Natural Product: NPC287068

Natural Product ID:  NPC287068
Common Name:   (-)-Gynuraone
IUPAC Name:   (2R,3R)-3,5-dihydroxy-2-methyl-2,3-dihydrochromen-4-one
Synonyms:   (-)-Gynuraone
Molecular Formula:   C10H10O4
Standard InCHIKey:  COBAEYCUCRUGRP-MLUIRONXSA-N
Standard InCHI:  InChI=1S/C10H10O4/c1-5-9(12)10(13)8-6(11)3-2-4-7(8)14-5/h2-5,9,11-12H,1H3/t5-,9-/m1/s1
Canonical SMILES:  C[C@H]1Oc2cccc(c2C(=O)[C@@H]1O)O
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO33247 microdiplodia sp. Species Botryosphaeriaceae Eukaryota PMID[21244021]
NPO13501 Gynura segetum Species Asteraceae Eukaryota TCM_Taiwan*
NPO30809 Microdiplodia Genus Botryosphaeriaceae Eukaryota PMID[21244021]
NPO13501 Gynura segetum Species Asteraceae Eukaryota UNPD*
NPO13501 Gynura segetum Species Asteraceae Eukaryota TCMID*

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT1465 Organism Legionella pneumophila Legionella pneumophila MIC = 1000 ug/ml 21244021

