Natural Product: NPC176586

Natural Product ID:  NPC176586
Common Name:   (3S,4S)-4-(1,3-Benzodioxol-5-Ylmethyl)-3-[(3,4,5-Trimethoxyphenyl)Methyl]Oxolan-2-One
IUPAC Name:   (3S,4S)-4-(1,3-benzodioxol-5-ylmethyl)-3-[(3,4,5-trimethoxyphenyl)methyl]oxolan-2-one
Synonyms:  
Molecular Formula:   C22H24O7
Standard InCHIKey:  GMLDZDDTZKXJLU-CVEARBPZSA-N
Standard InCHI:  InChI=1S/C22H24O7/c1-24-19-9-14(10-20(25-2)21(19)26-3)7-16-15(11-27-22(16)23)6-13-4-5-17-18(8-13)29-12-28-17/h4-5,8-10,15-16H,6-7,11-12H2,1-3H3/t15-,16+/m1/s1
Canonical SMILES:  COc1cc(C[C@@H]2C(=O)OC[C@H]2Cc2ccc3c(c2)OCO3)cc(c1OC)OC
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO28099 Epimedium cremeum Species Berberidaceae Eukaryota UNPD*
NPO28419 Tribolium confusum Species Tenebrionidae Eukaryota UNPD*
NPO27987 Clavelina cylindrica Species Clavelinidae Eukaryota UNPD*

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT561 Organism Tetrahymena pyriformis Tetrahymena pyriformis MIC > 20 ug/ml 1992152
NPT91 Cell Line KB Homo sapiens ED50 = 5.2 ug/ml 1992152
NPT561 Organism Tetrahymena pyriformis Tetrahymena pyriformis MIC < 20 ug/ml 1992152

