Natural Product ID:   | NPC117572 |
Common Name:   | Icosapent |
IUPAC Name:   | (5Z,8Z,11Z,14Z,17Z)-icosa-5,8,11,14,17-pentaenoic acid |
Synonyms:   | eicosapentaenoic acid; Icosapent; Omega-3 marine triglycerides |
Molecular Formula:   | C20H30O2 |
Standard InCHIKey:   | JAZBEHYOTPTENJ-JLNKQSITSA-N |
Standard InCHI:   | InChI=1S/C20H30O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20(21)22/h3-4,6-7,9-10,12-13,15-16H,2,5,8,11,14,17-19H2,1H3,(H,21,22)/b4-3-,7-6-,10-9-,13-12-,16-15- |
Canonical SMILES:   | CC/C=CC/C=CC/C=CC/C=CC/C=CCCCC(=O)O |
First Find Year:   | |
Max Developmental Stage:   | |
Synthetic Gene Cluster:   | BGC0000861;BGC0000862;BGC0000863;BGC0000865 ; |
Organism ID | Organism Name | Taxonomy Level | Family | SuperKingdom | Isolation Part | Collection Location | Collection Time | Reference |
---|---|---|---|---|---|---|---|---|
NPO21324 | Plantago major | Species | Plantaginaceae | Eukaryota | Whole Plant | the surroundings of Uppsala, Sweden | 1998-SEP |
PMID[11421736] |
NPO21324 | Plantago major | Species | Plantaginaceae | Eukaryota | Entire plants | the surroundings of Uppsala, Sweden | 1998-SEP |
PMID[11421736] |
NPO20338 | Mus musculus | Species | Muridae | Eukaryota |
PMID[25518943] |
|||
NPO30323 | Daphnia galeata | Species | Daphniidae | Eukaryota | Freshwater Biology,1997,38:731-738 | |||
NPO4573 | Mortierella alpina | Species | Mortierellaceae | Eukaryota |
PMID[9668087] |
|||
NPO19467 | Aeglopsis chevalieri | Species | Rutaceae | Eukaryota | UNPD* | |||
NPO8860 | Hippospongia equina | Species | Spongiidae | Eukaryota | UNPD* | |||
NPO21060 | Hydnocarpus annamensis | Species | Achariaceae | Eukaryota | UNPD* | |||
NPO29577 | Arecae semen | NA | NA | NA | TCMSP* | |||
NPO22715 | Alpinia oxyphylla | Species | Zingiberaceae | Eukaryota | TM-MC* | |||
NPO25443 | Citrus reticulata | Species | Rutaceae | Eukaryota | TM-MC* | |||
NPO10082 | Citrus unshiu | Species | Rutaceae | Eukaryota | TM-MC* | |||
NPO21275 | Phoenix paludosa | Species | Arecaceae | Eukaryota | UNPD* | |||
NPO1797 | Homo sapiens | Species | Hominidae | Eukaryota | blood |
PMID[20671299] |
Target ID | Target Type | Target Name | Target Organism | Activity Type | Activity Relation | Value | Unit | Reference |
---|---|---|---|---|---|---|---|---|
NPT191 | Organism | Hepatitis C virus | Hepatitis C virus | EC50 | = | 36200 | nM | 17420205 |
NPT2 | Others | Unspecified | Ratio IC50 | = | 0.5 | 11421736 | ||
NPT325 | Individual Protein | Cyclooxygenase-2 | Ovis aries | IC50 | = | 7100 | nM | 11421736 |
NPT1665 | Individual Protein | Cyclooxygenase-1 | Bos taurus | IC50 | = | 13000 | nM | 11421736 |
NPT677 | Individual Protein | Coagulation factor III | Homo sapiens | IC50 | = | 78000 | nM | 9834151 |
NPT863 | Individual Protein | Trypsin | Sus scrofa | IC50 | > | 200000 | nM | 9834151 |
NPT2 | Others | Unspecified | IC50 | = | 300 | nM | 18459759 | |
NPT441 | Individual Protein | Cytochrome P450 19A1 | Homo sapiens | Activity | = | 30.2 | % | 16643058 |
NPT441 | Individual Protein | Cytochrome P450 19A1 | Homo sapiens | IC50 | = | 53200 | nM | 16643058 |
NPT441 | Individual Protein | Cytochrome P450 19A1 | Homo sapiens | Activity | = | 137.6 | % | 16643058 |
