344 Intermediate Similarity NPC48599
0.8344 Intermediate Similarity NPC473602
0.8344 Intermediate Similarity NPC209592

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC303429 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8171 Intermediate Similarity NPD8470 Clinical (unspecified phase)
0.7892 Intermediate Similarity NPD7799 Discontinued
0.7823 Intermediate Similarity NPD5952 Clinical (unspecified phase)
0.7778 Intermediate Similarity NPD8407 Phase 2
0.7706 Intermediate Similarity NPD8368 Discontinued
0.7471 Intermediate Similarity NPD7228 Approved
0.7468 Intermediate Similarity NPD7236 Approved
0.7455 Intermediate Similarity NPD4966 Approved
0.7455 Intermediate Similarity NPD4967 Phase 2
0.7455 Intermediate Similarity NPD4965 Approved
0.7434 Intermediate Similarity NPD7966 Clinical (unspecified phase)
0.7386 Intermediate Similarity NPD8434 Phase 2
0.7379 Intermediate Similarity NPD5125 Phase 3
0.7379 Intermediate Similarity NPD5126 Approved
0.7365 Intermediate Similarity NPD6234 Discontinued
0.7346 Intermediate Similarity NPD7239 Suspended
0.733 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.7303 Intermediate Similarity NPD8435 Approved
0.7303 Intermediate Similarity NPD8360 Approved
0.7303 Intermediate Similarity NPD8361 Approved
0.7299 Intermediate Similarity NPD7240 Approved
0.7273 Intermediate Similarity NPD37 Approved
0.7267 Intermediate Similarity NPD6007 Clinical (unspecified phase)
0.72 Intermediate Similarity NPD6559 Discontinued
0.7191 Intermediate Similarity NPD8424 Clinical (unspecified phase)
0.716 Intermediate Similarity NPD8389 Clinical (unspecified phase)
0.7152 Intermediate Similarity NPD7266 Discontinued
0.7127 Intermediate Similarity NPD7879 Clinical (unspecified phase)
0.7125 Intermediate Similarity NPD4628 Phase 3
0.7119 Intermediate Similarity NPD8313 Approved
0.7119 Intermediate Similarity NPD8312 Approved
0.7083 Intermediate Similarity NPD2629 Approved
0.7043 Intermediate Similarity NPD8486 Clinical (unspecified phase)
0.7042 Intermediate Similarity NPD2181 Clinical (unspecified phase)
0.7041 Intermediate Similarity NPD7057 Phase 3
0.7041 Intermediate Similarity NPD7058 Phase 2
0.7024 Intermediate Similarity NPD8455 Phase 2
0.7006 Intermediate Similarity NPD7685 Pre-registration
0.7 Intermediate Similarity NPD4381 Clinical (unspecified phase)
0.6988 Remote Similarity NPD6591 Clinical (unspecified phase)
0.6977 Remote Similarity NPD7199 Phase 2
0.6971 Remote Similarity NPD3818 Discontinued
0.6932 Remote Similarity NPD5844 Phase 1
0.6918 Remote Similarity NPD4198 Discontinued
0.6903 Remote Similarity NPD7008 Discontinued
0.6893 Remote Similarity NPD7074 Phase 3
0.689 Remote Similarity NPD6143 Clinical (unspecified phase)
0.6886 Remote Similarity NPD7458 Discontinued
0.6882 Remote Similarity NPD8485 Approved
0.6879 Remote Similarity NPD8127 Discontinued
0.6875 Remote Similarity NPD969 Suspended
0.6871 Remote Similarity NPD6190 Approved
0.6867 Remote Similarity NPD6980 Clinical (unspecified phase)
0.6865 Remote Similarity NPD6534 Approved
0.6865 Remote Similarity NPD6535 Approved
0.6859 Remote Similarity NPD3764 Approved
0.6845 Remote Similarity NPD7699 Phase 2
0.6845 Remote Similarity NPD7700 Phase 2
0.6836 Remote Similarity NPD7804 Clinical (unspecified phase)
0.6836 Remote Similarity NPD7054 Approved
0.6821 Remote Similarity NPD8462 Phase 1
0.6813 Remote Similarity NPD8150 Discontinued
0.681 Remote Similarity NPD6398 Clinical (unspecified phase)
