Natural Product: NPC169816

Natural Product ID:  NPC169816
Common Name:   n.a.
IUPAC Name:  
Synonyms:  
Molecular Formula:   C56H88O28
Standard InCHIKey:  PEDAHPLWZVSSRQ-SNKCHRKVSA-N
Standard InCHI:  InChI=1S/C56H88O28/c1-20-7-10-56(74-18-20)21(2)34-28(84-56)12-26-24-6-5-22-11-23(8-9-54(22,3)25(24)13-33(62)55(26,34)4)75-50-43(71)40(68)45(32(17-60)79-50)80-53-48(47(38(66)31(16-59)78-53)82-49-41(69)35(63)27(61)19-73-49)83-52-44(72)46(37(65)30(15-58)77-52)81-51-42(70)39(67)36(64)29(14-57)76-51/h5,20-21,23-32,34-53,57-61,63-72H,6-19H2,1-4H3/t20-,21+,23+,24-,25+,26+,27-,28+,29-,30-,31-,32-,34+,35+,36-,37-,38-,39+,40-,41-,42-,43-,44-,45+,46+,47+,48-,49+,50-,51+,52+,53+,54+,55-,56-/m1/s1
Canonical SMILES:  OC[C@H]1O[C@@H](O[C@H]2CC[C@]3(C(=CC[C@@H]4[C@@H]3CC(=O)[C@]3([C@H]4C[C@H]4[C@@H]3[C@H](C)[C@]3(O4)CC[C@H](CO3)C)C)C2)C)[C@@H]([C@H]([C@H]1O[C@@H]1O[C@H](CO)[C@H]([C@@H]([C@H]1O[C@@H]1O[C@H](CO)[C@H]([C@@H]([C@H]1O)O[C@@H]1O[C@H](CO)[C@H]([C@@H]([C@H]1O)O)O)O)O[C@@H]1OC[C@H]([C@@H]([C@H]1O)O)O)O)O)O
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO12929 Polianthes tuberosa Species Asparagaceae Eukaryota Underground parts PMID[12398537]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT924 Cell Line HSC-2 Homo sapiens IC50 = 1.5 ug/ml 12617583
NPT116 Cell Line HL-60 Homo sapiens IC50 = 5.9 ug/ml 12617583