NPT1038 | Individual Protein | Histone-lysine N-methyltransferase MLL | Homo sapiens | Potency | = | 50118.7 | nM | PubChem BioAssay data set |
NPT94 | Individual Protein | Aldehyde dehydrogenase 1A1 | Homo sapiens | Potency | = | 39810.7 | nM | PubChem BioAssay data set |
NPT53 | Individual Protein | 4'-phosphopantetheinyl transferase ffp | Bacillus subtilis | Potency | = | 70794.6 | nM | PubChem BioAssay data set |
NPT53 | Individual Protein | 4'-phosphopantetheinyl transferase ffp | Bacillus subtilis | Potency | = | 89125.1 | nM | PubChem BioAssay data set |
NPT5 | Individual Protein | Histone-lysine N-methyltransferase, H3 lysine-9 specific 3 | Homo sapiens | Potency | 5011.9 | nM | PubChem BioAssay data set | |
NPT198 | Individual Protein | Vitamin D receptor | Homo sapiens | Potency | 39810.7 | nM | PubChem BioAssay data set | |
NPT698 | Individual Protein | Regulator of G-protein signaling 4 | Homo sapiens | Potency | 8436.8 | nM | PubChem BioAssay data set | |
NPT199 | Individual Protein | DNA polymerase kappa | Homo sapiens | Potency | 11220.2 | nM | PubChem BioAssay data set | |
NPT444 | Individual Protein | Ubiquitin carboxyl-terminal hydrolase 1 | Homo sapiens | Potency | 79432.8 | nM | PubChem BioAssay data set | |
NPT113 | Cell Line | RAW264.7 | Mus musculus | LD50 | > | 0.01 | nM | 21903399 |
NPT99 | Individual Protein | Peroxisome proliferator-activated receptor gamma | Homo sapiens | Kd | = | 2000 | nM | 22260081 |
NPT100 | Individual Protein | Glutaminase kidney isoform, mitochondrial | Homo sapiens | Potency | 31622.8 | nM | PubChem BioAssay data set | |
NPT784 | Cell Line | MDA-MB-468 | Homo sapiens | EC50 | > | 100000 | nM | 22822908 |
NPT784 | Cell Line | MDA-MB-468 | Homo sapiens | IC50 | > | 100000 | nM | 22822908 |
NPT866 | Individual Protein | Peroxisome proliferator-activated receptor alpha | Homo sapiens | IC50 | = | 1100 | nM | 10.1007/s00044-008-9102-7 |
NPT106 | Individual Protein | Peroxisome proliferator-activated receptor delta | Homo sapiens | IC50 | = | 4000 | nM | 10.1007/s00044-012-0285-6 |
NPT99 | Individual Protein | Peroxisome proliferator-activated receptor gamma | Homo sapiens | IC50 | = | 1600 | nM | 10.1007/s00044-012-0285-6 |
NPT866 | Individual Protein | Peroxisome proliferator-activated receptor alpha | Homo sapiens | IC50 | = | 1100 | nM | 10.1007/s00044-012-0285-6 |
NPT2 | Others | Unspecified | Potency | 23715 | nM | PubChem BioAssay data set | ||
NPT2 | Others | Unspecified | Potency | 33498.3 | nM | PubChem BioAssay data set | ||
NPT4030 | Individual Protein | Oxoeicosanoid receptor 1 | Homo sapiens | IC50 | = | 2000 | nM | 24351031 |
NPT153 | Individual Protein | Androgen Receptor | Homo sapiens | Potency | 26832.5 | nM | PubChem BioAssay data set | |
NPT2 | Others | Unspecified | Potency | 33491.5 | nM | PubChem BioAssay data set | ||
NPT2 | Others | Unspecified | Potency | 10682.2 | nM | PubChem BioAssay data set |
Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient
●  The left chart: Distribution of similarity level between NPC117572 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).