0.6807 Remote Similarity NPD6273 Approved
0.6806 Remote Similarity NPD8320 Phase 1
0.6806 Remote Similarity NPD8319 Approved
0.68 Remote Similarity NPD7184 Clinical (unspecified phase)
0.6798 Remote Similarity NPD7472 Approved
0.6783 Remote Similarity NPD2182 Approved
0.6779 Remote Similarity NPD7741 Discontinued
0.6778 Remote Similarity NPD4338 Clinical (unspecified phase)
0.676 Remote Similarity NPD6797 Phase 2
0.6754 Remote Similarity NPD7435 Discontinued
0.6746 Remote Similarity NPD7028 Phase 2
0.6746 Remote Similarity NPD4380 Phase 2
0.6744 Remote Similarity NPD4868 Clinical (unspecified phase)
0.6735 Remote Similarity NPD5951 Approved
0.6726 Remote Similarity NPD1653 Approved
0.6725 Remote Similarity NPD7096 Clinical (unspecified phase)
0.6725 Remote Similarity NPD7819 Suspended
0.6724 Remote Similarity NPD5494 Approved
0.6722 Remote Similarity NPD6765 Approved
0.6722 Remote Similarity NPD7251 Discontinued
0.6722 Remote Similarity NPD6764 Approved
0.672 Remote Similarity NPD7237 Clinical (unspecified phase)
0.6713 Remote Similarity NPD6686 Approved
0.6707 Remote Similarity NPD8166 Discontinued
0.6705 Remote Similarity NPD7075 Discontinued
0.669 Remote Similarity NPD4141 Clinical (unspecified phase)
0.6689 Remote Similarity NPD3412 Clinical (unspecified phase)
0.6685 Remote Similarity NPD7808 Phase 3
0.6684 Remote Similarity NPD6781 Approved
0.6684 Remote Similarity NPD6780 Approved
0.6684 Remote Similarity NPD6777 Approved
0.6684 Remote Similarity NPD6778 Approved
0.6684 Remote Similarity NPD6782 Approved
0.6684 Remote Similarity NPD6776 Approved
0.6684 Remote Similarity NPD6779 Approved
0.6667 Remote Similarity NPD7680 Approved
0.6667 Remote Similarity NPD7274 Clinical (unspecified phase)
0.6667 Remote Similarity NPD7497 Discontinued
0.6667 Remote Similarity NPD5537 Clinical (unspecified phase)
0.6667 Remote Similarity NPD6831 Clinical (unspecified phase)
0.6649 Remote Similarity NPD8397 Clinical (unspecified phase)
0.6647 Remote Similarity NPD6599 Discontinued
0.6647 Remote Similarity NPD7004 Clinical (unspecified phase)
0.6647 Remote Similarity NPD2534 Approved
0.6647 Remote Similarity NPD2532 Approved
0.6647 Remote Similarity NPD2533 Approved
0.6645 Remote Similarity NPD7457 Clinical (unspecified phase)
0.6628 Remote Similarity NPD5760 Phase 2
0.6628 Remote Similarity NPD5761 Phase 2
0.6626 Remote Similarity NPD6002 Phase 3
0.6626 Remote Similarity NPD6006 Clinical (unspecified phase)
0.6626 Remote Similarity NPD6003 Clinical (unspecified phase)
0.6626 Remote Similarity NPD6005 Phase 3
0.6626 Remote Similarity NPD6004 Phase 3
0.6625 Remote Similarity NPD230 Phase 1
0.6622 Remote Similarity NPD690 Clinical (unspecified phase)
0.6615 Remote Similarity NPD6823 Phase 2
0.6604 Remote Similarity NPD7961 Discontinued
0.66 Remote Similarity NPD8404 Phase 2
0.66 Remote Similarity NPD7516 Approved
0.6598 Remote Similarity NPD7999 Approved
0.659 Remote Similarity NPD5402 Approved
0.6588 Remote Similarity NPD5808 Clinical (unspecified phase)
0.658 Remote Similarity NPD7696 Phase 3
0.658 Remote Similarity NPD7698 Approved
0.658 Remote Similarity NPD7697 Approved
0.6576 Remote Similarity NPD6784 Approved
0.6576 Remote Similarity NPD6785 Approved
0.657 Remote Similarity NPD6801 Discontinued
0.6558 Remote Similarity NPD7507 Approved
0.6554 Remote Similarity NPD6232 Discontinued
0.6548 Remote Similarity NPD7875 Clinical (unspecified phase)
0.6548 Remote Similarity NPD7874 Approved
0.6545 Remote Similarity NPD6674 Discontinued
