Natural Product: NPC270796

Natural Product ID:  NPC270796
Common Name:   Doconexent
IUPAC Name:   (4Z,7Z,10Z,13Z,16Z,19Z)-docosa-4,7,10,13,16,19-hexaenoic acid
Synonyms:   Doconexent; Omega-3 marine triglycerides
Molecular Formula:   C22H32O2
Standard InCHIKey:  MBMBGCFOFBJSGT-KUBAVDMBSA-N
Standard InCHI:  InChI=1S/C22H32O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20-21-22(23)24/h3-4,6-7,9-10,12-13,15-16,18-19H,2,5,8,11,14,17,20-21H2,1H3,(H,23,24)/b4-3-,7-6-,10-9-,13-12-,16-15-,19-18-
Canonical SMILES:  CC/C=CC/C=CC/C=CC/C=CC/C=CC/C=CCCC(=O)O
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO21324 Plantago major Species Plantaginaceae Eukaryota Whole Plant the surroundings of Uppsala, Sweden 1998-SEP PMID[11421736]
NPO21324 Plantago major Species Plantaginaceae Eukaryota Entire plants the surroundings of Uppsala, Sweden 1998-SEP PMID[11421736]
NPO1797 Homo sapiens Species Hominidae Eukaryota cerebrospinal fluid PMID[12967724]
NPO20338 Mus musculus Species Muridae Eukaryota PMID[25518943]
NPO30812 Rebecca salina Species Pavlovaceae Eukaryota PMID[17291553]
NPO31114 Daphnia tenebrosa Species Daphniidae Eukaryota Freshwater Biology,2006,51:1987-1998
NPO28093 Gelidium sesquipedale Species Gelidiaceae Eukaryota UNPD*
NPO28872 Cacia confusa NA NA NA UNPD*
NPO25672 Hypnum plumaeforme Species Hypnaceae Eukaryota UNPD*
NPO28486 Salvia viridis Species Lamiaceae Eukaryota UNPD*
NPO28602 Geniostoma antherotrichum Species Loganiaceae Eukaryota UNPD*
NPO6111 Amaryllis minuta Species Amaryllidaceae Eukaryota UNPD*
NPO28637 Phlomis amanica Species Lamiaceae Eukaryota UNPD*
NPO28677 Pisonia umbellifera Species Nyctaginaceae Eukaryota UNPD*
NPO4603 Eriostemon trachyphyllus Species Rutaceae Eukaryota UNPD*
NPO28307 Rumex abyssinicus Species Polygonaceae Eukaryota UNPD*
NPO28813 Xylocarpus granatum Species Meliaceae Eukaryota UNPD*
NPO18311 Carthamus tinctorius Species Asteraceae Eukaryota TM-MC*
NPO25443 Citrus reticulata Species Rutaceae Eukaryota TM-MC*
NPO10082 Citrus unshiu Species Rutaceae Eukaryota TM-MC*
NPO15173 Concha meretricis seu cyclinae NA NA NA TCMID*
NPO28929 Penicillium jensenii Species Aspergillaceae Eukaryota UNPD*
NPO27982 Brevoortia tyrannus Species Clupeidae Eukaryota UNPD*
NPO28340 Coleus rehneltianus Species Lamiaceae Eukaryota UNPD*
NPO28908 Pelagomonas calceolata Species NA Eukaryota UNPD*
NPO1797 Homo sapiens Species Hominidae Eukaryota PMID[18633173]
NPO1797 Homo sapiens Species Hominidae Eukaryota blood PMID[18633173]
NPO1797 Homo sapiens Species Hominidae Eukaryota urine PMID[14643447]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT99 Individual Protein Peroxisome proliferator-activated receptor gamma Homo sapiens Activity = 1.2 15664804
NPT191 Organism Hepatitis C virus Hepatitis C virus EC50 = 37000 nM 17420205
NPT2 Others Unspecified Activity = 15 % 17535898
NPT2 Others Unspecified Activity = 65 % 17535898
NPT2 Others Unspecified Ratio IC50 = 0.7 11421736
NPT325 Individual Protein Cyclooxygenase-2 Ovis aries IC50 = 9800 nM 11421736
NPT1665 Individual Protein Cyclooxygenase-1 Bos taurus IC50 = 15000 nM 11421736
NPT137 Cell Line L1210 Mus musculus IC50 = 13 nM 18508273
NPT441 Individual Protein Cytochrome P450 19A1 Homo sapiens Activity = 12.4 % 16643058
NPT441 Individual Protein Cytochrome P450 19A1 Homo sapiens IC50 = 33200 nM 16643058
NPT441 Individual Protein Cytochrome P450 19A1 Homo sapiens Activity = 98.2 % 16643058
NPT51 Individual Protein Microtubule-associated protein tau Homo sapiens Potency = 11220.2 nM PubChem BioAssay data set
NPT51 Individual Protein Microtubule-associated protein tau Homo sapiens Potency = 15848.9 nM PubChem BioAssay data set
NPT94 Individual Protein Aldehyde dehydrogenase 1A1 Homo sapiens Potency = 39810.7 nM PubChem BioAssay data set
NPT94 Individual Protein Aldehyde dehydrogenase 1A1 Homo sapiens Potency = 22387.2 nM PubChem BioAssay data set
NPT53 Individual Protein 4'-phosphopantetheinyl transferase ffp Bacillus subtilis Potency = 79432.8 nM PubChem BioAssay data set
NPT583 Individual Protein Inositol monophosphatase 1 Rattus norvegicus Potency = 31622.8 nM PubChem BioAssay data set
NPT51 Individual Protein Microtubule-associated protein tau Homo sapiens Potency = 25118.9 nM PubChem BioAssay data set
NPT5 Individual Protein Histone-lysine N-methyltransferase, H3 lysine-9 specific 3 Homo sapiens Potency 2818.4 nM PubChem BioAssay data set
NPT5 Individual Protein Histone-lysine N-methyltransferase, H3 lysine-9 specific 3 Homo sapiens Potency 7079.5 nM PubChem BioAssay data set
NPT5 Individual Protein Histone-lysine N-methyltransferase, H3 lysine-9 specific 3 Homo sapiens Potency 25118.9 nM PubChem BioAssay data set
NPT533 Protein-Protein Interaction Runt-related transcription factor 1/Core-binding factor subunit beta Homo sapiens Potency 39810.7 nM PubChem BioAssay data set
NPT82 Cell Line MDA-MB-231 Homo sapiens Activity = 90.3 % 20153203
NPT82 Cell Line MDA-MB-231 Homo sapiens Activity = 87.6 % 20153203
NPT82 Cell Line MDA-MB-231 Homo sapiens Activity = 2.1 % 20153203
NPT82 Cell Line MDA-MB-231 Homo sapiens Activity = 1.8 % 20153203
NPT82 Cell Line MDA-MB-231 Homo sapiens Activity = 7.6 % 20153203
NPT82 Cell Line MDA-MB-231 Homo sapiens Activity = 10.7 % 20153203
NPT198 Individual Protein Vitamin D receptor Homo sapiens Potency 44668.4 nM PubChem BioAssay data set
NPT198 Individual Protein Vitamin D receptor Homo sapiens Potency 28183.8 nM PubChem BioAssay data set
NPT198 Individual Protein Vitamin D receptor Homo sapiens Potency 31622.8 nM PubChem BioAssay data set
NPT6 Organism Plasmodium falciparum Plasmodium falciparum Potency 3380.8 nM PubChem BioAssay data set
NPT199 Individual Protein DNA polymerase kappa Homo sapiens Potency 10000 nM PubChem BioAssay data set
NPT444 Individual Protein Ubiquitin carboxyl-terminal hydrolase 1 Homo sapiens Potency 50118.7 nM PubChem BioAssay data set
NPT113 Cell Line RAW264.7 Mus musculus LD50 > 0.01 nM 21903399
NPT2 Others Unspecified Potency 2279.4 nM PubChem BioAssay data set
NPT10 Individual Protein Geminin Homo sapiens Potency 33498.3 nM PubChem BioAssay data set
NPT100 Individual Protein Glutaminase kidney isoform, mitochondrial Homo sapiens Potency 25118.9 nM PubChem BioAssay data set
NPT869 Individual Protein Free fatty acid receptor 1 Homo sapiens EC50 = 36000 nM 24900539
NPT2 Others Unspecified Potency 29855.4 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency 20596.2 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency 29092.9 nM PubChem BioAssay data set
NPT4030 Individual Protein Oxoeicosanoid receptor 1 Homo sapiens IC50 = 2000 nM 24351031
NPT82 Cell Line MDA-MB-231 Homo sapiens Activity = 5.6 % 24556504
NPT82 Cell Line MDA-MB-231 Homo sapiens Activity = 1.9 % 24556504
NPT82 Cell Line MDA-MB-231 Homo sapiens Activity = 92.5 % 24556504
NPT82 Cell Line MDA-MB-231 Homo sapiens Activity = 2.4 % 24556504
NPT82 Cell Line MDA-MB-231 Homo sapiens Activity = 1.1 % 24556504
NPT82 Cell Line MDA-MB-231 Homo sapiens Activity = 96.5 % 24556504
NPT82 Cell Line MDA-MB-231 Homo sapiens Activity = 2.9 % 24556504
NPT82 Cell Line MDA-MB-231 Homo sapiens Activity = 2.6 % 24556504
NPT82 Cell Line MDA-MB-231 Homo sapiens Activity = 94.5 % 24556504
NPT82 Cell Line MDA-MB-231 Homo sapiens Activity = 16.2 % 24556504
NPT82 Cell Line MDA-MB-231 Homo sapiens Activity = 33 % 24556504
NPT82 Cell Line MDA-MB-231 Homo sapiens Activity = 50.8 % 24556504
NPT82 Cell Line MDA-MB-231 Homo sapiens Activity = 17.5 % 24556504
NPT82 Cell Line MDA-MB-231 Homo sapiens Activity = 33.8 % 24556504
NPT82 Cell Line MDA-MB-231 Homo sapiens Activity = 48.7 % 24556504
NPT2 Others Unspecified Potency 21313.8 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency 33491.5 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency 26603.2 nM PubChem BioAssay data set
NPT546 Individual Protein Retinoid X receptor alpha Homo sapiens ED50 = 0.05 nM 24959987
NPT869 Individual Protein Free fatty acid receptor 1 Homo sapiens EC50 = 11700 nM 27326330

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC270796 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9091 High Similarity NPC91495
0.907 High Similarity NPC117572
0.8696 High Similarity NPC59051
0.8478 Intermediate Similarity NPC5413
0.8478 Intermediate Similarity NPC149821
0.8333 Intermediate Similarity NPC92114
0.8261 Intermediate Similarity NPC207292
0.8163 Intermediate Similarity NPC70387
0.8163 Intermediate Similarity NPC321062
0.8125 Intermediate Similarity NPC48162
0.8043 Intermediate Similarity NPC42304
0.8 Intermediate Similarity NPC154245
0.8 Intermediate Similarity NPC87564
0.8 Intermediate Similarity NPC261831
0.8 Intermediate Similarity NPC88966
0.8 Intermediate Similarity NPC32467
0.8 Intermediate Similarity NPC6095
0.8 Intermediate Similarity NPC25417
0.8 Intermediate Similarity NPC424
0.8 Intermediate Similarity NPC290563
0.8 Intermediate Similarity NPC85813
0.8 Intermediate Similarity NPC281972
0.7959 Intermediate Similarity NPC477779
0.78 Intermediate Similarity NPC139029
0.78 Intermediate Similarity NPC294548
0.78 Intermediate Similarity NPC36061
0.78 Intermediate Similarity NPC1813
0.7755 Intermediate Similarity NPC178586
0.7755 Intermediate Similarity NPC284212
0.7755 Intermediate Similarity NPC477777
0.7755 Intermediate Similarity NPC28205
0.7692 Intermediate Similarity NPC477201
0.7692 Intermediate Similarity NPC18951
0.7647 Intermediate Similarity NPC322461
0.76 Intermediate Similarity NPC129458
0.76 Intermediate Similarity NPC281245
0.76 Intermediate Similarity NPC303765
0.7547 Intermediate Similarity NPC323597
0.7547 Intermediate Similarity NPC323498
0.7547 Intermediate Similarity NPC323436
0.7547 Intermediate Similarity NPC211752
0.75 Intermediate Similarity NPC274290
0.75 Intermediate Similarity NPC473863
0.7451 Intermediate Similarity NPC225066
0.7451 Intermediate Similarity NPC10081
0.74 Intermediate Similarity NPC262968
0.7358 Intermediate Similarity NPC187777
0.7358 Intermediate Similarity NPC325977
0.7358 Intermediate Similarity NPC327388
0.7358 Intermediate Similarity NPC179764
0.7308 Intermediate Similarity NPC137538
0.7292 Intermediate Similarity NPC308331
0.7273 Intermediate Similarity NPC106851
0.7273 Intermediate Similarity NPC329249
0.7273 Intermediate Similarity NPC322002
0.7273 Intermediate Similarity NPC274927
0.7273 Intermediate Similarity NPC322186
0.7222 Intermediate Similarity NPC225929
0.72 Intermediate Similarity NPC224227
0.717 Intermediate Similarity NPC52264
0.717 Intermediate Similarity NPC54766
0.717 Intermediate Similarity NPC45626
0.7143 Intermediate Similarity NPC328311
0.7143 Intermediate Similarity NPC81896
0.7143 Intermediate Similarity NPC327112
0.7143 Intermediate Similarity NPC243532
0.7143 Intermediate Similarity NPC321919
0.7115 Intermediate Similarity NPC309606
0.7115 Intermediate Similarity NPC139545
0.7115 Intermediate Similarity NPC39633
0.7111 Intermediate Similarity NPC123357
0.7091 Intermediate Similarity NPC329819
0.7059 Intermediate Similarity NPC43053
0.7018 Intermediate Similarity NPC201939
0.7018 Intermediate Similarity NPC321838
0.7018 Intermediate Similarity NPC328776
0.7018 Intermediate Similarity NPC320305
0.6981 Remote Similarity NPC474127
0.6964 Remote Similarity NPC329550
0.6957 Remote Similarity NPC221250
0.6939 Remote Similarity NPC477776
0.6939 Remote Similarity NPC87137
0.6909 Remote Similarity NPC283502
0.6875 Remote Similarity NPC6963
0.6875 Remote Similarity NPC304079
0.6863 Remote Similarity NPC225974
0.6852 Remote Similarity NPC28779
0.6852 Remote Similarity NPC128061
0.6852 Remote Similarity NPC67367
0.6852 Remote Similarity NPC200845
0.6852 Remote Similarity NPC10316
0.6852 Remote Similarity NPC228473
0.6852 Remote Similarity NPC223677
0.6842 Remote Similarity NPC251042
0.6842 Remote Similarity NPC122521
0.6842 Remote Similarity NPC174447
0.6842 Remote Similarity NPC235242
0.6809 Remote Similarity NPC187922
0.68 Remote Similarity NPC180534
0.6792 Remote Similarity NPC284224
0.6786 Remote Similarity NPC267817
0.6786 Remote Similarity NPC254095
0.6786 Remote Similarity NPC325734
0.678 Remote Similarity NPC68343
0.678 Remote Similarity NPC476658
0.678 Remote Similarity NPC328089
0.6739 Remote Similarity NPC8270
0.6731 Remote Similarity NPC477458
0.6724 Remote Similarity NPC125312
0.6724 Remote Similarity NPC40082
0.6724 Remote Similarity NPC174560
0.6667 Remote Similarity NPC136164
0.6667 Remote Similarity NPC155880
0.6667 Remote Similarity NPC476654
0.6667 Remote Similarity NPC300121
0.6667 Remote Similarity NPC476655
0.6667 Remote Similarity NPC318306
0.6667 Remote Similarity NPC180840
0.6667 Remote Similarity NPC318420
0.6667 Remote Similarity NPC255863
0.6667 Remote Similarity NPC92863
0.6667 Remote Similarity NPC323045
0.6667 Remote Similarity NPC320642
0.6667 Remote Similarity NPC317881
0.6667 Remote Similarity NPC226511
0.6667 Remote Similarity NPC245947
0.6667 Remote Similarity NPC163345
0.6667 Remote Similarity NPC267110
0.6667 Remote Similarity NPC207815
0.6667 Remote Similarity NPC476657
0.6667 Remote Similarity NPC87394
0.6667 Remote Similarity NPC326268
0.6667 Remote Similarity NPC40434
0.6667 Remote Similarity NPC477778
0.6667 Remote Similarity NPC34873
0.6667 Remote Similarity NPC135698
0.661 Remote Similarity NPC322457
0.6607 Remote Similarity NPC293437
0.6607 Remote Similarity NPC249850
0.6607 Remote Similarity NPC472445
0.6604 Remote Similarity NPC151919
0.6604 Remote Similarity NPC18357
0.6557 Remote Similarity NPC478101
0.6557 Remote Similarity NPC476656
0.6557 Remote Similarity NPC476659
0.6545 Remote Similarity NPC477984
0.6545 Remote Similarity NPC474672
0.6538 Remote Similarity NPC27264
0.6538 Remote Similarity NPC221467
0.65 Remote Similarity NPC470320
0.6491 Remote Similarity NPC471619
0.6491 Remote Similarity NPC34416
0.6491 Remote Similarity NPC223679
0.6481 Remote Similarity NPC477781
0.6481 Remote Similarity NPC477780
0.6481 Remote Similarity NPC71761
0.6481 Remote Similarity NPC217188
0.6458 Remote Similarity NPC57923
0.6452 Remote Similarity NPC478100
0.6452 Remote Similarity NPC271921
0.6452 Remote Similarity NPC99619
0.6452 Remote Similarity NPC478097
0.6452 Remote Similarity NPC22101
0.6452 Remote Similarity NPC330426
0.6452 Remote Similarity NPC26500
0.6452 Remote Similarity NPC104537
0.6452 Remote Similarity NPC127091
0.6452 Remote Similarity NPC49863
0.6452 Remote Similarity NPC148192
0.6444 Remote Similarity NPC185839
0.6441 Remote Similarity NPC113293
0.6441 Remote Similarity NPC273614
0.6429 Remote Similarity NPC324224
0.6429 Remote Similarity NPC472808
0.6415 Remote Similarity NPC470412
0.6415 Remote Similarity NPC148056
0.6415 Remote Similarity NPC470410
0.64 Remote Similarity NPC140501
0.64 Remote Similarity NPC76976
0.6393 Remote Similarity NPC478099
0.6393 Remote Similarity NPC478098
0.6379 Remote Similarity NPC222852
0.6379 Remote Similarity NPC82465
0.6349 Remote Similarity NPC324981
0.6349 Remote Similarity NPC48218
0.6349 Remote Similarity NPC141481
0.6349 Remote Similarity NPC209327
0.6349 Remote Similarity NPC473559
0.6349 Remote Similarity NPC273508
0.6346 Remote Similarity NPC15912
0.6333 Remote Similarity NPC68110
0.6333 Remote Similarity NPC316674
0.6327 Remote Similarity NPC116934
0.6316 Remote Similarity NPC135863
0.6316 Remote Similarity NPC44542
0.6316 Remote Similarity NPC268185
0.6316 Remote Similarity NPC294938
0.6316 Remote Similarity NPC129150
0.6296 Remote Similarity NPC170167
0.6296 Remote Similarity NPC216407