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC287068 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9559 High Similarity NPC150023
0.9357 High Similarity NPC3779
0.9357 High Similarity NPC476182
0.9357 High Similarity NPC211466
0.9357 High Similarity NPC40086
0.9357 High Similarity NPC44721
0.9357 High Similarity NPC176869
0.9357 High Similarity NPC122828
0.9353 High Similarity NPC49130
0.9353 High Similarity NPC4152
0.9353 High Similarity NPC279417
0.9353 High Similarity NPC208176
0.9353 High Similarity NPC142731
0.9353 High Similarity NPC62290
0.9353 High Similarity NPC306607
0.9353 High Similarity NPC326506
0.9286 High Similarity NPC148011
0.9286 High Similarity NPC1940
0.9155 High Similarity NPC218569
0.9097 High Similarity NPC262039
0.9097 High Similarity NPC278476
0.9097 High Similarity NPC262038
0.9097 High Similarity NPC254412
0.9097 High Similarity NPC319910
0.9085 High Similarity NPC472918
0.9085 High Similarity NPC21835
0.9058 High Similarity NPC268691
0.9051 High Similarity NPC121243
0.9051 High Similarity NPC240147
0.9037 High Similarity NPC128216
0.9034 High Similarity NPC171651
0.9034 High Similarity NPC216035
0.9034 High Similarity NPC35567
0.9034 High Similarity NPC217149
0.9034 High Similarity NPC243171
0.9034 High Similarity NPC138288
0.9028 High Similarity NPC105136
0.9021 High Similarity NPC191634
0.9014 High Similarity NPC229190
0.8993 High Similarity NPC471697
0.8973 High Similarity NPC293286
0.8971 High Similarity NPC223457
0.8958 High Similarity NPC477941
0.8958 High Similarity NPC277032
0.8951 High Similarity NPC91902
0.8951 High Similarity NPC47388
0.8951 High Similarity NPC470670
0.8951 High Similarity NPC23084
0.8951 High Similarity NPC473133
0.8951 High Similarity NPC85773
0.8944 High Similarity NPC297788
0.8936 High Similarity NPC476164
0.8936 High Similarity NPC476310
0.8912 High Similarity NPC304207
0.8912 High Similarity NPC259710
0.8912 High Similarity NPC217706
0.8912 High Similarity NPC111341
0.8912 High Similarity NPC304745
0.8912 High Similarity NPC48579
0.8912 High Similarity NPC207809
0.8905 High Similarity NPC248872
0.8904 High Similarity NPC61506
0.8904 High Similarity NPC253904
0.8904 High Similarity NPC260491
0.8904 High Similarity NPC321363
0.8904 High Similarity NPC275878
0.8904 High Similarity NPC246162
0.8904 High Similarity NPC240476
0.8904 High Similarity NPC36835
0.8904 High Similarity NPC9743
0.8897 High Similarity NPC267117
0.8889 High Similarity NPC199335
0.8889 High Similarity NPC10097
0.8881 High Similarity NPC187907
0.8873 High Similarity NPC242100
0.8873 High Similarity NPC255133
0.8857 High Similarity NPC152042
0.8857 High Similarity NPC222342
0.8857 High Similarity NPC150648
0.8857 High Similarity NPC310135
0.8857 High Similarity NPC265871
0.8857 High Similarity NPC20709
0.8857 High Similarity NPC274784
0.8857 High Similarity NPC241838
0.8857 High Similarity NPC143799
0.8857 High Similarity NPC329203
0.8857 High Similarity NPC225153
0.8851 High Similarity NPC13858
0.8851 High Similarity NPC326037
0.8851 High Similarity NPC215917
0.8851 High Similarity NPC10754
0.8851 High Similarity NPC320825
0.8851 High Similarity NPC20530
0.8849 High Similarity NPC243083
0.8849 High Similarity NPC295261
0.8849 High Similarity NPC107586
0.8849 High Similarity NPC13768
0.8849 High Similarity NPC296490
0.8849 High Similarity NPC287246
0.8849 High Similarity NPC79943
0.8849 High Similarity NPC32441
0.8849 High Similarity NPC12296
0.8844 High Similarity NPC27532
0.8844 High Similarity NPC180301
0.8844 High Similarity NPC268193
0.8844 High Similarity NPC246328
0.8844 High Similarity NPC256346
0.8844 High Similarity NPC203080
0.8844 High Similarity NPC248793
0.8844 High Similarity NPC20907
0.8844 High Similarity NPC301233
0.8844 High Similarity NPC244250
0.8844 High Similarity NPC325028
0.8836 High Similarity NPC244577
0.8836 High Similarity NPC471676
0.8836 High Similarity NPC263384
0.8836 High Similarity NPC207346
0.8836 High Similarity NPC472420
0.8836 High Similarity NPC471229
0.8836 High Similarity NPC472422
0.8836 High Similarity NPC46564
0.8836 High Similarity NPC295650
0.8836 High Similarity NPC471677
0.8828 High Similarity NPC307052
0.8828 High Similarity NPC472628
0.8828 High Similarity NPC139966
0.8824 High Similarity NPC475589
0.8824 High Similarity NPC31872
0.8824 High Similarity NPC473584
0.8819 High Similarity NPC202494
0.8819 High Similarity NPC218685
0.8819 High Similarity NPC472627
0.8803 High Similarity NPC130206
0.8803 High Similarity NPC162476
0.8794 High Similarity NPC230285
0.8794 High Similarity NPC184536
0.8794 High Similarity NPC281207
0.8794 High Similarity NPC103342
0.8794 High Similarity NPC269652
0.8794 High Similarity NPC103904
0.8794 High Similarity NPC6407
0.8794 High Similarity NPC110228
0.8794 High Similarity NPC59951
0.8794 High Similarity NPC146679
0.8794 High Similarity NPC188243
0.8792 High Similarity NPC52530
0.8792 High Similarity NPC6985
0.8792 High Similarity NPC108831
0.8792 High Similarity NPC182634
0.8786 High Similarity NPC280284
0.8786 High Similarity NPC188947
0.8786 High Similarity NPC472460
0.8786 High Similarity NPC99333
0.8786 High Similarity NPC329225
0.8786 High Similarity NPC147686
0.8784 High Similarity NPC473241
0.8784 High Similarity NPC326910
0.8784 High Similarity NPC237560
0.8777 High Similarity NPC187432
0.8777 High Similarity NPC470397
0.8777 High Similarity NPC116775
0.8777 High Similarity NPC256042
0.8777 High Similarity NPC216361
0.8777 High Similarity NPC281917
0.8776 High Similarity NPC150123
0.8776 High Similarity NPC10807
0.8776 High Similarity NPC56232
0.8776 High Similarity NPC161881
0.8776 High Similarity NPC244583
0.8776 High Similarity NPC19721
0.8776 High Similarity NPC475790
0.8776 High Similarity NPC210597
0.8767 High Similarity NPC477240
0.8767 High Similarity NPC214454
0.8767 High Similarity NPC106025
0.8767 High Similarity NPC191154
0.8767 High Similarity NPC116822
0.8759 High Similarity NPC25937
0.8759 High Similarity NPC203817
0.875 High Similarity NPC270369
0.875 High Similarity NPC472629
0.875 High Similarity NPC137264
0.875 High Similarity NPC5515
0.875 High Similarity NPC474302
0.8741 High Similarity NPC18886
0.8741 High Similarity NPC10302
0.8741 High Similarity NPC105381
0.8741 High Similarity NPC197425
0.8733 High Similarity NPC41121
0.8733 High Similarity NPC111929
0.8733 High Similarity NPC472459
0.8733 High Similarity NPC320283
0.8733 High Similarity NPC22192
0.8732 High Similarity NPC312391
0.8732 High Similarity NPC262094
0.8732 High Similarity NPC136840
0.8732 High Similarity NPC324386
0.8732 High Similarity NPC213322
0.8732 High Similarity NPC90582
0.8732 High Similarity NPC4743