0.6543 Remote Similarity NPD6212 Phase 3
0.6543 Remote Similarity NPD6214 Clinical (unspecified phase)
0.6543 Remote Similarity NPD6213 Phase 3
0.6538 Remote Similarity NPD7319 Approved
0.6536 Remote Similarity NPD7473 Discontinued
0.6533 Remote Similarity NPD7328 Approved
0.6533 Remote Similarity NPD7327 Approved
0.6532 Remote Similarity NPD2393 Clinical (unspecified phase)
0.6531 Remote Similarity NPD7701 Phase 2
0.6524 Remote Similarity NPD2346 Discontinued
0.6524 Remote Similarity NPD7702 Clinical (unspecified phase)
0.6506 Remote Similarity NPD7003 Approved
0.6506 Remote Similarity NPD1878 Clinical (unspecified phase)
0.6503 Remote Similarity NPD164 Approved
0.65 Remote Similarity NPD3751 Discontinued
0.65 Remote Similarity NPD6663 Approved
0.6497 Remote Similarity NPD8151 Discontinued
0.6494 Remote Similarity NPD3817 Phase 2
0.6494 Remote Similarity NPD6287 Discontinued
0.6484 Remote Similarity NPD7993 Clinical (unspecified phase)
0.648 Remote Similarity NPD6166 Phase 2
0.648 Remote Similarity NPD6167 Clinical (unspecified phase)
0.648 Remote Similarity NPD6168 Clinical (unspecified phase)
0.6474 Remote Similarity NPD1934 Approved
0.6471 Remote Similarity NPD5403 Approved
0.6471 Remote Similarity NPD7163 Clinical (unspecified phase)
0.6463 Remote Similarity NPD2935 Discontinued
0.6462 Remote Similarity NPD7871 Phase 2
0.6462 Remote Similarity NPD7870 Phase 2
0.6461 Remote Similarity NPD3787 Discontinued
0.645 Remote Similarity NPD5401 Approved
0.6447 Remote Similarity NPD9545 Approved
0.6446 Remote Similarity NPD7421 Clinical (unspecified phase)
0.6443 Remote Similarity NPD6010 Discontinued
0.6442 Remote Similarity NPD7097 Phase 1
0.6437 Remote Similarity NPD1465 Phase 2
0.6432 Remote Similarity NPD7782 Clinical (unspecified phase)
0.6432 Remote Similarity NPD7090 Clinical (unspecified phase)
0.6432 Remote Similarity NPD7801 Approved
0.6432 Remote Similarity NPD7783 Phase 2
0.6424 Remote Similarity NPD2343 Clinical (unspecified phase)
0.642 Remote Similarity NPD6355 Discontinued
0.6418 Remote Similarity NPD7930 Approved
0.6416 Remote Similarity NPD7411 Suspended
0.6407 Remote Similarity NPD4109 Clinical (unspecified phase)
0.6407 Remote Similarity NPD2575 Approved
0.6407 Remote Similarity NPD4110 Phase 3
0.6407 Remote Similarity NPD3750 Approved
0.6405 Remote Similarity NPD8516 Approved
0.6405 Remote Similarity NPD7503 Approved
0.6405 Remote Similarity NPD8378 Approved
0.6405 Remote Similarity NPD8379 Approved
0.6405 Remote Similarity NPD8513 Phase 3
0.6405 Remote Similarity NPD8515 Approved
0.6405 Remote Similarity NPD8296 Approved
0.6405 Remote Similarity NPD8517 Approved
0.6405 Remote Similarity NPD8380 Approved
0.6405 Remote Similarity NPD8335 Approved
0.6405 Remote Similarity NPD8033 Approved
0.6395 Remote Similarity NPD3226 Approved
0.6395 Remote Similarity NPD2067 Discontinued
0.6391 Remote Similarity NPD6799 Approved
0.6386 Remote Similarity NPD970 Clinical (unspecified phase)

Structure

External Identifiers

PubChem CID   46882877
ChEMBL   CHEMBL1078549
ZINC  

Physicochemical Properties

Molecular Weight:  480.16
ALogP:  -3.3912
MLogP:  2.78
XLogP:  1.22
# Rotatable Bonds:  13
Polar Surface Area:  164.37
# H-Bond Aceptor:  11
# H-Bond Donor:  5
# Rings:  5
# Heavy Atoms:  34

Download Data

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Structure MOL file  
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Biological Activities  
Similar NPs/Drugs