Natural Product: NPC18924

Natural Product ID:  NPC18924
Common Name:   Dalberatin C
IUPAC Name:   3-[(E)-3-(3-hydroxy-2-methoxyphenyl)prop-2-enyl]-2,6-dimethoxyphenol
Synonyms:   Dalberatin C
Molecular Formula:   C18H20O5
Standard InCHIKey:  MFXCDAODRNXRCE-GQCTYLIASA-N
Standard InCHI:  InChI=1S/C18H20O5/c1-21-15-11-10-13(18(23-3)16(15)20)7-4-6-12-8-5-9-14(19)17(12)22-2/h4-6,8-11,19-20H,7H2,1-3H3/b6-4+
Canonical SMILES:  COc1c(/C=C/Cc2ccc(c(c2OC)O)OC)cccc1O
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO33059 Dalbergia Genus Fabaceae Eukaryota PMID[14695799]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT2 Others Unspecified Activity = 86.7 % 7911157
NPT2 Others Unspecified Activity = 65 % 18570470
NPT80 Cell Line Raji Homo sapiens Activity > 80 % 23398362
NPT2 Others Unspecified IC50 = 223 molar ratio 21634430
NPT80 Cell Line Raji Homo sapiens Activity = 60 % 21634430
NPT2 Others Unspecified Activity = 0 % 16872131
NPT2 Others Unspecified Activity = 20.9 % 27084496
NPT80 Cell Line Raji Homo sapiens Activity > 80 % 17844994

