Natural Product: NPC474864

Natural Product ID:  NPC474864
Common Name:   3-Geranylgeranyl-1,2-Dihydroxy-4-Methoxybenzene
IUPAC Name:   4-methoxy-3-[(2E,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraenyl]benzene-1,2-diol
Synonyms:  
Molecular Formula:   C27H40O3
Standard InCHIKey:  JGFQHGDOQGIOND-MLAGYPMBSA-N
Standard InCHI:  InChI=1S/C27H40O3/c1-20(2)10-7-11-21(3)12-8-13-22(4)14-9-15-23(5)16-17-24-26(30-6)19-18-25(28)27(24)29/h10,12,14,16,18-19,28-29H,7-9,11,13,15,17H2,1-6H3/b21-12+,22-14+,23-16+
Canonical SMILES:  COc1ccc(c(c1C/C=C(/CC/C=C(/CC/C=C(/CCC=C(C)C)C)C)C)O)O
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO27847 Suillus granulatus Species Suillaceae Eukaryota PMID[1294697]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT1843 Organism Aeromonas hydrophila Aeromonas hydrophila MIC > 100 ug/ml 8277308
NPT16 Organism Staphylococcus aureus Staphylococcus aureus MIC > 100 ug/ml 18625769
NPT168 Cell Line P388 Mus musculus IC50 = 2.8 ug/ml PubChem BioAssay data set
NPT172 Organism Proteus mirabilis Proteus mirabilis MIC > 100 ug/ml PubChem BioAssay data set
NPT79 Organism Bacillus subtilis Bacillus subtilis MIC > 100 ug/ml 19817445
NPT175 Organism Enterococcus faecalis Enterococcus faecalis MIC > 100 ug/ml DrugMatrix in vitro pharmacology data
NPT4678 Organism Hafnia alvei Hafnia alvei MIC > 100 ug/ml 27128177
NPT19 Organism Escherichia coli Escherichia coli MIC > 100 ug/ml 25101911
NPT2 Others Unspecified IC50 > 5 ug/ml 18362191
NPT729 Organism Micrococcus luteus Micrococcus luteus MIC = 100 ug/ml 19721074

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC474864 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9664 High Similarity NPC112596
0.9658 High Similarity NPC246967
0.9492 High Similarity NPC135414
0.935 High Similarity NPC220935
0.9344 High Similarity NPC266691
0.9339 High Similarity NPC476006
0.9333 High Similarity NPC183446
0.9268 High Similarity NPC58164
0.9268 High Similarity NPC10225
0.9268 High Similarity NPC158477
0.9244 High Similarity NPC285289
0.9231 High Similarity NPC474612
0.9194 High Similarity NPC51840
0.9194 High Similarity NPC234488
0.9194 High Similarity NPC299221
0.9194 High Similarity NPC311680
0.918 High Similarity NPC245060
0.912 High Similarity NPC12275
0.912 High Similarity NPC45715
0.912 High Similarity NPC82503
0.912 High Similarity NPC474356
0.912 High Similarity NPC142530
0.9098 High Similarity NPC234400
0.9098 High Similarity NPC60885
0.9091 High Similarity NPC95168
0.9048 High Similarity NPC218884
0.9048 High Similarity NPC6451
0.9032 High Similarity NPC19694
0.9024 High Similarity NPC214406
0.9024 High Similarity NPC103823
0.9024 High Similarity NPC18924
0.9024 High Similarity NPC44748
0.9024 High Similarity NPC28730
0.9024 High Similarity NPC78974
0.9024 High Similarity NPC223136
0.8992 High Similarity NPC20674
0.8976 High Similarity NPC474810
0.8968 High Similarity NPC232275
0.896 High Similarity NPC190144
0.8952 High Similarity NPC236760
0.8952 High Similarity NPC169474
0.8952 High Similarity NPC82679
0.8952 High Similarity NPC246620
0.8952 High Similarity NPC293054
0.8952 High Similarity NPC124452
0.8952 High Similarity NPC324112
0.8952 High Similarity NPC159968
0.8952 High Similarity NPC236791
0.8952 High Similarity NPC282000
0.8952 High Similarity NPC74817
0.8952 High Similarity NPC216836
0.8943 High Similarity NPC299584
0.8943 High Similarity NPC265483
0.8943 High Similarity NPC82483
0.8934 High Similarity NPC136319
0.8934 High Similarity NPC121115
0.8926 High Similarity NPC75713
0.8906 High Similarity NPC103967
0.8898 High Similarity NPC474635
0.8889 High Similarity NPC224157
0.8889 High Similarity NPC214860
0.8889 High Similarity NPC192687
0.8852 High Similarity NPC270326
0.8837 High Similarity NPC255147
0.8837 High Similarity NPC283009
0.8837 High Similarity NPC134968
0.8837 High Similarity NPC201357
0.8837 High Similarity NPC472337
0.8837 High Similarity NPC261873
0.8837 High Similarity NPC281521
0.8833 High Similarity NPC308217
0.8828 High Similarity NPC37196
0.8828 High Similarity NPC94236
0.8824 High Similarity NPC52464
0.8824 High Similarity NPC33270
0.8824 High Similarity NPC304208
0.8824 High Similarity NPC259638
0.8824 High Similarity NPC69261
0.8819 High Similarity NPC147317
0.8819 High Similarity NPC15543
0.881 High Similarity NPC45824
0.879 High Similarity NPC233410
0.879 High Similarity NPC203133
0.879 High Similarity NPC221077
0.879 High Similarity NPC472093
0.879 High Similarity NPC105925
0.879 High Similarity NPC193544
0.879 High Similarity NPC117214
0.879 High Similarity NPC208950
0.879 High Similarity NPC298757
0.879 High Similarity NPC33654
0.879 High Similarity NPC116907
0.879 High Similarity NPC57490
0.879 High Similarity NPC251855
0.879 High Similarity NPC17943
0.879 High Similarity NPC475169
0.878 High Similarity NPC220598
0.878 High Similarity NPC165375
0.8779 High Similarity NPC19869
0.877 High Similarity NPC49341
0.8769 High Similarity NPC472336
0.8769 High Similarity NPC472334
0.876 High Similarity NPC106215
0.875 High Similarity NPC161203
0.874 High Similarity NPC126836
0.8739 High Similarity NPC193067
0.8739 High Similarity NPC150624
0.873 High Similarity NPC63179
0.873 High Similarity NPC154866
0.873 High Similarity NPC28765
0.8707 High Similarity NPC168657
0.8702 High Similarity NPC272157
0.8702 High Similarity NPC474282
0.8702 High Similarity NPC6262
0.8702 High Similarity NPC201145
0.8702 High Similarity NPC326797
0.8702 High Similarity NPC107551
0.8702 High Similarity NPC73535
0.8702 High Similarity NPC276490
0.8702 High Similarity NPC102904
0.8702 High Similarity NPC176051
0.8702 High Similarity NPC90615
0.8702 High Similarity NPC103976
0.8702 High Similarity NPC25111
0.8699 High Similarity NPC41562
0.8699 High Similarity NPC71579
0.8699 High Similarity NPC473411
0.8699 High Similarity NPC262253
0.8692 High Similarity NPC252095
0.8682 High Similarity NPC168059
0.8682 High Similarity NPC269528
0.8682 High Similarity NPC11060
0.8682 High Similarity NPC229442
0.8678 High Similarity NPC226629
0.8678 High Similarity NPC184302
0.8672 High Similarity NPC470096
0.8672 High Similarity NPC470095
0.8667 High Similarity NPC15860
0.8667 High Similarity NPC127894
0.8667 High Similarity NPC219070
0.8667 High Similarity NPC470759
0.8661 High Similarity NPC476968
0.8661 High Similarity NPC170844
0.8661 High Similarity NPC212015
0.8655 High Similarity NPC53906
0.8655 High Similarity NPC808
0.8651 High Similarity NPC50368
0.8651 High Similarity NPC252131
0.8651 High Similarity NPC127587
0.8651 High Similarity NPC210355
0.8651 High Similarity NPC266555
0.8636 High Similarity NPC79622
0.8636 High Similarity NPC29868
0.8636 High Similarity NPC212942
0.8636 High Similarity NPC292882
0.8636 High Similarity NPC127218
0.8636 High Similarity NPC245207
0.8636 High Similarity NPC319647
0.8636 High Similarity NPC25966
0.8632 High Similarity NPC195873
0.8629 High Similarity NPC197757
0.8629 High Similarity NPC282496
0.8629 High Similarity NPC228922
0.8629 High Similarity NPC233526
0.8629 High Similarity NPC84086
0.8626 High Similarity NPC300846
0.8626 High Similarity NPC476639
0.8626 High Similarity NPC114155
0.8615 High Similarity NPC310854
0.8609 High Similarity NPC233320
0.8607 High Similarity NPC229401
0.8605 High Similarity NPC127624
0.8605 High Similarity NPC202762
0.8605 High Similarity NPC86655
0.8595 High Similarity NPC190514
0.8594 High Similarity NPC229231
0.8583 High Similarity NPC186843
0.8583 High Similarity NPC114064
0.8583 High Similarity NPC470213
0.8583 High Similarity NPC206615
0.8583 High Similarity NPC98631
0.8571 High Similarity NPC295719
0.8571 High Similarity NPC34431
0.8571 High Similarity NPC276737
0.8571 High Similarity NPC160283
0.8571 High Similarity NPC284464
0.8571 High Similarity NPC22610
0.8571 High Similarity NPC254759
0.8571 High Similarity NPC165026
0.8571 High Similarity NPC76451
0.8571 High Similarity NPC73505
0.8571 High Similarity NPC223953
0.856 High Similarity NPC228972
0.856 High Similarity NPC5796
0.856 High Similarity NPC206487
0.856 High Similarity NPC122792
0.855 High Similarity NPC112246
0.855 High Similarity NPC327382
0.855 High Similarity NPC256262
0.855 High Similarity NPC121812

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC474864 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8661 High Similarity NPD3027 Phase 3
0.8438 Intermediate Similarity NPD1529 Clinical (unspecified phase)
0.8359 Intermediate Similarity NPD1530 Clinical (unspecified phase)
0.8321 Intermediate Similarity NPD1612 Clinical (unspecified phase)
0.8321 Intermediate Similarity NPD1613 Approved
0.8319 Intermediate Similarity NPD228 Approved
0.8197 Intermediate Similarity NPD6671 Approved
0.8047 Intermediate Similarity NPD4749 Approved
0.8 Intermediate Similarity NPD6917 Clinical (unspecified phase)
0.7939 Intermediate Similarity NPD3018 Phase 2
0.7895 Intermediate Similarity NPD6410 Clinical (unspecified phase)
0.7857 Intermediate Similarity NPD1548 Phase 1
0.782 Intermediate Similarity NPD4625 Phase 3
0.7769 Intermediate Similarity NPD2983 Phase 2
0.7769 Intermediate Similarity NPD2982 Phase 2
0.7755 Intermediate Similarity NPD2801 Approved
0.7752 Intermediate Similarity NPD1610 Phase 2
0.7744 Intermediate Similarity NPD4908 Phase 1
0.7712 Intermediate Similarity NPD846 Approved
0.7712 Intermediate Similarity NPD940 Approved
0.771 Intermediate Similarity NPD6696 Suspended
0.7705 Intermediate Similarity NPD4750 Phase 3
0.7692 Intermediate Similarity NPD2981 Phase 2
0.7669 Intermediate Similarity NPD2861 Phase 2
0.7655 Intermediate Similarity NPD1653 Approved
0.763 Intermediate Similarity NPD4907 Clinical (unspecified phase)
0.7615 Intermediate Similarity NPD422 Phase 1
0.7541 Intermediate Similarity NPD290 Approved
0.7538 Intermediate Similarity NPD3496 Discontinued
0.7517 Intermediate Similarity NPD2393 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD4379 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD1511 Approved
0.7481 Intermediate Similarity NPD1091 Approved
0.7479 Intermediate Similarity NPD289 Clinical (unspecified phase)
0.746 Intermediate Similarity NPD5283 Phase 1
0.7459 Intermediate Similarity NPD968 Approved
0.745 Intermediate Similarity NPD1934 Approved
0.7419 Intermediate Similarity NPD3022 Approved
0.7419 Intermediate Similarity NPD3021 Approved
0.7397 Intermediate Similarity NPD1512 Approved
0.7376 Intermediate Similarity NPD6100 Approved
0.7376 Intermediate Similarity NPD6099 Approved
0.7372 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.7353 Intermediate Similarity NPD596 Approved
0.7353 Intermediate Similarity NPD600 Approved
0.735 Intermediate Similarity NPD9296 Approved
0.7348 Intermediate Similarity NPD3705 Approved
0.7339 Intermediate Similarity NPD2684 Approved
0.7338 Intermediate Similarity NPD230 Phase 1
0.7333 Intermediate Similarity NPD1242 Phase 1
0.7324 Intermediate Similarity NPD3540 Phase 1
0.7319 Intermediate Similarity NPD2674 Phase 3
0.7303 Intermediate Similarity NPD3882 Suspended
0.7288 Intermediate Similarity NPD844 Approved
0.7266 Intermediate Similarity NPD1558 Phase 1
0.7254 Intermediate Similarity NPD3539 Phase 1
0.7252 Intermediate Similarity NPD1357 Approved
0.7244 Intermediate Similarity NPD7843 Approved
0.7241 Intermediate Similarity NPD2219 Phase 1
0.7239 Intermediate Similarity NPD3600 Clinical (unspecified phase)
0.7234 Intermediate Similarity NPD6111 Discontinued
0.7217 Intermediate Similarity NPD9295 Approved
0.7209 Intermediate Similarity NPD7157 Approved
0.7197 Intermediate Similarity NPD4626 Approved
0.7197 Intermediate Similarity NPD1778 Approved
0.7194 Intermediate Similarity NPD840 Approved
0.7194 Intermediate Similarity NPD839 Approved
0.719 Intermediate Similarity NPD4868 Clinical (unspecified phase)
0.7172 Intermediate Similarity NPD6398 Clinical (unspecified phase)
0.7164 Intermediate Similarity NPD2233 Approved
0.7164 Intermediate Similarity NPD2232 Approved
0.7164 Intermediate Similarity NPD2230 Approved
0.7154 Intermediate Similarity NPD7340 Approved
0.7143 Intermediate Similarity NPD2238 Phase 2
0.7143 Intermediate Similarity NPD3620 Phase 2
0.7143 Intermediate Similarity NPD3619 Clinical (unspecified phase)
0.7143 Intermediate Similarity NPD1240 Approved
0.7133 Intermediate Similarity NPD2935 Discontinued
0.713 Intermediate Similarity NPD9094 Approved
0.7122 Intermediate Similarity NPD3144 Approved
0.7122 Intermediate Similarity NPD3145 Approved
0.7109 Intermediate Similarity NPD7635 Approved
0.7103 Intermediate Similarity NPD5177 Phase 3
0.7097 Intermediate Similarity NPD6234 Discontinued
0.7089 Intermediate Similarity NPD6168 Clinical (unspecified phase)
0.7089 Intermediate Similarity NPD6166 Phase 2
0.7089 Intermediate Similarity NPD6167 Clinical (unspecified phase)
0.7083 Intermediate Similarity NPD7266 Discontinued
0.7083 Intermediate Similarity NPD288 Approved
0.7083 Intermediate Similarity NPD2029 Clinical (unspecified phase)
0.7063 Intermediate Similarity NPD7054 Approved
0.7059 Intermediate Similarity NPD8651 Approved
0.7054 Intermediate Similarity NPD1398 Phase 1
0.7047 Intermediate Similarity NPD1940 Clinical (unspecified phase)
0.7042 Intermediate Similarity NPD1607 Approved
0.7034 Intermediate Similarity NPD970 Clinical (unspecified phase)
0.7032 Intermediate Similarity NPD7975 Clinical (unspecified phase)
0.7029 Intermediate Similarity NPD9494 Approved
0.7027 Intermediate Similarity NPD4357 Discontinued
0.7021 Intermediate Similarity NPD4060 Phase 1
0.7019 Intermediate Similarity NPD7074 Phase 3
0.7019 Intermediate Similarity NPD7472 Approved
0.7013 Intermediate Similarity NPD3817 Phase 2
0.7007 Intermediate Similarity NPD5307 Clinical (unspecified phase)
0.6993 Remote Similarity NPD37 Approved
0.6986 Remote Similarity NPD5698 Clinical (unspecified phase)
0.6986 Remote Similarity NPD1652 Phase 2
0.698 Remote Similarity NPD4378 Clinical (unspecified phase)
0.698 Remote Similarity NPD7447 Phase 1
0.6974 Remote Similarity NPD4675 Approved
0.6974 Remote Similarity NPD4678 Approved
0.6972 Remote Similarity NPD447 Suspended
0.697 Remote Similarity NPD5536 Phase 2
0.6962 Remote Similarity NPD6232 Discontinued
0.6959 Remote Similarity NPD7124 Phase 2
0.6953 Remote Similarity NPD9280 Clinical (unspecified phase)
0.6947 Remote Similarity NPD709 Approved
0.6944 Remote Similarity NPD1510 Phase 2
0.694 Remote Similarity NPD9381 Approved
0.694 Remote Similarity NPD9384 Approved
0.6939 Remote Similarity NPD3892 Phase 2
0.6939 Remote Similarity NPD1878 Clinical (unspecified phase)
0.6937 Remote Similarity NPD7473 Discontinued
0.6934 Remote Similarity NPD2922 Phase 1
0.6933 Remote Similarity NPD7251 Discontinued
0.6923 Remote Similarity NPD6653 Approved
0.6917 Remote Similarity NPD2934 Approved
0.6917 Remote Similarity NPD2933 Approved
0.6912 Remote Similarity NPD2235 Phase 2
0.6912 Remote Similarity NPD2231 Phase 2
0.6903 Remote Similarity NPD5402 Approved
0.6901 Remote Similarity NPD943 Approved
0.6894 Remote Similarity NPD3818 Discontinued
0.6894 Remote Similarity NPD7228 Approved
0.6892 Remote Similarity NPD2677 Approved
0.689 Remote Similarity NPD4338 Clinical (unspecified phase)
0.6871 Remote Similarity NPD3060 Approved
0.6871 Remote Similarity NPD6674 Discontinued
0.6871 Remote Similarity NPD6797 Phase 2
0.6866 Remote Similarity NPD5691 Approved
0.6863 Remote Similarity NPD4380 Phase 2
0.6861 Remote Similarity NPD9622 Approved
0.686 Remote Similarity NPD2860 Approved
0.686 Remote Similarity NPD2859 Approved
0.6859 Remote Similarity NPD4967 Phase 2
0.6859 Remote Similarity NPD4966 Approved
0.6859 Remote Similarity NPD4965 Approved
0.6855 Remote Similarity NPD291 Approved
0.6853 Remote Similarity NPD5123 Clinical (unspecified phase)
0.6853 Remote Similarity NPD5124 Phase 1
0.6852 Remote Similarity NPD5844 Phase 1
0.6849 Remote Similarity NPD5763 Approved
0.6849 Remote Similarity NPD5762 Approved
0.6846 Remote Similarity NPD9379 Approved
0.6846 Remote Similarity NPD9377 Approved
0.6846 Remote Similarity NPD821 Approved
0.6835 Remote Similarity NPD6584 Phase 3
0.6833 Remote Similarity NPD845 Approved
0.6829 Remote Similarity NPD3020 Approved
0.6828 Remote Similarity NPD651 Clinical (unspecified phase)
0.6818 Remote Similarity NPD5089 Approved
0.6818 Remote Similarity NPD5090 Approved
0.6806 Remote Similarity NPD1772 Clinical (unspecified phase)
0.6806 Remote Similarity NPD4097 Suspended
0.68 Remote Similarity NPD7213 Phase 3
0.68 Remote Similarity NPD1774 Approved
0.68 Remote Similarity NPD7212 Phase 2
0.6797 Remote Similarity NPD4005 Discontinued
0.6792 Remote Similarity NPD7199 Phase 2
0.6791 Remote Similarity NPD7533 Approved
0.6791 Remote Similarity NPD7534 Approved
0.6788 Remote Similarity NPD1608 Approved
0.6788 Remote Similarity NPD7808 Phase 3
0.6788 Remote Similarity NPD9269 Phase 2
0.6781 Remote Similarity NPD1551 Phase 2
0.6779 Remote Similarity NPD6190 Approved
0.6777 Remote Similarity NPD1432 Clinical (unspecified phase)
0.6763 Remote Similarity NPD2797 Approved
0.6757 Remote Similarity NPD4236 Phase 3
0.6757 Remote Similarity NPD4237 Approved
0.6755 Remote Similarity NPD3157 Approved
0.6755 Remote Similarity NPD2532 Approved
0.6755 Remote Similarity NPD3158 Phase 1
0.6755 Remote Similarity NPD2533 Approved
0.6755 Remote Similarity NPD2534 Approved
0.6755 Remote Similarity NPD1424 Approved
0.6755 Remote Similarity NPD4160 Clinical (unspecified phase)
0.6755 Remote Similarity NPD1754 Clinical (unspecified phase)
0.6744 Remote Similarity NPD5451 Approved
0.6738 Remote Similarity NPD5752 Clinical (unspecified phase)
0.6736 Remote Similarity NPD5735 Approved
0.6735 Remote Similarity NPD1552 Clinical (unspecified phase)
0.6735 Remote Similarity NPD1550 Clinical (unspecified phase)
0.6735 Remote Similarity NPD1375 Discontinued
0.6731 Remote Similarity NPD1465 Phase 2
0.673 Remote Similarity NPD5494 Approved
0.6718 Remote Similarity NPD1138 Approved
0.6715 Remote Similarity NPD1611 Approved
0.6714 Remote Similarity NPD9621 Approved
0.6714 Remote Similarity NPD3690 Phase 2

Structure

External Identifiers

PubChem CID   14487955
ChEMBL   CHEMBL485670
ZINC  

Physicochemical Properties

Molecular Weight:  412.30
ALogP:  4.6016
MLogP:  4.1
XLogP:  7.791
# Rotatable Bonds:  20
Polar Surface Area:  49.69
# H-Bond Aceptor:  0
# H-Bond Donor:  2
# Rings:  1
# Heavy Atoms:  30

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
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