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC287068 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8849 High Similarity NPD1550 Clinical (unspecified phase)
0.8849 High Similarity NPD1552 Clinical (unspecified phase)
0.8786 High Similarity NPD1549 Phase 2
0.869 High Similarity NPD5403 Approved
0.8681 High Similarity NPD5401 Approved
0.8649 High Similarity NPD1934 Approved
0.8611 High Similarity NPD6799 Approved
0.8552 High Similarity NPD4378 Clinical (unspecified phase)
0.8543 High Similarity NPD7075 Discontinued
0.8514 High Similarity NPD4380 Phase 2
0.8493 Intermediate Similarity NPD1512 Approved
0.8467 Intermediate Similarity NPD2393 Clinical (unspecified phase)
0.8467 Intermediate Similarity NPD7096 Clinical (unspecified phase)
0.8452 Intermediate Similarity NPD6168 Clinical (unspecified phase)
0.8452 Intermediate Similarity NPD6166 Phase 2
0.8452 Intermediate Similarity NPD6167 Clinical (unspecified phase)
0.8421 Intermediate Similarity NPD4381 Clinical (unspecified phase)
0.8417 Intermediate Similarity NPD1240 Approved
0.8411 Intermediate Similarity NPD5402 Approved
0.84 Intermediate Similarity NPD6801 Discontinued
0.838 Intermediate Similarity NPD1551 Phase 2
0.8356 Intermediate Similarity NPD1511 Approved
0.8355 Intermediate Similarity NPD3882 Suspended
0.831 Intermediate Similarity NPD1510 Phase 2
0.8298 Intermediate Similarity NPD1607 Approved
0.8291 Intermediate Similarity NPD7804 Clinical (unspecified phase)
0.8276 Intermediate Similarity NPD1878 Clinical (unspecified phase)
0.8267 Intermediate Similarity NPD6599 Discontinued
0.8224 Intermediate Similarity NPD2801 Approved
0.8187 Intermediate Similarity NPD6797 Phase 2
0.817 Intermediate Similarity NPD3817 Phase 2
0.8137 Intermediate Similarity NPD7251 Discontinued
0.8125 Intermediate Similarity NPD2796 Approved
0.8088 Intermediate Similarity NPD9717 Approved
0.8086 Intermediate Similarity NPD7808 Phase 3
0.8063 Intermediate Similarity NPD7054 Approved
0.8052 Intermediate Similarity NPD8443 Clinical (unspecified phase)
0.8043 Intermediate Similarity NPD1203 Approved
0.8015 Intermediate Similarity NPD1547 Clinical (unspecified phase)
0.8014 Intermediate Similarity NPD970 Clinical (unspecified phase)
0.8012 Intermediate Similarity NPD7074 Phase 3
0.8012 Intermediate Similarity NPD7472 Approved
0.7975 Intermediate Similarity NPD4338 Clinical (unspecified phase)
0.7974 Intermediate Similarity NPD7411 Suspended
0.7933 Intermediate Similarity NPD7410 Clinical (unspecified phase)
0.7914 Intermediate Similarity NPD6559 Discontinued
0.7888 Intermediate Similarity NPD3818 Discontinued
0.7847 Intermediate Similarity NPD447 Suspended
0.7838 Intermediate Similarity NPD2800 Approved
0.7785 Intermediate Similarity NPD3750 Approved
0.7778 Intermediate Similarity NPD1613 Approved
0.7778 Intermediate Similarity NPD1612 Clinical (unspecified phase)
0.7771 Intermediate Similarity NPD4868 Clinical (unspecified phase)
0.7762 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.7756 Intermediate Similarity NPD7819 Suspended
0.7754 Intermediate Similarity NPD1091 Approved
0.7754 Intermediate Similarity NPD422 Phase 1
0.7746 Intermediate Similarity NPD6832 Phase 2
0.773 Intermediate Similarity NPD1019 Discontinued
0.7718 Intermediate Similarity NPD1652 Phase 2
0.7704 Intermediate Similarity NPD9493 Approved
0.7688 Intermediate Similarity NPD6959 Discontinued
0.7667 Intermediate Similarity NPD4628 Phase 3
0.7658 Intermediate Similarity NPD7768 Phase 2
0.7636 Intermediate Similarity NPD7993 Clinical (unspecified phase)
0.7625 Intermediate Similarity NPD5494 Approved
0.7603 Intermediate Similarity NPD1933 Approved
0.7597 Intermediate Similarity NPD920 Approved
0.7591 Intermediate Similarity NPD1548 Phase 1
0.7578 Intermediate Similarity NPD1247 Approved
0.7562 Intermediate Similarity NPD919 Approved
0.7561 Intermediate Similarity NPD3751 Discontinued
0.7557 Intermediate Similarity NPD290 Approved
0.7551 Intermediate Similarity NPD6651 Approved
0.7546 Intermediate Similarity NPD7852 Clinical (unspecified phase)
0.7517 Intermediate Similarity NPD6798 Discontinued
0.7517 Intermediate Similarity NPD2935 Discontinued
0.7517 Intermediate Similarity NPD2313 Discontinued
0.7517 Intermediate Similarity NPD411 Approved
0.75 Intermediate Similarity NPD1529 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD1610 Phase 2
0.75 Intermediate Similarity NPD3749 Approved
0.7483 Intermediate Similarity NPD1243 Approved
0.7483 Intermediate Similarity NPD230 Phase 1
0.7483 Intermediate Similarity NPD7421 Clinical (unspecified phase)
0.7483 Intermediate Similarity NPD1899 Clinical (unspecified phase)
0.7481 Intermediate Similarity NPD1241 Discontinued
0.7468 Intermediate Similarity NPD2532 Approved
0.7468 Intermediate Similarity NPD4661 Approved
0.7468 Intermediate Similarity NPD642 Clinical (unspecified phase)
0.7468 Intermediate Similarity NPD2534 Approved
0.7468 Intermediate Similarity NPD2533 Approved
0.7468 Intermediate Similarity NPD4662 Approved
0.7466 Intermediate Similarity NPD6233 Phase 2
0.7451 Intermediate Similarity NPD643 Clinical (unspecified phase)
0.745 Intermediate Similarity NPD7033 Discontinued
0.745 Intermediate Similarity NPD3748 Approved
0.745 Intermediate Similarity NPD651 Clinical (unspecified phase)
0.7439 Intermediate Similarity NPD7784 Clinical (unspecified phase)
0.7434 Intermediate Similarity NPD6398 Clinical (unspecified phase)
0.7431 Intermediate Similarity NPD1530 Clinical (unspecified phase)
0.7423 Intermediate Similarity NPD3787 Discontinued
0.7417 Intermediate Similarity NPD2424 Discontinued
0.7415 Intermediate Similarity NPD943 Approved
0.741 Intermediate Similarity NPD5844 Phase 1
0.74 Intermediate Similarity NPD6100 Approved
0.74 Intermediate Similarity NPD6099 Approved
0.7379 Intermediate Similarity NPD4908 Phase 1
0.7365 Intermediate Similarity NPD5124 Phase 1
0.7365 Intermediate Similarity NPD5123 Clinical (unspecified phase)
0.7365 Intermediate Similarity NPD6355 Discontinued
0.7361 Intermediate Similarity NPD5647 Approved
0.7351 Intermediate Similarity NPD2346 Discontinued
0.7351 Intermediate Similarity NPD2344 Approved
0.7338 Intermediate Similarity NPD9545 Approved
0.7333 Intermediate Similarity NPD2799 Discontinued
0.733 Intermediate Similarity NPD8090 Clinical (unspecified phase)
0.7329 Intermediate Similarity NPD3027 Phase 3
0.7325 Intermediate Similarity NPD1653 Approved
0.7317 Intermediate Similarity NPD6232 Discontinued
0.7312 Intermediate Similarity NPD1465 Phase 2
0.7305 Intermediate Similarity NPD7286 Phase 2
0.7299 Intermediate Similarity NPD7879 Clinical (unspecified phase)
0.7294 Intermediate Similarity NPD8312 Approved
0.7294 Intermediate Similarity NPD8313 Approved
0.7292 Intermediate Similarity NPD2797 Approved
0.7289 Intermediate Similarity NPD7473 Discontinued
0.7279 Intermediate Similarity NPD3268 Approved
0.7279 Intermediate Similarity NPD4907 Clinical (unspecified phase)
0.7279 Intermediate Similarity NPD1296 Phase 2
0.7278 Intermediate Similarity NPD3226 Approved
0.7273 Intermediate Similarity NPD3926 Phase 2
0.7255 Intermediate Similarity NPD2654 Approved
0.725 Intermediate Similarity NPD6844 Discontinued
0.7241 Intermediate Similarity NPD2798 Approved