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC176586 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC210354
0.9853 High Similarity NPC177644
0.9853 High Similarity NPC191158
0.9852 High Similarity NPC151423
0.9852 High Similarity NPC40237
0.9708 High Similarity NPC92693
0.9708 High Similarity NPC475000
0.9708 High Similarity NPC218841
0.9635 High Similarity NPC474288
0.9568 High Similarity NPC193779
0.9552 High Similarity NPC211386
0.9504 High Similarity NPC145569
0.9504 High Similarity NPC216223
0.95 High Similarity NPC104024
0.95 High Similarity NPC80230
0.95 High Similarity NPC101755
0.95 High Similarity NPC65574
0.95 High Similarity NPC304687
0.9407 High Similarity NPC72796
0.9407 High Similarity NPC44245
0.9403 High Similarity NPC205915
0.9366 High Similarity NPC293757
0.9366 High Similarity NPC177476
0.9366 High Similarity NPC262455
0.9366 High Similarity NPC477695
0.9366 High Similarity NPC474965
0.9366 High Similarity NPC668
0.9366 High Similarity NPC477698
0.9366 High Similarity NPC174512
0.9357 High Similarity NPC474158
0.9338 High Similarity NPC11453
0.9306 High Similarity NPC56184
0.9301 High Similarity NPC149505
0.9254 High Similarity NPC192255
0.9236 High Similarity NPC477700
0.9236 High Similarity NPC13985
0.9236 High Similarity NPC210642
0.9236 High Similarity NPC303519
0.9236 High Similarity NPC164082
0.9197 High Similarity NPC143895
0.9191 High Similarity NPC19890
0.9191 High Similarity NPC110958
0.9172 High Similarity NPC477699
0.9161 High Similarity NPC262804
0.9161 High Similarity NPC40654
0.9118 High Similarity NPC266848
0.9118 High Similarity NPC136750
0.9103 High Similarity NPC32079
0.9103 High Similarity NPC474975
0.9078 High Similarity NPC273657
0.9078 High Similarity NPC106920
0.9058 High Similarity NPC209229
0.9048 High Similarity NPC348849
0.9048 High Similarity NPC103197
0.9048 High Similarity NPC273578
0.9048 High Similarity NPC30009
0.9048 High Similarity NPC136757
0.9048 High Similarity NPC178195
0.9044 High Similarity NPC65183
0.9044 High Similarity NPC72046
0.9044 High Similarity NPC261812
0.9021 High Similarity NPC3982
0.9007 High Similarity NPC287124
0.8986 High Similarity NPC189474
0.8955 High Similarity NPC223807
0.8944 High Similarity NPC477696
0.8944 High Similarity NPC470811
0.8944 High Similarity NPC477697
0.8936 High Similarity NPC282291
0.8936 High Similarity NPC166137
0.8926 High Similarity NPC237946
0.8926 High Similarity NPC32373
0.8921 High Similarity NPC102260
0.8921 High Similarity NPC230968
0.8913 High Similarity NPC31530
0.8881 High Similarity NPC141569
0.8881 High Similarity NPC18211
0.8881 High Similarity NPC166884
0.8881 High Similarity NPC477701
0.8874 High Similarity NPC96593
0.8874 High Similarity NPC470637
0.8867 High Similarity NPC163527
0.8867 High Similarity NPC181168
0.8867 High Similarity NPC207584
0.8867 High Similarity NPC115281
0.8867 High Similarity NPC19947
0.8859 High Similarity NPC234730
0.8857 High Similarity NPC185908
0.8857 High Similarity NPC14022
0.8849 High Similarity NPC148893
0.8849 High Similarity NPC49235
0.8849 High Similarity NPC25333
0.8836 High Similarity NPC125570
0.8824 High Similarity NPC476748
0.8819 High Similarity NPC477702
0.8816 High Similarity NPC288149
0.8803 High Similarity NPC162851
0.8803 High Similarity NPC218092
0.8803 High Similarity NPC246474
0.8786 High Similarity NPC121651
0.8776 High Similarity NPC475170
0.8768 High Similarity NPC7744
0.8759 High Similarity NPC87295
0.8759 High Similarity NPC321696
0.8759 High Similarity NPC321958
0.8759 High Similarity NPC212890
0.875 High Similarity NPC119910
0.875 High Similarity NPC165128
0.875 High Similarity NPC268718
0.875 High Similarity NPC143092
0.875 High Similarity NPC474036
0.875 High Similarity NPC222127
0.875 High Similarity NPC226862
0.875 High Similarity NPC150943
0.875 High Similarity NPC158471
0.875 High Similarity NPC57119
0.875 High Similarity NPC91634
0.875 High Similarity NPC15743
0.875 High Similarity NPC82862
0.8725 High Similarity NPC473236
0.8725 High Similarity NPC245948
0.8725 High Similarity NPC308555
0.8723 High Similarity NPC283949
0.8714 High Similarity NPC150534
0.8707 High Similarity NPC85141
0.8705 High Similarity NPC196937
0.8696 High Similarity NPC82111
0.8696 High Similarity NPC227160
0.8693 High Similarity NPC191352
0.8693 High Similarity NPC100465
0.8693 High Similarity NPC209411
0.8693 High Similarity NPC115624
0.8693 High Similarity NPC258322
0.8693 High Similarity NPC239890
0.8693 High Similarity NPC152424
0.869 High Similarity NPC223185
0.869 High Similarity NPC327651
0.869 High Similarity NPC318286
0.8684 High Similarity NPC474043
0.8681 High Similarity NPC218510
0.8681 High Similarity NPC76415
0.8676 High Similarity NPC473093
0.8676 High Similarity NPC8050
0.8676 High Similarity NPC473092
0.8675 High Similarity NPC473900
0.8671 High Similarity NPC312199
0.8662 High Similarity NPC113550
0.8658 High Similarity NPC104353
0.8649 High Similarity NPC158635
0.8649 High Similarity NPC229882
0.8639 High Similarity NPC304821
0.8636 High Similarity NPC76687
0.8636 High Similarity NPC61141
0.8623 High Similarity NPC233224
0.8623 High Similarity NPC271208
0.8621 High Similarity NPC326144
0.8621 High Similarity NPC27159
0.8613 High Similarity NPC281864
0.8613 High Similarity NPC54321
0.8613 High Similarity NPC328682
0.8611 High Similarity NPC253481
0.8611 High Similarity NPC472562
0.8611 High Similarity NPC31751
0.8611 High Similarity NPC46180
0.8611 High Similarity NPC253722
0.8611 High Similarity NPC80326
0.8611 High Similarity NPC52664
0.8609 High Similarity NPC254163
0.8609 High Similarity NPC186316
0.8603 High Similarity NPC285725
0.8603 High Similarity NPC112571
0.8603 High Similarity NPC50683
0.8601 High Similarity NPC56091
0.8601 High Similarity NPC177868
0.8601 High Similarity NPC226547
0.8601 High Similarity NPC103448
0.8601 High Similarity NPC46591
0.8601 High Similarity NPC216434
0.86 High Similarity NPC474514
0.8592 High Similarity NPC166184
0.8591 High Similarity NPC163002
0.8581 High Similarity NPC472567
0.8581 High Similarity NPC116759
0.8581 High Similarity NPC14294
0.8571 High Similarity NPC153620
0.8571 High Similarity NPC1474
0.8571 High Similarity NPC25496
0.8571 High Similarity NPC24257
0.8562 High Similarity NPC325122
0.8553 High Similarity NPC115123
0.8553 High Similarity NPC478055
0.8553 High Similarity NPC301897
0.8553 High Similarity NPC477380
0.8553 High Similarity NPC239113
0.8552 High Similarity NPC255566
0.8552 High Similarity NPC298317
0.8542 High Similarity NPC300798
0.8542 High Similarity NPC58137
0.8542 High Similarity NPC100675
0.8542 High Similarity NPC51681

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC176586 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8926 High Similarity NPD4965 Approved
0.8926 High Similarity NPD4967 Phase 2
0.8926 High Similarity NPD4966 Approved
0.8808 High Similarity NPD6234 Discontinued
0.8725 High Similarity NPD37 Approved
0.8639 High Similarity NPD6980 Clinical (unspecified phase)
0.8571 High Similarity NPD7199 Phase 2
0.8462 Intermediate Similarity NPD7184 Clinical (unspecified phase)
0.8435 Intermediate Similarity NPD6143 Clinical (unspecified phase)
0.8418 Intermediate Similarity NPD7228 Approved
0.821 Intermediate Similarity NPD7240 Approved
0.8102 Intermediate Similarity NPD3705 Approved
0.8061 Intermediate Similarity NPD7090 Clinical (unspecified phase)
0.7847 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.7836 Intermediate Similarity NPD5283 Phase 1
0.7812 Intermediate Similarity NPD5494 Approved
0.7778 Intermediate Similarity NPD3027 Phase 3
0.7748 Intermediate Similarity NPD4109 Clinical (unspecified phase)
0.7748 Intermediate Similarity NPD4110 Phase 3
0.7744 Intermediate Similarity NPD3818 Discontinued
0.7698 Intermediate Similarity NPD17 Approved
0.7673 Intermediate Similarity NPD3817 Phase 2
0.7669 Intermediate Similarity NPD5242 Approved
0.766 Intermediate Similarity NPD2981 Phase 2
0.7625 Intermediate Similarity NPD3882 Suspended
0.7606 Intermediate Similarity NPD2983 Phase 2
0.7606 Intermediate Similarity NPD2982 Phase 2
0.76 Intermediate Similarity NPD2438 Suspended
0.7588 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.7568 Intermediate Similarity NPD6355 Discontinued
0.7535 Intermediate Similarity NPD1608 Approved
0.7532 Intermediate Similarity NPD7028 Phase 2
0.7531 Intermediate Similarity NPD919 Approved
0.7517 Intermediate Similarity NPD3018 Phase 2
0.7516 Intermediate Similarity NPD4868 Clinical (unspecified phase)
0.7514 Intermediate Similarity NPD7237 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD6232 Discontinued
0.75 Intermediate Similarity NPD2979 Phase 3
0.7482 Intermediate Similarity NPD5536 Phase 2
0.747 Intermediate Similarity NPD7473 Discontinued
0.7465 Intermediate Similarity NPD1281 Approved
0.7455 Intermediate Similarity NPD3926 Phase 2
0.7453 Intermediate Similarity NPD5353 Approved
0.745 Intermediate Similarity NPD1933 Approved
0.7444 Intermediate Similarity NPD7680 Approved
0.744 Intermediate Similarity NPD7074 Phase 3
0.7438 Intermediate Similarity NPD1934 Approved
0.7417 Intermediate Similarity NPD3748 Approved
0.7412 Intermediate Similarity NPD4338 Clinical (unspecified phase)
0.7394 Intermediate Similarity NPD7229 Phase 3
0.7391 Intermediate Similarity NPD2801 Approved
0.7389 Intermediate Similarity NPD5006 Approved
0.7389 Intermediate Similarity NPD5005 Approved
0.7381 Intermediate Similarity NPD5844 Phase 1
0.7381 Intermediate Similarity NPD7054 Approved
0.7376 Intermediate Similarity NPD5585 Approved
0.7375 Intermediate Similarity NPD6385 Approved
0.7375 Intermediate Similarity NPD6386 Approved
0.7372 Intermediate Similarity NPD6799 Approved
0.7355 Intermediate Similarity NPD5307 Clinical (unspecified phase)
0.7353 Intermediate Similarity NPD7685 Pre-registration
0.7337 Intermediate Similarity NPD7472 Approved
0.7333 Intermediate Similarity NPD230 Phase 1
0.7312 Intermediate Similarity NPD6599 Discontinued
0.731 Intermediate Similarity NPD1283 Approved
0.7296 Intermediate Similarity NPD1653 Approved
0.729 Intermediate Similarity NPD4628 Phase 3
0.7284 Intermediate Similarity NPD2393 Clinical (unspecified phase)
0.7284 Intermediate Similarity NPD5563 Clinical (unspecified phase)
0.7284 Intermediate Similarity NPD7819 Suspended
0.7278 Intermediate Similarity NPD1940 Clinical (unspecified phase)
0.7273 Intermediate Similarity NPD970 Clinical (unspecified phase)
0.7267 Intermediate Similarity NPD1613 Approved
0.7267 Intermediate Similarity NPD1612 Clinical (unspecified phase)
0.7263 Intermediate Similarity NPD4420 Approved
0.7261 Intermediate Similarity NPD4357 Discontinued
0.7255 Intermediate Similarity NPD2531 Phase 2
0.7255 Intermediate Similarity NPD2796 Approved
0.7254 Intermediate Similarity NPD1357 Approved
0.7254 Intermediate Similarity NPD1651 Approved
0.7251 Intermediate Similarity NPD6559 Discontinued
0.7248 Intermediate Similarity NPD6798 Discontinued
0.723 Intermediate Similarity NPD4908 Phase 1
0.723 Intermediate Similarity NPD1529 Clinical (unspecified phase)
0.7229 Intermediate Similarity NPD1247 Approved
0.7215 Intermediate Similarity NPD7004 Clinical (unspecified phase)
0.7215 Intermediate Similarity NPD3688 Clinical (unspecified phase)
0.7215 Intermediate Similarity NPD2533 Approved
0.7215 Intermediate Similarity NPD3146 Approved
0.7215 Intermediate Similarity NPD2532 Approved
0.7215 Intermediate Similarity NPD2534 Approved
0.7209 Intermediate Similarity NPD7808 Phase 3
0.7208 Intermediate Similarity NPD7266 Discontinued
0.72 Intermediate Similarity NPD8032 Phase 2
0.72 Intermediate Similarity NPD6233 Phase 2
0.7197 Intermediate Similarity NPD7124 Phase 2
0.7193 Intermediate Similarity NPD6797 Phase 2
0.7181 Intermediate Similarity NPD7095 Approved
0.7179 Intermediate Similarity NPD3750 Approved
0.7179 Intermediate Similarity NPD6398 Clinical (unspecified phase)
0.7179 Intermediate Similarity NPD1878 Clinical (unspecified phase)
0.7178 Intermediate Similarity NPD7096 Clinical (unspecified phase)
0.7178 Intermediate Similarity NPD8455 Phase 2
0.7178 Intermediate Similarity NPD1465 Phase 2
0.7162 Intermediate Similarity NPD1530 Clinical (unspecified phase)
0.716 Intermediate Similarity NPD7615 Clinical (unspecified phase)
0.7152 Intermediate Similarity NPD4381 Clinical (unspecified phase)
0.7152 Intermediate Similarity NPD4060 Phase 1
0.7151 Intermediate Similarity NPD7251 Discontinued
0.7143 Intermediate Similarity NPD3266 Approved
0.7143 Intermediate Similarity NPD2797 Approved
0.7143 Intermediate Similarity NPD3267 Approved
0.7134 Intermediate Similarity NPD5084 Clinical (unspecified phase)
0.7134 Intermediate Similarity NPD6190 Approved
0.7133 Intermediate Similarity NPD4907 Clinical (unspecified phase)
0.7133 Intermediate Similarity NPD1296 Phase 2
0.7126 Intermediate Similarity NPD8127 Discontinued
0.7125 Intermediate Similarity NPD920 Approved
0.7123 Intermediate Similarity NPD4379 Clinical (unspecified phase)
0.7123 Intermediate Similarity NPD4359 Approved
0.7122 Intermediate Similarity NPD5535 Approved
0.7103 Intermediate Similarity NPD1610 Phase 2
0.7101 Intermediate Similarity NPD6167 Clinical (unspecified phase)
0.7101 Intermediate Similarity NPD6168 Clinical (unspecified phase)
0.7101 Intermediate Similarity NPD6166 Phase 2
0.7097 Intermediate Similarity NPD6003 Clinical (unspecified phase)
0.7097 Intermediate Similarity NPD6002 Phase 3
0.7097 Intermediate Similarity NPD6004 Phase 3
0.7097 Intermediate Similarity NPD6005 Phase 3
0.7097 Intermediate Similarity NPD6006 Clinical (unspecified phase)
0.7086 Intermediate Similarity NPD4062 Phase 3
0.7083 Intermediate Similarity NPD3787 Discontinued
0.7079 Intermediate Similarity NPD7296 Approved
0.7069 Intermediate Similarity NPD7280 Phase 3
0.7069 Intermediate Similarity NPD7281 Phase 3
0.7063 Intermediate Similarity NPD1894 Discontinued