Similarity Score | Similarity Level | Natural Product ID |
---|---|---|
0.9545 | High Similarity | NPC91495 |
0.9333 | High Similarity | NPC149821 |
0.9333 | High Similarity | NPC5413 |
0.913 | High Similarity | NPC59051 |
0.9111 | High Similarity | NPC207292 |
0.907 | High Similarity | NPC270796 |
0.8936 | High Similarity | NPC48162 |
0.8889 | High Similarity | NPC42304 |
0.875 | High Similarity | NPC92114 |
0.8571 | High Similarity | NPC36061 |
0.8571 | High Similarity | NPC294548 |
0.8571 | High Similarity | NPC1813 |
0.8571 | High Similarity | NPC321062 |
0.8571 | High Similarity | NPC70387 |
0.8571 | High Similarity | NPC139029 |
0.8542 | High Similarity | NPC284212 |
0.8542 | High Similarity | NPC28205 |
0.84 | Intermediate Similarity | NPC87564 |
0.84 | Intermediate Similarity | NPC85813 |
0.84 | Intermediate Similarity | NPC25417 |
0.84 | Intermediate Similarity | NPC6095 |
0.84 | Intermediate Similarity | NPC88966 |
0.84 | Intermediate Similarity | NPC322461 |
0.84 | Intermediate Similarity | NPC281972 |
0.84 | Intermediate Similarity | NPC424 |
0.84 | Intermediate Similarity | NPC32467 |
0.84 | Intermediate Similarity | NPC154245 |
0.84 | Intermediate Similarity | NPC290563 |
0.84 | Intermediate Similarity | NPC261831 |
0.8367 | Intermediate Similarity | NPC281245 |
0.8367 | Intermediate Similarity | NPC129458 |
0.8367 | Intermediate Similarity | NPC303765 |
0.8235 | Intermediate Similarity | NPC473863 |
0.8235 | Intermediate Similarity | NPC274290 |
0.82 | Intermediate Similarity | NPC10081 |
0.82 | Intermediate Similarity | NPC225066 |
0.8077 | Intermediate Similarity | NPC327388 |
0.8077 | Intermediate Similarity | NPC187777 |
0.8077 | Intermediate Similarity | NPC325977 |
0.8077 | Intermediate Similarity | NPC18951 |
0.8077 | Intermediate Similarity | NPC477201 |
0.8077 | Intermediate Similarity | NPC179764 |
0.7959 | Intermediate Similarity | NPC224227 |
0.7925 | Intermediate Similarity | NPC225929 |
0.7925 | Intermediate Similarity | NPC323597 |
0.7925 | Intermediate Similarity | NPC323436 |
0.7925 | Intermediate Similarity | NPC211752 |
0.7925 | Intermediate Similarity | NPC323498 |
0.7885 | Intermediate Similarity | NPC45626 |
0.7885 | Intermediate Similarity | NPC54766 |
0.78 | Intermediate Similarity | NPC178586 |
0.78 | Intermediate Similarity | NPC262968 |
0.7778 | Intermediate Similarity | NPC329819 |
0.7692 | Intermediate Similarity | NPC137538 |
0.7647 | Intermediate Similarity | NPC477779 |
0.7636 | Intermediate Similarity | NPC329249 |
0.7636 | Intermediate Similarity | NPC329550 |
0.7636 | Intermediate Similarity | NPC106851 |
0.7636 | Intermediate Similarity | NPC274927 |
0.7636 | Intermediate Similarity | NPC322002 |
0.7551 | Intermediate Similarity | NPC180534 |
0.7547 | Intermediate Similarity | NPC67367 |
0.7547 | Intermediate Similarity | NPC52264 |
0.75 | Intermediate Similarity | NPC251042 |
0.75 | Intermediate Similarity | NPC122521 |
0.75 | Intermediate Similarity | NPC328311 |