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC18924 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC78974
1.0 High Similarity NPC103823
1.0 High Similarity NPC214406
1.0 High Similarity NPC44748
1.0 High Similarity NPC223136
1.0 High Similarity NPC28730
0.9917 High Similarity NPC236791
0.9917 High Similarity NPC324112
0.9917 High Similarity NPC293054
0.9917 High Similarity NPC159968
0.9917 High Similarity NPC124452
0.9917 High Similarity NPC246620
0.9917 High Similarity NPC82679
0.9917 High Similarity NPC282000
0.9917 High Similarity NPC169474
0.9917 High Similarity NPC74817
0.9916 High Similarity NPC234400
0.9916 High Similarity NPC60885
0.9916 High Similarity NPC265483
0.9916 High Similarity NPC299584
0.9916 High Similarity NPC82483
0.9754 High Similarity NPC10225
0.9754 High Similarity NPC58164
0.975 High Similarity NPC203133
0.975 High Similarity NPC208950
0.975 High Similarity NPC233410
0.975 High Similarity NPC105925
0.975 High Similarity NPC298757
0.975 High Similarity NPC117214
0.975 High Similarity NPC116907
0.975 High Similarity NPC193544
0.975 High Similarity NPC251855
0.975 High Similarity NPC17943
0.975 High Similarity NPC472093
0.975 High Similarity NPC221077
0.975 High Similarity NPC475169
0.975 High Similarity NPC57490
0.9748 High Similarity NPC95168
0.9675 High Similarity NPC234488
0.9675 High Similarity NPC126836
0.9675 High Similarity NPC51840
0.9675 High Similarity NPC299221
0.9675 High Similarity NPC311680
0.9672 High Similarity NPC28765
0.9672 High Similarity NPC154866
0.9664 High Similarity NPC473411
0.9664 High Similarity NPC71579
0.9664 High Similarity NPC262253
0.9593 High Similarity NPC212015
0.959 High Similarity NPC236760
0.959 High Similarity NPC252131
0.959 High Similarity NPC127587
0.959 High Similarity NPC210355
0.959 High Similarity NPC266555
0.9583 High Similarity NPC121115
0.9583 High Similarity NPC282496
0.9583 High Similarity NPC197757
0.9583 High Similarity NPC233526
0.9583 High Similarity NPC136319
0.9583 High Similarity NPC228922
0.958 High Similarity NPC75713
0.952 High Similarity NPC6451
0.9512 High Similarity NPC206615
0.9512 High Similarity NPC470213
0.9512 High Similarity NPC186843
0.9512 High Similarity NPC266691
0.9512 High Similarity NPC98631
0.9508 High Similarity NPC223953
0.9508 High Similarity NPC76451
0.95 High Similarity NPC41562
0.9496 High Similarity NPC166759
0.9444 High Similarity NPC229442
0.9444 High Similarity NPC168059
0.9444 High Similarity NPC471390
0.9444 High Similarity NPC471391
0.9444 High Similarity NPC475840
0.9444 High Similarity NPC32778
0.944 High Similarity NPC232275
0.944 High Similarity NPC45715
0.944 High Similarity NPC474356
0.944 High Similarity NPC12275
0.9435 High Similarity NPC476968
0.9435 High Similarity NPC170844
0.9412 High Similarity NPC247364
0.9412 High Similarity NPC232084
0.9412 High Similarity NPC474565
0.9412 High Similarity NPC61516
0.9412 High Similarity NPC10932
0.937 High Similarity NPC317380
0.9365 High Similarity NPC202762
0.9365 High Similarity NPC86655
0.9365 High Similarity NPC127624
0.936 High Similarity NPC224157
0.936 High Similarity NPC472338
0.936 High Similarity NPC91291
0.936 High Similarity NPC192687
0.936 High Similarity NPC214860
0.9344 High Similarity NPC228972
0.9344 High Similarity NPC206487
0.9344 High Similarity NPC183446
0.9344 High Similarity NPC5796
0.9344 High Similarity NPC122792
0.9328 High Similarity NPC226629
0.9328 High Similarity NPC20674
0.9297 High Similarity NPC470356
0.9297 High Similarity NPC94750
0.9297 High Similarity NPC472337
0.9297 High Similarity NPC313081
0.9297 High Similarity NPC474206
0.9297 High Similarity NPC158142
0.9297 High Similarity NPC69029
0.9297 High Similarity NPC108198
0.9297 High Similarity NPC200557
0.9297 High Similarity NPC112246
0.9297 High Similarity NPC121812
0.9297 High Similarity NPC112939
0.9297 High Similarity NPC10314
0.9297 High Similarity NPC256262
0.9297 High Similarity NPC294884
0.9291 High Similarity NPC36661
0.9286 High Similarity NPC470096
0.9286 High Similarity NPC470095
0.9286 High Similarity NPC474017
0.9286 High Similarity NPC15543
0.9286 High Similarity NPC472597
0.928 High Similarity NPC45824
0.928 High Similarity NPC469951
0.928 High Similarity NPC469963
0.928 High Similarity NPC190144
0.9274 High Similarity NPC242032
0.9274 High Similarity NPC470699
0.9262 High Similarity NPC84086
0.9256 High Similarity NPC49341
0.9225 High Similarity NPC16435
0.9225 High Similarity NPC227503
0.9225 High Similarity NPC474639
0.9225 High Similarity NPC230734
0.9225 High Similarity NPC202846
0.9225 High Similarity NPC472334
0.9225 High Similarity NPC162659
0.9225 High Similarity NPC265433
0.9225 High Similarity NPC248727
0.9225 High Similarity NPC472336
0.9225 High Similarity NPC270456
0.9225 High Similarity NPC143139
0.9225 High Similarity NPC306441
0.9219 High Similarity NPC469659
0.9219 High Similarity NPC125649
0.9219 High Similarity NPC555
0.9219 High Similarity NPC7515
0.9219 High Similarity NPC56764
0.9219 High Similarity NPC209199
0.9219 High Similarity NPC188378
0.9219 High Similarity NPC276026
0.9219 High Similarity NPC206737
0.9219 High Similarity NPC289258
0.9213 High Similarity NPC35932
0.9213 High Similarity NPC253105
0.9213 High Similarity NPC201587
0.9213 High Similarity NPC160991
0.9213 High Similarity NPC184447
0.9213 High Similarity NPC7903
0.9213 High Similarity NPC16208
0.9194 High Similarity NPC181361
0.9194 High Similarity NPC112596
0.9167 High Similarity NPC254625
0.9167 High Similarity NPC475961
0.916 High Similarity NPC259638
0.9154 High Similarity NPC272157
0.9154 High Similarity NPC107551
0.9154 High Similarity NPC25111
0.9154 High Similarity NPC474282
0.9154 High Similarity NPC276490
0.9154 High Similarity NPC326797
0.9154 High Similarity NPC176051
0.9154 High Similarity NPC73535
0.9154 High Similarity NPC6262
0.9154 High Similarity NPC242715
0.9154 High Similarity NPC211549
0.9154 High Similarity NPC201145
0.9154 High Similarity NPC102904
0.9154 High Similarity NPC90615
0.9154 High Similarity NPC103976
0.9154 High Similarity NPC56329
0.9147 High Similarity NPC61946
0.9147 High Similarity NPC240279
0.9147 High Similarity NPC180602
0.9147 High Similarity NPC260898
0.9147 High Similarity NPC234333
0.9147 High Similarity NPC241241
0.9147 High Similarity NPC47398
0.9147 High Similarity NPC55239
0.9147 High Similarity NPC151224
0.9147 High Similarity NPC214853
0.9141 High Similarity NPC158331
0.9141 High Similarity NPC11060
0.9127 High Similarity NPC202582
0.9127 High Similarity NPC3439
0.9127 High Similarity NPC218856
0.9127 High Similarity NPC226788