0.7235 Intermediate Similarity NPD4419 Clinical (unspecified phase)
0.723 Intermediate Similarity NPD4062 Phase 3
0.7222 Intermediate Similarity NPD3225 Approved
0.7219 Intermediate Similarity NPD4308 Phase 3
0.7219 Intermediate Similarity NPD5953 Discontinued
0.7188 Intermediate Similarity NPD7615 Clinical (unspecified phase)
0.7162 Intermediate Similarity NPD6410 Clinical (unspecified phase)
0.7161 Intermediate Similarity NPD2309 Approved
0.7153 Intermediate Similarity NPD4749 Approved
0.7134 Intermediate Similarity NPD7004 Clinical (unspecified phase)
0.7126 Intermediate Similarity NPD2403 Approved
0.7124 Intermediate Similarity NPD6004 Phase 3
0.7124 Intermediate Similarity NPD6002 Phase 3
0.7124 Intermediate Similarity NPD6003 Clinical (unspecified phase)
0.7124 Intermediate Similarity NPD6005 Phase 3
0.7124 Intermediate Similarity NPD6006 Clinical (unspecified phase)
0.7119 Intermediate Similarity NPD4360 Phase 2
0.7119 Intermediate Similarity NPD4363 Phase 3
0.7111 Intermediate Similarity NPD9266 Approved
0.7111 Intermediate Similarity NPD74 Approved
0.7083 Intermediate Similarity NPD1481 Phase 2
0.7083 Intermediate Similarity NPD1608 Approved
0.7075 Intermediate Similarity NPD9494 Approved
0.7069 Intermediate Similarity NPD8434 Phase 2
0.7063 Intermediate Similarity NPD5808 Clinical (unspecified phase)
0.7055 Intermediate Similarity NPD3266 Approved
0.7055 Intermediate Similarity NPD3267 Approved
0.7051 Intermediate Similarity NPD2354 Approved
0.7037 Intermediate Similarity NPD9263 Approved
0.7037 Intermediate Similarity NPD9264 Approved
0.7037 Intermediate Similarity NPD9267 Approved
0.7027 Intermediate Similarity NPD1008 Clinical (unspecified phase)
0.7024 Intermediate Similarity NPD4575 Clinical (unspecified phase)
0.7017 Intermediate Similarity NPD6778 Approved
0.7017 Intermediate Similarity NPD6782 Approved
0.7017 Intermediate Similarity NPD6780 Approved
0.7017 Intermediate Similarity NPD6776 Approved
0.7017 Intermediate Similarity NPD6777 Approved
0.7017 Intermediate Similarity NPD6779 Approved
0.7017 Intermediate Similarity NPD6781 Approved
0.7014 Intermediate Similarity NPD1201 Approved
0.7014 Intermediate Similarity NPD1535 Discovery
0.7013 Intermediate Similarity NPD2343 Clinical (unspecified phase)
0.7006 Intermediate Similarity NPD5711 Approved
0.7006 Intermediate Similarity NPD5710 Approved
0.7 Intermediate Similarity NPD520 Approved
0.6994 Remote Similarity NPD8455 Phase 2
0.6993 Remote Similarity NPD1778 Approved
0.6993 Remote Similarity NPD1509 Clinical (unspecified phase)
0.6985 Remote Similarity NPD2684 Approved
0.6981 Remote Similarity NPD5049 Phase 3
0.698 Remote Similarity NPD4625 Phase 3
0.6977 Remote Similarity NPD6104 Discontinued
0.6974 Remote Similarity NPD6653 Approved
0.6973 Remote Similarity NPD7584 Approved
0.6971 Remote Similarity NPD8150 Discontinued
0.6963 Remote Similarity NPD968 Approved
0.6959 Remote Similarity NPD1729 Discontinued
0.6957 Remote Similarity NPD2651 Approved
0.6957 Remote Similarity NPD2649 Approved
0.6954 Remote Similarity NPD4060 Phase 1
0.6954 Remote Similarity NPD4307 Phase 2
0.695 Remote Similarity NPD405 Clinical (unspecified phase)
0.6944 Remote Similarity NPD3496 Discontinued
0.6943 Remote Similarity NPD6190 Approved

Structure

External Identifiers

PubChem CID   54582272
ChEMBL   CHEMBL1765413
ZINC  

Physicochemical Properties

Molecular Weight:  194.06
ALogP:  -1.4947
MLogP:  2.12
XLogP:  0.636
# Rotatable Bonds:  3
Polar Surface Area:  66.76
# H-Bond Aceptor:  2
# H-Bond Donor:  2
# Rings:  2
# Heavy Atoms:  14

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs