Natural Product: NPC476890

Natural Product ID:  NPC476890
Common Name:   (4R,4aS,6aR,6aS,6bR,8aR,9S,12aR,14bR)-9-(hydroxymethyl)-2,2,6a,6b,9,12a-hexamethyl-4-(3-methylbut-2-enoyloxy)-10-oxo-3,4,5,6,6a,7,8,8a,11,12,13,14b-dodecahydro-1H-picene-4a-carboxylic acid
IUPAC Name:   (4R,4aS,6aR,6aS,6bR,8aR,9S,12aR,14bR)-9-(hydroxymethyl)-2,2,6a,6b,9,12a-hexamethyl-4-(3-methylbut-2-enoyloxy)-10-oxo-3,4,5,6,6a,7,8,8a,11,12,13,14b-dodecahydro-1H-picene-4a-carboxylic acid
Synonyms:  
Molecular Formula:   C35H52O6
Standard InCHIKey:  PMRGZMORCRUODW-SCSBYZNTSA-N
Standard InCHI:  InChI=1S/C35H52O6/c1-21(2)17-28(38)41-27-19-30(3,4)18-23-22-9-10-25-31(5)13-12-26(37)32(6,20-36)24(31)11-14-34(25,8)33(22,7)15-16-35(23,27)29(39)40/h9,17,23-25,27,36H,10-16,18-20H2,1-8H3,(H,39,40)/t23-,24-,25-,27-,31+,32-,33-,34-,35+/m1/s1
Canonical SMILES:  OC[C@@]1(C)C(=O)CC[C@]2([C@H]1CC[C@@]1([C@@H]2CC=C2[C@@]1(C)CC[C@@]1([C@@H]2CC(C[C@H]1OC(=O)C=C(C)C)(C)C)C(=O)O)C)C
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO33642 Combretum sundaicum Species Combretaceae Eukaryota flowers Bac Son, Lang Son Province, Vietnam 1997-JUL PMID[19572612]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT2796 Individual Protein Apoptosis regulator Bcl-X Homo sapiens Ki = 5300 nM 19572612
NPT393 Cell Line HCT-116 Homo sapiens IC50 = 11400 nM 19572612
NPT137 Cell Line L1210 Mus musculus IC50 = 12300 nM 19572612
NPT91 Cell Line KB Homo sapiens IC50 = 35500 nM 19572612
NPT83 Cell Line MCF7 Homo sapiens IC50 = 42500 nM 19572612

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC476890 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9895 High Similarity NPC476889
0.9894 High Similarity NPC476888
0.9894 High Similarity NPC93744
0.9789 High Similarity NPC40918
0.9368 High Similarity NPC26413
0.9263 High Similarity NPC98874
0.9158 High Similarity NPC148523
0.9149 High Similarity NPC169343
0.9053 High Similarity NPC74751
0.9053 High Similarity NPC91010
0.9053 High Similarity NPC23621
0.9053 High Similarity NPC78580
0.9053 High Similarity NPC184006
0.9043 High Similarity NPC471588
0.9043 High Similarity NPC6255
0.901 High Similarity NPC475570
0.8958 High Similarity NPC23241
0.8958 High Similarity NPC195715
0.8947 High Similarity NPC86368
0.8947 High Similarity NPC272075
0.8947 High Similarity NPC295643
0.8947 High Similarity NPC214756
0.8936 High Similarity NPC198818
0.8922 High Similarity NPC473483
0.8878 High Similarity NPC471966
0.8842 High Similarity NPC233455
0.8842 High Similarity NPC966
0.8842 High Similarity NPC4036
0.8842 High Similarity NPC65120
0.8842 High Similarity NPC228784
0.8842 High Similarity NPC282616
0.8842 High Similarity NPC158030
0.8842 High Similarity NPC155120
0.8842 High Similarity NPC288833
0.8842 High Similarity NPC145067
0.8842 High Similarity NPC324341
0.8788 High Similarity NPC117685
0.8776 High Similarity NPC89225
0.8774 High Similarity NPC110861
0.8737 High Similarity NPC172361
0.8737 High Similarity NPC86372
0.8737 High Similarity NPC113989
0.8737 High Similarity NPC120840
0.8713 High Similarity NPC95899
0.87 High Similarity NPC235142
0.87 High Similarity NPC473160
0.8692 High Similarity NPC268954
0.8687 High Similarity NPC164349
0.8673 High Similarity NPC472806
0.8673 High Similarity NPC167193
0.866 High Similarity NPC474529
0.866 High Similarity NPC222047
0.8646 High Similarity NPC285184
0.8646 High Similarity NPC60755
0.8646 High Similarity NPC77099
0.8646 High Similarity NPC470590
0.8632 High Similarity NPC270768
0.8632 High Similarity NPC293048
0.8632 High Similarity NPC234346
0.8632 High Similarity NPC59263
0.8632 High Similarity NPC61543
0.8632 High Similarity NPC474700
0.8632 High Similarity NPC130520
0.8632 High Similarity NPC281524
0.8632 High Similarity NPC121798
0.8632 High Similarity NPC263393
0.8632 High Similarity NPC225585
0.8632 High Similarity NPC127689
0.8632 High Similarity NPC30522
0.8617 High Similarity NPC158141
0.8617 High Similarity NPC173089
0.8614 High Similarity NPC258547
0.8614 High Similarity NPC273668
0.8614 High Similarity NPC283343
0.86 High Similarity NPC476299
0.86 High Similarity NPC474190
0.86 High Similarity NPC474012
0.8586 High Similarity NPC476878
0.8586 High Similarity NPC476879
0.8571 High Similarity NPC139570
0.8571 High Similarity NPC474727
0.8557 High Similarity NPC118490
0.8557 High Similarity NPC298554
0.8542 High Similarity NPC291028
0.8542 High Similarity NPC470589
0.8542 High Similarity NPC130278
0.8542 High Similarity NPC126369
0.8542 High Similarity NPC193750
0.8542 High Similarity NPC8062
0.8542 High Similarity NPC474728
0.8542 High Similarity NPC111110
0.8529 High Similarity NPC478057
0.8526 High Similarity NPC182797
0.8526 High Similarity NPC474511
0.8526 High Similarity NPC246708
0.8526 High Similarity NPC52169
0.8526 High Similarity NPC40552
0.8526 High Similarity NPC1753
0.8519 High Similarity NPC44170
0.8515 High Similarity NPC471075
0.85 High Similarity NPC234617
0.85 High Similarity NPC316598
0.85 High Similarity NPC478056
0.85 High Similarity NPC174663
0.85 High Similarity NPC124703
0.8485 Intermediate Similarity NPC132824
0.8485 Intermediate Similarity NPC242848
0.8485 Intermediate Similarity NPC230151
0.8485 Intermediate Similarity NPC201657
0.8485 Intermediate Similarity NPC327179
0.8469 Intermediate Similarity NPC148964
0.8469 Intermediate Similarity NPC296164
0.8469 Intermediate Similarity NPC84893
0.8469 Intermediate Similarity NPC209868
0.8454 Intermediate Similarity NPC474525
0.8454 Intermediate Similarity NPC105189
0.8454 Intermediate Similarity NPC38754
0.8438 Intermediate Similarity NPC290972
0.8438 Intermediate Similarity NPC274330
0.8438 Intermediate Similarity NPC64872
0.8438 Intermediate Similarity NPC198664
0.8438 Intermediate Similarity NPC470588
0.8438 Intermediate Similarity NPC25906
0.8438 Intermediate Similarity NPC143232
0.8431 Intermediate Similarity NPC32577
0.8431 Intermediate Similarity NPC114540
0.8431 Intermediate Similarity NPC155332
0.8421 Intermediate Similarity NPC102683
0.8421 Intermediate Similarity NPC293564
0.8421 Intermediate Similarity NPC51700
0.8421 Intermediate Similarity NPC18064
0.8421 Intermediate Similarity NPC88716
0.8421 Intermediate Similarity NPC46912
0.8421 Intermediate Similarity NPC242468
0.8421 Intermediate Similarity NPC130577
0.8421 Intermediate Similarity NPC98442
0.8421 Intermediate Similarity NPC142415
0.8421 Intermediate Similarity NPC162107
0.8421 Intermediate Similarity NPC68160
0.8421 Intermediate Similarity NPC171203
0.8421 Intermediate Similarity NPC307426
0.8416 Intermediate Similarity NPC473576
0.8416 Intermediate Similarity NPC475156
0.8411 Intermediate Similarity NPC90952
0.8411 Intermediate Similarity NPC277769
0.8411 Intermediate Similarity NPC4573
0.84 Intermediate Similarity NPC175351
0.84 Intermediate Similarity NPC261935
0.84 Intermediate Similarity NPC53844
0.84 Intermediate Similarity NPC121402
0.84 Intermediate Similarity NPC158347
0.84 Intermediate Similarity NPC132753
0.84 Intermediate Similarity NPC253826
0.84 Intermediate Similarity NPC151681
0.84 Intermediate Similarity NPC224356
0.84 Intermediate Similarity NPC106112
0.8367 Intermediate Similarity NPC136313
0.8367 Intermediate Similarity NPC63118
0.8367 Intermediate Similarity NPC49776
0.8367 Intermediate Similarity NPC74855
0.8367 Intermediate Similarity NPC139692
0.8367 Intermediate Similarity NPC229281
0.8367 Intermediate Similarity NPC474436
0.8367 Intermediate Similarity NPC115021
0.8367 Intermediate Similarity NPC307335
0.8365 Intermediate Similarity NPC88349
0.8351 Intermediate Similarity NPC227467
0.8351 Intermediate Similarity NPC210037
0.8351 Intermediate Similarity NPC51486
0.8351 Intermediate Similarity NPC477872
0.8351 Intermediate Similarity NPC7260
0.8351 Intermediate Similarity NPC273621
0.8351 Intermediate Similarity NPC120968
0.8351 Intermediate Similarity NPC290614
0.8351 Intermediate Similarity NPC18872
0.8351 Intermediate Similarity NPC46441
0.835 Intermediate Similarity NPC473283
0.835 Intermediate Similarity NPC180204
0.835 Intermediate Similarity NPC329345
0.835 Intermediate Similarity NPC90177
0.835 Intermediate Similarity NPC112009
0.835 Intermediate Similarity NPC475526
0.8333 Intermediate Similarity NPC17733
0.8333 Intermediate Similarity NPC181225
0.8333 Intermediate Similarity NPC474512
0.8333 Intermediate Similarity NPC473242
0.8333 Intermediate Similarity NPC470629
0.8333 Intermediate Similarity NPC290690
0.8333 Intermediate Similarity NPC122056
0.8318 Intermediate Similarity NPC474315
0.8317 Intermediate Similarity NPC29765
0.8317 Intermediate Similarity NPC58942
0.8317 Intermediate Similarity NPC111214
0.8317 Intermediate Similarity NPC271614
0.8317 Intermediate Similarity NPC188833
0.8317 Intermediate Similarity NPC260149
0.8316 Intermediate Similarity NPC72638
0.8316 Intermediate Similarity NPC91525
0.8316 Intermediate Similarity NPC325594
0.8316 Intermediate Similarity NPC322159

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC476890 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.9053 High Similarity NPD7748 Approved
0.8842 High Similarity NPD7515 Phase 2
0.8776 High Similarity NPD7902 Approved
0.8469 Intermediate Similarity NPD7901 Clinical (unspecified phase)
0.8469 Intermediate Similarity NPD7900 Approved
0.8137 Intermediate Similarity NPD7638 Approved
0.8108 Intermediate Similarity NPD7115 Discovery
0.8058 Intermediate Similarity NPD7639 Approved
0.8058 Intermediate Similarity NPD7640 Approved
0.7788 Intermediate Similarity NPD4225 Approved
0.7778 Intermediate Similarity NPD7513 Clinical (unspecified phase)
0.7692 Intermediate Similarity NPD6084 Phase 2
0.7692 Intermediate Similarity NPD6083 Phase 2
0.7692 Intermediate Similarity NPD8328 Phase 3
0.7685 Intermediate Similarity NPD6402 Approved
0.7685 Intermediate Similarity NPD7128 Approved
0.7685 Intermediate Similarity NPD5739 Approved
0.7685 Intermediate Similarity NPD6675 Approved
0.7579 Intermediate Similarity NPD7645 Phase 2
0.7576 Intermediate Similarity NPD7146 Approved
0.7576 Intermediate Similarity NPD6684 Approved
0.7576 Intermediate Similarity NPD7334 Approved
0.7576 Intermediate Similarity NPD5330 Approved
0.7576 Intermediate Similarity NPD7521 Approved
0.7576 Intermediate Similarity NPD6409 Approved
0.7576 Intermediate Similarity NPD3618 Phase 1
0.7549 Intermediate Similarity NPD8035 Phase 2
0.7549 Intermediate Similarity NPD8034 Phase 2
0.7549 Intermediate Similarity NPD6411 Approved
0.7545 Intermediate Similarity NPD6899 Approved
0.7545 Intermediate Similarity NPD6881 Approved
0.7545 Intermediate Similarity NPD7320 Approved
0.7526 Intermediate Similarity NPD4752 Clinical (unspecified phase)
0.7525 Intermediate Similarity NPD5328 Approved
0.7525 Intermediate Similarity NPD7285 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD8130 Phase 1
0.7477 Intermediate Similarity NPD6373 Approved
0.7477 Intermediate Similarity NPD6372 Approved
0.7476 Intermediate Similarity NPD6399 Phase 3
0.7475 Intermediate Similarity NPD1694 Approved
0.7475 Intermediate Similarity NPD7520 Clinical (unspecified phase)
0.7455 Intermediate Similarity NPD5697 Approved
0.7455 Intermediate Similarity NPD5701 Approved
0.7434 Intermediate Similarity NPD8297 Approved
0.7426 Intermediate Similarity NPD6903 Approved
0.7426 Intermediate Similarity NPD5737 Approved
0.7426 Intermediate Similarity NPD6672 Approved
0.7411 Intermediate Similarity NPD7102 Approved
0.7411 Intermediate Similarity NPD6883 Approved
0.7411 Intermediate Similarity NPD7290 Approved
0.7407 Intermediate Similarity NPD7632 Discontinued
0.7387 Intermediate Similarity NPD6686 Approved
0.7379 Intermediate Similarity NPD6079 Approved
0.7374 Intermediate Similarity NPD3133 Approved
0.7374 Intermediate Similarity NPD3666 Approved
0.7374 Intermediate Similarity NPD3665 Phase 1
0.7353 Intermediate Similarity NPD5764 Clinical (unspecified phase)
0.7353 Intermediate Similarity NPD6101 Approved
0.7345 Intermediate Similarity NPD6869 Approved
0.7345 Intermediate Similarity NPD6650 Approved
0.7345 Intermediate Similarity NPD6649 Approved
0.7345 Intermediate Similarity NPD6847 Approved
0.7345 Intermediate Similarity NPD6617 Approved
0.7333 Intermediate Similarity NPD5695 Phase 3
0.7327 Intermediate Similarity NPD3573 Approved
0.7321 Intermediate Similarity NPD4061 Clinical (unspecified phase)
0.7321 Intermediate Similarity NPD6013 Approved
0.7321 Intermediate Similarity NPD6012 Approved
0.7321 Intermediate Similarity NPD6014 Approved
0.7308 Intermediate Similarity NPD5778 Approved
0.7308 Intermediate Similarity NPD5779 Approved
0.729 Intermediate Similarity NPD5696 Approved
0.7281 Intermediate Similarity NPD6882 Approved
0.7236 Intermediate Similarity NPD7319 Approved
0.7232 Intermediate Similarity NPD6011 Approved
0.7228 Intermediate Similarity NPD3574 Clinical (unspecified phase)
0.7212 Intermediate Similarity NPD5693 Phase 1
0.72 Intermediate Similarity NPD4786 Approved
0.7196 Intermediate Similarity NPD4755 Approved
0.7193 Intermediate Similarity NPD6401 Clinical (unspecified phase)
0.7184 Intermediate Similarity NPD4753 Phase 2
0.7179 Intermediate Similarity NPD8295 Clinical (unspecified phase)
0.7172 Intermediate Similarity NPD3667 Approved
0.717 Intermediate Similarity NPD6356 Clinical (unspecified phase)
0.7168 Intermediate Similarity NPD8132 Clinical (unspecified phase)
0.7154 Intermediate Similarity NPD7736 Approved
0.7143 Intermediate Similarity NPD6412 Phase 2
0.7143 Intermediate Similarity NPD4202 Approved
0.7131 Intermediate Similarity NPD7507 Approved
0.7115 Intermediate Similarity NPD5785 Approved
0.7105 Intermediate Similarity NPD5955 Clinical (unspecified phase)
0.7103 Intermediate Similarity NPD5220 Clinical (unspecified phase)
0.7103 Intermediate Similarity NPD5221 Approved
0.7103 Intermediate Similarity NPD4697 Phase 3
0.7103 Intermediate Similarity NPD7732 Phase 3
0.7103 Intermediate Similarity NPD5222 Approved
0.7103 Intermediate Similarity NPD7614 Phase 1
0.7091 Intermediate Similarity NPD5211 Phase 2
0.708 Intermediate Similarity NPD5345 Clinical (unspecified phase)
0.7064 Intermediate Similarity NPD5285 Approved
0.7064 Intermediate Similarity NPD4700 Approved
0.7064 Intermediate Similarity NPD5286 Approved
0.7064 Intermediate Similarity NPD4696 Approved
0.7037 Intermediate Similarity NPD5173 Approved
0.7019 Intermediate Similarity NPD6673 Approved
0.7019 Intermediate Similarity NPD6080 Approved
0.7019 Intermediate Similarity NPD6904 Approved
0.7009 Intermediate Similarity NPD1698 Clinical (unspecified phase)
0.7 Intermediate Similarity NPD6319 Approved
0.7 Intermediate Similarity NPD8377 Approved
0.7 Intermediate Similarity NPD8294 Approved
0.697 Remote Similarity NPD4695 Discontinued
0.6964 Remote Similarity NPD5141 Approved
0.6949 Remote Similarity NPD6274 Approved
0.6949 Remote Similarity NPD6868 Approved
0.6942 Remote Similarity NPD8033 Approved
0.6942 Remote Similarity NPD8378 Approved
0.6942 Remote Similarity NPD8380 Approved
0.6942 Remote Similarity NPD8335 Approved
0.6942 Remote Similarity NPD8379 Approved
0.6942 Remote Similarity NPD8296 Approved
0.6937 Remote Similarity NPD5226 Approved
0.6937 Remote Similarity NPD4633 Approved
0.6937 Remote Similarity NPD5224 Approved
0.6937 Remote Similarity NPD5225 Approved
0.6935 Remote Similarity NPD8293 Discontinued
0.6923 Remote Similarity NPD8133 Approved
0.6917 Remote Similarity NPD7100 Approved
0.6917 Remote Similarity NPD7101 Approved
0.6911 Remote Similarity NPD7492 Approved
0.6893 Remote Similarity NPD4519 Discontinued
0.6893 Remote Similarity NPD5279 Phase 3
0.6893 Remote Similarity NPD4623 Approved
0.6887 Remote Similarity NPD7637 Suspended
0.6875 Remote Similarity NPD5174 Approved
0.6875 Remote Similarity NPD5175 Approved
0.686 Remote Similarity NPD6054 Approved
0.686 Remote Similarity NPD6059 Approved
0.6857 Remote Similarity NPD6051 Approved
0.6855 Remote Similarity NPD6616 Approved
0.6852 Remote Similarity NPD5210 Approved
0.6852 Remote Similarity NPD4629 Approved
0.6847 Remote Similarity NPD5223 Approved
0.6842 Remote Similarity NPD5954 Clinical (unspecified phase)
0.6838 Remote Similarity NPD6053 Discontinued
0.6833 Remote Similarity NPD7328 Approved
0.6833 Remote Similarity NPD6335 Approved
0.6833 Remote Similarity NPD7327 Approved
0.6832 Remote Similarity NPD4221 Approved
0.6832 Remote Similarity NPD4223 Phase 3
0.681 Remote Similarity NPD4634 Approved
0.6804 Remote Similarity NPD8039 Approved
0.6803 Remote Similarity NPD6908 Approved
0.6803 Remote Similarity NPD7503 Approved
0.6803 Remote Similarity NPD6909 Approved
0.68 Remote Similarity NPD7078 Approved
0.6796 Remote Similarity NPD5329 Approved
0.6792 Remote Similarity NPD6698 Approved
0.6792 Remote Similarity NPD46 Approved
0.678 Remote Similarity NPD4632 Approved
0.6777 Remote Similarity NPD7516 Approved
0.6762 Remote Similarity NPD5208 Approved
0.6759 Remote Similarity NPD6001 Approved
0.6754 Remote Similarity NPD4767 Approved
0.6754 Remote Similarity NPD4768 Approved
0.6754 Remote Similarity NPD6008 Approved
0.675 Remote Similarity NPD6317 Approved
0.6748 Remote Similarity NPD6370 Approved
0.6731 Remote Similarity NPD6098 Approved
0.6729 Remote Similarity NPD5284 Approved
0.6729 Remote Similarity NPD5281 Approved
0.6729 Remote Similarity NPD6050 Approved
0.6726 Remote Similarity NPD4754 Approved
0.6699 Remote Similarity NPD3668 Phase 3
0.6699 Remote Similarity NPD4197 Approved
0.6699 Remote Similarity NPD6400 Clinical (unspecified phase)
0.6694 Remote Similarity NPD6313 Approved
0.6694 Remote Similarity NPD6314 Approved
0.6667 Remote Similarity NPD6015 Approved
0.6667 Remote Similarity NPD8517 Approved
0.6667 Remote Similarity NPD8513 Phase 3
0.6667 Remote Similarity NPD6016 Approved
0.6667 Remote Similarity NPD8516 Approved
0.6667 Remote Similarity NPD8515 Approved
0.6667 Remote Similarity NPD6371 Approved
0.6638 Remote Similarity NPD5128 Approved
0.6638 Remote Similarity NPD4729 Approved
0.6638 Remote Similarity NPD4730 Approved
0.6636 Remote Similarity NPD5692 Phase 3
0.6635 Remote Similarity NPD5363 Approved
0.6634 Remote Similarity NPD7525 Registered
0.6613 Remote Similarity NPD5988 Approved
0.6612 Remote Similarity NPD6009 Approved
0.6602 Remote Similarity NPD4788 Approved
0.66 Remote Similarity NPD5784 Clinical (unspecified phase)
0.66 Remote Similarity NPD3617 Approved
0.6574 Remote Similarity NPD5694 Approved
0.6571 Remote Similarity NPD4138 Approved
0.6571 Remote Similarity NPD4690 Approved
0.6571 Remote Similarity NPD4689 Approved

Structure

External Identifiers

PubChem CID   45269015
ChEMBL   CHEMBL552717
ZINC  

Physicochemical Properties

Molecular Weight:  568.38
ALogP:  2.8544
MLogP:  4.65
XLogP:  7.908
# Rotatable Bonds:  15
Polar Surface Area:  100.9
# H-Bond Aceptor:  6
# H-Bond Donor:  2
# Rings:  5
# Heavy Atoms:  41

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
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Biological Activities  
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