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC18924 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.9435 High Similarity NPD3027 Phase 3
0.9048 High Similarity NPD1529 Clinical (unspecified phase)
0.8968 High Similarity NPD1530 Clinical (unspecified phase)
0.8915 High Similarity NPD1612 Clinical (unspecified phase)
0.8915 High Similarity NPD1613 Approved
0.8819 High Similarity NPD3018 Phase 2
0.8655 High Similarity NPD228 Approved
0.8651 High Similarity NPD2982 Phase 2
0.8651 High Similarity NPD2983 Phase 2
0.8571 High Similarity NPD2981 Phase 2
0.8361 Intermediate Similarity NPD5283 Phase 1
0.8359 Intermediate Similarity NPD4379 Clinical (unspecified phase)
0.8321 Intermediate Similarity NPD4908 Phase 1
0.832 Intermediate Similarity NPD1548 Phase 1
0.8203 Intermediate Similarity NPD1610 Phase 2
0.8195 Intermediate Similarity NPD4907 Clinical (unspecified phase)
0.8151 Intermediate Similarity NPD2801 Approved
0.8116 Intermediate Similarity NPD3540 Phase 1
0.8082 Intermediate Similarity NPD1934 Approved
0.8043 Intermediate Similarity NPD3539 Phase 1
0.8041 Intermediate Similarity NPD3882 Suspended
0.8033 Intermediate Similarity NPD3021 Approved
0.8033 Intermediate Similarity NPD3022 Approved
0.7985 Intermediate Similarity NPD4625 Phase 3
0.7941 Intermediate Similarity NPD1558 Phase 1
0.7939 Intermediate Similarity NPD4749 Approved
0.7905 Intermediate Similarity NPD2393 Clinical (unspecified phase)
0.7902 Intermediate Similarity NPD1511 Approved
0.7815 Intermediate Similarity NPD1242 Phase 1
0.7812 Intermediate Similarity NPD5536 Phase 2
0.7808 Intermediate Similarity NPD1653 Approved
0.7803 Intermediate Similarity NPD3600 Clinical (unspecified phase)
0.7794 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.7793 Intermediate Similarity NPD1512 Approved
0.7786 Intermediate Similarity NPD422 Phase 1
0.7778 Intermediate Similarity NPD4357 Discontinued
0.7761 Intermediate Similarity NPD6917 Clinical (unspecified phase)
0.775 Intermediate Similarity NPD940 Approved
0.775 Intermediate Similarity NPD846 Approved
0.7704 Intermediate Similarity NPD2861 Phase 2
0.7697 Intermediate Similarity NPD6234 Discontinued
0.7682 Intermediate Similarity NPD4868 Clinical (unspecified phase)
0.7681 Intermediate Similarity NPD4060 Phase 1
0.7681 Intermediate Similarity NPD3620 Phase 2
0.7681 Intermediate Similarity NPD3619 Clinical (unspecified phase)
0.7677 Intermediate Similarity NPD6167 Clinical (unspecified phase)
0.7677 Intermediate Similarity NPD6168 Clinical (unspecified phase)
0.7677 Intermediate Similarity NPD6166 Phase 2
0.7664 Intermediate Similarity NPD6410 Clinical (unspecified phase)
0.7652 Intermediate Similarity NPD3705 Approved
0.7639 Intermediate Similarity NPD5307 Clinical (unspecified phase)
0.7622 Intermediate Similarity NPD3060 Approved
0.7616 Intermediate Similarity NPD3817 Phase 2
0.7609 Intermediate Similarity NPD2674 Phase 3
0.76 Intermediate Similarity NPD4750 Phase 3
0.76 Intermediate Similarity NPD37 Approved
0.7586 Intermediate Similarity NPD7124 Phase 2
0.7584 Intermediate Similarity NPD4675 Approved
0.7584 Intermediate Similarity NPD4678 Approved
0.7557 Intermediate Similarity NPD1357 Approved
0.7554 Intermediate Similarity NPD1240 Approved
0.7548 Intermediate Similarity NPD6232 Discontinued
0.7532 Intermediate Similarity NPD7054 Approved
0.752 Intermediate Similarity NPD2684 Approved
0.7519 Intermediate Similarity NPD1091 Approved
0.7519 Intermediate Similarity NPD6671 Approved
0.7517 Intermediate Similarity NPD4005 Discontinued
0.7517 Intermediate Similarity NPD2219 Phase 1
0.7516 Intermediate Similarity NPD7975 Clinical (unspecified phase)
0.7484 Intermediate Similarity NPD7074 Phase 3
0.7484 Intermediate Similarity NPD7199 Phase 2
0.7484 Intermediate Similarity NPD7472 Approved
0.7483 Intermediate Similarity NPD7266 Discontinued
0.7481 Intermediate Similarity NPD2922 Phase 1
0.7468 Intermediate Similarity NPD3818 Discontinued
0.7465 Intermediate Similarity NPD1510 Phase 2
0.7451 Intermediate Similarity NPD4966 Approved
0.7451 Intermediate Similarity NPD4965 Approved
0.7451 Intermediate Similarity NPD4967 Phase 2
0.7447 Intermediate Similarity NPD1607 Approved
0.744 Intermediate Similarity NPD290 Approved
0.7432 Intermediate Similarity NPD1940 Clinical (unspecified phase)
0.7429 Intermediate Similarity NPD943 Approved
0.7422 Intermediate Similarity NPD7843 Approved
0.7415 Intermediate Similarity NPD6143 Clinical (unspecified phase)
0.741 Intermediate Similarity NPD3145 Approved
0.741 Intermediate Similarity NPD3144 Approved
0.7405 Intermediate Similarity NPD7473 Discontinued
0.7403 Intermediate Similarity NPD4055 Discovery
0.7395 Intermediate Similarity NPD2933 Approved
0.7395 Intermediate Similarity NPD9296 Approved
0.7395 Intermediate Similarity NPD2934 Approved
0.7394 Intermediate Similarity NPD6111 Discontinued
0.7389 Intermediate Similarity NPD7184 Clinical (unspecified phase)
0.7385 Intermediate Similarity NPD7157 Approved
0.7383 Intermediate Similarity NPD6980 Clinical (unspecified phase)
0.7379 Intermediate Similarity NPD4237 Approved
0.7379 Intermediate Similarity NPD5698 Clinical (unspecified phase)
0.7379 Intermediate Similarity NPD5177 Phase 3
0.7379 Intermediate Similarity NPD4236 Phase 3
0.7376 Intermediate Similarity NPD230 Phase 1
0.7365 Intermediate Similarity NPD4378 Clinical (unspecified phase)
0.7365 Intermediate Similarity NPD7447 Phase 1
0.7361 Intermediate Similarity NPD2029 Clinical (unspecified phase)
0.7358 Intermediate Similarity NPD7228 Approved
0.7353 Intermediate Similarity NPD8651 Approved
0.7351 Intermediate Similarity NPD4380 Phase 2
0.7333 Intermediate Similarity NPD2859 Approved
0.7333 Intermediate Similarity NPD2860 Approved
0.7329 Intermediate Similarity NPD6797 Phase 2
0.732 Intermediate Similarity NPD1465 Phase 2
0.7319 Intermediate Similarity NPD9494 Approved
0.731 Intermediate Similarity NPD970 Clinical (unspecified phase)
0.7297 Intermediate Similarity NPD7213 Phase 3
0.7297 Intermediate Similarity NPD6799 Approved
0.7297 Intermediate Similarity NPD7212 Phase 2
0.7295 Intermediate Similarity NPD3020 Approved
0.7292 Intermediate Similarity NPD6100 Approved
0.7292 Intermediate Similarity NPD6099 Approved
0.7292 Intermediate Similarity NPD2935 Discontinued
0.7286 Intermediate Similarity NPD5110 Phase 2
0.7286 Intermediate Similarity NPD5111 Phase 2
0.7286 Intermediate Similarity NPD5109 Approved
0.7284 Intermediate Similarity NPD7251 Discontinued
0.7266 Intermediate Similarity NPD5752 Clinical (unspecified phase)
0.726 Intermediate Similarity NPD6674 Discontinued
0.726 Intermediate Similarity NPD1652 Phase 2
0.7256 Intermediate Similarity NPD8054 Approved
0.7256 Intermediate Similarity NPD8053 Approved
0.7248 Intermediate Similarity NPD4123 Phase 3
0.7246 Intermediate Similarity NPD6584 Phase 3
0.7241 Intermediate Similarity NPD1550 Clinical (unspecified phase)
0.7241 Intermediate Similarity NPD1552 Clinical (unspecified phase)
0.7239 Intermediate Similarity NPD7808 Phase 3
0.7239 Intermediate Similarity NPD4626 Approved
0.7239 Intermediate Similarity NPD4338 Clinical (unspecified phase)
0.7222 Intermediate Similarity NPD968 Approved
0.7214 Intermediate Similarity NPD7095 Approved
0.7211 Intermediate Similarity NPD3750 Approved
0.7211 Intermediate Similarity NPD3892 Phase 2
0.7208 Intermediate Similarity NPD2978 Approved
0.7208 Intermediate Similarity NPD2977 Approved
0.7205 Intermediate Similarity NPD5844 Phase 1
0.7192 Intermediate Similarity NPD1549 Phase 2
0.719 Intermediate Similarity NPD5090 Approved
0.719 Intermediate Similarity NPD5089 Approved
0.7188 Intermediate Similarity NPD5451 Approved
0.7183 Intermediate Similarity NPD2238 Phase 2
0.7179 Intermediate Similarity NPD7075 Discontinued
0.7171 Intermediate Similarity NPD6055 Clinical (unspecified phase)
0.7163 Intermediate Similarity NPD5718 Phase 2
0.7163 Intermediate Similarity NPD6798 Discontinued
0.7162 Intermediate Similarity NPD2677 Approved
0.7162 Intermediate Similarity NPD6190 Approved
0.7161 Intermediate Similarity NPD6374 Clinical (unspecified phase)
0.7153 Intermediate Similarity NPD4536 Approved
0.7153 Intermediate Similarity NPD4538 Approved
0.7153 Intermediate Similarity NPD4537 Clinical (unspecified phase)
0.7143 Intermediate Similarity NPD4162 Approved
0.7133 Intermediate Similarity NPD5123 Clinical (unspecified phase)
0.7133 Intermediate Similarity NPD5124 Phase 1
0.7133 Intermediate Similarity NPD6355 Discontinued
0.7133 Intermediate Similarity NPD1424 Approved
0.7121 Intermediate Similarity NPD709 Approved
0.7117 Intermediate Similarity NPD7993 Clinical (unspecified phase)
0.7115 Intermediate Similarity NPD6788 Approved
0.7111 Intermediate Similarity NPD6516 Phase 2
0.7111 Intermediate Similarity NPD5846 Approved
0.7103 Intermediate Similarity NPD6028 Clinical (unspecified phase)
0.7103 Intermediate Similarity NPD6029 Clinical (unspecified phase)
0.7097 Intermediate Similarity NPD7096 Clinical (unspecified phase)
0.7095 Intermediate Similarity NPD6398 Clinical (unspecified phase)
0.7089 Intermediate Similarity NPD5494 Approved
0.7086 Intermediate Similarity NPD5261 Clinical (unspecified phase)
0.7083 Intermediate Similarity NPD4097 Suspended
0.708 Intermediate Similarity NPD2233 Approved
0.708 Intermediate Similarity NPD2232 Approved
0.708 Intermediate Similarity NPD2230 Approved
0.707 Intermediate Similarity NPD4381 Clinical (unspecified phase)
0.7067 Intermediate Similarity NPD5297 Approved
0.7059 Intermediate Similarity NPD3847 Discontinued
0.7059 Intermediate Similarity NPD3496 Discontinued
0.7059 Intermediate Similarity NPD7261 Clinical (unspecified phase)
0.7055 Intermediate Similarity NPD1551 Phase 2
0.7055 Intermediate Similarity NPD2796 Approved
0.7049 Intermediate Similarity NPD844 Approved
0.7047 Intermediate Similarity NPD5241 Discontinued
0.704 Intermediate Similarity NPD291 Approved
0.7034 Intermediate Similarity NPD6895 Approved
0.7034 Intermediate Similarity NPD6896 Approved
0.703 Intermediate Similarity NPD7549 Discontinued
0.7029 Intermediate Similarity NPD6582 Phase 2
0.7029 Intermediate Similarity NPD6583 Phase 3
0.7023 Intermediate Similarity NPD5535 Approved
0.702 Intermediate Similarity NPD7410 Clinical (unspecified phase)
0.7014 Intermediate Similarity NPD4340 Discontinued
0.7014 Intermediate Similarity NPD447 Suspended
0.7013 Intermediate Similarity NPD6599 Discontinued
0.7007 Intermediate Similarity NPD1375 Discontinued
0.7007 Intermediate Similarity NPD5762 Approved

Structure

External Identifiers

PubChem CID   10041439
ChEMBL   CHEMBL462910
ZINC  

Physicochemical Properties

Molecular Weight:  316.13
ALogP:  -0.287
MLogP:  2.89
XLogP:  2.637
# Rotatable Bonds:  11
Polar Surface Area:  68.15
# H-Bond Aceptor:  0
# H-Bond Donor:  2
# Rings:  2
# Heavy Atoms:  23

Download Data

Data Type Select
General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs