Natural Product: NPC295650

Natural Product ID:  NPC295650
Common Name:   3-O-[(S)-2-Methylbutyroyl]Pinobanksin
IUPAC Name:   [(2R,3R)-5,7-dihydroxy-4-oxo-2-phenyl-2,3-dihydrochromen-3-yl] (2S)-2-methylbutanoate
Synonyms:  
Molecular Formula:   C20H20O6
Standard InCHIKey:  ZDDSHWOLTYMTJG-SYURPWHHSA-N
Standard InCHI:  InChI=1S/C20H20O6/c1-3-11(2)20(24)26-19-17(23)16-14(22)9-13(21)10-15(16)25-18(19)12-7-5-4-6-8-12/h4-11,18-19,21-22H,3H2,1-2H3/t11-,18+,19-/m0/s1
Canonical SMILES:  CC[C@@H](C(=O)O[C@@H]1[C@H](Oc2c(C1=O)c(O)cc(c2)O)c1ccccc1)C
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO32539 chinese propolis Species Rhytismataceae Eukaryota PMID[12027739]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT453 Cell Line HT-1080 Homo sapiens EC50 = 143000 nM 17125236
NPT2 Others Unspecified EC50 = 185000 nM 19716307
NPT2 Others Unspecified EC50 = 78900 nM DrugMatrix in vitro pharmacology data
NPT81 Cell Line A549 Homo sapiens EC50 = 160000 nM 11975483
NPT165 Cell Line HeLa Homo sapiens EC50 = 116000 nM 22401866

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC295650 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9861 High Similarity NPC477941
0.9452 High Similarity NPC3779
0.9452 High Similarity NPC472918
0.9452 High Similarity NPC122828
0.9452 High Similarity NPC211466
0.9452 High Similarity NPC476182
0.9452 High Similarity NPC40086
0.9452 High Similarity NPC44721
0.9452 High Similarity NPC176869
0.9396 High Similarity NPC217149
0.9396 High Similarity NPC216035
0.9379 High Similarity NPC470216
0.9346 High Similarity NPC112418
0.9342 High Similarity NPC104677
0.9333 High Similarity NPC236756
0.9333 High Similarity NPC311579
0.9329 High Similarity NPC262038
0.9329 High Similarity NPC262039
0.9329 High Similarity NPC319910
0.9329 High Similarity NPC254412
0.9329 High Similarity NPC278476
0.9315 High Similarity NPC49130
0.9315 High Similarity NPC4152
0.9315 High Similarity NPC279417
0.9315 High Similarity NPC142731
0.9315 High Similarity NPC326506
0.9315 High Similarity NPC306607
0.9315 High Similarity NPC62290
0.9315 High Similarity NPC208176
0.9306 High Similarity NPC76445
0.9306 High Similarity NPC284550
0.9306 High Similarity NPC6407
0.9306 High Similarity NPC129853
0.9306 High Similarity NPC110228
0.9306 High Similarity NPC188243
0.9286 High Similarity NPC471745
0.9281 High Similarity NPC471744
0.9276 High Similarity NPC108456
0.9272 High Similarity NPC473241
0.9267 High Similarity NPC171651
0.9267 High Similarity NPC243171
0.9267 High Similarity NPC138288
0.9267 High Similarity NPC35567
0.9262 High Similarity NPC105136
0.9252 High Similarity NPC229190
0.9252 High Similarity NPC153758
0.9252 High Similarity NPC148011
0.9252 High Similarity NPC1940
0.9247 High Similarity NPC223812
0.9247 High Similarity NPC85162
0.9247 High Similarity NPC77794
0.9247 High Similarity NPC107177
0.9247 High Similarity NPC81697
0.9247 High Similarity NPC278249
0.9247 High Similarity NPC125894
0.9241 High Similarity NPC90582
0.9241 High Similarity NPC262094
0.9236 High Similarity NPC274784
0.9236 High Similarity NPC20709
0.9236 High Similarity NPC140890
0.9236 High Similarity NPC310135
0.9236 High Similarity NPC329203
0.9236 High Similarity NPC150648
0.9236 High Similarity NPC225153
0.9236 High Similarity NPC265871
0.9236 High Similarity NPC222342
0.9221 High Similarity NPC259957
0.9221 High Similarity NPC159579
0.9221 High Similarity NPC48093
0.9221 High Similarity NPC129217
0.9221 High Similarity NPC85707
0.9221 High Similarity NPC224530
0.9221 High Similarity NPC216496
0.9211 High Similarity NPC215917
0.9211 High Similarity NPC471500
0.9211 High Similarity NPC127406
0.9211 High Similarity NPC10754
0.9211 High Similarity NPC20530
0.9205 High Similarity NPC293286
0.92 High Similarity NPC471229
0.9195 High Similarity NPC277032
0.9195 High Similarity NPC19238
0.9195 High Similarity NPC104236
0.9195 High Similarity NPC164205
0.9195 High Similarity NPC470461
0.9184 High Similarity NPC235217
0.9184 High Similarity NPC473015
0.9184 High Similarity NPC131568
0.9184 High Similarity NPC473014
0.9184 High Similarity NPC311144
0.9184 High Similarity NPC131579
0.9184 High Similarity NPC473013
0.9178 High Similarity NPC37496
0.9178 High Similarity NPC107572
0.9178 High Similarity NPC78
0.9178 High Similarity NPC166482
0.9178 High Similarity NPC40833
0.9178 High Similarity NPC76338
0.9178 High Similarity NPC306829
0.9178 High Similarity NPC76372
0.9178 High Similarity NPC166934
0.9178 High Similarity NPC148757
0.9178 High Similarity NPC125855
0.9178 High Similarity NPC167624
0.9178 High Similarity NPC324436
0.9178 High Similarity NPC1089
0.9178 High Similarity NPC194432
0.9178 High Similarity NPC220998
0.9178 High Similarity NPC32739
0.9178 High Similarity NPC328164
0.9178 High Similarity NPC265040
0.9178 High Similarity NPC227579
0.9178 High Similarity NPC228504
0.9178 High Similarity NPC177354
0.9178 High Similarity NPC223500
0.9178 High Similarity NPC10937
0.9178 High Similarity NPC296917
0.9178 High Similarity NPC64915
0.9178 High Similarity NPC66515
0.9178 High Similarity NPC324134
0.9178 High Similarity NPC182852
0.9178 High Similarity NPC161506
0.9172 High Similarity NPC59951
0.9172 High Similarity NPC103342
0.9172 High Similarity NPC184536
0.9172 High Similarity NPC103904
0.9172 High Similarity NPC230285
0.9172 High Similarity NPC146679
0.9167 High Similarity NPC118813
0.9161 High Similarity NPC27942
0.9156 High Similarity NPC153342
0.915 High Similarity NPC6985
0.915 High Similarity NPC471515
0.915 High Similarity NPC471479
0.915 High Similarity NPC43638
0.9145 High Similarity NPC217706
0.9145 High Similarity NPC304745
0.9145 High Similarity NPC111341
0.9145 High Similarity NPC207809
0.9145 High Similarity NPC304207
0.9145 High Similarity NPC48579
0.9145 High Similarity NPC259710
0.9139 High Similarity NPC210597
0.9133 High Similarity NPC267117
0.9133 High Similarity NPC474735
0.9133 High Similarity NPC180351
0.9128 High Similarity NPC218569
0.9128 High Similarity NPC470460
0.9122 High Similarity NPC178343
0.9122 High Similarity NPC306488
0.9122 High Similarity NPC285630
0.9122 High Similarity NPC299011
0.9122 High Similarity NPC470458
0.9122 High Similarity NPC127059
0.9122 High Similarity NPC472629
0.9122 High Similarity NPC5820
0.9116 High Similarity NPC185276
0.9116 High Similarity NPC91560
0.9116 High Similarity NPC316816
0.9116 High Similarity NPC150408
0.9116 High Similarity NPC75049
0.9116 High Similarity NPC113770
0.9116 High Similarity NPC149026
0.9116 High Similarity NPC158874
0.9116 High Similarity NPC143896
0.9116 High Similarity NPC39329
0.9116 High Similarity NPC214166
0.9116 High Similarity NPC169591
0.9116 High Similarity NPC68104
0.9116 High Similarity NPC221432
0.9116 High Similarity NPC175504
0.9116 High Similarity NPC310130
0.9116 High Similarity NPC257097
0.9116 High Similarity NPC478086
0.9116 High Similarity NPC164980
0.911 High Similarity NPC136840
0.911 High Similarity NPC312391
0.911 High Similarity NPC17170
0.911 High Similarity NPC258630
0.911 High Similarity NPC248372
0.911 High Similarity NPC110038
0.911 High Similarity NPC166689
0.911 High Similarity NPC96408
0.911 High Similarity NPC324386
0.911 High Similarity NPC213322
0.911 High Similarity NPC4743
0.911 High Similarity NPC279650
0.911 High Similarity NPC156190
0.9103 High Similarity NPC121703
0.9103 High Similarity NPC143799
0.9103 High Similarity NPC261234
0.9103 High Similarity NPC241838
0.9103 High Similarity NPC152042
0.9097 High Similarity NPC287246
0.9097 High Similarity NPC13768
0.9097 High Similarity NPC295261
0.9097 High Similarity NPC296490
0.9097 High Similarity NPC79943
0.9097 High Similarity NPC32441
0.9097 High Similarity NPC107586

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC295650 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.9404 High Similarity NPD7075 Discontinued
0.9333 High Similarity NPD7096 Clinical (unspecified phase)
0.9247 High Similarity NPD6799 Approved
0.9139 High Similarity NPD6801 Discontinued
0.9097 High Similarity NPD1552 Clinical (unspecified phase)
0.9097 High Similarity NPD1550 Clinical (unspecified phase)
0.9054 High Similarity NPD4378 Clinical (unspecified phase)
0.9034 High Similarity NPD1549 Phase 2
0.9007 High Similarity NPD6599 Discontinued
0.8896 High Similarity NPD3817 Phase 2
0.8889 High Similarity NPD1934 Approved
0.8831 High Similarity NPD2393 Clinical (unspecified phase)
0.8824 High Similarity NPD7411 Suspended
0.8808 High Similarity NPD5403 Approved
0.8782 High Similarity NPD4381 Clinical (unspecified phase)
0.8758 High Similarity NPD7804 Clinical (unspecified phase)
0.8758 High Similarity NPD4380 Phase 2
0.8688 High Similarity NPD6168 Clinical (unspecified phase)
0.8688 High Similarity NPD6167 Clinical (unspecified phase)
0.8688 High Similarity NPD6166 Phase 2
0.8675 High Similarity NPD5401 Approved
0.8654 High Similarity NPD8443 Clinical (unspecified phase)
0.8639 High Similarity NPD2796 Approved
0.8599 High Similarity NPD3882 Suspended
0.859 High Similarity NPD7819 Suspended
0.8571 High Similarity NPD1510 Phase 2
0.8552 High Similarity NPD1240 Approved
0.8545 High Similarity NPD4338 Clinical (unspecified phase)
0.8537 High Similarity NPD6797 Phase 2
0.8535 High Similarity NPD5402 Approved
0.8497 Intermediate Similarity NPD1512 Approved
0.8485 Intermediate Similarity NPD7251 Discontinued
0.8481 Intermediate Similarity NPD4868 Clinical (unspecified phase)
0.8471 Intermediate Similarity NPD2801 Approved
0.8435 Intermediate Similarity NPD1607 Approved
0.8434 Intermediate Similarity NPD7808 Phase 3
0.8431 Intermediate Similarity NPD7410 Clinical (unspecified phase)
0.8414 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.8366 Intermediate Similarity NPD1511 Approved
0.8364 Intermediate Similarity NPD7074 Phase 3
0.8344 Intermediate Similarity NPD7852 Clinical (unspecified phase)
0.8344 Intermediate Similarity NPD7421 Clinical (unspecified phase)
0.8303 Intermediate Similarity NPD7054 Approved
0.8289 Intermediate Similarity NPD3750 Approved
0.8278 Intermediate Similarity NPD970 Clinical (unspecified phase)
0.8267 Intermediate Similarity NPD1551 Phase 2
0.8253 Intermediate Similarity NPD7472 Approved
0.825 Intermediate Similarity NPD7768 Phase 2
0.8242 Intermediate Similarity NPD3818 Discontinued
0.821 Intermediate Similarity NPD5494 Approved
0.8204 Intermediate Similarity NPD7993 Clinical (unspecified phase)
0.8199 Intermediate Similarity NPD3749 Approved
0.8182 Intermediate Similarity NPD7473 Discontinued
0.817 Intermediate Similarity NPD4628 Phase 3
0.8163 Intermediate Similarity NPD6798 Discontinued
0.816 Intermediate Similarity NPD6959 Discontinued
0.8155 Intermediate Similarity NPD6559 Discontinued
0.811 Intermediate Similarity NPD6232 Discontinued
0.8084 Intermediate Similarity NPD5844 Phase 1
0.8037 Intermediate Similarity NPD919 Approved
0.8026 Intermediate Similarity NPD2935 Discontinued
0.8 Intermediate Similarity NPD6355 Discontinued
0.7987 Intermediate Similarity NPD6233 Phase 2
0.7976 Intermediate Similarity NPD7286 Phase 2
0.7975 Intermediate Similarity NPD920 Approved
0.7966 Intermediate Similarity NPD8090 Clinical (unspecified phase)
0.7962 Intermediate Similarity NPD2534 Approved
0.7962 Intermediate Similarity NPD2533 Approved
0.7962 Intermediate Similarity NPD2532 Approved
0.7961 Intermediate Similarity NPD3748 Approved
0.7961 Intermediate Similarity NPD7033 Discontinued
0.7961 Intermediate Similarity NPD2799 Discontinued
0.7945 Intermediate Similarity NPD1203 Approved
0.7935 Intermediate Similarity NPD1878 Clinical (unspecified phase)
0.7919 Intermediate Similarity NPD3268 Approved
0.7905 Intermediate Similarity NPD6832 Phase 2
0.7888 Intermediate Similarity NPD7615 Clinical (unspecified phase)
0.7882 Intermediate Similarity NPD5953 Discontinued
0.7871 Intermediate Similarity NPD2800 Approved
0.7871 Intermediate Similarity NPD1243 Approved
0.7848 Intermediate Similarity NPD642 Clinical (unspecified phase)
0.7841 Intermediate Similarity NPD7879 Clinical (unspecified phase)
0.7834 Intermediate Similarity NPD643 Clinical (unspecified phase)
0.7829 Intermediate Similarity NPD6651 Approved
0.7823 Intermediate Similarity NPD2797 Approved
0.78 Intermediate Similarity NPD2313 Discontinued
0.7798 Intermediate Similarity NPD7784 Clinical (unspecified phase)
0.7793 Intermediate Similarity NPD1547 Clinical (unspecified phase)
0.7791 Intermediate Similarity NPD1465 Phase 2
0.7785 Intermediate Similarity NPD4908 Phase 1
0.7771 Intermediate Similarity NPD3887 Approved
0.7763 Intermediate Similarity NPD1933 Approved
0.7763 Intermediate Similarity NPD5124 Phase 1
0.7763 Intermediate Similarity NPD5123 Clinical (unspecified phase)
0.774 Intermediate Similarity NPD9717 Approved
0.7738 Intermediate Similarity NPD7184 Clinical (unspecified phase)
0.7736 Intermediate Similarity NPD7004 Clinical (unspecified phase)
0.7725 Intermediate Similarity NPD1247 Approved
0.7707 Intermediate Similarity NPD6398 Clinical (unspecified phase)
0.7706 Intermediate Similarity NPD3751 Discontinued
0.7688 Intermediate Similarity NPD4419 Clinical (unspecified phase)
0.7682 Intermediate Similarity NPD4907 Clinical (unspecified phase)
0.7679 Intermediate Similarity NPD3787 Discontinued
0.7677 Intermediate Similarity NPD6100 Approved
0.7677 Intermediate Similarity NPD6099 Approved
0.7671 Intermediate Similarity NPD1610 Phase 2
0.7671 Intermediate Similarity NPD422 Phase 1
0.7658 Intermediate Similarity NPD2354 Approved
0.7654 Intermediate Similarity NPD3226 Approved
0.7643 Intermediate Similarity NPD1652 Phase 2
0.764 Intermediate Similarity NPD6980 Clinical (unspecified phase)
0.7633 Intermediate Similarity NPD3926 Phase 2
0.7632 Intermediate Similarity NPD4062 Phase 3
0.7628 Intermediate Similarity NPD2346 Discontinued
0.7628 Intermediate Similarity NPD2344 Approved
0.7614 Intermediate Similarity NPD8434 Phase 2
0.7584 Intermediate Similarity NPD3266 Approved
0.7584 Intermediate Similarity NPD3267 Approved
0.7582 Intermediate Similarity NPD1612 Clinical (unspecified phase)
0.7582 Intermediate Similarity NPD4060 Phase 1
0.7582 Intermediate Similarity NPD1613 Approved
0.7556 Intermediate Similarity NPD4360 Phase 2
0.7556 Intermediate Similarity NPD4363 Phase 3
0.7547 Intermediate Similarity NPD6190 Approved
0.7546 Intermediate Similarity NPD7458 Discontinued
0.7543 Intermediate Similarity NPD8313 Approved
0.7543 Intermediate Similarity NPD8312 Approved
0.7533 Intermediate Similarity NPD2798 Approved
0.7532 Intermediate Similarity NPD447 Suspended
0.7532 Intermediate Similarity NPD1899 Clinical (unspecified phase)
0.7532 Intermediate Similarity NPD230 Phase 1
0.7517 Intermediate Similarity NPD3225 Approved
0.7517 Intermediate Similarity NPD1548 Phase 1
0.7517 Intermediate Similarity NPD9545 Approved
0.7516 Intermediate Similarity NPD2355 Clinical (unspecified phase)
0.7516 Intermediate Similarity NPD2353 Approved
0.7515 Intermediate Similarity NPD7199 Phase 2
0.75 Intermediate Similarity NPD1608 Approved
0.75 Intermediate Similarity NPD4308 Phase 3
0.7485 Intermediate Similarity NPD2403 Approved
0.7471 Intermediate Similarity NPD5710 Approved
0.7471 Intermediate Similarity NPD5711 Approved
0.7469 Intermediate Similarity NPD5049 Phase 3
0.7468 Intermediate Similarity NPD943 Approved
0.7458 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.7453 Intermediate Similarity NPD6143 Clinical (unspecified phase)
0.7439 Intermediate Similarity NPD5808 Clinical (unspecified phase)
0.7438 Intermediate Similarity NPD2309 Approved
0.7434 Intermediate Similarity NPD1529 Clinical (unspecified phase)
0.7419 Intermediate Similarity NPD4340 Discontinued
0.7419 Intermediate Similarity NPD7435 Discontinued
0.7417 Intermediate Similarity NPD1019 Discontinued
0.7416 Intermediate Similarity NPD8150 Discontinued
0.741 Intermediate Similarity NPD37 Approved
0.7396 Intermediate Similarity NPD6234 Discontinued
0.7381 Intermediate Similarity NPD4966 Approved
0.7381 Intermediate Similarity NPD4965 Approved
0.7381 Intermediate Similarity NPD4967 Phase 2
0.7379 Intermediate Similarity NPD9493 Approved
0.7368 Intermediate Similarity NPD7229 Phase 3
0.7368 Intermediate Similarity NPD1530 Clinical (unspecified phase)
0.7365 Intermediate Similarity NPD8455 Phase 2
0.7338 Intermediate Similarity NPD1296 Phase 2
0.7325 Intermediate Similarity NPD7097 Phase 1
0.7321 Intermediate Similarity NPD4288 Approved
0.7312 Intermediate Similarity NPD2654 Approved
0.7302 Intermediate Similarity NPD7584 Approved
0.7297 Intermediate Similarity NPD17 Approved
0.7296 Intermediate Similarity NPD2343 Clinical (unspecified phase)
0.7294 Intermediate Similarity NPD5537 Clinical (unspecified phase)
0.7278 Intermediate Similarity NPD1509 Clinical (unspecified phase)
0.7273 Intermediate Similarity NPD1653 Approved
0.7273 Intermediate Similarity NPD3027 Phase 3
0.7273 Intermediate Similarity NPD7095 Approved
0.7267 Intermediate Similarity NPD1481 Phase 2
0.7258 Intermediate Similarity NPD6780 Approved
0.7258 Intermediate Similarity NPD6781 Approved
0.7258 Intermediate Similarity NPD6777 Approved
0.7258 Intermediate Similarity NPD6779 Approved
0.7258 Intermediate Similarity NPD6776 Approved
0.7258 Intermediate Similarity NPD6778 Approved
0.7258 Intermediate Similarity NPD6782 Approved
0.7255 Intermediate Similarity NPD2861 Phase 2
0.725 Intermediate Similarity NPD5958 Discontinued
0.725 Intermediate Similarity NPD4534 Discontinued
0.725 Intermediate Similarity NPD2897 Discontinued
0.7246 Intermediate Similarity NPD5890 Approved
0.7246 Intermediate Similarity NPD5889 Approved
0.7244 Intermediate Similarity NPD4307 Phase 2
0.7239 Intermediate Similarity NPD7390 Discontinued
0.7238 Intermediate Similarity NPD4287 Approved
0.7238 Intermediate Similarity NPD8397 Clinical (unspecified phase)
0.7228 Intermediate Similarity NPD4362 Clinical (unspecified phase)
0.7228 Intermediate Similarity NPD4361 Phase 2
0.7226 Intermediate Similarity NPD411 Approved
0.7226 Intermediate Similarity NPD3764 Approved
0.7219 Intermediate Similarity NPD5353 Approved
0.72 Intermediate Similarity NPD7228 Approved
0.72 Intermediate Similarity NPD1535 Discovery
0.7195 Intermediate Similarity NPD4661 Approved

Structure

External Identifiers

PubChem CID   636686
ChEMBL   CHEMBL464454
ZINC  

Physicochemical Properties

Molecular Weight:  356.13
ALogP:  -1.579
MLogP:  3
XLogP:  3.584
# Rotatable Bonds:  9
Polar Surface Area:  93.06
# H-Bond Aceptor:  3
# H-Bond Donor:  2
# Rings:  3
# Heavy Atoms:  26

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
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Biological Activities  
Similar NPs/Drugs