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC270796 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
1.0 High Similarity NPD5326 Phase 3
0.9524 High Similarity NPD39 Approved
0.907 High Similarity NPD4222 Approved
0.8478 Intermediate Similarity NPD3173 Approved
0.8409 Intermediate Similarity NPD6097 Approved
0.8409 Intermediate Similarity NPD6096 Approved
0.8 Intermediate Similarity NPD4266 Approved
0.8 Intermediate Similarity NPD3194 Approved
0.8 Intermediate Similarity NPD3195 Phase 2
0.8 Intermediate Similarity NPD3196 Approved
0.7872 Intermediate Similarity NPD5343 Approved
0.7826 Intermediate Similarity NPD3174 Discontinued
0.78 Intermediate Similarity NPD3172 Approved
0.7407 Intermediate Similarity NPD6109 Phase 1
0.74 Intermediate Similarity NPD28 Approved
0.74 Intermediate Similarity NPD29 Approved
0.7143 Intermediate Similarity NPD4246 Clinical (unspecified phase)
0.7059 Intermediate Similarity NPD6927 Phase 3
0.7 Intermediate Similarity NPD4220 Pre-registration
0.6889 Remote Similarity NPD5783 Phase 3
0.68 Remote Similarity NPD622 Approved
0.678 Remote Similarity NPD3197 Phase 1
0.6667 Remote Similarity NPD9411 Phase 1
0.6452 Remote Similarity NPD4247 Clinical (unspecified phase)
0.64 Remote Similarity NPD4265 Approved
0.5645 Remote Similarity NPD4191 Approved
0.5645 Remote Similarity NPD4194 Approved
0.5645 Remote Similarity NPD4193 Approved
0.5645 Remote Similarity NPD4192 Approved
0.56 Remote Similarity NPD2270 Approved

Structure

External Identifiers

PubChem CID   445580
ChEMBL   CHEMBL367149
ZINC  

Physicochemical Properties

Molecular Weight:  328.24
ALogP:  2.9327
MLogP:  3.66
XLogP:  8.833
# Rotatable Bonds:  16
Polar Surface Area:  37.3
# H-Bond Aceptor:  2
# H-Bond Donor:  1
# Rings:  0
# Heavy Atoms:  24

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
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