0.75 | Intermediate Similarity | NPC139545 |
0.75 | Intermediate Similarity | NPC243532 |
0.75 | Intermediate Similarity | NPC309606 |
0.75 | Intermediate Similarity | NPC174447 |
0.75 | Intermediate Similarity | NPC327112 |
0.75 | Intermediate Similarity | NPC81896 |
0.75 | Intermediate Similarity | NPC321919 |
0.75 | Intermediate Similarity | NPC235242 |
0.75 | Intermediate Similarity | NPC39633 |
0.7455 | Intermediate Similarity | NPC267817 |
0.7451 | Intermediate Similarity | NPC477777 |
0.74 | Intermediate Similarity | NPC163345 |
0.7368 | Intermediate Similarity | NPC201939 |
0.7368 | Intermediate Similarity | NPC321838 |
0.7368 | Intermediate Similarity | NPC320305 |
0.7368 | Intermediate Similarity | NPC40082 |
0.7368 | Intermediate Similarity | NPC328776 |
0.7308 | Intermediate Similarity | NPC18357 |
0.7241 | Intermediate Similarity | NPC322457 |
0.7222 | Intermediate Similarity | NPC223677 |
0.7222 | Intermediate Similarity | NPC477984 |
0.7222 | Intermediate Similarity | NPC474672 |
0.7222 | Intermediate Similarity | NPC200845 |
0.7222 | Intermediate Similarity | NPC228473 |
0.7222 | Intermediate Similarity | NPC128061 |
0.7222 | Intermediate Similarity | NPC28779 |
0.7222 | Intermediate Similarity | NPC10316 |
0.717 | Intermediate Similarity | NPC71761 |
0.7143 | Intermediate Similarity | NPC34416 |
0.7119 | Intermediate Similarity | NPC328089 |
0.7119 | Intermediate Similarity | NPC470320 |
0.7119 | Intermediate Similarity | NPC68343 |
0.7115 | Intermediate Similarity | NPC470410 |
0.7115 | Intermediate Similarity | NPC470412 |
0.7111 | Intermediate Similarity | NPC34873 |
0.7111 | Intermediate Similarity | NPC155880 |
0.7111 | Intermediate Similarity | NPC40434 |
0.7111 | Intermediate Similarity | NPC92863 |
0.7069 | Intermediate Similarity | NPC174560 |
0.7069 | Intermediate Similarity | NPC125312 |
0.7069 | Intermediate Similarity | NPC113293 |
0.7059 | Intermediate Similarity | NPC207815 |
0.7037 | Intermediate Similarity | NPC474127 |
0.7037 | Intermediate Similarity | NPC87394 |
0.7018 | Intermediate Similarity | NPC322186 |
0.7018 | Intermediate Similarity | NPC318306 |
0.7 | Intermediate Similarity | NPC255863 |
0.7 | Intermediate Similarity | NPC326268 |
0.7 | Intermediate Similarity | NPC478098 |
0.7 | Intermediate Similarity | NPC478099 |
0.7 | Intermediate Similarity | NPC476657 |
0.7 | Intermediate Similarity | NPC308331 |
0.7 | Intermediate Similarity | NPC318420 |
0.7 | Intermediate Similarity | NPC136164 |
0.7 | Intermediate Similarity | NPC317881 |
0.7 | Intermediate Similarity | NPC245947 |
0.7 | Intermediate Similarity | NPC476654 |
0.7 | Intermediate Similarity | NPC320642 |
0.7 | Intermediate Similarity | NPC476655 |
0.7 | Intermediate Similarity | NPC323045 |
0.6981 | Remote Similarity | NPC216407 |
0.6949 | Remote Similarity | NPC68110 |
0.6939 | Remote Similarity | NPC6963 |
0.6939 | Remote Similarity | NPC304079 |
0.6923 | Remote Similarity | NPC225974 |
0.6885 | Remote Similarity | NPC478101 |
0.6885 | Remote Similarity | NPC476659 |
0.6885 | Remote Similarity | NPC476656 |
0.6863 | Remote Similarity | NPC216130 |
0.6852 | Remote Similarity | NPC284224 |
0.6852 | Remote Similarity | NPC217188 |
0.6842 | Remote Similarity | NPC325734 |
0.6842 | Remote Similarity | NPC478096 |
0.6833 | Remote Similarity | NPC226592 |
0.6809 | Remote Similarity | NPC123357 |
0.6792 | Remote Similarity | NPC15129 |
0.6792 | Remote Similarity | NPC477458 |
0.6792 | Remote Similarity | NPC470411 |
0.6792 | Remote Similarity | NPC43053 |
0.6786 | Remote Similarity | NPC472808 |
0.6786 | Remote Similarity | NPC324224 |
0.678 | Remote Similarity | NPC477829 |
0.6774 | Remote Similarity | NPC22101 |
0.6774 | Remote Similarity | NPC478100 |
0.6774 | Remote Similarity | NPC330426 |
0.6774 | Remote Similarity | NPC478097 |
0.6774 | Remote Similarity | NPC127091 |
0.6774 | Remote Similarity | NPC271921 |
0.6774 | Remote Similarity | NPC99619 |
0.6774 | Remote Similarity | NPC49863 |
0.6774 | Remote Similarity | NPC104537 |
0.6774 | Remote Similarity | NPC148192 |
0.6774 | Remote Similarity | NPC26500 |
0.6739 | Remote Similarity | NPC180840 |
0.6731 | Remote Similarity | NPC135698 |
0.6731 | Remote Similarity | NPC267110 |
0.6727 | Remote Similarity | NPC300121 |
0.6724 | Remote Similarity | NPC478095 |
0.6721 | Remote Similarity | NPC323477 |
0.6667 | Remote Similarity | NPC283502 |
0.6667 | Remote Similarity | NPC170167 |
0.6667 | Remote Similarity | NPC472445 |
0.6667 | Remote Similarity | NPC324981 |
0.6667 | Remote Similarity | NPC161366 |
0.6667 | Remote Similarity | NPC477776 |
0.6667 | Remote Similarity | NPC151919 |
0.6667 | Remote Similarity | NPC473559 |
0.6667 | Remote Similarity | NPC273508 |
0.6667 | Remote Similarity | NPC48218 |
0.6667 | Remote Similarity | NPC221250 |
0.6667 | Remote Similarity | NPC87137 |
0.6667 | Remote Similarity | NPC476614 |
0.6667 | Remote Similarity | NPC209327 |
0.6667 | Remote Similarity | NPC141481 |
0.6613 | Remote Similarity | NPC142423 |
0.6613 | Remote Similarity | NPC308294 |
0.6613 | Remote Similarity | NPC328653 |
0.661 | Remote Similarity | NPC143857 |
0.661 | Remote Similarity | NPC229252 |
0.6604 | Remote Similarity | NPC27264 |
0.6562 | Remote Similarity | NPC317583 |
0.6562 | Remote Similarity | NPC143396 |
0.6562 | Remote Similarity | NPC236208 |
0.6557 | Remote Similarity | NPC476658 |
0.6557 | Remote Similarity | NPC234767 |
0.6552 | Remote Similarity | NPC469373 |
0.6552 | Remote Similarity | NPC254095 |
0.6552 | Remote Similarity | NPC471619 |
0.6531 | Remote Similarity | NPC187922 |
0.6522 | Remote Similarity | NPC158179 |
0.6522 | Remote Similarity | NPC185839 |
0.6508 | Remote Similarity | NPC475443 |
0.6508 | Remote Similarity | NPC25298 |
0.6508 | Remote Similarity | NPC60120 |
Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.
●  The left chart: Distribution of similarity level between NPC117572 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).