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC169816 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC305771
1.0 High Similarity NPC15918
1.0 High Similarity NPC94072
0.9911 High Similarity NPC182900
0.9911 High Similarity NPC249553
0.9732 High Similarity NPC161738
0.9652 High Similarity NPC473505
0.9397 High Similarity NPC256983
0.9391 High Similarity NPC476544
0.9391 High Similarity NPC476543
0.9391 High Similarity NPC476545
0.9224 High Similarity NPC475182
0.9153 High Similarity NPC473474
0.9153 High Similarity NPC248202
0.9138 High Similarity NPC475187
0.9123 High Similarity NPC279638
0.9068 High Similarity NPC160084
0.9068 High Similarity NPC476542
0.906 High Similarity NPC476672
0.9052 High Similarity NPC190939
0.9052 High Similarity NPC197003
0.9035 High Similarity NPC477808
0.9018 High Similarity NPC87998
0.9018 High Similarity NPC477811
0.9018 High Similarity NPC222202
0.9018 High Similarity NPC224314
0.9018 High Similarity NPC23808
0.9018 High Similarity NPC269297
0.8983 High Similarity NPC156789
0.8974 High Similarity NPC129393
0.8974 High Similarity NPC108072
0.8966 High Similarity NPC86020
0.8966 High Similarity NPC475632
0.8943 High Similarity NPC475487
0.8943 High Similarity NPC102015
0.8938 High Similarity NPC13193
0.8934 High Similarity NPC241008
0.8929 High Similarity NPC84956
0.8929 High Similarity NPC208383
0.8929 High Similarity NPC475550
0.8929 High Similarity NPC232054
0.8929 High Similarity NPC309278
0.8929 High Similarity NPC244086
0.8929 High Similarity NPC102016
0.8929 High Similarity NPC73243
0.8929 High Similarity NPC475333
0.8929 High Similarity NPC470433
0.8929 High Similarity NPC95051
0.8929 High Similarity NPC300557
0.8929 High Similarity NPC171073
0.8929 High Similarity NPC477809
0.8929 High Similarity NPC249265
0.8929 High Similarity NPC22779
0.8929 High Similarity NPC224098
0.8929 High Similarity NPC150372
0.8929 High Similarity NPC46190
0.8929 High Similarity NPC218571
0.8929 High Similarity NPC248746
0.8929 High Similarity NPC194207
0.8929 High Similarity NPC6806
0.8908 High Similarity NPC228701
0.8879 High Similarity NPC477807
0.8862 High Similarity NPC473519
0.8862 High Similarity NPC473805
0.886 High Similarity NPC244431
0.886 High Similarity NPC31896
0.886 High Similarity NPC474265
0.886 High Similarity NPC210420
0.886 High Similarity NPC263359
0.886 High Similarity NPC210569
0.886 High Similarity NPC32361
0.8843 High Similarity NPC292290
0.8839 High Similarity NPC98696
0.8833 High Similarity NPC476674
0.8824 High Similarity NPC131824
0.8824 High Similarity NPC475431
0.8814 High Similarity NPC308459
0.8793 High Similarity NPC477031
0.8793 High Similarity NPC63609
0.8783 High Similarity NPC79900
0.8772 High Similarity NPC475247
0.8772 High Similarity NPC294129
0.8772 High Similarity NPC477032
0.8772 High Similarity NPC476547
0.8772 High Similarity NPC124677
0.8772 High Similarity NPC477028
0.877 High Similarity NPC69273
0.877 High Similarity NPC168899
0.877 High Similarity NPC293623
0.876 High Similarity NPC476673
0.876 High Similarity NPC104427
0.876 High Similarity NPC47113
0.876 High Similarity NPC174367
0.875 High Similarity NPC230507
0.875 High Similarity NPC161676
0.875 High Similarity NPC113044
0.875 High Similarity NPC470432
0.875 High Similarity NPC305423
0.875 High Similarity NPC14704
0.875 High Similarity NPC94272
0.875 High Similarity NPC283829
0.8739 High Similarity NPC476675
0.872 High Similarity NPC478069
0.8707 High Similarity NPC477810
0.8707 High Similarity NPC167183
0.8707 High Similarity NPC32707
0.8707 High Similarity NPC474557
0.8707 High Similarity NPC165439
0.8707 High Similarity NPC473882
0.8696 High Similarity NPC42171
0.8696 High Similarity NPC308140
0.8684 High Similarity NPC52241
0.8684 High Similarity NPC475317
0.8684 High Similarity NPC247037
0.8684 High Similarity NPC154856
0.8661 High Similarity NPC181845
0.8661 High Similarity NPC210178
0.8655 High Similarity NPC207243
0.8655 High Similarity NPC476670
0.8655 High Similarity NPC198325
0.8655 High Similarity NPC233391
0.8632 High Similarity NPC477030
0.8632 High Similarity NPC477029
0.8621 High Similarity NPC477944
0.8621 High Similarity NPC260665
0.8609 High Similarity NPC470748
0.8596 High Similarity NPC42482
0.8596 High Similarity NPC273002
0.8596 High Similarity NPC92297
0.8596 High Similarity NPC477026
0.8596 High Similarity NPC473817
0.8596 High Similarity NPC246205
0.8596 High Similarity NPC477027
0.8596 High Similarity NPC70204
0.8596 High Similarity NPC306131
0.8596 High Similarity NPC220836
0.8596 High Similarity NPC475670
0.8596 High Similarity NPC94086
0.8596 High Similarity NPC118225
0.8596 High Similarity NPC40440
0.8596 High Similarity NPC233433
0.8583 High Similarity NPC477236
0.8571 High Similarity NPC195560
0.8571 High Similarity NPC229962
0.8559 High Similarity NPC110633
0.8559 High Similarity NPC136768
0.8559 High Similarity NPC148417
0.8547 High Similarity NPC11548
0.8547 High Similarity NPC208832
0.8537 High Similarity NPC2757
0.8534 High Similarity NPC130427
0.8534 High Similarity NPC254255
0.8525 High Similarity NPC277191
0.8525 High Similarity NPC190846
0.8525 High Similarity NPC475194
0.8525 High Similarity NPC130229
0.8522 High Similarity NPC114961
0.8522 High Similarity NPC27551
0.8522 High Similarity NPC141433
0.8512 High Similarity NPC28532
0.8509 High Similarity NPC476541
0.8509 High Similarity NPC476538
0.8509 High Similarity NPC202898
0.8509 High Similarity NPC92890
0.8509 High Similarity NPC476539
0.8509 High Similarity NPC476540
0.8509 High Similarity NPC295389
0.8509 High Similarity NPC295980
0.8509 High Similarity NPC475319
0.85 High Similarity NPC471406
0.85 High Similarity NPC50689
0.8496 Intermediate Similarity NPC63023
0.8496 Intermediate Similarity NPC95243
0.8487 Intermediate Similarity NPC36831
0.8487 Intermediate Similarity NPC470513
0.8487 Intermediate Similarity NPC475357
0.8487 Intermediate Similarity NPC470514
0.8475 Intermediate Similarity NPC161674
0.8475 Intermediate Similarity NPC471384
0.8462 Intermediate Similarity NPC476546
0.8462 Intermediate Similarity NPC251309
0.8462 Intermediate Similarity NPC200944
0.8462 Intermediate Similarity NPC73455
0.8455 Intermediate Similarity NPC470218
0.8455 Intermediate Similarity NPC273962
0.845 Intermediate Similarity NPC79250
0.845 Intermediate Similarity NPC290746
0.8448 Intermediate Similarity NPC197231
0.8443 Intermediate Similarity NPC106589
0.8443 Intermediate Similarity NPC202261
0.8435 Intermediate Similarity NPC302057
0.843 Intermediate Similarity NPC477463
0.8425 Intermediate Similarity NPC477234
0.8417 Intermediate Similarity NPC477464
0.8417 Intermediate Similarity NPC473633
0.8417 Intermediate Similarity NPC207738
0.8417 Intermediate Similarity NPC476085
0.8407 Intermediate Similarity NPC100955
0.8407 Intermediate Similarity NPC121566
0.8403 Intermediate Similarity NPC68175

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC169816 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8421 Intermediate Similarity NPD6412 Phase 2
0.8246 Intermediate Similarity NPD8170 Clinical (unspecified phase)
0.8 Intermediate Similarity NPD8328 Phase 3
0.8 Intermediate Similarity NPD8133 Approved
0.792 Intermediate Similarity NPD6370 Approved
0.7891 Intermediate Similarity NPD7736 Approved
0.7874 Intermediate Similarity NPD7507 Approved
0.7815 Intermediate Similarity NPD8132 Clinical (unspecified phase)
0.7812 Intermediate Similarity NPD8293 Discontinued
0.7805 Intermediate Similarity NPD8295 Clinical (unspecified phase)
0.776 Intermediate Similarity NPD8294 Approved
0.776 Intermediate Similarity NPD8377 Approved
0.776 Intermediate Similarity NPD6054 Approved
0.776 Intermediate Similarity NPD6059 Approved
0.7698 Intermediate Similarity NPD8033 Approved
0.7698 Intermediate Similarity NPD8380 Approved
0.7698 Intermediate Similarity NPD8378 Approved
0.7698 Intermediate Similarity NPD8296 Approved
0.7698 Intermediate Similarity NPD8335 Approved
0.7698 Intermediate Similarity NPD8379 Approved
0.7692 Intermediate Similarity NPD7319 Approved
0.7559 Intermediate Similarity NPD8517 Approved
0.7559 Intermediate Similarity NPD6015 Approved
0.7559 Intermediate Similarity NPD6016 Approved
0.7559 Intermediate Similarity NPD8515 Approved
0.7559 Intermediate Similarity NPD8516 Approved
0.7519 Intermediate Similarity NPD7492 Approved
0.75 Intermediate Similarity NPD5988 Approved
0.7463 Intermediate Similarity NPD8450 Suspended
0.7462 Intermediate Similarity NPD6616 Approved
0.7422 Intermediate Similarity NPD8513 Phase 3
0.7405 Intermediate Similarity NPD7078 Approved
0.7388 Intermediate Similarity NPD8449 Approved
0.7368 Intermediate Similarity NPD8171 Discontinued
0.7339 Intermediate Similarity NPD6882 Approved
0.7339 Intermediate Similarity NPD8297 Approved
0.7323 Intermediate Similarity NPD7327 Approved
0.7323 Intermediate Similarity NPD7328 Approved
0.7308 Intermediate Similarity NPD6067 Discontinued
0.7295 Intermediate Similarity NPD6686 Approved
0.7273 Intermediate Similarity NPD6008 Approved
0.7266 Intermediate Similarity NPD7516 Approved
0.7258 Intermediate Similarity NPD8413 Clinical (unspecified phase)
0.7244 Intermediate Similarity NPD6009 Approved
0.7236 Intermediate Similarity NPD6372 Approved
0.7236 Intermediate Similarity NPD6373 Approved
0.7218 Intermediate Similarity NPD6033 Approved
0.7217 Intermediate Similarity NPD6399 Phase 3
0.7209 Intermediate Similarity NPD6319 Approved
0.7154 Intermediate Similarity NPD7320 Approved
0.7154 Intermediate Similarity NPD7503 Approved
0.7143 Intermediate Similarity NPD4632 Approved
0.7131 Intermediate Similarity NPD6675 Approved
0.7131 Intermediate Similarity NPD5739 Approved
0.7131 Intermediate Similarity NPD6402 Approved
0.7131 Intermediate Similarity NPD7128 Approved
0.712 Intermediate Similarity NPD6649 Approved
0.712 Intermediate Similarity NPD6650 Approved
0.7016 Intermediate Similarity NPD6881 Approved
0.7016 Intermediate Similarity NPD6899 Approved
0.6984 Remote Similarity NPD8130 Phase 1
0.6975 Remote Similarity NPD4755 Approved
0.6964 Remote Similarity NPD4786 Approved
0.6935 Remote Similarity NPD5701 Approved
0.6935 Remote Similarity NPD5697 Approved
0.6905 Remote Similarity NPD7290 Approved
0.6905 Remote Similarity NPD6883 Approved
0.6905 Remote Similarity NPD7102 Approved
0.6905 Remote Similarity NPD4634 Approved
0.686 Remote Similarity NPD4700 Approved
0.686 Remote Similarity NPD5285 Approved
0.686 Remote Similarity NPD4696 Approved
0.686 Remote Similarity NPD5286 Approved
0.685 Remote Similarity NPD6847 Approved
0.685 Remote Similarity NPD6869 Approved
0.685 Remote Similarity NPD6617 Approved
0.6833 Remote Similarity NPD6084 Phase 2
0.6833 Remote Similarity NPD6083 Phase 2
0.6825 Remote Similarity NPD6012 Approved
0.6825 Remote Similarity NPD6013 Approved
0.6825 Remote Similarity NPD6014 Approved
0.681 Remote Similarity NPD5328 Approved
0.6791 Remote Similarity NPD7604 Phase 2
0.6786 Remote Similarity NPD3667 Approved
0.6767 Remote Similarity NPD5983 Phase 2
0.6748 Remote Similarity NPD5225 Approved
0.6748 Remote Similarity NPD5224 Approved
0.6748 Remote Similarity NPD5211 Phase 2
0.6748 Remote Similarity NPD5226 Approved
0.6748 Remote Similarity NPD4633 Approved
0.6746 Remote Similarity NPD6011 Approved
0.6739 Remote Similarity NPD5956 Approved
0.672 Remote Similarity NPD4767 Approved
0.672 Remote Similarity NPD4768 Approved
0.6719 Remote Similarity NPD6401 Clinical (unspecified phase)
0.6718 Remote Similarity NPD7115 Discovery
0.6695 Remote Similarity NPD6079 Approved
0.6694 Remote Similarity NPD5174 Approved
0.6694 Remote Similarity NPD5175 Approved
0.6694 Remote Similarity NPD7902 Approved
0.6691 Remote Similarity NPD6336 Discontinued
0.6667 Remote Similarity NPD4753 Phase 2