0.7055 Intermediate Similarity NPD6873 Phase 2
0.7051 Intermediate Similarity NPD5958 Discontinued
0.7048 Intermediate Similarity NPD7075 Discontinued
0.7044 Intermediate Similarity NPD1511 Approved
0.7037 Intermediate Similarity NPD7827 Phase 1
0.7037 Intermediate Similarity NPD7458 Discontinued
0.7037 Intermediate Similarity NPD6055 Clinical (unspecified phase)
0.7034 Intermediate Similarity NPD3847 Discontinued
0.7032 Intermediate Similarity NPD3539 Phase 1
0.7032 Intermediate Similarity NPD2935 Discontinued
0.7032 Intermediate Similarity NPD6099 Approved
0.7032 Intermediate Similarity NPD6100 Approved
0.703 Intermediate Similarity NPD5402 Approved
0.702 Intermediate Similarity NPD3764 Approved
0.702 Intermediate Similarity NPD3268 Approved
0.7014 Intermediate Similarity NPD5691 Approved
0.7013 Intermediate Similarity NPD6111 Discontinued
0.7013 Intermediate Similarity NPD7097 Phase 1
0.7012 Intermediate Similarity NPD6801 Discontinued
0.7012 Intermediate Similarity NPD3384 Approved
0.7012 Intermediate Similarity NPD3383 Approved
0.7012 Intermediate Similarity NPD3382 Approved
0.7007 Intermediate Similarity NPD1358 Approved
0.7006 Intermediate Similarity NPD1243 Approved
0.7006 Intermediate Similarity NPD6674 Discontinued
0.7 Intermediate Similarity NPD6832 Phase 2
0.7 Intermediate Similarity NPD642 Clinical (unspecified phase)
0.6994 Remote Similarity NPD7993 Clinical (unspecified phase)
0.6993 Remote Similarity NPD447 Suspended
0.6988 Remote Similarity NPD7768 Phase 2
0.6988 Remote Similarity NPD5019 Clinical (unspecified phase)
0.6987 Remote Similarity NPD1375 Discontinued
0.6987 Remote Similarity NPD3540 Phase 1
0.6981 Remote Similarity NPD643 Clinical (unspecified phase)
0.6975 Remote Similarity NPD4210 Discontinued
0.6968 Remote Similarity NPD1510 Phase 2
0.6968 Remote Similarity NPD7033 Discontinued
0.6968 Remote Similarity NPD2799 Discontinued
0.6966 Remote Similarity NPD7235 Clinical (unspecified phase)
0.6959 Remote Similarity NPD1876 Approved
0.6957 Remote Similarity NPD7314 Clinical (unspecified phase)
0.6957 Remote Similarity NPD1512 Approved
0.6951 Remote Similarity NPD7411 Suspended
0.6948 Remote Similarity NPD6653 Approved
0.6946 Remote Similarity NPD7975 Clinical (unspecified phase)
0.6946 Remote Similarity NPD6971 Discontinued
0.6943 Remote Similarity NPD4534 Discontinued
0.6934 Remote Similarity NPD3134 Approved
0.6928 Remote Similarity NPD1240 Approved
0.6923 Remote Similarity NPD1551 Phase 2
0.6914 Remote Similarity NPD5403 Approved
0.6908 Remote Similarity NPD5110 Phase 2
0.6908 Remote Similarity NPD5109 Approved
0.6908 Remote Similarity NPD5111 Phase 2
0.6899 Remote Similarity NPD7421 Clinical (unspecified phase)
0.6894 Remote Similarity NPD5401 Approved
0.6894 Remote Similarity NPD4378 Clinical (unspecified phase)
0.689 Remote Similarity NPD4380 Phase 2
0.6883 Remote Similarity NPD4622 Approved
0.6883 Remote Similarity NPD1899 Clinical (unspecified phase)
0.6883 Remote Similarity NPD4618 Approved
0.6882 Remote Similarity NPD7315 Approved
0.6879 Remote Similarity NPD5762 Approved
0.6879 Remote Similarity NPD1550 Clinical (unspecified phase)

Structure

External Identifiers

PubChem CID   10476098
ChEMBL   CHEMBL2021357
ZINC  

Physicochemical Properties

Molecular Weight:  400.15
ALogP:  -0.346
MLogP:  3.11
XLogP:  2.936
# Rotatable Bonds:  10
Polar Surface Area:  72.45
# H-Bond Aceptor:  2
# H-Bond Donor:  0
# Rings:  4
# Heavy Atoms:  29

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
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Biological Activities  
Similar NPs/Drugs