Similarity Score | Similarity Level | Drug ID | Developmental Stage |
---|---|---|---|
1.0 | High Similarity | NPD4222 | Approved |
0.9333 | High Similarity | NPD3173 | Approved |
0.9091 | High Similarity | NPD39 | Approved |
0.907 | High Similarity | NPD5326 | Phase 3 |
0.8667 | High Similarity | NPD3174 | Discontinued |
0.8571 | High Similarity | NPD3172 | Approved |
0.84 | Intermediate Similarity | NPD4266 | Approved |
0.84 | Intermediate Similarity | NPD3195 | Phase 2 |
0.84 | Intermediate Similarity | NPD3194 | Approved |
0.84 | Intermediate Similarity | NPD3196 | Approved |
0.8298 | Intermediate Similarity | NPD5343 | Approved |
0.78 | Intermediate Similarity | NPD28 | Approved |
0.78 | Intermediate Similarity | NPD29 | Approved |
0.766 | Intermediate Similarity | NPD6096 | Approved |
0.766 | Intermediate Similarity | NPD6097 | Approved |
0.7551 | Intermediate Similarity | NPD622 | Approved |
0.75 | Intermediate Similarity | NPD4246 | Clinical (unspecified phase) |
0.7455 | Intermediate Similarity | NPD6109 | Phase 1 |
0.7119 | Intermediate Similarity | NPD3197 | Phase 1 |
0.7059 | Intermediate Similarity | NPD4220 | Pre-registration |
0.6792 | Remote Similarity | NPD6927 | Phase 3 |
0.6774 | Remote Similarity | NPD4247 | Clinical (unspecified phase) |
0.6596 | Remote Similarity | NPD5783 | Phase 3 |
0.6471 | Remote Similarity | NPD4265 | Approved |
0.64 | Remote Similarity | NPD9411 | Phase 1 |
0.614 | Remote Similarity | NPD8971 | Approved |
0.6 | Remote Similarity | NPD2270 | Approved |
0.5918 | Remote Similarity | NPD9450 | Approved |
0.5918 | Remote Similarity | NPD633 | Phase 3 |
0.5918 | Remote Similarity | NPD9448 | Phase 2 |
0.5918 | Remote Similarity | NPD77 | Approved |
0.5873 | Remote Similarity | NPD2664 | Clinical (unspecified phase) |
0.587 | Remote Similarity | NPD8857 | Approved |
0.5846 | Remote Similarity | NPD7331 | Phase 2 |
0.5833 | Remote Similarity | NPD5784 | Clinical (unspecified phase) |
0.5833 | Remote Similarity | NPD3732 | Approved |
0.5833 | Remote Similarity | NPD4268 | Approved |
0.5833 | Remote Similarity | NPD4271 | Approved |
0.5714 | Remote Similarity | NPD4191 | Approved |
0.5714 | Remote Similarity | NPD4194 | Approved |
0.5714 | Remote Similarity | NPD4192 | Approved |
0.5714 | Remote Similarity | NPD4193 | Approved |
0.5694 | Remote Similarity | NPD4756 | Discovery |
0.5676 | Remote Similarity | NPD4252 | Approved |
0.5676 | Remote Similarity | NPD4819 | Approved |
0.5676 | Remote Similarity | NPD5368 | Approved |
0.5676 | Remote Similarity | NPD5790 | Clinical (unspecified phase) |
0.5676 | Remote Similarity | NPD4821 | Approved |
0.5676 | Remote Similarity | NPD4820 | Approved |
0.5676 | Remote Similarity | NPD4822 | Approved |
0.566 | Remote Similarity | NPD3199 | Clinical (unspecified phase) |
0.56 | Remote Similarity | NPD5369 | Approved |
0.56 | Remote Similarity | NPD9655 | Approved |
PubChem CID   | 446284 |
ChEMBL   | CHEMBL460026 |
ZINC   |
Molecular Weight:   | 302.22 |
ALogP:   | 2.1145 |
MLogP:   | 3.44 |
XLogP:   | 8.022 |
# Rotatable Bonds:   | 15 |
Polar Surface Area:   | 37.3 |
# H-Bond Aceptor:   | 2 |
# H-Bond Donor:   | 1 |
# Rings:   | 0 |
# Heavy Atoms:   | 22 |