0.6667 Remote Similarity NPD5223 Approved
0.6667 Remote Similarity NPD3133 Approved
0.6667 Remote Similarity NPD3666 Approved
0.6667 Remote Similarity NPD6053 Discontinued
0.6667 Remote Similarity NPD3665 Phase 1
0.664 Remote Similarity NPD5141 Approved
0.6639 Remote Similarity NPD5696 Approved
0.6639 Remote Similarity NPD4202 Approved
0.6614 Remote Similarity NPD4730 Approved
0.6614 Remote Similarity NPD4729 Approved
0.6612 Remote Similarity NPD4697 Phase 3
0.6594 Remote Similarity NPD8336 Approved
0.6594 Remote Similarity NPD8337 Approved
0.6583 Remote Similarity NPD7748 Approved
0.6581 Remote Similarity NPD6903 Approved
0.6581 Remote Similarity NPD7513 Clinical (unspecified phase)
0.656 Remote Similarity NPD4754 Approved
0.6555 Remote Similarity NPD8034 Phase 2
0.6555 Remote Similarity NPD8035 Phase 2
0.6552 Remote Similarity NPD7521 Approved
0.6552 Remote Similarity NPD7334 Approved
0.6552 Remote Similarity NPD3618 Phase 1
0.6552 Remote Similarity NPD5330 Approved
0.6552 Remote Similarity NPD6409 Approved
0.6552 Remote Similarity NPD6684 Approved
0.6552 Remote Similarity NPD7146 Approved
0.6529 Remote Similarity NPD6356 Clinical (unspecified phase)
0.6529 Remote Similarity NPD5695 Phase 3
0.6529 Remote Similarity NPD4629 Approved
0.6529 Remote Similarity NPD5210 Approved
0.6522 Remote Similarity NPD8074 Phase 3
0.6519 Remote Similarity NPD6291 Clinical (unspecified phase)
0.6515 Remote Similarity NPD6274 Approved
0.6512 Remote Similarity NPD5248 Approved
0.6512 Remote Similarity NPD5249 Phase 3
0.6512 Remote Similarity NPD5247 Approved
0.6512 Remote Similarity NPD5251 Approved
0.6512 Remote Similarity NPD5250 Approved
0.6504 Remote Similarity NPD7638 Approved
0.6493 Remote Similarity NPD7101 Approved
0.6493 Remote Similarity NPD7100 Approved
0.6484 Remote Similarity NPD5128 Approved
0.6484 Remote Similarity NPD5345 Clinical (unspecified phase)
0.6475 Remote Similarity NPD5220 Clinical (unspecified phase)
0.6475 Remote Similarity NPD5222 Approved
0.6475 Remote Similarity NPD5221 Approved
0.6452 Remote Similarity NPD7640 Approved
0.6452 Remote Similarity NPD7639 Approved
0.6446 Remote Similarity NPD7901 Clinical (unspecified phase)
0.6446 Remote Similarity NPD7900 Approved
0.6423 Remote Similarity NPD5173 Approved
0.6418 Remote Similarity NPD6335 Approved
0.6417 Remote Similarity NPD7515 Phase 2
0.6397 Remote Similarity NPD6909 Approved
0.6397 Remote Similarity NPD6908 Approved
0.6379 Remote Similarity NPD3668 Phase 3
0.6348 Remote Similarity NPD4221 Approved
0.6348 Remote Similarity NPD4223 Phase 3
0.6343 Remote Similarity NPD6317 Approved
0.6336 Remote Similarity NPD5216 Approved
0.6336 Remote Similarity NPD5215 Approved
0.6336 Remote Similarity NPD5217 Approved
0.6325 Remote Similarity NPD5329 Approved
0.6316 Remote Similarity NPD6928 Phase 2
0.6303 Remote Similarity NPD6672 Approved
0.6303 Remote Similarity NPD5737 Approved
0.6296 Remote Similarity NPD6314 Approved
0.6296 Remote Similarity NPD6313 Approved
0.6281 Remote Similarity NPD6411 Approved
0.6281 Remote Similarity NPD5281 Approved
0.6281 Remote Similarity NPD5284 Approved
0.6279 Remote Similarity NPD7899 Clinical (unspecified phase)
0.6271 Remote Similarity NPD6098 Approved
0.626 Remote Similarity NPD5169 Approved
0.626 Remote Similarity NPD5135 Approved
0.626 Remote Similarity NPD5134 Clinical (unspecified phase)
0.625 Remote Similarity NPD6673 Approved
0.625 Remote Similarity NPD3701 Clinical (unspecified phase)
0.625 Remote Similarity NPD6904 Approved
0.625 Remote Similarity NPD6080 Approved
0.6239 Remote Similarity NPD4197 Approved
0.6218 Remote Similarity NPD7524 Approved
0.6212 Remote Similarity NPD5127 Approved
0.6207 Remote Similarity NPD6435 Approved
0.6205 Remote Similarity NPD7799 Discontinued
0.6198 Remote Similarity NPD5207 Approved
0.6187 Remote Similarity NPD7122 Discontinued
0.6186 Remote Similarity NPD7520 Clinical (unspecified phase)
0.6184 Remote Similarity NPD7625 Phase 1
0.6183 Remote Similarity NPD4061 Clinical (unspecified phase)
0.6181 Remote Similarity NPD8338 Approved
0.6179 Remote Similarity NPD6001 Approved
0.6179 Remote Similarity NPD5282 Discontinued
0.6161 Remote Similarity NPD7339 Approved
0.6161 Remote Similarity NPD6942 Approved
0.6159 Remote Similarity NPD8266 Approved
0.6159 Remote Similarity NPD8267 Approved
0.6159 Remote Similarity NPD8268 Approved

Structure

External Identifiers

PubChem CID   11136994
ChEMBL   CHEMBL500245
ZINC  

Physicochemical Properties

Molecular Weight:  1208.55
ALogP:  -8.4937
MLogP:  4.54
XLogP:  -4.311
# Rotatable Bonds:  33
Polar Surface Area:  431.28
# H-Bond Aceptor:  28
# H-Bond Donor:  15
# Rings:  11
# Heavy Atoms:  84

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
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Biological Activities  
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